TCONS_00007602 (transcript) - C. hemisphaerica

Overview
NameTCONS_00007602
Unique NameTCONS_00007602
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length2935

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00007602 ID=TCONS_00007602|Name=TCONS_00007602|organism=Clytia hemisphaerica|type=transcript|length=2935bp
CAACAAAGCTAATTAAAACTTTTCAACTACGGTGGAGTGCTCTTTCCTCA
GTTGCGCTTCGTTACATCAGCTTTacgctaactttttttttgttgacaAA
ATAGCCTTCATAAATGGCGGACGTTTTGGCTCTCTtctgttgaaaatgtt
ttgaagaACGAAAAGAAAGATGAAACCTGGAGTTTTGATGATACGATAGA
AACTTTTTAATACTTCTAAAATATCCTATAATcttttggattttgaaaga
attattttgaatgaGACATGGTGATTTCATCGACAGAAGTTAGTGCTGTT
TCTCCAGCCATTCACTCACTTCCTCCTGAGGTCGAAGAGGGAAACAGGGA
GTACAAGCTGAAACTAGTCAATCCTACACCATCACGTGTTGAACACTTGA
TAACCCAAATGAAATGGAGGCTAAAGGAGGGTGATGGAGAGGCTATTTAC
GCTATTGGAGTTGAAGACAACGGTGTCATAAGTGGTTTGCTTCGAGACGA
GCTGGACTCGTCTCTTGAAACATTGAGTTCAATGGCAGACAGacTTGGCG
CTGAGACACACATTATAAACGAACATACTATCCCCTACCCAAACAATATG
ACACGCCATGCAGCTGAAGTCATGGTCAAGAAAATCCCTGATGAACAAGA
GtttATTGATATTCGTGTTGGGTGTATTGGTAACGTCGACGTGGGCAAAA
GTACATTACTGGGTGTATTGAGTCACGGTGATCTGGACAATGGACGTGGT
AAAGCTAGATTGAACATGTTCCGACATTTGCATGAGATACAAACTGGACG
AACTTCGAGTATCAGTCATGAAATTCTTGGTTTTGATGCTAACGGACATg
aGTTGAATTATAGCGGGTCGACAGTCGAGGAGATCTGTTCGTCTGCAAAG
AAACTGATCACCTTTCTCGACTTGGCTGGACATCACAAATACATCAAAAC
AACAATACATGGGTTGACTGGGTATTCCCCTGAGCTCGTTATGCTTCTTG
TTGCAGCTAATAGAGGCTTAGCGGGGACAACGAAGGAACATTTAGGACTT
GCGATCGCTTTGAAGATTCCCTTCTTGATCGTCATCACAAAAACAGATTT
GTGTTCGAAAGACATGATTGACCGTACTGTTCAGCAATTAGAGAAGATTT
TGAAATCACCGGGCTGTAAGAAAGTTCCAATACGTGTGGAAGATGAAAAC
GATGCGGAAACGGCCGCTGAAAGCTTCTCTAAACAGGTGACACCAATCTT
CAAAGTTTCAAGTGTTTCTGGTGAAAACTTGAACTTGCTTCGTAAATTTT
ATTTCCATCTTCCATCGTTGAGAAGTAAAATTGAACAAGATGAACTATTA
CAGTGTGCTGCTGAGTTTCAGatTGATGAAATCTTTTCGGTGCGTGAAGT
TGGACCTGTATTGGCGGGCACCCTCAAATCAGGCGTTGTGAAAGTCGGCG
ACGCCCTTCTTTTGGGGCCGATGTCGAACGGTATGTTCGAGAAAGTAGTG
GTTGCTTCCATACATCGAAACCGGACACCATGTCGTGTCATCCAGGCAGG
ACAGACTGCTTGTATCGCTCTTAGAGATAACTCACAAATCATTCCACGGA
GGGGACAGGTTTTGTTGGAAGACAAATTATCAGAGGATCCACCAAAGACT
TGTAAAACGTTCGAAGCCGATCTTTTCTTACTGTTCCATACAACgaaaat
tgcaccaaaatttcaagccacAGTACACATCGGAAACATCGTACAAACTG
TCGTCATCAAATCCATGGATCGGGCTGACTTGCGTACCGGACAGAAAGCA
CGGGTAAAGTTTGAGTTTATCGGACACCCACAATACCTTCGAAACGGTGA
TCGGATGTTCTTCAGAGAAGGGCGGTGCAAGGGCGTTGGCGAAGTTACCC
AATTCTTCGAGTACAAACATGATGATCAGACTGAATTGGCGATGCACTCT
TAACACACGCCCATATAATGATGTCATTGTCACGTGCAAAAACGAATGAC
TTTTACCGGTCACGGAAAGGTGCatggattttatttttgttgatattttt
tgtttctttgcttttttcatATCATTTTAGCGACAGAAAACCAAATTTCt
attaaagttttattttaatagTGCATATTTATAATCTTTTACTTTGCAAC
CCCACTACTTAATTATGTTTAATATTATTAGAGTATGAAAAATAgtattt
cgaaaattttactataaaaagtgaaaaaatcctAACTGCACCTTTGTAAA
AATTAGTATCTGCTTTTAGGTATTTTCATAGATACTTTACAATTTAGGTA
CTTTATTATCACCATACATCACCATATTTTAAACGACTTGTTATCAAGTC
agattttgatgtatttttggagtcattcttttgaattctttttttgtCCA
ATGCTGGTTCTTGGAAGTCAaatcttttttactttaaaatttttgctacc
caaaataaaaacaagagtCGTAATTTTGGTTAATGTAATGTTCTTTGAAT
CCTTtgtgaatttcttttttgaaaaagttaaaaaatttcttattgAGAGA
TGCATATAGTGAGAAAATTAAGcatgaaaaaaaacacagaaattTTGAAC
TTATGGTATGTGTGCTTGTAAATACGTGTTCATAGTAGGGAAAACGACTT
GTAGTAATGTGTACATAGTATATCACCATGATCAAAAAGTAGCAGTCCGG
TTATGTGTAggtgattttcttttgttttgattttttaccgGACTGCTTAT
CTTATCAGTGTAAATTTTGTACTCATtctttagaaaattattttgaaatt
acatAAACATCGCTGGtgttattttattgttttcttttacATTATACATG
ACAAGTTTCCTTATGGGAAAATCCCTTAACTGTCAATCAACTTTGGGTTT
TTCTTGTAGTTCACATGGGGAAACCCCTAATTCAC
Run BLAST on NCBI

transcript from alignment at sc0000078:572895..581171+

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00007602 ID=TCONS_00007602|Name=TCONS_00007602|organism=Clytia hemisphaerica|type=transcript|length=8277bp|location=Sequence derived from alignment at sc0000078:572895..581171+ (Clytia hemisphaerica)
CAACAAAGCTAATTAAAACTTTTCAACTACGGTGGAGTGCTCTTTCCTCA
GTTGCGCTTCGTTACATCAGCTTTacgctaactttttttttgttgacaAA
ATAGCCTTCATAAATGGCGGACGTTTTGGCTCTCTtctgttgaaaatgtt
ttgaagaACGAAAAGAAAGATGAAACCTGGAGTTTTGATGATACGATAGA
AACTTTTTAATACTTCTAAAATATCCTATAATcttttggattttgaaaga
attattttgaatgaGACATGGTGATTTCATCGACAGAAGTTAGTGCTGTT
TCTCCAGCCATTCACTCACTTCCTCCTGAGGTTGGTTTTGCCTGTGATTT
TCTTTATCTTACATTTGCAGAGAATCTGTTTTACCAATTTTAGNattcta
taaaaagcgaccgcgcgggctgtctggggcgtccggggtagtctctcaaa
aacaaataatacggaccccgggcacgcatcaaaaaaaccccggaccgtcc
ggggcataggcagggtcgtatcCGGCTGGacttacaatttttttcaagtt
gaataGTGACCAAAGGGGGTTTCGAACCGGGAACTTATAGATTTCTAAAC
CAATGCCCTATCCACTAGACCAAGCCGGCTGCCGAAAAATCGTTATTTGG
GGTTACTTATACGAAGGTCTTAGTACTATATATGTATAAGTCTGACTGAC
GAGTTAGGCACCGCCGGGTTGATGCACCGCCGGCCGGGTGAGGGGTTAGG
GATGTGCACCAGGGTGGCTTCGCCTAACCCTATGCTACGCGCTTTGAGGG
GTATAGCATTAGCCGAATCTCATtgttgtttcgtcagccatctttactTT
TGTGATTGCTAGCACACTAGTTTATAGTacttaccgtgagatcgggtaac
ttgcatcagtggaggcaaacatgcatagccctcaaataaatgacctgtct
ggtcattaaaatacaaatttaaatcaaaacaaaaatggtagagtagagct
gcggtacagtagcctgggtatccagactcaaaattttagaaaaaaaaact
cttacctcaacatatcAATCAAATGAGGTGAAATCATATTTaaagagtgc
tcgataaaaCCAACCAGGAGTAGAGATTCTttaatcaaaagttttttatg
cAAAGGTCAATATAAAATACCCTGTTGCGAAGGGATCGTTTGATAATGTT
TGTCTATAACTCAAAAGAAGCATCTTATTTAtcagcacaaaaaaaaaaaa
ctttaaaagcttCAATGATTTCCTTCAAGTTTTTGTACTGTCATTTCTCT
ACTTTGGACctttcacatttttttctttacaaaattgGGTTTGAAAACTC
AATTCGAAATGAGTTTTTGCCACCGAATAACGGTGGTAAAAAAGAGCTTG
GAAATTACCCTGGCTATACTTAAGatcatttaattttttaccaAAATCCC
TAGGAAATTGAAACAAATTACATGAGTCGAAATTTTATCcccaaaaaaat
ctgaaatctaaAGCTAgctaaaattagcaaaaagcttttgatggaggaaa
aaagaattatcaaaaaactGACATTCCGAGGTGTTTACACTGGCTTTTCT
TGGATAACCAGCGgaagggttttttttttgaggtACAGAAAAATTTTGGA
GTTAGGAAAATAACTAACTTTCCAATGCTCATTCTTCAACTAGCCAGAGT
CCTTATCATTCTGCTTGCAAGTGGTAATAGAATCTTAGTCCTGAAAGGGA
AATCTTAACTTAAAGTGTGGTAATAAACAAACCTTtcaaaagtatgaaaa
aaagtttgttactGTAACATTTATATTTAACTTTACACTCCTTTACATAC
ATGTTCAATTTTTACATGCATTGTCAGTAATATGTTTCAAACTTTGCATT
GTGCAATGCAATGCCAGTGATCTCAGTCGGATGTTTGAAATGACaaattt
gctgtgtaaaattgATTTCCACACGAAATTAATTTTCtctaaacttgaaa
tttcagGTCGAAGAGGGAAACAGGGAGTACAAGGTAAGATATTTTAATAA
AGTTTAGATTAGTTAAAAATGATAAGTTTAAATCAGAATTGACTGTTTTT
GAAATTGatatttcaattcaaaaatttaaaatttttttttgattggaaTT
GTTCCCCTCTTGAATCAGTTCAGAAATGAAAATTGGCTTCTTTTATTTTC
AGCTGAAACTAGTCAATCCTACACCATCACGTGTTGAACACTTGATAACC
CAAATGAAATGGAGGCTAAAGGAGGGTGATGGAGAGGCTATTTACGCTAT
TGGAGTTGAAGACAACGGTGTCATAAGTGGTTTGCTTCGAGACGAGCTGG
ACTCGTCTCTTGAAACATTGAGTTCAATGGCAGACAGGTTATTCACGATT
TCCAATATCTAATGCTATATCCCCAAAGTTAAAAAAGCCACCAAATAGCG
TTATCGTAGTAGAATTCTAGAATTGAGGCCAAGGGGATTTTTCATGAACT
TGTTTTTGgaataaaaatcacaaatcgTATCAATCTCAAAAAgggattta
tttttatttacatttgCTTATTTTGTATTTGGATTTATTGTAATGTTTAC
TTTGTATACATACAATTGATTACTTAAAATTCTCAAATCCCTTCCAGGTC
ATATCTTAACTCTGTGTAAAAGCTGTGTAGGATGATCCTTTTATAATGCC
TTACTAATTTCCTCCAACTTAGATTTTAATAGTTGTGAAATATTGTCATT
TCCTCTTCCTTGATATAATGGGAATTGAAGCTTCCAAGAATCTAAAGTaa
gattttcatatttttagacTTGGCGCTGAGACACACATTATAAACGAACA
TACTATCCCCTACCCAAACAATATGACACGCCATGCAGCTGAAGTCATGG
TCAAGAAAATCCCTGATGAACAAGAGGTAAAAACTTGCCAATAGGATTGT
GTCAGGGGGTCAGAAAGCTGGACCTTGGTCTGGCCAGATCTCTCAAAGCA
AAAATAAGATTTACTAGCTAATCGAATTCTGTTTAATGGCTTTTCAGata
atttaaaaatgttttagataaaatatttaagatttgtTCTTTCGCGACTC
CCACGGTGAAGGCTCTTTAACTTAGTCATAACATCATGGATGGTCACTCT
CTCGATTTTTTGAAGTGGGTCTTATGGAGCCACTGGACTGTCCCCAAATA
AAAAGATACCAGCGTATTTGCAAAATTTGTGTAACTGTAActcttttaaa
ataattttcagtttATTGATATTCGTGTTGGGTGTATTGGTAACGTCGAC
GTGGGCAAAAGTACATTACTGGGTGTATTGAGTCACGGTGATCTGGACAA
TGGACGTGGTAAAGCTAGATTGAACATGTTCCGACATTTGCATGAGATAC
AAACTGGACGAACTTCGAGTATCAGTCATGAAATTCTTGGTTTTGATGCT
AACGGACATGTAAGTAGAGTGAAAGACTTTTTTAACAAATCATGTTTTAG
ATAaaggaaagtgaaattttcaatgtttatgATTTATTGCTTACAGTCTA
AAGCTGAATTGAATGGCTTTGTATGAAccttattttaaagtttttttagg
TCACAGGCACTATAGTGTTAATTTCATTGCAATTCGTACACTAGGCATTC
CTTTGATCTTGATCTTGATCTTGAAAGGACTTTTGTCGATGAAACTTAAT
CctattttgatatttgttttgttttcaggaGTTGAATTATAGCGGGTCGA
CAGTCGAGGAGATCTGTTCGTCTGCAAAGAAACTGATCACCTTTCTCGAC
TTGGCTGGACATCACAAATACATCAAAACAACAATACATGGGTTGACTGG
GTATTCCCCTGAGCTCGTTATGCTTCTTGTTGCAGCTAATAGAGGCTTAG
GTGAGGTGATGTTTTAGTTTCACACATACggctttttttaaatgtttctg
TAGGTTACATAACAGCGTTCACAGTGTGTTgtcactttgttttgaaaacg
aatTGATTTTTATCACTAGGCAAGCTCTTATGATAGGCTTAaacctttta
taagaacagaaatgatgtttattttttaatccAGGGGCTTAATAAAgcat
ttaaaaacactttttcgcGAACTATTTCTGGTGAGAATATTTTAACTGTT
GTTTTAcaacactttcaaaaaagaGGACCCTTTTTAAAAGCTATAAGCAG
GATCTTGTTTATCCTCTTAAAGTCTATAAATAAAATTTACGTTAATTCCT
ACATAACCTTTTTTTCTTATCTCAAAAGTTATCAACCCTTTATATTTCAA
CAAGCCGTTTTCCGTGAGAACTTAACTCAGCCTGTACTTTTCTCGGGAAG
CTCTCGACAACTTCAACAAGTTTTGTAAACAATTAATATTGATGTTTTTC
CCTGACGTAGTTACCTTTAAATTAACTATGATCATTCTTCATAttgtcaa
attatttcattgatggGAAATGTCCTCTATCtttttcaactttgttttta
acTAACttcataagaaaaaaaaacattagaccTAGAATAGTATTTCTCTG
ATTACACATTATTTTATAAGCAGCCGAGTTGGTAAGGGTCCACTGCTTAA
AATGGCCTAAAAGTTGAGCCTTGGCTTTAGCAACCAAGCCCTGAAACTGA
GCATGAACCGtgaaagcaacaaaaaaaaaaacaactaaaaaaagGTATTT
ATTTGGCATTAAAATGTGTATCGATGGTACTCAAAAACCTAATTTGAGGT
ATTTTTGAcataaaatgagataaaaaacCATTATTTTTGCTAGGCATTTT
TGGCTCCAAATCCATAAGCAATTTTTTTGGCTTATTCTGGAAAATCCTTA
GCAACTCCAGCCCTGAGCTGAAAATTTGGGTTGcttagtactagtaataa
catggtttagagggttattaatccaaaatcacccgagaataccatgttat
tccgcgttaattatatggtcaaaaaaagaattgaagaacactcgatcgct
attcttttcgaaacttataaaaacattcgaaactatgaAAAAACATTCGg
ctgacactcttattttgattggcttaaaaatttcgtaattaattaattaa
tttttgtttacatcagggcgattacaaaaaagcggggctattacggattt
atcgccccgctcgtcctttacaaatctaagctaaatgtaatcaaccatac
aattataaaaaaaaatgtgtacagtAATAGATTGAACTAATTTCTGCTTC
TCTCATTTACTTAAGCAGTCACTTTTACTTTCGAAAGGTTTTTGAAACTC
AAGAAATTATCCTTTCTTCACTTTCTCTTCCAAAACGCCGACTCCCTATT
ACCCTCGTGCAAGTTTTTGCTTCGGCCTCAAACCTTATTAGGCAAAGTCC
AATCGCTTTATTTgaagttttgaataaaaaattgataACGTCCATTCCTT
TTATCTTTGAACACGTCTTTAAACCCACCAAAAGCTCAAAAGTTGGGTCA
ATAAAGTCCGGGTTAAACAGTGCCGATAATGTATTTAAAATTGCAGTCTT
GTACTCTTTTTTTAGCGGGGACAACGAAGGAACATTTAGGACTTGCGATC
GCTTTGAAGATTCCCTTCTTGATCGTCATCACAAAAACAGATTTGTGTTC
GAAAGACATGATTGACCGTACTGTTCAGCAATTAGAGAAGATTTTGAAAT
CACCGGGCTGTAAGAAAGTTCCAATACGTGTGGAAGATGAAAACGATGCG
GAAACGGCCGCTGAAAGCTTCTCTAAACAGTATGTTGATATTTTATTAAG
CCCTGTTTGAACCTTTATTACTAATTTCTAGATATTTACCGTCTAGAATC
GTCCTGAACATCGAGCTCACAAGgtctaactttttttgattcACTTTATT
TTTCTCCTTGATTAACCGTATATTGCTTAAGATGAGATCTACATTTGTTA
TAATTAAAGGTAGCTGTGTTATTTATGAATTTGCTTTGTcaaatttcttc
aacttttttttcttttttcccacATAGGGTGACACCAATCTTCAAAGTTT
CAAGTGTTTCTGGTGAAAACTTGAACTTGCTTCGTAAATTTTATTTCCAT
CTTCCATCGTTGAGAAGTAAAATTGAACAAGATGAACTATTACAGTGTGC
TGCTGAGTTTCAGGTAtgaaaatttctcttttttatcatCTTTCGCAACT
TTTTTAGGCATCGAGCAACTGTCTTACGTCTAAACGAAAGAACTTCCTAA
AATCGTTTGATGTCCTACATATTATTTTCAGACATCGTAAGAAAACgcat
tttctatttcttttgtttagatTGATGAAATCTTTTCGGTGCGTGAAGTT
GGACCTGTATTGGCGGGCACCCTCAAATCAGGCGTTGTGAAAGTCGGCGA
CGCCCTTCTTTTGGGGCCGATGTCGAACGGTATGTTCGAGAAAGTAGTGG
TTGCTTCCATACATCGAAACCGGACACCATGTCGTGTCATCCAGGCAGGA
CAGACTGCTTGTATCGCTCTTAGAGATAACTCACAAATCATTCCACGGAG
GGTAAGAACTTTTGATTAATACCTGCACCAAATAGTCAAATGACAAACAG
TTTTCATTGTAAGCCGTCATTAAATAATCTTAAAAGCCACCAAACTGAca
ctttttctttcaaacaCCAAAATAACGCCACCTAAACCAGGCATAACTCA
AGAGCTATTAGCAGTCAAAACAGTCCTggaattcttttctttttgttaat
tgatatgattttgttttcaataaacAGGGACAGGTTTTGTTGGAAGACAA
ATTATCAGAGGATCCACCAAAGACTTGTAAAACGTTCGAAGCCGATCTTT
TCTTACTGTTCCATACAACgaaaattgcaccaaaatttcaagccacAGTA
CACATCGGAAACATCGTACAAACTGTCGTCATCAAATCCATGGATCGGGT
ACGTTATTCTGCTCCCTATGTTTGTTCTCAAGATTTTCTGAAAATACGGC
TTATGTGCATAGATTACTTAAAAAATATTACGAGATGAGATTTACCGTTT
AGGGTCTCtttgatttttaattgaaataattttaacCCTATTGAACTCAT
TGTTTCTTTCCTTAGGCTGACTTGCGTACCGGACAGAAAGCACGGGTAAA
GTTTGAGTTTATCGGACACCCACAATACCTTCGAAACGGTGATCGGATGT
TCTTCAGAGAAGGGCGGTGCAAGGGCGTTGGCGAAGTTACCCAATTCTTC
GAGTACAAACATGATGATCAGACTGAATTGGCGATGCACTCTTAACACAC
GCCCATATAATGATGTCATTGTCACGTGCAAAAACGAATGACTTTTACCG
GTCACGGAAAGGTGCatggattttatttttgttgatattttttgtttctt
tgcttttttcatATCATTTTAGCGACAGAAAACCAAATTTCtattaaagt
tttattttaatagTGCATATTTATAATCTTTTACTTTGCAACCCCACTAC
TTAATTATGTTTAATATTATTAGAGTATGAAAAATAgtatttcgaaaatt
ttactataaaaagtgaaaaaatcctAACTGCACCTTTGTAAAAATTAGTA
TCTGCTTTTAGGTATTTTCATAGATACTTTACAATTTAGGTACTTTATTA
TCACCATACATCACCATATTTTAAACGACTTGTTATCAAGTCagattttg
atgtatttttggagtcattcttttgaattctttttttgtCCAATGCTGGT
TCTTGGAAGTCAaatcttttttactttaaaatttttgctacccaaaataa
aaacaagagtCGTAATTTTGGTTAATGTAATGTTCTTTGAATCCTTtgtg
aatttcttttttgaaaaagttaaaaaatttcttattgAGAGATGCATATA
GTGAGAAAATTAAGcatgaaaaaaaacacagaaattTTGAACTTATGGTA
TGTGTGCTTGTAAATACGTGTTCATAGTAGGGAAAACGACTTGTAGTAAT
GTGTACATAGTATATCACCATGATCAAAAAGTAGCAGTCCGGTTATGTGT
AggtgattttcttttgttttgattttttaccgGACTGCTTATCTTATCAG
TGTAAATTTTGTACTCATtctttagaaaattattttgaaattacatAAAC
ATCGCTGGtgttattttattgttttcttttacATTATACATGACAAGTTT
CCTTATGGGAAAATCCCTTAACTGTCAATCAACTTTGGGTTTTTCTTGTA
GTTCACATGGGGAAACCCCTAATTCAC
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_004289XLOC_004289Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00007602-exon-sc0000078-1491911889:572895..573224TCONS_00007602-exon-sc0000078-1491911889:572895..573224Clytia hemisphaericaexon
TCONS_00007602-exon-sc0000078-1510915933:572895..573224TCONS_00007602-exon-sc0000078-1510915933:572895..573224Clytia hemisphaericaexon
TCONS_00007602-exon-sc0000078-1575043694:572895..573224TCONS_00007602-exon-sc0000078-1575043694:572895..573224Clytia hemisphaericaexon
TCONS_00007602-exon-sc0000078-1491911889:574901..574927TCONS_00007602-exon-sc0000078-1491911889:574901..574927Clytia hemisphaericaexon
TCONS_00007602-exon-sc0000078-1510915933:574901..574927TCONS_00007602-exon-sc0000078-1510915933:574901..574927Clytia hemisphaericaexon
TCONS_00007602-exon-sc0000078-1575043694:574901..574927TCONS_00007602-exon-sc0000078-1575043694:574901..574927Clytia hemisphaericaexon
TCONS_00007602-exon-sc0000078-1491911889:575097..575281TCONS_00007602-exon-sc0000078-1491911889:575097..575281Clytia hemisphaericaexon
TCONS_00007602-exon-sc0000078-1510915933:575097..575281TCONS_00007602-exon-sc0000078-1510915933:575097..575281Clytia hemisphaericaexon
TCONS_00007602-exon-sc0000078-1575043694:575097..575281TCONS_00007602-exon-sc0000078-1575043694:575097..575281Clytia hemisphaericaexon
TCONS_00007602-exon-sc0000078-1491911889:575712..575820TCONS_00007602-exon-sc0000078-1491911889:575712..575820Clytia hemisphaericaexon
TCONS_00007602-exon-sc0000078-1510915933:575712..575820TCONS_00007602-exon-sc0000078-1510915933:575712..575820Clytia hemisphaericaexon
TCONS_00007602-exon-sc0000078-1575043694:575712..575820TCONS_00007602-exon-sc0000078-1575043694:575712..575820Clytia hemisphaericaexon
TCONS_00007602-exon-sc0000078-1491911889:576156..576353TCONS_00007602-exon-sc0000078-1491911889:576156..576353Clytia hemisphaericaexon
TCONS_00007602-exon-sc0000078-1510915933:576156..576353TCONS_00007602-exon-sc0000078-1510915933:576156..576353Clytia hemisphaericaexon
TCONS_00007602-exon-sc0000078-1575043694:576156..576353TCONS_00007602-exon-sc0000078-1575043694:576156..576353Clytia hemisphaericaexon
TCONS_00007602-exon-sc0000078-1491911889:576623..576794TCONS_00007602-exon-sc0000078-1491911889:576623..576794Clytia hemisphaericaexon
TCONS_00007602-exon-sc0000078-1510915933:576623..576794TCONS_00007602-exon-sc0000078-1510915933:576623..576794Clytia hemisphaericaexon
TCONS_00007602-exon-sc0000078-1575043694:576623..576794TCONS_00007602-exon-sc0000078-1575043694:576623..576794Clytia hemisphaericaexon
TCONS_00007602-exon-sc0000078-1491911889:578460..578673TCONS_00007602-exon-sc0000078-1491911889:578460..578673Clytia hemisphaericaexon
TCONS_00007602-exon-sc0000078-1510915933:578460..578673TCONS_00007602-exon-sc0000078-1510915933:578460..578673Clytia hemisphaericaexon
TCONS_00007602-exon-sc0000078-1575043694:578460..578673TCONS_00007602-exon-sc0000078-1575043694:578460..578673Clytia hemisphaericaexon
TCONS_00007602-exon-sc0000078-1491911889:578922..579057TCONS_00007602-exon-sc0000078-1491911889:578922..579057Clytia hemisphaericaexon
TCONS_00007602-exon-sc0000078-1510915933:578922..579057TCONS_00007602-exon-sc0000078-1510915933:578922..579057Clytia hemisphaericaexon
TCONS_00007602-exon-sc0000078-1575043694:578922..579057TCONS_00007602-exon-sc0000078-1575043694:578922..579057Clytia hemisphaericaexon
TCONS_00007602-exon-sc0000078-1491911889:579215..579445TCONS_00007602-exon-sc0000078-1491911889:579215..579445Clytia hemisphaericaexon
TCONS_00007602-exon-sc0000078-1510915933:579215..579445TCONS_00007602-exon-sc0000078-1510915933:579215..579445Clytia hemisphaericaexon
TCONS_00007602-exon-sc0000078-1575043694:579215..579445TCONS_00007602-exon-sc0000078-1575043694:579215..579445Clytia hemisphaericaexon
TCONS_00007602-exon-sc0000078-1491911889:579672..579842TCONS_00007602-exon-sc0000078-1491911889:579672..579842Clytia hemisphaericaexon
TCONS_00007602-exon-sc0000078-1510915933:579672..579842TCONS_00007602-exon-sc0000078-1510915933:579672..579842Clytia hemisphaericaexon
TCONS_00007602-exon-sc0000078-1575043694:579672..579842TCONS_00007602-exon-sc0000078-1575043694:579672..579842Clytia hemisphaericaexon
TCONS_00007602-exon-sc0000078-1491911889:580010..581171TCONS_00007602-exon-sc0000078-1491911889:580010..581171Clytia hemisphaericaexon
TCONS_00007602-exon-sc0000078-1510915933:580010..581171TCONS_00007602-exon-sc0000078-1510915933:580010..581171Clytia hemisphaericaexon
TCONS_00007602-exon-sc0000078-1575043694:580010..581171TCONS_00007602-exon-sc0000078-1575043694:580010..581171Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000078supercontigsc0000078:572895..581171 +
Expression

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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
1.88241	2.0816	0.61482	0.387132	84.3921	58.5623	39.2411	42.7468	44.5071	44.7539	32.9556	40.0865	32.5509	26.9338	13.0964	16.8742	22.8808	22.7629	44.9748	49.4759	48.5374	47.6621	20.3357	22.2186	31.2582	28.516	26.667	22.9838	8.21786	6.32606
Blast
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BLAST of TCONS_00007602 vs. Swiss-Prot (Human)
Match: GTPB2 (GTP-binding protein 2 OS=Homo sapiens GN=GTPBP2 PE=1 SV=1)

HSP 1 Score: 611.298 bits (1575), Expect = 0.000e+0
Identity = 301/531 (56.69%), Postives = 403/531 (75.89%), Query Frame = 1 
Query:  319 LPPEVEEGNREYKLKLVNPTPSRVEHLITQMKWRLKEGDGEAIYAIGVEDNGVIXXXXXXXXXXXXXXXXXMADRLGAETHIINEHTIPYPNNMTRHAAEVMVKKIPDEQEFIDIRVGCIGNVDVGKSTLLGVLSHGDLDNGRGKARLNMFRHLHEIQTGRTSSISHEILGFDANGHELNYSGS-TVEEICSSAKKLITFLDLAGHHKYIKTTIHGLTGYSPELVMLLVAANRGLAGTTKEHLGLAIALKIPFLIVITKTDLCSKDMIDRTVQQLEKILKSPGCKKVPIRVEDENDAETAAESF--SKQVTPIFKVSSVSGENLNLLRKFYFHLPSLRSKIEQDELLQCAAEFQIDEIFSVREVGPVLAGTLKSGVVKVGDALLLGPMSNGMFEKVVVASIHRNRTPCRVIQAGQTACIALRDNSQIIPRRGQVLLEDKLSEDPPKTCKTFEADLFLLFHTTKIAPKFQATVHIGNIVQTVVIKSMDRAD-LRTGQKARVKFEFIGHPQYLRNGDRMFFREGRCKGVGEVT 1899
            LPPE E+GN EYKLKLVNP+  R EHL+TQMKWRL+EG GEA+Y IGVEDNG++ GL  +E+ +SL+TL  MA+++GA+  ++ E  + Y ++M R   EV+V+K+PD Q+F+D+RV  +GNVD GKSTLLGVL+ G+LDNGRG+ARLN+FRHLHEIQ+GRTSSIS EILGF++ G  +NYS S T EEIC S+ K+ITF+DLAGHHKY+ TTI GLT Y P+  +LLV+AN G+AGTT+EHLGLA+ALK+PF IV++K DLC+K  ++RTV+QLE++LK PGC KVP+ V  E+DA TAA+ F  S  VTPIF +SSVSGE+L+LL+ F   LP L +  EQ+EL+Q   EFQ+DEI++V EVG V+ GTL SG+ + GD L++GP  +G F ++ V SI RNR+ CRV++AGQ A +AL D  + + R+G V++  +++   P  C  FEA++ LLFH T     FQ TVH+GN+ QT V++ +   D LRTG+KA V+F F+ HP+YL+ G ++ FREG  KG+G VT
Sbjct:   59 LPPEAEDGNIEYKLKLVNPSQYRFEHLVTQMKWRLQEGRGEAVYQIGVEDNGLLVGLAEEEMRASLKTLHRMAEKVGADITVLREREVDYDSDMPRKITEVLVRKVPDNQQFLDLRVAVLGNVDSGKSTLLGVLTQGELDNGRGRARLNLFRHLHEIQSGRTSSISFEILGFNSKGEVVNYSDSRTAEEICESSSKMITFIDLAGHHKYLHTTIFGLTSYCPDCALLLVSANTGIAGTTREHLGLALALKVPFFIVVSKIDLCAKTTVERTVRQLERVLKQPGCHKVPMLVTSEDDAVTAAQQFAQSPNVTPIFTLSSVSGESLDLLKVFLNILPPLTNSKEQEELMQQLTEFQVDEIYTVPEVGTVVGGTLSSGICREGDQLVVGPTDDGCFLELRVCSIQRNRSACRVLRAGQAATLALGDFDRALLRKGMVMVSPEMN---PTICSVFEAEIVLLFHATTFRRGFQVTVHVGNVRQTAVVEKIHAKDKLRTGEKAVVRFRFLKHPEYLKVGAKLLFREGVTKGIGHVT 586
The following BLAST results are available for this feature:
BLAST of TCONS_00007602 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
GTPB20.000e+056.69GTP-binding protein 2 OS=Homo sapiens GN=GTPBP2 PE... [more]
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