|
|
Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00007555 ID=TCONS_00007555|Name=TCONS_00007555|organism=Clytia hemisphaerica|type=transcript|length=941bp
CGGACGGGGAGTTCATAATTCGGACAACACCTTCTATCGAACATGAATAC
ATTCTGAAAGATTTATTATTGACCAATCCACACAAATTCGTTGAAGAATG
TCTTTGGAAATGGATCGATGACCATTCGTAAGCATTTTAACTTGCTTCAT
CGAATGTTGTGTTATCACCCCCAATTACATCAGACTGTTTTGATTTGTCT
CTACTATTGAGCAATTGAAGAATACCTTTTGGTAACGGAATGCTGAGTAA
TCATAAGAACGCTACTTGTATCTTCTTTAAAAACTTATGAAATTCCATGA
ACGAAAAATTGGGTCTGGATGACGGTTCTTATCTGAGGTAAATACTGTGA
GTGACGTCATTTATTTGTCTCGATTCATTTGGTACTTGGTTGAGTTTTTC
GTTTGTTGAATGGAAGGTAAGTGAGGCAAAAAACAATGAACTCGATTATG
GTAATTAGACTGCATCCGAGACACAAGCCCAAGCTTCCACCAATTGTTGC
TGAAAGTTGAATGAAAAATTGCATGGTCAGCACATTTCTTGTCAAAGAAT
TAGAGgtatcaatatttttatatttctaCCTTGTTGAAGCATTATTGTTA
GGGATTTTCAAAACTATAACATGCTATTTTAAAAAGAAGATCAGGCTgga
attattttatgttttaattttctggTCAAGAAGTGTGTACATTTATTGAT
CGCCTCAAGCTTTCAACTGCCGTGTACTGACGTGAATTCTCTACAAAGGG
ACTTAAAATTCTTACTCTATTGTGCATATTTTGGACGATAAAATTTCTCA
CCTAACAACACTTTCCAATCTACGGATGGcgttaatttttcttttgtata
aATCACATCTGCGAAAGCGATATTCAGACCTACAACATTATGGCTGAAGA
TGTAAAGAGATAGATGGAAGACTTTATTAATTAGATAATCC Run BLAST on NCBI transcript from alignment at sc0000078:153905..154845+ Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00007555 ID=TCONS_00007555|Name=TCONS_00007555|organism=Clytia hemisphaerica|type=transcript|length=941bp|location=Sequence derived from alignment at sc0000078:153905..154845+ (Clytia hemisphaerica)
CGGACGGGGAGTTCATAATTCGGACAACACCTTCTATCGAACATGAATAC
ATTCTGAAAGATTTATTATTGACCAATCCACACAAATTCGTTGAAGAATG
TCTTTGGAAATGGATCGATGACCATTCGTAAGCATTTTAACTTGCTTCAT
CGAATGTTGTGTTATCACCCCCAATTACATCAGACTGTTTTGATTTGTCT
CTACTATTGAGCAATTGAAGAATACCTTTTGGTAACGGAATGCTGAGTAA
TCATAAGAACGCTACTTGTATCTTCTTTAAAAACTTATGAAATTCCATGA
ACGAAAAATTGGGTCTGGATGACGGTTCTTATCTGAGGTAAATACTGTGA
GTGACGTCATTTATTTGTCTCGATTCATTTGGTACTTGGTTGAGTTTTTC
GTTTGTTGAATGGAAGGTAAGTGAGGCAAAAAACAATGAACTCGATTATG
GTAATTAGACTGCATCCGAGACACAAGCCCAAGCTTCCACCAATTGTTGC
TGAAAGTTGAATGAAAAATTGCATGGTCAGCACATTTCTTGTCAAAGAAT
TAGAGgtatcaatatttttatatttctaCCTTGTTGAAGCATTATTGTTA
GGGATTTTCAAAACTATAACATGCTATTTTAAAAAGAAGATCAGGCTgga
attattttatgttttaattttctggTCAAGAAGTGTGTACATTTATTGAT
CGCCTCAAGCTTTCAACTGCCGTGTACTGACGTGAATTCTCTACAAAGGG
ACTTAAAATTCTTACTCTATTGTGCATATTTTGGACGATAAAATTTCTCA
CCTAACAACACTTTCCAATCTACGGATGGcgttaatttttcttttgtata
aATCACATCTGCGAAAGCGATATTCAGACCTACAACATTATGGCTGAAGA
TGTAAAGAGATAGATGGAAGACTTTATTAATTAGATAATCC
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00007555-exon-sc0000078-1491911889:153905..154845 | TCONS_00007555-exon-sc0000078-1491911889:153905..154845 | Clytia hemisphaerica | exon |
| TCONS_00007555-exon-sc0000078-1510915933:153905..154845 | TCONS_00007555-exon-sc0000078-1510915933:153905..154845 | Clytia hemisphaerica | exon |
| TCONS_00007555-exon-sc0000078-1575043694:153905..154845 | TCONS_00007555-exon-sc0000078-1575043694:153905..154845 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000078 | supercontig | sc0000078:153905..154845 + |
Blast
The following BLAST results are available for this feature:
|
