TCONS_00007551 (transcript) - C. hemisphaerica

Overview
NameTCONS_00007551
Unique NameTCONS_00007551
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length2151

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00007551 ID=TCONS_00007551|Name=TCONS_00007551|organism=Clytia hemisphaerica|type=transcript|length=2151bp
AACGAGCAAACGACCAGCAGAAAGAGTTGAAGcaagctttttttctacct
TTTTTTAGTAAATATTCTTCTTGCACATTGTACTGTCAGACTGTGAAATG
CCAGACATGGATGAAGAAAATGCACCAAAAGCAATTTTAACCTCGATGGA
AGTCAAAGACATTATTGCTTCCAGTTATGGAGAgAATGGTAAACGTTGTT
ACAAAGTGCAATGGAAGGAGAGTTGGGTTTTTGAGGAGCATTTGGTCAAT
TGCAAACAGTTGCTGGCGAAATTCTGGAAAGAAAATTCCAAAGGTGCAAA
ACAACAAACTAATGGAAATTTTGCCACACCAATACCAGAAAATGGCTTGC
CTCAAAGAGGTCCAACAATGAGTTCTAGAAAGCGTGATGCAAAAGGAAAA
GCAAAGGTGAACATTGAAGCGATGGCTAATCATTTGAAACAAGGTTCCTC
TTCAAAAGGCCCTTCAAGTGCCACTGAAATGGATGGTGTGTGGGTGTTAG
ATTCAAATCATGGAAGTGATAATGAGAGTGACTTTGAAGCTGGAAGTGAC
TTTGAGGACGAAACTATCAAGTCATCTAAGAAGAAGAATTTCACGCCCTA
TGAACTAAAGTGCGATGTCTGTGAGGCAGAATTCAGAAAAATAACTGAAT
TTCGCAAACATTACGCCAGCCAACATCCAGGAGTCAATCCATTTGATTGT
GAGGTTTGTCACCAGCGCTTTGGTAAGAAAGAGAATCTTATGCGTCACAT
GATGAAACATACTGGGGAGTACCCATATTTCTGTAATTTCTGTGGTAAAA
CCGCCGCTGACCCTTCTACCCTTCGCAAACACGTCGAAGCGAAACACAAA
ATTGAAGCTAAAAATGCTAACACTGGTATTAAAAAATCAACACCAAATAA
AAACAACGGGTCGCAAGCTTCCATGATCTGCCATATTTGCAGTAAAGAGA
TTGAAACCATCAAAGCTTTCAAGGAACATTTTCGTGCTGAGCACCCTGAT
ATGAAGCCCTTCCAGTGTGATATTTGTGGGAAAGGATTCGAAAAGAAAGA
GAATTTGACCAGGCATATCCGTGTTCACACAAATGATAGGATTTATTCTT
GTGACCTGTGTGGTAAAAGTTATACTGATGGTTCCTCCttgaaaaaacac
gtcaaaatgCAAATCTGTATATTGAACAGGCGTTCGGGTAAGAAAGTTAC
TAAAGCTGTAGCTGAAGTGATCAAAACGAGAGGAGACGTTGCGAGTGCAT
CTCAGGTCGATCTATCTTTTGGTAAAAGTGAAGATGAAGTTCAGGTTACT
GATTCACAGGCTATTTCTGAGGGAAATTCTCAGTCTAATGACATGGAAAC
AGAAGCACAATTTATCATTGAGGGTTCAACTTCTCAACAACCAGGCGAAG
AGCAGAATGAAGAATCGCAACAAAAAGAACGAGTGAACTCCATAGAATCT
CTCTTACAAACGATAAAACAAGTCAATGAACTTGGAACAGTTGTTCAATC
TAATGGAGGCACAGATTCGGAACAAGTTGCTGAAATGTCATCTCGTATTG
TCTTCCCTACCATCAATATTCCCAAAGGTTTTGAGAAAGGTGATGGAGGC
TCCTGATTCCTTCACTGCATGAAAATTTCCATTAACCTTGTGCAAGTTCT
ACTCTCAAAAGTGATGGAATTACCTTTTAAAAAGATCGTgtataatattt
aaaaactttatttctAAGCTGcatttataattttaattttttatttcgtt
ttgatgatatttttattcaatattaATCATTATTTGAGTGTATATACTTC
AGTTTTAGCTTTCATTATATTAGTTAACCTATTATGCTACATTAAGGGAA
CGTtcggcgagaacttattttggcgaatttgatTCCCTAAACTTAAGCCT
AGTTTTTCTCGATAACACTCATTTTTATGCAATAATAGAACTAATTTCAC
TCTTCTAATGCCGAAATAAGATCgcgccaaaattgaaaaatttgcccctc
gcaatttaattttttaaggatttttgctGCTCGCCGAAATTAGTTCTTTC
TAGAATTAGTTCCCCTTAAgatatttttacttttgtttatcGGAGCTTTG
GAAATTTGTTAAAGCTTTTAACAGGCTTTAAGGCGTGGTCTTTCTCagaa
t
Run BLAST on NCBI

transcript from alignment at sc0000078:131343..148962+

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00007551 ID=TCONS_00007551|Name=TCONS_00007551|organism=Clytia hemisphaerica|type=transcript|length=17620bp|location=Sequence derived from alignment at sc0000078:131343..148962+ (Clytia hemisphaerica)
AACGAGCAAACGACCAGCAGAAAGAGTTGAAGcaagctttttttctacct
TTTTTTAGTAAATATTCTTCTTGCACATTGTACTGTCAGACTGTGAAATG
CCAGACATGGATGAAGAAAATGCACCAAAAGCAATTTTAACCTCGATGGA
AGTCAAAGACATTATTGCTTCCAGTTATGGAGAggttgtttttatttctt
tgtttgacAACAAAATCAGATTTTTTAATAGAAACTAGTTAAACgttttt
ctaaagaattttCCATATTCACCATGTTGTGTTCAATTGATTAAAAAAGT
CTAGCCTACATCTAGCATAAAGTATGATATTATTGTTGCTGTTTACCATA
GAACTTTTTGTGTGCTTACCATTTTAAACCCATTCAGGCAGGGgttgacg
aacttttccaggggggtctgaactttgattttccaaggggtttttggtca
ttttcagattttccagaGGTTATTAAAGGTTCCCAGGGGGTTCTCCCCTC
CTCCCAAACTGGCATCAATAGTCACTTTCCCAGCCCtcacaaaatttcac
ttgccAGGGCAGGGGTGTCGACTCGGAAAGATCTAgtttcaatcaccaat
tccgcccttctcctctttttctctatttcctatctctaactctgtttttt
ctgatttctggacttggttttttctgaatttgactATTTGAAGCTATTTT
GCTAATTCTGAAACTATACTCCCACACCTCGGTGcggttcgaaccaccaa
atgcaagcaaccttggtttccaAACCTGACGCCTTACCGCTTGAGCTATC
Gtcgcacagcaaaatcacgcaattcataacatattataccaaactggcaa
aagacgggggtaatgttattataatatgggtaaaattacCCCTTTTTaga
cctgactgaaattcgagcttTCCAggggtatataacactgtggacacggg
ctagacggcaaattggtaaaatgccgaacgttttgcaacattttgaaaat
tgtttgccgacgggagaaaaaaaNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNaatcgctaattctagttctttcattttcatgtagtttttttaact
tttttgcttctttaacatgggaatgtcccaaaaaaaagtttttatttttg
ccgaaatttttttttctttcctaccaccttttttgactcatttcaacctt
ttccaagctattttcttcaaaaacaaaaataaaacaatgcaatgtcttct
tttttcaaaaaaagatatatctttcgttattttgataaatatactaaata
ttttacaaatatttttatataataatattttgacaccatcaaagaattct
ccctccaaatttgaggtctctagctacactagaaaaagagatatgcaaaa
tttaagaagcatgcctggaaaatttcttttttttcttttttgacacattt
ttcgaatttttccaagctattttcctaaccttttttttgacatttttagt
caaatttttgacactaaaatttgaatatctttacaaccactaatcctctg
CCTATGACCcctaattttctttctttttcaaagctctacaagataggata
gattttgaaaaaaaaattaaaacttgaaaaatcttctggagttgctatct
TTGTTCGATGATGTTCGATTGATgatgttcgatgagttcgatTTAAGTTC
GATGAAAGTTCGATAATTGTGTCcgattgattctacttttctttaacctt
tcagaaaattacgaggttgtttaatcaaaacacaggcaACAGGCACAGTA
TGCTTCACTCATTATtgctcatttgaaataatagagatgacactttcttt
gaagaaaataataaaaattaaaatcttttttttacaaattaacgaccaaa
gagcttgtaaaagctccagcttgtcccatccaATGGGATAGAATAAGGAT
GTCCCGCGAGAATGGCCCGTGGTTGGCCGCCAATACGCCTtcggaatata
aataaaaaattcggcggcaaggtataaatcgatttaatcgaatcaatcaa
acttcattgATCTTAATCGGACTGATCGGACCTCAATCGTATTCATCGAA
CTGCGATCGAACTATAATCGTATAATCGAACTGTCATCGAACTTTATGAA
AGTTTTCCCGgttcgataggtgttcgattgggttcggtaatcgaacagct
attgttcgatagggttcgattaagttcgattagttcaataatcgaacagt
tcgattgacaccgcctggcccaggggatagtttgttatcaaaaatttcca
ggggggttagtgaaaaaGGTTCTTCGATACCCCTGTACAATTTTAGAATA
GCCCAATACAGACTTTATACCTTTGCAGACCAGATGCCATCCTGAGATGG
TTGACCTGTTAGGACCCTCCAGGCGCTCCAAAAACTTCTCAGAGTTTTCC
AGAGCAGctaaaaaaaacactatttttctctccgAAAAGTTCCGGAGCTC
TTTCGGTGCTTCCGGACCAAGTGATCTTTACCGTCAACTACTCTAACTTg
agactacacgttttttttaagaactagttttaccaagcagcctcaatgtt
tcttaagaaatcggtcTTTTGAGCCGTAAATGTTTCTTatatgtttctaa
actttttgacataatcagcctcatggaaggctggattggaaggttcttaa
gaaaaaccgaattaaaaaatgttattttctcNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNaattaaaaaatgttattttctcattctcagcctcagc
atgtttcttagatgtttcttagtttttaggcattctgagcctcatgtttc
ttaaaaaaaaaatgtgcatCTGACAAGACATGAAACGGCAATTTGACCAC
CATTTCAACAaacttccaaagtcatttgatttgagttaatgaacggcact
caaaaatacacgatttctcttttgcatcaagtaggcttttaaatcgaatg
GAATCCGTAATGGTAGGGAACAATAtcacttcaaagaaatttgggtccat
gtctatAGCCATTTCAGAgcagtttttagtcaaaaatggagtttttgctt
gaaatgttgcattttagccagttttagcacatatttcatttccataatgg
cggacatacccttatcctaaacccaaagaattttgatttccctggagtat
tttcagaaggctatcactgcaaaaagattttaggttcatgtttattgccg
ttttagcaggaatttcaattccaaaatggtggatatacccaaatcccaaa
cccagatgattttgattttcctgcagtatttccagaatactatcactgca
agaaaattcgggcccatgtctattgtcattttaaaatttttttcagctca
aatttgggtttttgcctgaaaaatggctctaaGCAGGGATTTTatctcca
taatggcggacatagacgcatcccagacccaaatgattttgatttccctg
gagtatctccagaatactatcactgcataaaaaatttcagtcagcattta
aactcagtttgtagaagcttgccttaaaaaatgctatttttggataaata
tgattttttttttgctaaaaagcgatttttgaagacgtcattatgaattt
ttgaaaaaagtgaataacttgaaattcattttgcttaaagactttattaa
aGACTTCcttctctgaaaatttcagacatgtgatttaatcagtttaaagt
ttatgaacttgcaaaattggccttaaaaagcattttgctacccaaaattg
gcttaaaacggctcgtttagggctccaatgggcacaattttcaacccaat
atgattatttttttgtttcttcgtaaagtttagtacagcaaatgaaaaaa
ataagatttgcaatagttttgacatatttacaggcttgaaaaggccagaa
aatgccattttttccaatttttgcccgtagtgcgaatcagtacccccagg
ggggttcggccaattttggacttctgaccttaaaaattgcgcagaatgcc
tcacaataggttaaattttcataaaaaaaacactacatcttgaattttct
gactttgacatttcACGCCCCACCCTAGTAATGGAACacaatggagcgtt
tgacatcaCTCATGCGGCAAGTTACATACTTGTTATTTACTAATCCCATC
GGGCAATAGGCAGTTAGGTGGTAGGCGTTCTCTTATTCTCCAAtcagcgt
ccggtcattttgaatgaaaacaaaaaagttaaaagggcgcgctatcaaat
gaaaattatgttatgacagaaagtatgattgataaacttggtggagctat
caaaacaaatttgttgtcaaagagatttaacagtaagtgacaATACAGGC
TAGattatcaacagtcccatgtttcgaccaatcgtcccaagttagagcag
ttgacagtatcaCGTcacaaaaaaacgtttaaacaTGGTTACAAAAGAAC
ATTTGTATCCAGGTGATGGACACTTTGGTCAAATAAAATACTTACAGTCT
TTGAAGATGATGGTTCAGCCATTGATGAAATCAAATTTGTCATATTTTAG
CTAAATTAGAAAGCATCACTGGTCGAAATATCTATAAACTACCATGAGTC
GGCTGATTTTTTAAAAGTATGTGTGTGCGCAGTTTGCGGAAGTGCACTTG
AAAGTTCCGGAGTTCCGGTGAAGACCAATCGCCAAAAATTGTGCTCCGGA
ACACCGAAAGTGCTCCGGACATTTCCAGAGCGCTGAGTGAGAGGGTCCTG
ACCTGATATAGAAAAGTAAAAAGAGTGATATTTTTAATCAGCTTACCCAG
AGCAGAAGGTGTCAGCTATTATAACATTTAAAAtaccagatagttgctat
gatGGAATTAGATAAGGCATGTCTGTATTGCACAAAGTTATGGTACCTTG
GGTTGCTTCTGCCATCAATCAGCTGGCATTTTGCTTTCCCAACAGTTTTT
TTTCCGAAATCGCTTTTGAAACATCCTTTTTTCAGTGTAGCTGAACCTTT
GATGTTCCAAGATATTCATTTTAACCTgcttttttagcaattttgcCTCA
CTATACCGTAAGCTGCTGGTCTTAATTTCGActtccctcatctaattccg
gCACCCTTCTTTTAAGAGCTGGGAATAAAAGTaaaggccaggcccaattg
atagtttggttcGAGTCCTCCGACTGActctaaatatttaaaaaaaagtg
tttcactttgagttggaaaaatcaattttttttacttcctAAATTTCACT
TGATAACTTAAACTATCTCTGCGGTTCTTTTTTAACTCTATTCAttctag
gcttttaggggcagTTTAAAACTAGAAGGGCTTttactgtaccacccctt
aacttttgatctagtttttggatgaaatttggcacacatgACAGTTAGTC
ATACTAGCGAAGATTAATGCTGGGAAAGCGCTTTATCAATTACTGCCTTT
ATTAAAAATTGCCGGtttattattctttttaattggatGATATTGTTGCA
TTCCTTAGTTTTATAAGTATCACCAAATTAAGATATATTACAggtttttt
gtttatctaattaAATAGTGTGTCGCCTTTTagatttttacaaatttcca
ttttatcatttttttcaaagttgagcTTGTATTAAACTAATGTGAACGCC
ATTTTCGTATTTTCTTTGGTCTCCTGCTTTTATTTCAACCTCCTGATACA
TCTGGTgtaatttttgctgacgtcagcaaaaagtgttttcCTTAATTTTC
CCAAGATGGCTGAAACAGAATTTTTGGcccagaaattttttgaaaaggca
TTTATATGAGATGACGAGTAAAAATAGCCAAAGGCTTTTCCCAAAAAGGG
GATGAAACAACTGGCTGTCAAGTATTATTTGATTCGTTAATATTTTGCAA
AGGCCATAAGTTGCCCGAGTCCAGcagtataattttaaattaaaattttt
aaactctAGGGTCCAAAGGTCAAGATCTAAAAAATTTGTCATGCTTTGAA
GCTCTTTATCAATAAgccactattgtaccatttccattttgatgttttaa
attcatcaaaattctgggaagaaatttcactttttcaacttgctctgtca
aaaataactacAAAAAACTTATAATCCTCCGGTTttgcaaattcaatatt
attatttttttgatttaggAAAAAACAGGGTTAGTCttgcccgtagaaca
ataaatcaTGTTGGTCTTGGATcgtgttcaaaaataaaggcctgttttgt
gacattttcaaagttggctgacaattatgttaataaaatgagtatttttg
gtgGCTAACCGTTTATTTTTTNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNGATCATCATATAAAATTTCAAc
gttatatttgaaatatttttcaagttattcaagaaatactatatttttgA
GTTCACTAAATGTCTGAGTTCactaaatgtcacactatttttgaacatGA
TCCTTGCCTAAGCGTCTAGTTTATTCAATcgttggacctacctggaggtc
ctatcaATTAACTGGTGATTATTTGTTCGTTTATTTTGGATCAtagaatt
ttttagatttctggCACAGTGATGCAAGATGGTCCAAAATGGGATGGAGC
TCAATTTATTGTTCGATTTCCTGGAAATAAGTTCATTAATTTAGCAATTC
TGAATTTTCGTATAAATGTAAGGGTAAATAAATTCCTAAAAATTGGCATG
GATTTTTAGCTATAAGAATCACTTATTTCAATGTTCTTTAACTTAATTGC
TCTTCATACGTATGAGATTGAACGTTTTTAAGTTGTATATCCATATGTGG
TGTTTTGCTTGAAATTTGGAGTTTTTACAAAGAAGAAGTTAAAAGCCTGG
TTAAGCCAAACCGTTGATTTTATTATAACAAAAGCTGGAATGGAAAACAG
TTTTTACcgctttgacagctgaaaaatTGTTGAATTCAGATAAAATTTTG
TTCACTACTTTCTTGggtaaatatctttttttaagttgtgtatttcattt
tttgtaaattctcatttctttgcctctttttataagaaaatgtcaGTTAA
AAAGCTGTTTGAGCATTGAGGGCCTGCCTGAAGGGgtgaaaaattgttca
aatttaTGATAGAATATATATACCTACCATTTCCTGCCATTCTCAAAATC
TTATATATCTTCTTTCTTGCAAACGTTGTAACCTACAATATGTTGGAGAA
ACTACAAAACAATTAAATATCCGAATGAACATNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNGATGAAGGAGCTCCGAACTGT
CTTCTCCTACGGTCTTAATGAGAGAGCTAGGGGACATGATCAAAATCTTC
CAGTTGGAAAACTATTTCCTAAAATCACCAGATTTATCTCTCGAATGGCA
CACAGTCGTAATAATAGAAATAACCATCAACTACTTTCTAGCCACAcaga
ctttttcaattttcttgacAATCATTTTCAGAATGACATCATTGATTCTT
GCTATGATATCCGAGTTGCACTTAACAGGCTAAAGAAATcaactttgaag
aaaattaCTTCCGAAATTGTCTCACGTGGTCCTTTGGTTTCTCTTGACTC
TTTCTCTGAGCAACACTATCTTTACATTTTGGATATCATCGAAACTCTTA
TCTATATTCCACTACCTAGTAAAGCAAAGAAAGTAGCACCAAAACATATT
TGCAATGTATTTTTTGACAACAAAGCCATAGAACTTATTCATCTTCCTTC
TATTTTAAACCAACCTGACATTTTAGAACTTCTTCCTGAACCTTTGACGA
CCAAAGAAAATAGACCAGTTGTCACTTATTCTCTACATAAAActatacaa
aataaaattctcaATTATCAAGACACTGTAAATTCTATTCTTATCGATGA
TGAGGTCTCATTTGCACTTGACTCTGATCGTTGTGAATGTGTTAATTCAG
AATTTTGTGATCCTTTCCACCAACACATTATAACTGGTGATTTGAGaatt
gaaaattctaaattacgtaaacttttaacaaaaggcCCCAACTACCGTGA
ACCAAAACGTGTAAATTTTAAAAGAGCTTTAGAAAATATCATNCCTTGAT
TTGAACTCCATTTTAGAAAATAGCGAAAACTTGTGTAAAACATTTGGATT
ATCATTATCTGACAAAATTAAAACTCTCCCCATTATGTATTGGATTCCTA
AATTGCATAAGAATCCTATTGGTTGCCGCTTCATCATTGCTTCCAAATCA
TGTAGTACCAAACCGCTGTCTCGTGCTGTCTCCATGGTCTTCAAAGTCCT
ATACAAACANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNAATCT
TGTTTCTTTTCTAGTTTCAATAAGTTCTGGGTTGTACAAAATTCTTCGCC
TGTTATTGGACATCTTAACAGAATCAATGCcaagaaaaaagcaaaacgaA
TTCCTACATTCGATTTTGCAACACTGTACACAACCCTTCCACACGATCTT
CTcattgaaattttaaccaaaattatTAACTTTGCGTTTGATTTAGGTTG
TAGAAATAAACTTGGTTTTTCAAATACTTAAGCATTCACTGGACTACAAA
AGGGAAGGATGATCTGGGATGATAGGTTCTTTACTAGTACTTCACTGTCT
GAGTGTGTGTcctttctgataaaaaattgcttCTTCAAAGTTGGCAATTC
TATTCTTAAACAGTGCATTGGAATTCCAATGGGAATAGATCCTGCTCCTT
TTGGGGCAAATCTGTTTTTGTACCATTTTGAATCTCAGTATGTCAAAGGT
CTCATTTCTGCTAGTTCGCTTAGTGCCTATAACTTCCACTCTGTAGGTAG
ATTTATTGATGATTTGTGTGCCTTATTAAATGACAGAGATGAGTTTCATA
ATTGCTACAAACAGATTTACCCTAAAGAATTAGATCTCAAAGCTGAGCAC
CATGGAAACCATGCATCgtttttagatttagatatcaccgttgaaacaat
atttttagatataaactttttgataagaGAGATGCCTTTCCCTTCTTCAT
TGTAAAGATGCCACATGCTGACAGTAACATCCCATCGTGCATTTTTTATG
GATCcatcttttcagaaattttaaggATAGCACGTAGATCTGACTCCTAG
AGTCACTGAGCTTTTCATTGGAATGCAAAACCAGGGAGCTTCAAATGCTT
TCTTGAAGAAGcaagttgtcaaatgtttttccaGGTTTCCGGACTGTTTT
ATGAAATATGGGAAAACCATCgaagaatttttaaatattttcaaattgtg
aattgttttttgtgttttgtgttttttttttgttttttttttctctcatg
TCTAAGGAATCAGCATCAGAGTTATTCATTTCCTACTTTCCCTTTCCCCG
TGCGGTCGTCCCgacgccgaaccgggttcttGTCCAACTTTTGATtctgt
atttttcaatttttgtgtgaGAGGTTGTTTGCGACAAATGGTTTTTCACC
TGTAGTGTATGTGGGATTGTTATTACAATGCAATGTTCTCATTgcccttt
tgtactgtatttcgttgtagtgtctgtttgttgtttttctcgGTCAGTAT
CTTTTTCTGTTATGTTTCCtgaaggcgactgagtgtgggcccttaaacac
TTcgaaagtcactatgccagtcacaagtctgggacttcgggttttgtttt
gtgtttgtatgttttttgatgtatttggtgtgtttgcttttgtatttgtc
cccattttgtatgtattttgatgaaattgtgtaaatgattgtacggaagt
gtgtttatcaaaaaagttttttgcaattcattgtttctccactattactt
ttNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNtt
taactttttgctaaattaccctctgtttcggaatgattaaaaaattaaaa
ataccaaaaaaatcgtaaatatacacaattaacaaaaatattcttaacgt
tttttcgtttttatcagtttgagttatttatatattattAATACTATTcc
tttctaaaatgacagatattacatatcttcactattcttcacatatatat
atatagtatgaaaaaataaaatgttttctcctgtcagaactacaaacaac
aaagagtggccgaattctttttcctcttagagagacgatgttacaatGNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
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AGCCAACATCTCTAAACcacaaaatcacttgtggttcaaaCTGAGAGAAA
TAGTGGACAGAAGGGAAATTCCCTACGGAATTCTTTGTTGACTCCTTTTG
GAGCCAAGCTTTACCGTCTCAAGAGGGAGGAAAGCCTCAACACTGCATGA
GAGGAGATAAAgaatatatatgtgaagaaataagaatttctgtccaacta
tattcactcaggagatttgggtggcatgGGTGGCACCATTGGGTGGCATA
TATATATatctgataaaaaattgttttttcaatgcAGGTGATATTGTTAT
GTGTCAAGTGATCGGGATTCCCATGGGAATCGATCCGGCGCCATTTTGGG
CTAATCTTTTNtatgatagaatgatagaattttGTACACTTGTTTCTTGG
ATAAATATCTacaatcgtttttttttttttgcaaattcttgtttttttgc
ctctttttataagcacgtaATGTCAGTGTTAagctttcttttttgattta
caAATGGGATTTAAAATGGttaaacgatttttgaaaaatttgcttttgtt
ttcttttgtttcagttGTCATCTattaattttaaaatcagatacgtctat
aaaagtatcacttgttttataACTTGTTCTTTTTCCCTACAGAATGGTAA
ACGTTGTTACAAAGTGCAATGGAAGGAGAGTTGGGTTTTTGAGGAGCATT
TGGTCAATTGCAAACAGTTGCTGGCGAAATTCTGGAAAGAAAATTCCAAA
GGTGCAAAACAACAAACTAATGGAAATGTAATAatctatttttcaaattc
aatacaTTTCTTTGGTAATCAATCTATCTACTCTTATGTNCGTTTTCAaa
ttcaatacttttctttGGTAATCAATCTATCTACTATTATGTTAGGGACT
AAAACTTTATCTAGATTGTGTTGATTTGATGTAAATGTGCCCACATATTT
TTAATACTCTTGGACCCAATTTTTTTCTAACCTCAAAAACTGATCTAGTA
ATGCCACACTTGAGATAAATTGTTCGCTCATCAAATCTCTTTTGTCTCAA
AGTTGATTTATTTCTTACAAATTTAGTTTGCCACACCAATACCAGAAAAT
GGCTTGCCTCAAAGAGGTCCAACAATGAGTTCTAGAAAGCGTGATGCAAA
AGGAAAAGCAAAGGTGAACATTGAAGCGATGGCTAATCATTTGAAACAAG
GTTCCTCTTCAAAAGGCCCTTCAAGTGCCACTGAAATGGATGGTGTGTGG
GTGTTAGGTAGGTTTCTGGTTTATTAACTCATTCTCATATACCTAGCACT
CAATAGAAAATGTCCACTTGTTTTTATCTTATAAGATTAGAGTAGCTTCT
TTCACAATTATAATATGGCATTCCATTTTTTAAGCaacaaatcttttctt
ttctttggtaCTGTTAGGGCTATCAGCaatcttttgtaaaatttcCCCTA
GCCTCATAACAAAaaagtctttgttttttattttactgtaaAATTTTTTG
ACCTCGATTCTTTCCAAAGATTCAAATCATGGAAGTGATAATGAGAGTGA
CTTTGAAGCTGGAAGTGACTTTGAGGACGAAACTATCAAGTCATCTAAGA
AGAAGAATTTCACGCCCTATGAACTAAAGTGCGATGTCTGTGAGGCAGAA
TTCAGAAAAATAACTGAATTTCGCAAACATTACGCCAGCCAACATCCAGG
AGTCAATCCATTTGATTGTGAGGTTTGTCACCAGCGCTTTGGTAAGAAAG
AGAATCTTATGCGTCACATGATGAAACATACTGGGGAGTACCCATATTTC
TGTAATTTCTGTGGTAAAACCGCCGCTGACCCTTCTACCCTTCGCAAACA
CGTCGAAGCGAAACACAAAATTGAAGCTAAAAATGCTAACACTGGTATTA
AAAAATCAACACCAAATAAAAACAACGGGTCGCAAGCTTCCATGATCTGC
CATATTTGCAGTAAAGAGATTGAAACCATCAAAGCTTTCAAGGAACATTT
TCGTGCTGAGCACCCTGATATGAAGCCCTTCCAGTGTGATATTTGTGGGA
AAGGATTCGAAAAGAAAGAGAATTTGACCAGGCATATCCGTGTTCACACA
AATGATAGGATTTATTCTTGTGACCTGTGTGGTAAAAGTTATACTGATGG
TTCCTCCttgaaaaaacacgtcaaaatgCAAATCTGTATATTGAACAGGC
GTTCGGGTAAGAAAGTTACTAAAGCTGTAGCTGAAGTGATCAAAACGAGA
GGAGACGTTGCGAGTGCATCTCAGGTCGATCTATCTTTTGGTAAAAGTGA
AGATGAAGTTCAGGTTACTGATTCACAGGCTATTTCTGAGGGAAATTCTC
AGTCTAATGACATGGAAACAGAAGCACAATTTATCATTGAGGGTTCAACT
TCTCAACAACCAGGCGAAGAGCAGAATGAAGAATCGCAACAAAAAGAACG
AGTGAACTCCATAGAATCTCTCTTACAAACGATAAAACAAGTCAATGAAC
TTGGAACAGTTGTTCAATCTAATGGAGGCACAGATTCGGAACAAGTTGCT
GAAATGTCATCTCGTATTGTCTTCCCTACCATCAATATTCCCAAAGGTTT
TGAGAAAGGTGATGGAGGCTCCTGATTCCTTCACTGCATGAAAATTTCCA
TTAACCTTGTGCAAGTTCTACTCTCAAAAGTGATGGAATTACCTTTTAAA
AAGATCGTgtataatatttaaaaactttatttctAAGCTGcatttataat
tttaattttttatttcgttttgatgatatttttattcaatattaATCATT
ATTTGAGTGTATATACTTCAGTTTTAGCTTTCATTATATTAGTTAACCTA
TTATGCTACATTAAGGGAACGTtcggcgagaacttattttggcgaatttg
atTCCCTAAACTTAAGCCTAGTTTTTCTCGATAACACTCATTTTTATGCA
ATAATAGAACTAATTTCACTCTTCTAATGCCGAAATAAGATCgcgccaaa
attgaaaaatttgcccctcgcaatttaattttttaaggatttttgctGCT
CGCCGAAATTAGTTCTTTCTAGAATTAGTTCCCCTTAAgatatttttact
tttgtttatcGGAGCTTTGGAAATTTGTTAAAGCTTTTAACAGGCTTTAA
GGCGTGGTCTTTCTCagaat
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_004271XLOC_004271Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00007551-exon-sc0000078-1491911889:131343..131526TCONS_00007551-exon-sc0000078-1491911889:131343..131526Clytia hemisphaericaexon
TCONS_00007551-exon-sc0000078-1510915933:131343..131526TCONS_00007551-exon-sc0000078-1510915933:131343..131526Clytia hemisphaericaexon
TCONS_00007551-exon-sc0000078-1575043694:131343..131526TCONS_00007551-exon-sc0000078-1575043694:131343..131526Clytia hemisphaericaexon
TCONS_00007551-exon-sc0000078-1491911889:146435..146569TCONS_00007551-exon-sc0000078-1491911889:146435..146569Clytia hemisphaericaexon
TCONS_00007551-exon-sc0000078-1510915933:146435..146569TCONS_00007551-exon-sc0000078-1510915933:146435..146569Clytia hemisphaericaexon
TCONS_00007551-exon-sc0000078-1575043694:146435..146569TCONS_00007551-exon-sc0000078-1575043694:146435..146569Clytia hemisphaericaexon
TCONS_00007551-exon-sc0000078-1491911889:146869..147049TCONS_00007551-exon-sc0000078-1491911889:146869..147049Clytia hemisphaericaexon
TCONS_00007551-exon-sc0000078-1510915933:146869..147049TCONS_00007551-exon-sc0000078-1510915933:146869..147049Clytia hemisphaericaexon
TCONS_00007551-exon-sc0000078-1575043694:146869..147049TCONS_00007551-exon-sc0000078-1575043694:146869..147049Clytia hemisphaericaexon
TCONS_00007551-exon-sc0000078-1491911889:147312..148962TCONS_00007551-exon-sc0000078-1491911889:147312..148962Clytia hemisphaericaexon
TCONS_00007551-exon-sc0000078-1510915933:147312..148962TCONS_00007551-exon-sc0000078-1510915933:147312..148962Clytia hemisphaericaexon
TCONS_00007551-exon-sc0000078-1575043694:147312..148962TCONS_00007551-exon-sc0000078-1575043694:147312..148962Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000078supercontigsc0000078:131343..148962 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
Sort Descending | Sort Ascending | Only Non-Zero Values | Tile/Chart | Reset | Show/Hide Values

Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
2.92721	1.92312	1.72345	1.94553	4.8949	3.36892	2.70964	2.25487	1.08535	1.34438	1.18626	1.24768	1.16808	2.02176	0.864326	0.570802	1.05477	0.630646	0.845359	0.390739	1.81132	1.98787	5.63855	5.0042	1.88569	1.68293	0.642205	0.856723	4.67852	5.95834
Blast
[Close]
BLAST of TCONS_00007551 vs. Swiss-Prot (Human)
Match: MYNN (Myoneurin OS=Homo sapiens GN=MYNN PE=1 SV=1)

HSP 1 Score: 114.005 bits (284), Expect = 3.791e-26
Identity = 63/185 (34.05%), Postives = 87/185 (47.03%), Query Frame = 2 
Query:  596 PYELKCDVCEAEFRKITEFRKHYASQHPGVNPFDCEVCHQRFGKKENLMRHMMKHTGEYPYFCNFCGKTAADPSTLRKHVEAKHKIEAKNANTGIKKSTPNKNNGSQASMICHICSKEIETIKAFKEHFRAEHPDMKPFQCDICGKGFEKKENLTRHIRVHTNDRIYSCDLCGKSYTDGSSLKKH 1150
            PY  KC++C+  F +  +   H    H    P+ C+VC+ +F    NL  H  KH+GE PY C+ CG+  A  STL  HV                     + +  +   +C  C K      +   H R +H   KP+ C ICGK F     L +H R HT +R + C+LCG SYTD  +LKKH
Sbjct:  357 PY--KCELCDKGFAQKCQLVFHSRMHHGEEKPYKCDVCNLQFATSSNLKIHARKHSGEKPYVCDRCGQRFAQASTLTYHV---------------------RRHTGEKPYVCDTCGKAFAVSSSLITHSR-KHTGEKPYICGICGKSFISSGELNKHFRSHTGERPFICELCGNSYTDIKNLKKH 517

HSP 2 Score: 97.4413 bits (241), Expect = 6.695e-21
Identity = 60/191 (31.41%), Postives = 83/191 (43.46%), Query Frame = 2 
Query:  611 CDVCEAEFRKITEFRKHYASQHPGVNPFDCEVCHQRFGKKENLMRHMMKHTGEYPYFCNFCGKTAADPSTLRKHVEAKH------KIEAKN---ANTGIKKSTPNKNNGSQASMICHICSKEIETIKAFKEHFRAEHPDMKPFQCDICGKGFEKKENLTRHIRVHTNDRIYSCDLCGKSYTDGSSLKKHVK 1156
            C+ C   F + +  R+H    H GV P+ C +C + F +   L  H+  HTGE PY C  C K  A    L  H    H      K +  N   A +   K    K++G +   +C  C +          H R  H   KP+ CD CGK F    +L  H R HT ++ Y C +CGKS+     L KH +
Sbjct:  304 CNTCGKVFSEASSLRRH-MRIHKGVKPYVCHLCGKAFTQCNQLKTHVRTHTGEKPYKCELCDKGFAQKCQLVFHSRMHHGEEKPYKCDVCNLQFATSSNLKIHARKHSGEKP-YVCDRCGQRFAQASTLTYHVR-RHTGEKPYVCDTCGKAFAVSSSLITHSRKHTGEKPYICGICGKSFISSGELNKHFR 491
The following BLAST results are available for this feature:
BLAST of TCONS_00007551 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
MYNN3.791e-2634.05Myoneurin OS=Homo sapiens GN=MYNN PE=1 SV=1[more]
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