TCONS_00007590 (transcript) - C. hemisphaerica

Overview
NameTCONS_00007590
Unique NameTCONS_00007590
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length1847

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00007590 ID=TCONS_00007590|Name=TCONS_00007590|organism=Clytia hemisphaerica|type=transcript|length=1847bp
CAaagctataattcgaaccctggtATATTCACTGTACTATTTTTTAGGAC
AGAAAGATATATTAAAAGCTTGAAAAGTATTTTTGGTTGACTTATATGtt
taggaaatctgcaaatctgagcctttatatatgcttataaacgttatgct
tgtTTATCTTTCAgacaacaaaaaataaataaaatgaggGAGTTAGAATG
TGAACTTGCATTTCTTAGTAAATGTGATGGTTCAGCAGCATTCCAACATG
gtACAACCAAAACACTATGTGCTGTTTACGGACCAGTGGAGGTCAAATTA
AACCAGGAGAAAGTTGATCGAGCAACACTGGACTGTATTATTAAACCAAA
AGTTGGTCTAGGCAGTGTGAAGGAGAAGTCATTAGAAGCCATAGTCTCGA
AAACATGTGAAGAAGTTGCATTAACCACGCTCCACCCTCGATCTGCCATG
CAAATTGTTGTACAAACATTACAAGACTCTGGATCGttGCTGGCATGTAT
GTTGAATGCAAGTTGTATGGCTATGGTGCATGCTGGTTTGCCCATGAAAA
GTCTGATGGTTGCAGTAGCTTGTTGTGTTTGCAATGATCAGATCATCATT
GATCCTACCTTGGAAGAGGAAGAGAACAGTGTATGTGGGATGACGTTTGC
TTTTGGaacaaagaattttgaaatgatTGCTTCACATACGTACGGCTCTT
TCACTGTGGATCAGtaCATGACATGCTTGGAAAATTGTCGACGTGTTGGT
AAACAAATAGCTTCGTTTCAGAGAGATTCGATAACCCGTTTCCTTAGCAA
GGAAACAAACGAGGAAGAGACGGAGACCGAGGAAGAATGAATGAAAGGGA
TGAAAGATTCAAATCATGGGCGAATGAATTTTTGAAGGACGGAGAAAATC
TATGAATAACAAGAGAACTACTAGAGTACGCTGATGAGTAAATGCTAAAG
TGGAAATATAATCGAAAAATGGAATGGAATGGAAGTTAGACAAAATTTGA
ATACTGAATACCAATATCATACCTAATGATAATCGAGCTAATGCGAATCA
TCGAATGAAAATCGGGAGTAAATGGGACAACCTTGATAATCTAAAACCGT
CAAAAAAAAAAGGACTGAACGAGCTTTTAGATGTCTATTTTGGGATGAAT
ACTCTATTTCGATTAATTATTATCGAAAGCAAAATTTGTTCATGAAGTAT
TCCCCAAAAGATAATTATAGATATTTTAACTATATCAGGTAATGGTGGCT
CAAAATAacacattgggctcttccagaaaaagttCGTTCccggggggtgg
aggatatatgaatttttcaatgatctaccccttaacattttgacttttca
ccccctggacaagcgttttacccctggacatggcaaattcaccccatgga
catggtagtttttcaggatttttcgatacccctggacaatatatcttcca
ccccctattaagggtttttttctggaagagcccatttatAGGGATGATCG
ACACAAAAACCCTCACATTCTTtccatttttgtttgatttgtcaGAATCA
TAATAAATACATCAAACCacttatttttccaaaattcttcCTGAAAAGGT
TTCCCCATTTTCCCGAGATTTTTTGGAATGAATTTGGAAAGTTTCAAACA
TAATATATCATACATATCGTTGGTCGGTCAAAATATGGGCGACACCTTTG
CATtcatatatttatattttacctTGTACTGTTGTTTTTTGCTTACACGa
cataaactttaaaaaaagaaaagaatgctTGCTATTTGTCATCAATTTCC
ATACATAGTAATATCCTAAAACGTCTCTCAAAATTTTACATTCAAAC
Run BLAST on NCBI

transcript from alignment at sc0000078:484261..495041+

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00007590 ID=TCONS_00007590|Name=TCONS_00007590|organism=Clytia hemisphaerica|type=transcript|length=10781bp|location=Sequence derived from alignment at sc0000078:484261..495041+ (Clytia hemisphaerica)
CAaagctataattcgaaccctggtATATTCACTGTACTATTTTTTAGGAC
AGAAAGATATATTAAAAGCTTGAAAAGTATTTTTGGTTGACTTATATGtt
taggaaatctgcaaatctgagcctttatatatgcttataaacgttatgct
tgtTTATCTTTCAgacaacaaaaaataaataaaatgaggGAGTTAGAATG
TGAACTTGCATTTCTTAGTAAATGTGATGGTTCAGCAGCATTCCAACATG
GTAAGACTACATTTTATCTGTGGTTAGCTAGTAAAAATGgtgttcaaaaa
aaaaaaatctatttatgTTAGGGGGTCAATTTCAAAGGAATAATTGAATC
TATtagaatttttaatttaaaataaattcagaGAGAAGTGAGTTGTCAAC
ATGACATTAGaccaaataataaaataatagtATGAATTACTAAATAAGTA
AGATGACAGTGTTATAAAAGGCAATAGTAGTCAAAAGGATTACAACGCCC
CTACAAACAACTTTACACCTACTACTAGTATTACGAAACTTTTATCTTAA
TTATCTTAAGCTCAAAGAGCTAGCAAGACAAAATAACAAGCTGTCACTAA
TTATATTTGATAATTTGCAGGAACCTTTGCAAAGTTGTCTTTCACAAATG
TtataatgattgaaaattattttcaaaggtACAACCAAAACACTATGTGC
TGTTTACGGACCAGTGGAGGTCAAATTAAACCAGGAGAAAGTTGATCGAG
CAACACTGGACTGTATTATTAAACCAAAAGTTGGTCTAGGCAGtaattat
atcattttttacaatttctttatgTTTCAAATCATATGCGTTGTCTTATT
TGAAATATCTAGACATTCAATTAAAAAGATTATCATCTCTTCAATCTCTT
TACCTAAAAATGCTTGTGAATTTAGACATTTTTCATGTCTGGTTATCAGC
CAAACACCAGATTTCAAGAATTAtctgatataacatagtttccTTCCCTC
TTTCTGCTAGGGGAGGggttcaaaaaaaattccagaaaggggggggggca
aaaggAAAAATGGAAATCCAGGGGGATTTCAAAAAGGttcaacaaatttt
ttctggggcaagaacttttcaactttttaacagAAAGTCTTCTGTCACCT
TTTTAGTTCTTTTACATATGCATGTTTTTCTTCCTCAAATCACATGGTAG
ATGCTCTCTTTCTTGGATAGTTAGCAATTTATTTGTTTCTCTTGTGGTGA
CATTTTAAAAAGAACTACATTTTGTGTGCAATGCAAATGTCAGGTGCATT
GATTGTCTGGATCCAGGTCCGCAGGGTGGTGAAAAAAAGGCATGCAGGCG
GccaggaaaaagttttttctgctcCTTTTCATGAAAGTAAATTTAAACAC
AAANTTATGTTAGGGGGAATTTCAAAGGAATAAATGAATCTATTAGAATT
TTTATTTAGAATAAATTCAGAGAGAAGTGAGTTGTCAACATGACATTAGa
ccaaataataaaataatagtATGAATTACTAAATAAGTAAGATGACAGTG
TTATGAAAGGCAATAGTAGTCAAAAGGGTTACAACGCCCCTACAAACAAC
TTTACACCTACTACTAGTGTTACGACACTTTTATCTTAATTATCTTAAGC
TCAAAGAGCTAGCAAGCTGTCACTAATTATATTTGATAATTTGCAGGAAC
CTTTGCAAAGTTGTCTTTCACAAATGTtataatgattgaaaattattttc
aaaggtACAACCAAAACACTATGTGCTGTTTACGGACCAGTGGAGGTCAA
ATTAAACCAGGAGAAAGTTGATCGAGCAACACTGGACTGTATTATTAAAC
CAAAAGTTGGTCTAGGCAGtaattatatcattttttacaatttctttatg
TTTCAAATCATATGCGTTGTCTTATTTGAAATATCTAGACATTCAATTAA
AAAGATTATCATCTCTTCAATCTCTTTACCTAAAAATGCTTGTGAATTTA
GACATTTTTCATGTCTGGTTATCAGCCAAACACCAGATTTCAAGAATTAT
CTGATACAACATAGTTTCCTTCCCTCTTTCTGCTAGGGGAGgggttcaaa
aaaaaattccagaaagggggggggggcaaaatgaaaaatggaaatcCAGG
GGGATTTCAAAAAGGttcaacaaattttttctggggcaagaacttttcaa
ctttttaacagAAAGTCTTCTGTCACCTTTTTAGTTCTTTTACATATATG
CATGTTTTTCTTCCTCAAATCACATGGTAGATGCTCTCTTTCTTGGATAG
TTAGCAATTTATTTGTTTCTCTTGTGGTGACATTTTAAAAAGAACTACAT
TTTGTGTGCAATGCAAATGTCAGGTGCATTGATTGTCTGGATCCAGGTCC
GCAGGGTGGTGAAAAAAAGGCATGCAGGCGGccaggaaaaagttttttct
gctcCTTTTCATGAAAGTAAATTTAAAcacaaattaaaataaaaagtttt
gagaaatCTTCCGATCATCATATTGTAAACGCATAAagtcattttgcaaa
aaacgtgtaataggAAACTAAGCAAAAAAGAAATGAACAAATTGATAAAA
CTGCCGCTGGGTGacaacaaaaaagattttcaccGGGCAGGAAAGATTCA
AAACTGGCCATATAACGTCCACAGAAAAACgcttggaattttcactgaaC
TGTCCTTCTATCTAGAAACTAGCTTAGAATAGTTGTGCATCATTTCTAGG
aaagaataaaatctaataaacAATCAAATTAATTTATGATTCAAGGTGTG
AAGGAGAAGTCATTAGAAGCCATAGTCTCGAAAACATGTGAAGAAGTTGC
ATTAACCACGCTCCACCCTCGATCTGCCATGCAAATTGTTGTACAAACAT
TACAAGACTCTGGATCGGTAACTATGTTTCCaagtttattttgtttattt
tattttaatcacTATTTACATTATTTTTCACTATTCCAGAAGTACCCTGG
TACCCCCTGTAGTTAGGACTCCTGCTTTATTTATCGAGCTTTGGAAAATA
CCACCCCCTCAGTTTGATAGTTCCTAGCCCCTCTTCATTTAGTGGGTCTT
GAAACTCTTTATTTCTTAGctttcttattttcatattgAAAATGCCTCAA
TGTGTTATCCCTTGATTAcctttttgtaatattttttgattagaagtaac
atttttaaatttgaaattcgaTACGTTTACAGAACAACTTTTGtttagaa
tttttagatttaacctgtgattttttaaatttattcaaGAGTAAGATGGT
ATAAAAATCTATCAAATCTATTTCTTAGCAACATCATaatgttcttcttt
ttcagttGCTGGCATGTATGTTGAATGCAAGTTGTATGGCTATGGTGCAT
GCTGGTTTGCCCATGAAAAGTCTGATGGTTGCAGTAGCTTGTTGTGTTTG
CAATGATCAGATCATCATTGATCCTACCTTGGAAGAGGAAGAGgtgaaaa
ttttatgttttttcgtATTTGAATTTGCAAAAAGGAAAATGATTGATTTC
TGAGAACTTCTTGAACCTAAGCTCCTCAAATTGACTTCTTCTTTGAAAGA
ACATTGTagcttgtttttaagatttcaaTTTCTTCAACTCCCTCCTGCAT
ATGAGGTTAAATGGCTCCTTGTGATTCATTTCAGAAAAATTCTCTGCTTT
AGTCTTACTCCGTTTTACAGAAGTATCACCCAATTTTGATACCTGTTCAT
GGTGAATAATGACATACATACTTCTATTTCCAGAACAGTGTATGTGGGAT
GACGTTTGCTTTTGGaacaaagaattttgaaatgatTGCTTCACATACGT
ACGGCTCTTTCACTGTGGATCAGGTAAATTAGGTTTCTCTTTATTAATTC
TtcctaaatctaaaataaagaTACAGCCAGCTttttctctctaattcaat
GTTCTATTATTAGATACGATccattatttgataatattgaaagctaCGGT
CAACAAGAAATTAATGAAGGACGTTCTACTATTGGGAAAAGTTGAGGAGC
TGAACGGGTTAAGGATTCATTTTTGTGCGAGAATGGGCATGGCCGGCGTG
ACAATTTTTGCAGTTTTCTCTTAACTAAAGAGTGTAAAAAGATGATATAG
AGCGATACTAGTATGAAAAGTTTTTATTGGATAGCGAAAGGGTAACACTA
TAAAAGATACCCCGATTATTTTAATTTGATACAGTTCAATGGAAAAGACT
GATAAAAGGTTATGCACGGACAGACGTTATATACCGCAGTTTTgcataaa
ataaaaatctacaGTCTTTTGTAATGTGACGTAGATTTATCactgaaata
tttgacgtcaaataaaaaatcacccATATGAAAgtttctgcaaaatttta
aaaacttcaattGAGAGAAATCATTTCAGCGTAATGCCGAGTTGACTCTG
ATCCTGATTATTATCGTGAAAATTTTATATTGTATTTACAAAGTTAATTA
GTGTAAAAATGCTGTCAACATTGAAAGCAAACCGATGTGGCAGACATGAG
GAGAAGTGGCTTAAAACAGTTGTGGTTTACGAAGCTGATCTGGAACGAac
aagcaaaatttcaaaatcacgcAAGAAGCAAAAATACACTTCCTCCAAAA
AAGACTCACGCAAAGAAATTGTGAGccgaaatcaaaatgaaaatagcaAG
GGGAGAATAATTCAACTTCTTAACACGAAAGCAAGCTGTGGACAACCAAC
TTCATTGATCACCTTCACGGACAAGAATGGCGTGGAATTAACCGTTACTG
CCCAGAAGTTTAATCAGCTGAAAGAATGCGGTTTACTACCAGCGAACGCT
GTTCCAACCTTGCAAGATCCACCTACAAAAGCAACTTCACCTTTGAAAAG
TCAAGCTACAATCCAACAGTTGATCACCTTCACGGATAAGAATGGCGTGG
AATTAACCGTCACTTCAAAGAAGTTCAATCAGCTGAAAGAGTGCGGTTTA
CTTCCACCAAACGCCATTCCACCCACGCAAGATCGGCCTAACAAAGTGAC
TACTCCTTCGAAAAGTCAAGCTACAAGCCAACAGTTAATCACCTTCACGG
ACAAGAATGGCGTGGAATTAACCGTCACTCCAAAGAAGTTCAATCAGCTG
AAGGAGTGCGGTTTACTTCCATCCAACGCCATTCCACCATTGCAAGAACC
GCCTACTAAAGCGACTACACCTTCGAAAAGTCAAGCTACAAGCCAACAGT
TAATCACCTTCACGGACAAGAATGGCGTGGAATTAACCGTCACTTCAAAG
AAGTTCAACCAGCTGAAAGAATGCGGTTTACTTCCACCAAACGCCATTCC
ACCCTCGCAAGATCGGCCTAACAAAGTGACTACACCTTCGAAAAGTCAAG
CTACAAGCCAACAGTTGATCACCTTCACGGACAAGAATGGCGTGGAATTA
ACCGTCACTTCAAAGAAGTTCAATCAGCTGAAGGAGTGCGGTTTACTTCC
ACCCAAGGCCATTCCACCCTTGCAAGAACCGCCTACTAAAGCGACTACAC
CTTCGAAAAGTCAAGCTACAAGCCAACAGTTAATCACCTTCACGGACAAG
AATGGCGTGGAATTAACCGTCACTTCAAAGAAGTTCAACCAGCTTAAAGA
ATGCGGTTTACTTCCACCAAACGCCATTCCACCCTTGCAAGATCAACCTA
ACAAAGTGACTACACCTTCGAAAAGTCAAGCTACAACCCAACAGTTGATC
ACCTTCACGGATAAGAATGGCGTGGAATTAACCGTCACTTCAAAGAAGTT
TTATCAATTGAAAGCCAGCGGTTTGATTCCATCAAACGCCATTCCACCCT
TGCGAGATCTGTCAACCAGGGCCGCTCCACCTTCACAAAACGTGTCGAGC
TCAGTCACCGAAGAATACTTCGAGCTGAAGCAACACGAACAAAACAAAAG
TGAAGACGCAAAATCACTTCAAGCCCTCCTCGAACTAGCAAAAGGTGACA
TTTCAAAAGAGCGTATCAACTTCTACAAAGAACTAATAAAGGAAGCTCAA
GAAGCTCCTTTACCAGATGACGATGGTCAATGGTAAAAGTTGACACgaac
gaaaaataaacaaaaaacatttaataaaaaccaaaaatctttaaaaatcc
tGTATTGTTTTTACATAATGTAAATATAACTCCGTATATATAATCACGTT
GTCAATCATCTTAATTTTCAAATCCTAAAAGTATTAATGTTTATTTATGG
CATGCTATACAAAATTGATGCCAAAATGAGGTCTTTAGCACAAAAATcaa
taatatcattatggaAAATCTTGTATCTAACTCTGACATCTCAAAGTCTG
TTAAACTATTGTTTTAactgaaatcatgaaattgacgCAAAGCAGATATC
TTTTCCCGGATATTTCACGATTTGCAACCCACATCTTTACAGATTCTAGC
CGACTTTATTAGTAGTTGTTGTCCAGGGAAGAGAAAATTATATACAATAC
AATCTGAAACCCAAAACTCGTATCGAgtattttcataacttatttgaAGT
ATCGGcgtaaaaatatttaataaaccTTTTTGTATCCTGTACTAtaaact
ttcaactttcaatcCTTTCAACTTGTACATTTGAATTTCTGAATTAACGA
AAGTAGCTCCCTCGTCAaggaaagggggggggggtctatTAGAAAATAAC
CcaagaatttgaaaattgaatcttCGAATAGCCTTTTACTACAACATTAT
TGAATGTGCTTATTTATTGTGTATTTACTATGTATAAGAATTAAAACTct
ttaataaaaattataaactGAAGTTAAAGCTAGTGCAATATCTCAAGTCA
AAGATTATTCTTAATCACCACATCTTAGATGGGAGCATATTGTTCGAatg
gactttttcaaaacatccaAAATCAACTGATTCCTTATTGCTATGGAAAC
AGGTACCAGAGTGAAATTGAGGTTCATGAATAAATCTGCTACCATGACAA
CTGTCCTGTTAGGTTCTTCCGGTGAGCCTCGTTTTAATGCCCGCACTAAC
CGAAATATTTCCGGTATACTGCACACGATATATGAGGTGGACAGTAACAT
GACTGTATTGATCATTGTTCGATTTGTTTTCCGATTCAAATGCCGAATCT
TCTTGGAGCTGATGGCTCTGGTGTTGTTGTTGATACTCAGATTGGGAACA
GAATTCTCCTCTATGGCTGATGGTATTTGAAAAGAGAAAGCTGTCCGTGA
GTTGTAATAACCACCTGATATAGCGGTTGAAGATGTCGCCCCTGAGCCGG
AGGTTGTATCTTTCGAAATGGCTGTTGCGGTTTTGCGTCGATGTCGAATG
ATGACTTTGTAGATATAAACATTTGTTAAAAGGAGAGCGCTACTTGTTAT
TACCATGGCAACAAAAGCTAAGGTACCAGTTACCAAGAAggcttctttgt
ttttattcaatgtcATGATAAGTGCTATACAGAACGAGAAACAGGGGAAA
GCGAAAATAGAAATCGAAATCCAGAACACTTTCCTATCCGTCAAAATGAC
AGTATAGCGCAGAGGATGTCGTACGCTGACGTATCGGTCTAAATTGATCG
CCGTGTATGAGAAATTGCAAGCGATTAAAAATGAATCGTAAACGGTGTAC
GTGTAAATTGAAATCTGATGTATGGATGCCGATTCAAGTAGATAGTCTAT
TTCGGTGATGAAACTGATCAGAGATATCAAGATTTGTGAGATGAACAAAT
TCTTCATTAATACTATTGGGATACGAGTGGACAGCTCGTGGCGGTAGATA
TATAGCGTGATTGCTAGGGCGCTGTTACATATGAAGGAGGTATGAATCAA
TACCAAACTAATTATCCCAATTACTGACATGACTATATCCTCGGTCGATT
TCCAATTGTTAACCATGAAGGGGTCGTCTCCTGTCGGTTGATGGAGATGA
TCTTTTTTAAGACAAGCCTTGAATTTGGCTGCCCTCTTCTTCGCCGAATA
AATATAATAATCGTGAAACTATTTGCACTATATTGGAATTGTAGAATTCA
ACAATCTTGAAGCCTCTCTGCTCTCAAGATCTCAACCACAGCATTACACC
CAATTATCCAAACGCAAGTGTGATTTAtgaattttctaaatatttttctt
tgttacaTTGTAACTTCTTCCTGACTTAATATCAACCGTCTTTTCAGAAA
GAAATGTCTTGGGGTATTCTGTCAGTATTTAGCCTCAGCCtctaaagttt
ttttatttctccTTTTGACCGATTTGAAATCTCTGCAACACAGGATAGGT
CGATATTGTATTGTTTACCTACACTTTGTGATGTTTTTGACACTTGCTCC
TTTTCGAAATTCCTTTTGTTTTCCTTAAAATCCCCATCTTCCTTTCACAC
TCAAacattttaacaagtttttccttttttgacaGTTGTATATTTGATCA
TGTGTATTTGTTCCTTGActtttacaaaaacttttccatgttcCTTCTTT
CAGTATTAAATATTTAGCTATGCAGTTTCTTTTTACTTCTCCTCTTTTGC
TTAGACGAGCCTTCTGCTATTCTCTTTTAAGTCAGCAAAAACCTCTTCTC
GAGTTTTCTCTCTTATTTCTTAGCGACACCATTCTGATTTTCAGACCTGA
ATTTTTATAAGATGGTGAATGCTACGGCCTGCTTACTTCCTTAGCACTTG
ATGTTACATACATACACCTGCCCCTTAGTTTACGTGATTaattaaaaaag
tgaaacaaaatgaatatatcaaattaataaatttcaattaaaatatcaat
caaatttATTAGATAGTTGTCCTAAATATTTTCttaatcaattttcatat
tttttcttttagtaCATGACATGCTTGGAAAATTGTCGACGTGTTGGTAA
ACAAATAGCTTCGTTTCAGAGAGATTCGATAACCCGTTTCCTTAGCAAGG
TAACATACATAACAATTACAacaaaccagctgcgctggaaggtcagccca
attACAACAACAGTCACGATATACATCTCAAATGACCACACCCAAACCTA
AATTTGAACTAAATTTTGATCCCTAAACACTTATTTAGtgataaacaaaa
tgaaaataactttcaatCCTATTACTACCAAGCTTTTTGGTCAGGTCAGG
TTATGAcgttatcattttttttaattattgttTCCGCTGAGATATCTAGT
GAATatctaaaacctgtcaaaatgtGAGGTTAAATGGATAATTACAATAT
GTATATCCAAAGTCATGCTAAATTTTAAGATTCTATAATTCTCAGATTCT
ATAATTCTcagattttacagggttttagctggattttaacATTCCTCAAT
AAAAAAAACGTCATAAAATCTGATCTAGCTGGtatatgattaaaaaattt
ggtATTATATGTTGCCGAGAAGAATatattaaaagtaaaaaagttttctt
ttcacttactaGATATTAACGAATTAGATATTGAAGCGTCAGGGTGGCTG
AAAACATACCCcttaataaaaataattaagtGGTTCTTTTATCAATTGTT
TATTTCTTCCCCAGGAAACAAACGAGGAAGAGACGGAGACCGAGGAAGAA
TGAATGAAAGGGATGAAAGATTCAAATCATGGGCGAATGAATTTTTGAAG
GACGGAGAAAATCTATGAATAACAAGAGAACTACTAGAGTACGCTGATGA
GTAAATGCTAAAGTGGAAATATAATCGAAAAATGGAATGGAATGGAAGTT
AGACAAAATTTGAATACTGAATACCAATATCATACCTAATGATAATCGAG
CTAATGCGAATCATCGAATGAAAATCGGGAGTAAATGGGACAACCTTGAT
AATCTAAAACCGTCAAAAAAAAAAGGACTGAACGAGCTTTTAGATGTCTA
TTTTGGGATGAATACTCTATTTCGATTAATTATTATCGAAAGCAAAATTT
GTTCATGAAGTATTCCCCAAAAGATAATTATAGATATTTTAACTATATCA
GGTAATGGTGGCTCAAAATAacacattgggctcttccagaaaaagttCGT
TCccggggggtggaggatatatgaatttttcaatgatctaccccttaaca
ttttgacttttcaccccctggacaagcgttttacccctggacatggcaaa
ttcaccccatggacatggtagtttttcaggatttttcgatacccctggac
aatatatcttccaccccctattaagggtttttttctggaagagcccattt
atAGGGATGATCGACACAAAAACCCTCACATTCTTtccatttttgtttga
tttgtcaGAATCATAATAAATACATCAAACCacttatttttccaaaattc
ttcCTGAAAAGGTTTCCCCATTTTCCCGAGATTTTTTGGAATGAATTTGG
AAAGTTTCAAACATACATTTTAACAAAcattcattttaattttactgTAC
TGAGGATGGTTCTCTGTTGAGAAGCCGAAACGTTtacttgaaataaattt
taccaaaaatgaacATGAAGCTTCTGTCAACTATAAACTTTACACTTAAG
TTGTATGAAAGGATTGATTTGTTTAATTCAAACATAATATATCATACATA
TCGTTGGTCGGTCAAAATATGGGCGACACCTTTGCATtcatatatttata
ttttacctTGTACTGTTGTTTTTTGCTTACACGacataaactttaaaaaa
agaaaagaatgctTGCTATTTGTCATCAATTTCCATACATAGTAATATCC
TAAAACGTCTCTCAAAATTTTACATTCAAAC
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_004284XLOC_004284Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00007590-exon-sc0000078-1491911889:484261..484510TCONS_00007590-exon-sc0000078-1491911889:484261..484510Clytia hemisphaericaexon
TCONS_00007590-exon-sc0000078-1510915933:484261..484510TCONS_00007590-exon-sc0000078-1510915933:484261..484510Clytia hemisphaericaexon
TCONS_00007590-exon-sc0000078-1575043694:484261..484510TCONS_00007590-exon-sc0000078-1575043694:484261..484510Clytia hemisphaericaexon
TCONS_00007590-exon-sc0000078-1491911889:484939..485052TCONS_00007590-exon-sc0000078-1491911889:484939..485052Clytia hemisphaericaexon
TCONS_00007590-exon-sc0000078-1510915933:484939..485052TCONS_00007590-exon-sc0000078-1510915933:484939..485052Clytia hemisphaericaexon
TCONS_00007590-exon-sc0000078-1575043694:484939..485052TCONS_00007590-exon-sc0000078-1575043694:484939..485052Clytia hemisphaericaexon
TCONS_00007590-exon-sc0000078-1491911889:487056..487177TCONS_00007590-exon-sc0000078-1491911889:487056..487177Clytia hemisphaericaexon
TCONS_00007590-exon-sc0000078-1510915933:487056..487177TCONS_00007590-exon-sc0000078-1510915933:487056..487177Clytia hemisphaericaexon
TCONS_00007590-exon-sc0000078-1575043694:487056..487177TCONS_00007590-exon-sc0000078-1575043694:487056..487177Clytia hemisphaericaexon
TCONS_00007590-exon-sc0000078-1491911889:487616..487753TCONS_00007590-exon-sc0000078-1491911889:487616..487753Clytia hemisphaericaexon
TCONS_00007590-exon-sc0000078-1510915933:487616..487753TCONS_00007590-exon-sc0000078-1510915933:487616..487753Clytia hemisphaericaexon
TCONS_00007590-exon-sc0000078-1575043694:487616..487753TCONS_00007590-exon-sc0000078-1575043694:487616..487753Clytia hemisphaericaexon
TCONS_00007590-exon-sc0000078-1491911889:488044..488133TCONS_00007590-exon-sc0000078-1491911889:488044..488133Clytia hemisphaericaexon
TCONS_00007590-exon-sc0000078-1510915933:488044..488133TCONS_00007590-exon-sc0000078-1510915933:488044..488133Clytia hemisphaericaexon
TCONS_00007590-exon-sc0000078-1575043694:488044..488133TCONS_00007590-exon-sc0000078-1575043694:488044..488133Clytia hemisphaericaexon
TCONS_00007590-exon-sc0000078-1491911889:493123..493209TCONS_00007590-exon-sc0000078-1491911889:493123..493209Clytia hemisphaericaexon
TCONS_00007590-exon-sc0000078-1510915933:493123..493209TCONS_00007590-exon-sc0000078-1510915933:493123..493209Clytia hemisphaericaexon
TCONS_00007590-exon-sc0000078-1575043694:493123..493209TCONS_00007590-exon-sc0000078-1575043694:493123..493209Clytia hemisphaericaexon
TCONS_00007590-exon-sc0000078-1491911889:493825..494672TCONS_00007590-exon-sc0000078-1491911889:493825..494672Clytia hemisphaericaexon
TCONS_00007590-exon-sc0000078-1510915933:493825..494672TCONS_00007590-exon-sc0000078-1510915933:493825..494672Clytia hemisphaericaexon
TCONS_00007590-exon-sc0000078-1575043694:493825..494672TCONS_00007590-exon-sc0000078-1575043694:493825..494672Clytia hemisphaericaexon
TCONS_00007590-exon-sc0000078-1491911889:494844..495041TCONS_00007590-exon-sc0000078-1491911889:494844..495041Clytia hemisphaericaexon
TCONS_00007590-exon-sc0000078-1510915933:494844..495041TCONS_00007590-exon-sc0000078-1510915933:494844..495041Clytia hemisphaericaexon
TCONS_00007590-exon-sc0000078-1575043694:494844..495041TCONS_00007590-exon-sc0000078-1575043694:494844..495041Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000078supercontigsc0000078:484261..495041 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
4.56952	4.19385	1.97806	3.275	2.48716	1.49041	1.6228	2.31966	0.56622	0.555984	0.204226	0.399782	0.491565	0.835356	0.496005	0.327568	0.706194	0.568708	0.179589	0.224231	1.1694	1.3309	1.54085	2.31139	1.37069	2.57539	0.368544	0.589971	0.820423	1.29176
Blast
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BLAST of TCONS_00007590 vs. Swiss-Prot (Human)
Match: EXOS5 (Exosome complex component RRP46 OS=Homo sapiens GN=EXOSC5 PE=1 SV=1)

HSP 1 Score: 172.555 bits (436), Expect = 6.376e-49
Identity = 87/207 (42.03%), Postives = 135/207 (65.22%), Query Frame = 1 
Query:  184 MRELECELAFLSKCDGSAAFQHGTTKTLCAVYGPVEVKLNQEKVDRATLDCIIKPKVGLGSVKEKSLEAIVSKTCEEVALTTLHPRSAMQIVVQTLQDSGSLLACMLNASCMAMVHAGLPMKSLMVAVACCVCND-QIIIDPTLEEEENSVCGMTFAFGTKNFEMIASHTYGSFTVDQYMTCLENCRRVGKQIASFQRDSITRFLSK 801
            +R   CE   LS+ DGSA+F  G T  L  VYGP EVK+++E  ++ATL+ I++PK+GL  V EKS E ++  TCE V L TLHPR+++ +V+Q + D+GSLLAC LNA+CMA+V AG+PM++L   VAC + +D  +++DPT ++E+ +   +TFA  +   +++ S T G ++  +   CL   +   + +  F R+S+ R  SK
Sbjct:   28 LRHFACEQNLLSRPDGSASFLQGDTSVLAGVYGPAEVKVSKEIFNKATLEVILRPKIGLPGVAEKSRERLIRNTCEAVVLGTLHPRTSITVVLQVVSDAGSLLACCLNAACMALVDAGVPMRALFCGVACALDSDGTLVLDPTSKQEKEARAVLTFALDSVERKLLMSSTKGLYSDTELQQCLAAAQAASQHVFRFYRESLQRRYSK 234
The following BLAST results are available for this feature:
BLAST of TCONS_00007590 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
EXOS56.376e-4942.03Exosome complex component RRP46 OS=Homo sapiens GN... [more]
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