TCONS_00007592 (transcript) - C. hemisphaerica

Overview
NameTCONS_00007592
Unique NameTCONS_00007592
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length1583

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00007592 ID=TCONS_00007592|Name=TCONS_00007592|organism=Clytia hemisphaerica|type=transcript|length=1583bp
ctgcaaatctgagcctttatatatgcttataaacgttatgcttgtTTATC
TTTCAgacaacaaaaaataaataaaatgaggGAGTTAGAATGTGAACTTG
CATTTCTTAGTAAATGTGATGGTTCAGCAGCATTCCAACATGgtACAACC
AAAACACTATGTGCTGTTTACGGACCAGTGGAGGTCAAATTAAACCAGGA
GAAAGTTGATCGAGCAACACTGGACTGTATTATTAAACCAAAAGTTGGTC
TAGGCAGTGTGAAGGAGAAGTCATTAGAAGCCATAGTCTCGAAAACATGT
GAAGAAGTTGCATTAACCACGCTCCACCCTCGATCTGCCATGCAAATTGT
TGTACAAACATTACAAGACTCTGGATCGttGCTGGCATGTATGTTGAATG
CAAGTTGTATGGCTATGGTGCATGCTGGTTTGCCCATGAAAAGTCTGATG
GTTGCAGTAGCTTGTTGTGTTTGCAATGATCAGATCATCATTGATCCTAC
CTTGGAAGAGGAAGAGAACAGTGTATGTGGGATGACGTTTGCTTTTGGaa
caaagaattttgaaatgatTGCTTCACATACGTACGGCTCTTTCACTGTG
GATCAGtaCATGACATGCTTGGAAAATTGTCGACGTGTTGGTAAACAAAT
AGCTTCGTTTCAGAGAGATTCGATAACCCGTTTCCTTAGCAAGGAAACAA
ACGAGGAAGAGACGGAGACCGAGGAAGAATGAATGAAAGGGATGAAAGAT
TCAAATCATGGGCGAATGAATTTTTGAAGGACGGAGAAAATCTATGAATA
ACAAGAGAACTACTAGAGTACGCTGATGAGTAAATGCTAAAGTGGAAATA
TAATCGAAAAATGGAATGGAATGGAAGTTAGACAAAATTTGAATACTGAA
TACCAATATCATACCTAATGATAATCGAGCTAATGCGAATCATCGAATGA
AAATCGGGAGTAAATGGGACAACCTTGATAATCTAAAACCGTCAAAAAAA
AAAGGACTGAACGAGCTTTTAGATGTCTATTTTGGGATGAATACTCTATT
TCGATTAATTATTATCGAAAGCAAAATTTGTTCATGAAGTATTCCCCAAA
AGATAATTATAGATATTTTAACTATATCAGGTAATGGTGGCTCAAAATAa
cacattgggctcttccagaaaaagttCGTTCccggggggtggaggatata
tgaatttttcaatgatctaccccttaacattttgacttttcaccccctgg
acaagcgttttacccctggacatggcaaattcaccccatggacatggtag
tttttcaggatttttcgatacccctggacaatatatcttccaccccctat
taagggtttttttctggaagagcccatttatAGGGATGATCGACACAAAA
ACCCTCACATTCTTtccatttttgtttgatttgtcaGAATCATAATAAAT
ACATCAAACCacttatttttccaaaattcttcCTGAAAAGGTTTCCCCAT
TTTCCCGAGATTTTTTGGAATGAATTTGGAAAGTTTCAAACATACATTTT
AACAAAcattcattttaattttactgTACTGAG
Run BLAST on NCBI

transcript from alignment at sc0000078:484369..494714+

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00007592 ID=TCONS_00007592|Name=TCONS_00007592|organism=Clytia hemisphaerica|type=transcript|length=10346bp|location=Sequence derived from alignment at sc0000078:484369..494714+ (Clytia hemisphaerica)
ctgcaaatctgagcctttatatatgcttataaacgttatgcttgtTTATC
TTTCAgacaacaaaaaataaataaaatgaggGAGTTAGAATGTGAACTTG
CATTTCTTAGTAAATGTGATGGTTCAGCAGCATTCCAACATGGTAAGACT
ACATTTTATCTGTGGTTAGCTAGTAAAAATGgtgttcaaaaaaaaaaaat
ctatttatgTTAGGGGGTCAATTTCAAAGGAATAATTGAATCTATtagaa
tttttaatttaaaataaattcagaGAGAAGTGAGTTGTCAACATGACATT
AGaccaaataataaaataatagtATGAATTACTAAATAAGTAAGATGACA
GTGTTATAAAAGGCAATAGTAGTCAAAAGGATTACAACGCCCCTACAAAC
AACTTTACACCTACTACTAGTATTACGAAACTTTTATCTTAATTATCTTA
AGCTCAAAGAGCTAGCAAGACAAAATAACAAGCTGTCACTAATTATATTT
GATAATTTGCAGGAACCTTTGCAAAGTTGTCTTTCACAAATGTtataatg
attgaaaattattttcaaaggtACAACCAAAACACTATGTGCTGTTTACG
GACCAGTGGAGGTCAAATTAAACCAGGAGAAAGTTGATCGAGCAACACTG
GACTGTATTATTAAACCAAAAGTTGGTCTAGGCAGtaattatatcatttt
ttacaatttctttatgTTTCAAATCATATGCGTTGTCTTATTTGAAATAT
CTAGACATTCAATTAAAAAGATTATCATCTCTTCAATCTCTTTACCTAAA
AATGCTTGTGAATTTAGACATTTTTCATGTCTGGTTATCAGCCAAACACC
AGATTTCAAGAATTAtctgatataacatagtttccTTCCCTCTTTCTGCT
AGGGGAGGggttcaaaaaaaattccagaaaggggggggggcaaaaggAAA
AATGGAAATCCAGGGGGATTTCAAAAAGGttcaacaaattttttctgggg
caagaacttttcaactttttaacagAAAGTCTTCTGTCACCTTTTTAGTT
CTTTTACATATGCATGTTTTTCTTCCTCAAATCACATGGTAGATGCTCTC
TTTCTTGGATAGTTAGCAATTTATTTGTTTCTCTTGTGGTGACATTTTAA
AAAGAACTACATTTTGTGTGCAATGCAAATGTCAGGTGCATTGATTGTCT
GGATCCAGGTCCGCAGGGTGGTGAAAAAAAGGCATGCAGGCGGccaggaa
aaagttttttctgctcCTTTTCATGAAAGTAAATTTAAACACAAANTTAT
GTTAGGGGGAATTTCAAAGGAATAAATGAATCTATTAGAATTTTTATTTA
GAATAAATTCAGAGAGAAGTGAGTTGTCAACATGACATTAGaccaaataa
taaaataatagtATGAATTACTAAATAAGTAAGATGACAGTGTTATGAAA
GGCAATAGTAGTCAAAAGGGTTACAACGCCCCTACAAACAACTTTACACC
TACTACTAGTGTTACGACACTTTTATCTTAATTATCTTAAGCTCAAAGAG
CTAGCAAGCTGTCACTAATTATATTTGATAATTTGCAGGAACCTTTGCAA
AGTTGTCTTTCACAAATGTtataatgattgaaaattattttcaaaggtAC
AACCAAAACACTATGTGCTGTTTACGGACCAGTGGAGGTCAAATTAAACC
AGGAGAAAGTTGATCGAGCAACACTGGACTGTATTATTAAACCAAAAGTT
GGTCTAGGCAGtaattatatcattttttacaatttctttatgTTTCAAAT
CATATGCGTTGTCTTATTTGAAATATCTAGACATTCAATTAAAAAGATTA
TCATCTCTTCAATCTCTTTACCTAAAAATGCTTGTGAATTTAGACATTTT
TCATGTCTGGTTATCAGCCAAACACCAGATTTCAAGAATTATCTGATACA
ACATAGTTTCCTTCCCTCTTTCTGCTAGGGGAGgggttcaaaaaaaaatt
ccagaaagggggggggggcaaaatgaaaaatggaaatcCAGGGGGATTTC
AAAAAGGttcaacaaattttttctggggcaagaacttttcaactttttaa
cagAAAGTCTTCTGTCACCTTTTTAGTTCTTTTACATATATGCATGTTTT
TCTTCCTCAAATCACATGGTAGATGCTCTCTTTCTTGGATAGTTAGCAAT
TTATTTGTTTCTCTTGTGGTGACATTTTAAAAAGAACTACATTTTGTGTG
CAATGCAAATGTCAGGTGCATTGATTGTCTGGATCCAGGTCCGCAGGGTG
GTGAAAAAAAGGCATGCAGGCGGccaggaaaaagttttttctgctcCTTT
TCATGAAAGTAAATTTAAAcacaaattaaaataaaaagttttgagaaatC
TTCCGATCATCATATTGTAAACGCATAAagtcattttgcaaaaaacgtgt
aataggAAACTAAGCAAAAAAGAAATGAACAAATTGATAAAACTGCCGCT
GGGTGacaacaaaaaagattttcaccGGGCAGGAAAGATTCAAAACTGGC
CATATAACGTCCACAGAAAAACgcttggaattttcactgaaCTGTCCTTC
TATCTAGAAACTAGCTTAGAATAGTTGTGCATCATTTCTAGGaaagaata
aaatctaataaacAATCAAATTAATTTATGATTCAAGGTGTGAAGGAGAA
GTCATTAGAAGCCATAGTCTCGAAAACATGTGAAGAAGTTGCATTAACCA
CGCTCCACCCTCGATCTGCCATGCAAATTGTTGTACAAACATTACAAGAC
TCTGGATCGGTAACTATGTTTCCaagtttattttgtttattttattttaa
tcacTATTTACATTATTTTTCACTATTCCAGAAGTACCCTGGTACCCCCT
GTAGTTAGGACTCCTGCTTTATTTATCGAGCTTTGGAAAATACCACCCCC
TCAGTTTGATAGTTCCTAGCCCCTCTTCATTTAGTGGGTCTTGAAACTCT
TTATTTCTTAGctttcttattttcatattgAAAATGCCTCAATGTGTTAT
CCCTTGATTAcctttttgtaatattttttgattagaagtaacatttttaa
atttgaaattcgaTACGTTTACAGAACAACTTTTGtttagaatttttaga
tttaacctgtgattttttaaatttattcaaGAGTAAGATGGTATAAAAAT
CTATCAAATCTATTTCTTAGCAACATCATaatgttcttctttttcagttG
CTGGCATGTATGTTGAATGCAAGTTGTATGGCTATGGTGCATGCTGGTTT
GCCCATGAAAAGTCTGATGGTTGCAGTAGCTTGTTGTGTTTGCAATGATC
AGATCATCATTGATCCTACCTTGGAAGAGGAAGAGgtgaaaattttatgt
tttttcgtATTTGAATTTGCAAAAAGGAAAATGATTGATTTCTGAGAACT
TCTTGAACCTAAGCTCCTCAAATTGACTTCTTCTTTGAAAGAACATTGTa
gcttgtttttaagatttcaaTTTCTTCAACTCCCTCCTGCATATGAGGTT
AAATGGCTCCTTGTGATTCATTTCAGAAAAATTCTCTGCTTTAGTCTTAC
TCCGTTTTACAGAAGTATCACCCAATTTTGATACCTGTTCATGGTGAATA
ATGACATACATACTTCTATTTCCAGAACAGTGTATGTGGGATGACGTTTG
CTTTTGGaacaaagaattttgaaatgatTGCTTCACATACGTACGGCTCT
TTCACTGTGGATCAGGTAAATTAGGTTTCTCTTTATTAATTCTtcctaaa
tctaaaataaagaTACAGCCAGCTttttctctctaattcaatGTTCTATT
ATTAGATACGATccattatttgataatattgaaagctaCGGTCAACAAGA
AATTAATGAAGGACGTTCTACTATTGGGAAAAGTTGAGGAGCTGAACGGG
TTAAGGATTCATTTTTGTGCGAGAATGGGCATGGCCGGCGTGACAATTTT
TGCAGTTTTCTCTTAACTAAAGAGTGTAAAAAGATGATATAGAGCGATAC
TAGTATGAAAAGTTTTTATTGGATAGCGAAAGGGTAACACTATAAAAGAT
ACCCCGATTATTTTAATTTGATACAGTTCAATGGAAAAGACTGATAAAAG
GTTATGCACGGACAGACGTTATATACCGCAGTTTTgcataaaataaaaat
ctacaGTCTTTTGTAATGTGACGTAGATTTATCactgaaatatttgacgt
caaataaaaaatcacccATATGAAAgtttctgcaaaattttaaaaacttc
aattGAGAGAAATCATTTCAGCGTAATGCCGAGTTGACTCTGATCCTGAT
TATTATCGTGAAAATTTTATATTGTATTTACAAAGTTAATTAGTGTAAAA
ATGCTGTCAACATTGAAAGCAAACCGATGTGGCAGACATGAGGAGAAGTG
GCTTAAAACAGTTGTGGTTTACGAAGCTGATCTGGAACGAacaagcaaaa
tttcaaaatcacgcAAGAAGCAAAAATACACTTCCTCCAAAAAAGACTCA
CGCAAAGAAATTGTGAGccgaaatcaaaatgaaaatagcaAGGGGAGAAT
AATTCAACTTCTTAACACGAAAGCAAGCTGTGGACAACCAACTTCATTGA
TCACCTTCACGGACAAGAATGGCGTGGAATTAACCGTTACTGCCCAGAAG
TTTAATCAGCTGAAAGAATGCGGTTTACTACCAGCGAACGCTGTTCCAAC
CTTGCAAGATCCACCTACAAAAGCAACTTCACCTTTGAAAAGTCAAGCTA
CAATCCAACAGTTGATCACCTTCACGGATAAGAATGGCGTGGAATTAACC
GTCACTTCAAAGAAGTTCAATCAGCTGAAAGAGTGCGGTTTACTTCCACC
AAACGCCATTCCACCCACGCAAGATCGGCCTAACAAAGTGACTACTCCTT
CGAAAAGTCAAGCTACAAGCCAACAGTTAATCACCTTCACGGACAAGAAT
GGCGTGGAATTAACCGTCACTCCAAAGAAGTTCAATCAGCTGAAGGAGTG
CGGTTTACTTCCATCCAACGCCATTCCACCATTGCAAGAACCGCCTACTA
AAGCGACTACACCTTCGAAAAGTCAAGCTACAAGCCAACAGTTAATCACC
TTCACGGACAAGAATGGCGTGGAATTAACCGTCACTTCAAAGAAGTTCAA
CCAGCTGAAAGAATGCGGTTTACTTCCACCAAACGCCATTCCACCCTCGC
AAGATCGGCCTAACAAAGTGACTACACCTTCGAAAAGTCAAGCTACAAGC
CAACAGTTGATCACCTTCACGGACAAGAATGGCGTGGAATTAACCGTCAC
TTCAAAGAAGTTCAATCAGCTGAAGGAGTGCGGTTTACTTCCACCCAAGG
CCATTCCACCCTTGCAAGAACCGCCTACTAAAGCGACTACACCTTCGAAA
AGTCAAGCTACAAGCCAACAGTTAATCACCTTCACGGACAAGAATGGCGT
GGAATTAACCGTCACTTCAAAGAAGTTCAACCAGCTTAAAGAATGCGGTT
TACTTCCACCAAACGCCATTCCACCCTTGCAAGATCAACCTAACAAAGTG
ACTACACCTTCGAAAAGTCAAGCTACAACCCAACAGTTGATCACCTTCAC
GGATAAGAATGGCGTGGAATTAACCGTCACTTCAAAGAAGTTTTATCAAT
TGAAAGCCAGCGGTTTGATTCCATCAAACGCCATTCCACCCTTGCGAGAT
CTGTCAACCAGGGCCGCTCCACCTTCACAAAACGTGTCGAGCTCAGTCAC
CGAAGAATACTTCGAGCTGAAGCAACACGAACAAAACAAAAGTGAAGACG
CAAAATCACTTCAAGCCCTCCTCGAACTAGCAAAAGGTGACATTTCAAAA
GAGCGTATCAACTTCTACAAAGAACTAATAAAGGAAGCTCAAGAAGCTCC
TTTACCAGATGACGATGGTCAATGGTAAAAGTTGACACgaacgaaaaata
aacaaaaaacatttaataaaaaccaaaaatctttaaaaatcctGTATTGT
TTTTACATAATGTAAATATAACTCCGTATATATAATCACGTTGTCAATCA
TCTTAATTTTCAAATCCTAAAAGTATTAATGTTTATTTATGGCATGCTAT
ACAAAATTGATGCCAAAATGAGGTCTTTAGCACAAAAATcaataatatca
ttatggaAAATCTTGTATCTAACTCTGACATCTCAAAGTCTGTTAAACTA
TTGTTTTAactgaaatcatgaaattgacgCAAAGCAGATATCTTTTCCCG
GATATTTCACGATTTGCAACCCACATCTTTACAGATTCTAGCCGACTTTA
TTAGTAGTTGTTGTCCAGGGAAGAGAAAATTATATACAATACAATCTGAA
ACCCAAAACTCGTATCGAgtattttcataacttatttgaAGTATCGGcgt
aaaaatatttaataaaccTTTTTGTATCCTGTACTAtaaactttcaactt
tcaatcCTTTCAACTTGTACATTTGAATTTCTGAATTAACGAAAGTAGCT
CCCTCGTCAaggaaagggggggggggtctatTAGAAAATAACCcaagaat
ttgaaaattgaatcttCGAATAGCCTTTTACTACAACATTATTGAATGTG
CTTATTTATTGTGTATTTACTATGTATAAGAATTAAAACTctttaataaa
aattataaactGAAGTTAAAGCTAGTGCAATATCTCAAGTCAAAGATTAT
TCTTAATCACCACATCTTAGATGGGAGCATATTGTTCGAatggacttttt
caaaacatccaAAATCAACTGATTCCTTATTGCTATGGAAACAGGTACCA
GAGTGAAATTGAGGTTCATGAATAAATCTGCTACCATGACAACTGTCCTG
TTAGGTTCTTCCGGTGAGCCTCGTTTTAATGCCCGCACTAACCGAAATAT
TTCCGGTATACTGCACACGATATATGAGGTGGACAGTAACATGACTGTAT
TGATCATTGTTCGATTTGTTTTCCGATTCAAATGCCGAATCTTCTTGGAG
CTGATGGCTCTGGTGTTGTTGTTGATACTCAGATTGGGAACAGAATTCTC
CTCTATGGCTGATGGTATTTGAAAAGAGAAAGCTGTCCGTGAGTTGTAAT
AACCACCTGATATAGCGGTTGAAGATGTCGCCCCTGAGCCGGAGGTTGTA
TCTTTCGAAATGGCTGTTGCGGTTTTGCGTCGATGTCGAATGATGACTTT
GTAGATATAAACATTTGTTAAAAGGAGAGCGCTACTTGTTATTACCATGG
CAACAAAAGCTAAGGTACCAGTTACCAAGAAggcttctttgtttttattc
aatgtcATGATAAGTGCTATACAGAACGAGAAACAGGGGAAAGCGAAAAT
AGAAATCGAAATCCAGAACACTTTCCTATCCGTCAAAATGACAGTATAGC
GCAGAGGATGTCGTACGCTGACGTATCGGTCTAAATTGATCGCCGTGTAT
GAGAAATTGCAAGCGATTAAAAATGAATCGTAAACGGTGTACGTGTAAAT
TGAAATCTGATGTATGGATGCCGATTCAAGTAGATAGTCTATTTCGGTGA
TGAAACTGATCAGAGATATCAAGATTTGTGAGATGAACAAATTCTTCATT
AATACTATTGGGATACGAGTGGACAGCTCGTGGCGGTAGATATATAGCGT
GATTGCTAGGGCGCTGTTACATATGAAGGAGGTATGAATCAATACCAAAC
TAATTATCCCAATTACTGACATGACTATATCCTCGGTCGATTTCCAATTG
TTAACCATGAAGGGGTCGTCTCCTGTCGGTTGATGGAGATGATCTTTTTT
AAGACAAGCCTTGAATTTGGCTGCCCTCTTCTTCGCCGAATAAATATAAT
AATCGTGAAACTATTTGCACTATATTGGAATTGTAGAATTCAACAATCTT
GAAGCCTCTCTGCTCTCAAGATCTCAACCACAGCATTACACCCAATTATC
CAAACGCAAGTGTGATTTAtgaattttctaaatatttttctttgttacaT
TGTAACTTCTTCCTGACTTAATATCAACCGTCTTTTCAGAAAGAAATGTC
TTGGGGTATTCTGTCAGTATTTAGCCTCAGCCtctaaagtttttttattt
ctccTTTTGACCGATTTGAAATCTCTGCAACACAGGATAGGTCGATATTG
TATTGTTTACCTACACTTTGTGATGTTTTTGACACTTGCTCCTTTTCGAA
ATTCCTTTTGTTTTCCTTAAAATCCCCATCTTCCTTTCACACTCAAacat
tttaacaagtttttccttttttgacaGTTGTATATTTGATCATGTGTATT
TGTTCCTTGActtttacaaaaacttttccatgttcCTTCTTTCAGTATTA
AATATTTAGCTATGCAGTTTCTTTTTACTTCTCCTCTTTTGCTTAGACGA
GCCTTCTGCTATTCTCTTTTAAGTCAGCAAAAACCTCTTCTCGAGTTTTC
TCTCTTATTTCTTAGCGACACCATTCTGATTTTCAGACCTGAATTTTTAT
AAGATGGTGAATGCTACGGCCTGCTTACTTCCTTAGCACTTGATGTTACA
TACATACACCTGCCCCTTAGTTTACGTGATTaattaaaaaagtgaaacaa
aatgaatatatcaaattaataaatttcaattaaaatatcaatcaaatttA
TTAGATAGTTGTCCTAAATATTTTCttaatcaattttcatattttttctt
ttagtaCATGACATGCTTGGAAAATTGTCGACGTGTTGGTAAACAAATAG
CTTCGTTTCAGAGAGATTCGATAACCCGTTTCCTTAGCAAGGTAACATAC
ATAACAATTACAacaaaccagctgcgctggaaggtcagcccaattACAAC
AACAGTCACGATATACATCTCAAATGACCACACCCAAACCTAAATTTGAA
CTAAATTTTGATCCCTAAACACTTATTTAGtgataaacaaaatgaaaata
actttcaatCCTATTACTACCAAGCTTTTTGGTCAGGTCAGGTTATGAcg
ttatcattttttttaattattgttTCCGCTGAGATATCTAGTGAATatct
aaaacctgtcaaaatgtGAGGTTAAATGGATAATTACAATATGTATATCC
AAAGTCATGCTAAATTTTAAGATTCTATAATTCTCAGATTCTATAATTCT
cagattttacagggttttagctggattttaacATTCCTCAATAAAAAAAA
CGTCATAAAATCTGATCTAGCTGGtatatgattaaaaaatttggtATTAT
ATGTTGCCGAGAAGAATatattaaaagtaaaaaagttttcttttcactta
ctaGATATTAACGAATTAGATATTGAAGCGTCAGGGTGGCTGAAAACATA
CCCcttaataaaaataattaagtGGTTCTTTTATCAATTGTTTATTTCTT
CCCCAGGAAACAAACGAGGAAGAGACGGAGACCGAGGAAGAATGAATGAA
AGGGATGAAAGATTCAAATCATGGGCGAATGAATTTTTGAAGGACGGAGA
AAATCTATGAATAACAAGAGAACTACTAGAGTACGCTGATGAGTAAATGC
TAAAGTGGAAATATAATCGAAAAATGGAATGGAATGGAAGTTAGACAAAA
TTTGAATACTGAATACCAATATCATACCTAATGATAATCGAGCTAATGCG
AATCATCGAATGAAAATCGGGAGTAAATGGGACAACCTTGATAATCTAAA
ACCGTCAAAAAAAAAAGGACTGAACGAGCTTTTAGATGTCTATTTTGGGA
TGAATACTCTATTTCGATTAATTATTATCGAAAGCAAAATTTGTTCATGA
AGTATTCCCCAAAAGATAATTATAGATATTTTAACTATATCAGGTAATGG
TGGCTCAAAATAacacattgggctcttccagaaaaagttCGTTCccgggg
ggtggaggatatatgaatttttcaatgatctaccccttaacattttgact
tttcaccccctggacaagcgttttacccctggacatggcaaattcacccc
atggacatggtagtttttcaggatttttcgatacccctggacaatatatc
ttccaccccctattaagggtttttttctggaagagcccatttatAGGGAT
GATCGACACAAAAACCCTCACATTCTTtccatttttgtttgatttgtcaG
AATCATAATAAATACATCAAACCacttatttttccaaaattcttcCTGAA
AAGGTTTCCCCATTTTCCCGAGATTTTTTGGAATGAATTTGGAAAGTTTC
AAACATACATTTTAACAAAcattcattttaattttactgTACTGAG
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_004284XLOC_004284Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00007592-exon-sc0000078-1491911889:484369..484510TCONS_00007592-exon-sc0000078-1491911889:484369..484510Clytia hemisphaericaexon
TCONS_00007592-exon-sc0000078-1510915933:484369..484510TCONS_00007592-exon-sc0000078-1510915933:484369..484510Clytia hemisphaericaexon
TCONS_00007592-exon-sc0000078-1575043694:484369..484510TCONS_00007592-exon-sc0000078-1575043694:484369..484510Clytia hemisphaericaexon
TCONS_00007592-exon-sc0000078-1491911889:484939..484956TCONS_00007592-exon-sc0000078-1491911889:484939..484956Clytia hemisphaericaexon
TCONS_00007592-exon-sc0000078-1510915933:484939..484956TCONS_00007592-exon-sc0000078-1510915933:484939..484956Clytia hemisphaericaexon
TCONS_00007592-exon-sc0000078-1575043694:484939..484956TCONS_00007592-exon-sc0000078-1575043694:484939..484956Clytia hemisphaericaexon
TCONS_00007592-exon-sc0000078-1491911889:486033..486128TCONS_00007592-exon-sc0000078-1491911889:486033..486128Clytia hemisphaericaexon
TCONS_00007592-exon-sc0000078-1510915933:486033..486128TCONS_00007592-exon-sc0000078-1510915933:486033..486128Clytia hemisphaericaexon
TCONS_00007592-exon-sc0000078-1575043694:486033..486128TCONS_00007592-exon-sc0000078-1575043694:486033..486128Clytia hemisphaericaexon
TCONS_00007592-exon-sc0000078-1491911889:487056..487177TCONS_00007592-exon-sc0000078-1491911889:487056..487177Clytia hemisphaericaexon
TCONS_00007592-exon-sc0000078-1510915933:487056..487177TCONS_00007592-exon-sc0000078-1510915933:487056..487177Clytia hemisphaericaexon
TCONS_00007592-exon-sc0000078-1575043694:487056..487177TCONS_00007592-exon-sc0000078-1575043694:487056..487177Clytia hemisphaericaexon
TCONS_00007592-exon-sc0000078-1491911889:487616..487753TCONS_00007592-exon-sc0000078-1491911889:487616..487753Clytia hemisphaericaexon
TCONS_00007592-exon-sc0000078-1510915933:487616..487753TCONS_00007592-exon-sc0000078-1510915933:487616..487753Clytia hemisphaericaexon
TCONS_00007592-exon-sc0000078-1575043694:487616..487753TCONS_00007592-exon-sc0000078-1575043694:487616..487753Clytia hemisphaericaexon
TCONS_00007592-exon-sc0000078-1491911889:488044..488133TCONS_00007592-exon-sc0000078-1491911889:488044..488133Clytia hemisphaericaexon
TCONS_00007592-exon-sc0000078-1510915933:488044..488133TCONS_00007592-exon-sc0000078-1510915933:488044..488133Clytia hemisphaericaexon
TCONS_00007592-exon-sc0000078-1575043694:488044..488133TCONS_00007592-exon-sc0000078-1575043694:488044..488133Clytia hemisphaericaexon
TCONS_00007592-exon-sc0000078-1491911889:493123..493209TCONS_00007592-exon-sc0000078-1491911889:493123..493209Clytia hemisphaericaexon
TCONS_00007592-exon-sc0000078-1510915933:493123..493209TCONS_00007592-exon-sc0000078-1510915933:493123..493209Clytia hemisphaericaexon
TCONS_00007592-exon-sc0000078-1575043694:493123..493209TCONS_00007592-exon-sc0000078-1575043694:493123..493209Clytia hemisphaericaexon
TCONS_00007592-exon-sc0000078-1491911889:493825..494714TCONS_00007592-exon-sc0000078-1491911889:493825..494714Clytia hemisphaericaexon
TCONS_00007592-exon-sc0000078-1510915933:493825..494714TCONS_00007592-exon-sc0000078-1510915933:493825..494714Clytia hemisphaericaexon
TCONS_00007592-exon-sc0000078-1575043694:493825..494714TCONS_00007592-exon-sc0000078-1575043694:493825..494714Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000078supercontigsc0000078:484369..494714 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
48.2886	51.9617	25.1843	23.3912	18.0266	16.0927	14.8121	14.5949	5.90201	4.6969	5.22978	10.7717	7.80721	16.0562	8.86078	7.39212	14.2356	9.56766	0	1.09917	12.4803	5.21174	29.3828	18.5818	13.1437	14.7663	4.02848	3.35433	15.5149	14.7005
Blast
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BLAST of TCONS_00007592 vs. Swiss-Prot (Human)
Match: EXOS5 (Exosome complex component RRP46 OS=Homo sapiens GN=EXOSC5 PE=1 SV=1)

HSP 1 Score: 172.555 bits (436), Expect = 2.407e-49
Identity = 87/207 (42.03%), Postives = 135/207 (65.22%), Query Frame = 1 
Query:   76 MRELECELAFLSKCDGSAAFQHGTTKTLCAVYGPVEVKLNQEKVDRATLDCIIKPKVGLGSVKEKSLEAIVSKTCEEVALTTLHPRSAMQIVVQTLQDSGSLLACMLNASCMAMVHAGLPMKSLMVAVACCVCND-QIIIDPTLEEEENSVCGMTFAFGTKNFEMIASHTYGSFTVDQYMTCLENCRRVGKQIASFQRDSITRFLSK 693
            +R   CE   LS+ DGSA+F  G T  L  VYGP EVK+++E  ++ATL+ I++PK+GL  V EKS E ++  TCE V L TLHPR+++ +V+Q + D+GSLLAC LNA+CMA+V AG+PM++L   VAC + +D  +++DPT ++E+ +   +TFA  +   +++ S T G ++  +   CL   +   + +  F R+S+ R  SK
Sbjct:   28 LRHFACEQNLLSRPDGSASFLQGDTSVLAGVYGPAEVKVSKEIFNKATLEVILRPKIGLPGVAEKSRERLIRNTCEAVVLGTLHPRTSITVVLQVVSDAGSLLACCLNAACMALVDAGVPMRALFCGVACALDSDGTLVLDPTSKQEKEARAVLTFALDSVERKLLMSSTKGLYSDTELQQCLAAAQAASQHVFRFYRESLQRRYSK 234
The following BLAST results are available for this feature:
BLAST of TCONS_00007592 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
EXOS52.407e-4942.03Exosome complex component RRP46 OS=Homo sapiens GN... [more]
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