TCONS_00007548 (transcript) - C. hemisphaerica

Overview
NameTCONS_00007548
Unique NameTCONS_00007548
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length1388

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00007548 ID=TCONS_00007548|Name=TCONS_00007548|organism=Clytia hemisphaerica|type=transcript|length=1388bp
tagtttaaaaaatGTACACAGATAAAAACAACTATGAAAAAATTATGGAG
ATTCAAACTGAAATATTTGCTTCTAATTTCAACATTGATTACTTTAGTGT
TGCTGTATAACTGGGCAAAGGCTTCTAACAAGATAATCATCAATGTGGAC
CTTCGTCTGAATTTTATGGATCTTCCTGAAACAAGGGATAGACATTACAA
GATTTGGAATAGTCTATACTCAGTTTTTGACGGAAAAGAGGAATCTGGTT
CAACCAATATCAATGTTGGAATTGCTACACAAACATCTTTGAATCATCTC
CACAATTTAATCAAACTTGTTGATGCATGGAATGGCCCGATCTCAGTAGG
AGTGTTCACGCCCGGTCGTTTGTTACCTGATACTTTACAACACATCAAAC
AGCTGATTTTATGTCACCCAAAGATCTCACAATATGTAACATTTAACCTG
CTGCTTCCCTTGTCTCACCCTCCTGAGGACCCAATATTGATGTTTTCTAT
CACTGCAGTTGATAAATGTAATAATTTACATTTGGATGCAAGACCTTTGA
AACAAACTGaagataattatgataattcTAAGATTGTATATCCTGTTAAT
GCTTTGCGTAACATTGCTGTGAAGAACCTTCAAACATCTCATGTTTTCAT
GATTGATATTGACATGCTGCCAAGTAAAGGATTACGTCATTATTTGAAAA
CAGCAAACCTTTTACACCATGATGAAATGCAAGCGTTTGTGATTCCAGCT
TTTGAAGTGAAAACAGAATCGAACATTACAGAGAATAAAGAGCAACTTCT
TCAAAAATGGGAGAAAGAAGATGCAAGACCATTCTATTACACTGTCTGTT
GGAAATGCCAGAAGAATACGAACTATAAACGATGGAGATTATTAGATTCA
TCAACATTACTGTATAAAGTCGACTGGGTGGACCCTTGGGAACCATTTTA
TATTGCAAATCGAAAGTTTGTGCATTATGATGAGCGATTCCAACAGTATG
GTTTCAATCGCATCAGTCAATTATGTGACTTGCACTTGAAAGGAGCTGAC
TTCTTTGTATTGCGGGATGCGTTCCTCATTCACATCGGATTTAAAGATCG
GAATCggtttcacagtcgcaaagatGAAGAGAATGATCGTAACCGTATTC
TTTATCGCGctttcaagaaagaaaaatcagaaaCTGCCGTCAATGGTCGA
ATCTGCTGAGTGGTATGAATTAATCTCTgagatatttattttttcaaata
ttttctatgTGTGATGTACTAGAGATTTTATACTAAAATCTCCTTTACAC
GCTCTGATTCAACACTACTAAAATAATTTAGTTTGGTGCTTGGTATTGCT
Tccttaatttagaaaaataaaccaattaacttatactt
Run BLAST on NCBI

transcript from alignment at sc0000078:81432..91288+

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00007548 ID=TCONS_00007548|Name=TCONS_00007548|organism=Clytia hemisphaerica|type=transcript|length=9857bp|location=Sequence derived from alignment at sc0000078:81432..91288+ (Clytia hemisphaerica)
tagtttaaaaaatGTACACAGATAAAAACAACTATGAAAAAATTATGGAG
ATTCAAACTGAAATATTTGCTTCTAATTTCAACATTGATTACTTTAGTGT
TGCTGTATAACTGGGCAAAGGCTTCTAACAAGGTATACAATACTTAGTAT
TTTGTTTATCCCAAAAGTATTTGTAATATAGTTGGGCTAGAGCCTTTTGA
TGTATTTCTTTCTGTATGTCCCAAATATTTTAGGGCAGCTTTGAGAACGG
TCTCATAAATACCTGGGGtgttgtttttactttttataaactTTGATTTT
TAGGGTCTGGGGAGCTTGGGTTTTTTCACTATTACTATGTCTGCACCTTT
GAATAGAAAAATATTAAAGTTGGGGCTGTGTTGTGCACTTTCTACtattt
ttaaagagttttttgtttctgttttttgttttgttggcaaAACCGTCCAT
GTTATGCTTTCTTATCACAGAGGCCAATTTGCTTAAACAGAGGCTGTCAG
TTTATTTAACAATGTCTTAAATTTCATTTACACAAAAGTTGCTTATAATC
AATCAATTTGTATACCAAAGTCTgcctcaatataatttgcagcggagaca
aaaaggctgtaactcttgatagaataaTTCGAAATAGATAGCAGTTCtgt
gcttgttaaaaagataatttggTGTAGAATTATTatcataaaagaaaaaa
ttcaaaaaatggaaaaacgaaggatgaaaaacgaagaagaagaaaatcaa
cttcttgtagaataacGCTATGATCTTCATGTTTATATCAGaaattcttt
aatcttagaacatcataaaatgcgaaaaaaaattcaaaaaatattcattc
agtcaAATAATGCAGTTTAAAACTCTACCCTGGTTGACTTAAGAAAGGgc
tctttttgatattttttgattgtttttgaagtcaatcagtgataaaattt
atctttcgatggaataaatttctttgaaaatttttttcatattaatgatg
ttctaagataATTATAACACAATTATTAGTTGATTTTCTTCNGCTGTGTT
GTGCACTTTCTACtatttttaaagagttttttgtttctgttttttgtttt
gttggcaaAACCGTCCATGTTATGCTTTCTTATCACAGAGGCCAATTTGC
TTAAACAGAGGCTGTCAGTTTATTTAACAATGTCTTAAATTTCATTTACA
CAAAAGTTGCTTATAATCAATCAATTTGTATACCAAAGTCTgcctcaata
taatttgcagcggagacaaaaaggctgtaactcttgatagaataaTTCGA
AATAGATAGCAGTTCtgtgcttgttaaaaagataatttggTGTAGAATTA
TTatcataaaagaaaaaattcaaaaaatggaaaaacgaaggatgaaaaac
gaagaagaagaaaatcaacttcttgtagaataacGCTATGATCTTCATGT
TTATATCAGaaattctttaatcttagaacatcataaaatgcgaaaaaaaa
ttcaaaaaatattcattcagtcaAATAATGCAGTTTAAAACTCTACCCTG
GTTGACTTAAGAAAGGgctctttttgatattttttgattgtttttgaagt
caatcagtgataaaatttatctttcgatggaataaatttctttgaaaatt
tttttcatattaatgatgttctaagataATTATAACACAATTAttagttg
attttcttcttcttcatttttataatcttcactttccgatcttttttgag
atttttctttatgataatattccactcctttttatcttttcaacaagcac
aaaactgcTAACTAATTCGAATTTTGTCAAAAGTGATAGCCTTTTATGTC
TcttcaaattatattgagacagactttatttTGATGGGAATGAACttaca
aattgaaaatttacgtAGCTCTAGAAATAATTTATCTTTAGATAATCATC
AATGTGGACCTTCGTCTGAATTTTATGGATCTTCCTGAAACAAGGGATAG
ACATTACAAGATTTGGAATAGTCTATACTCAGTTTTTGACGGAAAAGAGG
AATCTGGTTCAACCAATATCAATGTTGGAATTGCTACACAAACATCTTTG
AATCATCTCCACAATTTAATCAAACTTGTTGATGCATGGAATGGCCCGAT
CTCAGTAGGTAttgtttatcaatttttttctctgtttCTCAAGTTATATA
AGAAGAGGGATCTTTGATTTGAAACTTTCTCTAATAATTGTTTTTCTATT
TCATTGCAGGAGTGTTCACGCCCGGTCGTTTGTTACCTGATACTTTACAA
CACATCAAACAGCTGATTTTATGTCACCCAAAGATCTCACAATATGTAAC
ATTTAACCTGCTGCTTCCCTTGTCTCACCCTCCTGAGGACCCAATATTGA
TGTTTTCTATCACTGCAGTTGATAAATGTAATAATTTACATTTGGATGCA
AGACCTTTGAAACAAACTGaagataattatgataattcTAAGgtagtttt
tgaaaacattcaaacattATTTATATAGAGAGAAagcatttgaaatattt
tccttgATAAATCTTACAAGTGATAACCATTAAGAATAATATTGtctata
tttaaaaattttcaaaaagtttcaaatactTTGTAGTCTACAAACTGCTG
GCTCGATTTTTTGTGAGAACGAATCAAACGAACTAAATTGCACAAATCAA
ATAAGTTCCTTTTTCCATGCTTGCAGATTGTATATCCTGTTAATGCTTTG
CGTAACATTGCTGTGAAGAACCTTCAAACATCTCATGTTTTCATGATTGA
TATTGACATGCTGCCAAGTAAAGGATTACGTCATTATTTGAAAACAGCAA
ACCTTTTACACCATGATGAAATGCAAGGTAAAGATGTACAAGTTGATTAA
GACCATGATACCATTAATCAAGTTGACCATTGGCCAAGTAGATGATGCCT
ACCCTGTCTTTGTCTATTTTGAAAGCCCGTAACATAACATAGCTCTGTTA
TTGAGTTACCCAATTGCAAAAATACACCCAATTATAATTTTGGATTGTAa
gtaattttcctggaaaatgaaatattctcaacttcagttgagctataatc
tgacaatgtctgtatgtatgtatgtctgtatgtctgtatgtccgtccgaa
aactttggggcagcctggagacttcaaaaaaggacggatttggctgaagt
ttggcacacttgttccttgggtgaatatctgggggtgttcttttcatttt
ttgaaaattttgatttttggggcctagggacgagtttttcgccaaaacga
ggctaaaactttggggcagcctggacacttcaaaaaaggtcgNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNcagtgcgttg
cgcacgttcgactatttattAGATTGAAACACAAATAGAAACCTGAGATT
CTGATTTATACTCACCAACATCAACATCAATATAAATGAGCTCTTTTTGG
ATCTGTAGTTCCAATTACAGTAGTAAGTTTCATCCAATGAAAGTATTCAT
ATCATTGAAACGCTCTGTGTTTATGAATTTTGACCTTGAATTCTAATTAC
GATAAAAGCTTACCTCAAATTTTTACTGTCTCCCTTTTTATTCAGCGTTT
GTGATTCCAGCTTTTGAAGTGAAAACAGAATCGAACATTACAGAGAATAA
AGAGCAACTTCTTCAAAAATGGGAGAAAGAAGATGCAAGACCATTCTATT
ACACTGTCTGTTGGAAATGCCAGAAGAATACGAACTATAAACGATGGAGA
TTGTAAGCTCAAATTTTACTTTCAcgcttttttagttttaacttCTCATT
ATAAAGTGATCAAATTTCCAAGTTTTGTTTCAGCTCAGCTTTCTGTCTGC
CAAGAGAAGCTGTTATTTTAGGTCGTTTAGACTTTTCTCGAGCAGGGAGG
AAAAATTGAAGCTTTAAGGCCGGACTCCACTTTCGcacgaaatgggcgac
agtttttttcttaaccttttttgcctaaaggaagttccacttttttcatc
cgttacgtcaatttctacCAATGGTGgtattgcttcatttttcaaccgac
caatgaccttacaaaaacgtcaaaaagttttcgctcatgtcgcgagAAAG
TGGAGACCGTCcctaaagggacataacagtacttgcgaaatttgtaaaca
atctgtatgcagcggatacaaaatcaaaacaaatgtcacatgtcaaaata
aaaaattaaaccaagaaatatggctaattttgattgttcaatttttttac
aagtttgttttgaacacgtgattttatttgttatctttaatgacacgttg
ttcgcgcaatgtttacattttattactTTCATGTCCCTTTAAGCTTTGCG
CCGCTTTTAGAATGGCAAATTGAACCGAGCGCTCTCTTCGTTTTCATATG
TCGTTTAATTCGAAATAGATTTACTTACAATCTGGCGTTTGATTTGATTT
AGACGGAGAATAAGTGGCTTCATATAGCATACAAGAGTTTCAACTCTAGC
CCTTTAAGGATTTGAACTCAATGATCCTGGTCCACTTTTTTTACCAGACA
CAGTGATGATGAAattaatacaattttttcaaacagCTGTCCCTTGAAAG
TCAGTCAAAATGCTTattaattttgccaaaatatttttatggatgaaagc
caaaattatgtTTTAGCCATCATGTCTCAACCAAGTCGGTGAGAATTTTA
CTCACGGCAGACATCCTCATCCTACTTTTTGACCCGCATTTTCAAAATCC
GATTAGACGGGGGTTttgttattatcagttaggtagggtcagggttgcta
gtaacggcttgtcactgtgccgggtgcatactcggcgccttgggccccgc
aggggtgctagtaacggcttgtccctgtgccgggtgcatactcggcgccc
tgGGGCCCGCCGGggtgctagtaacggcttgtccctgtgccgggtgcata
ctcggcgccttgggccccgcagggttgctagtaacggctcgaatttcagt
caggttaaaaaaggggtacttttacccatattgtaataacattacccccg
tcctttttgtcattctataagtatttacaaattttgtattctggtgtgcg
agtgtggctcaacggatagcgcgctgggtatCTGATCTGAGATTccttca
tttggtgggttcgaatcccggtcgggtcAATATTTggagaaaatttgaat
ttgaagtatcaaattcatagaaaagttagtagaaatcATAAAACAAGTCT
CAGAAGGTCAGAATatagaaaaggagatagagAGATAGGAATTGGAAAAA
CAGAAGGGGGTATGAGGATGATGAAGCCTACATGCAACCTATAATCTTTA
TAAGCCCTCAATTCGCTCTTTTTTTTAGATTAGATTCATCAACATTACTG
TATAAAGTCGACTGGGTGGACCCTTGGGAACCATTTTATATTGCAAATCG
AAAGTTTGTGCATTATGATGAGCGATTCCAACAGGTAAAATATTCCTCCA
CATACACCAATTTGTAAAATCTAAAGTTGCCTTTTGAAATACCTGCAATT
TTCNCATACACCAATTAGTAAAATCTATAAAGTTGCCTTTTGAAATACct
gcaattttcttttttcataccACTTTTCCTTCTTGtttgatcttttttaa
atcatttttttgtgTATTAAAACAGCTATGATACAACAAAACTATATTCT
CATGCAGCTTCTTCTCTCAAAGTTgattgattttctcaaaacaactGAAA
GCAATACAATAGAGAGATTATGTATCgaagatattctacggctacgattg
cggggctgcccatgcgggtcgtcaccaaaggcgacatgtcgttgtctact
ttgctctgtacgggaaaaacaccaaaacaccgtataagcaaagtcgacgt
aataccgtacgtcaaatatcgaacttgcttgcacccgccattacttgcct
tccTTGCCATTACCCTCGCCACTTTAACTGTAGCCGTAAAGAATTctaga
tacataatctcgctaacaGAAATTATCAACATTAATCAGCATATCAATAA
TTTGTATGACATATTGCGTAAGAAGTTCTTTCAAGCTGGCTTTGACTAGA
ACTTATAGACCAAAGAAATCACTAACACTGTTTAACGAAATAAAGGAAAT
CAAAGTACCGCATGCGTacagaaatttcttttttttccaagcaTTAATAT
ATTTAAGCTTACAGGTATATGTACCACAAAACCCTCACTAAATTTCTGat
ctaaataattattttttgggcTGCCTTTATCAAGAAACTTGTTTGATGGT
GCGAGGAGTCCCATGAAAACAGTTCTTCCTGATATTTTTCAATGTCATAT
GTtagattgtttttttgttattgctttttaaaattttatctttttttgaa
tacgtacctcaaaacccacatTTTTATCATTGATGATATCTTTAAGTCCA
CTGGGTCAATCAAGGTAAAATTTTGCACCTGTACATCTAGGTAAGTTTGT
TTTGGAAGTATTCATAAGTTGATAAGTTAGTCTCAATAGAATTACCTATT
ACACCACAGAACCCACAATAgatgtacctcaaaacccacatTTTTATCAT
TGATGATATCTTTAAGTCCACTGGGTCAATCAAGGTAAAATTTTGCACCT
GTACATCTAGGTAAGTTTGTTTTGGAAGTATTCATAAGTTGATAAGTTAG
TCTCAATAGAATTACCTATTACACCACAGAACCCACAATAgatgtacctc
aaaacccacaagGGAGTTTTGCAAATTATTTCTCCCCTCTTTAAATTTCT
ACCTAAAACTTTTTGacaattgattttgtatttcatataggtattttgta
tgtaaaaattaaGGATTACATGTTTTCCTAATTGTTGTGTTGAAATGATT
TTGGAAACTGCATAGACTGTTGTTATCACTCATGAAAGTTATTTATTGCA
AatgatagaaactttttcacattGTCTGGATagcaaatcaaaatgattta
gGCATTAATTGAAGCAAATGAAACTATTATTTACTATGAAAAGAAGACTT
TTGCAAAGCATATGAAGTTGTTGAAATTGCAGTGCAATCTCCACCATGAA
TATCGAAAAGCTAAAGAATCCCTTTTTAATCCGATGCAAAACATAAATCG
TGAGGCTTTTATGGGATAAAGATACATTAGTTTCCTGTGCCAAGCGGGTT
GGAATAACATCAAGTGGATTGAGCGTAAACTTCATGCAGTAAGATAAGCT
TGACAGAGCAGCAGCATGTATACAAGAAGAAGAAATCCCTCCATCAACAT
CTACATCAACTCCAGGCTCATCATGTCTCCTTCTGATAAAAGAAAAGGTT
CTCGTGATTATTGTAAGGCTAAATTTGGCCAGGCTCAGTCCCTGATAAGG
GAAATGGTAGAAAGAAGCATCCAACTGGAGGAaattcctggccttctgac
aaTAAAAAGGGTTAAGCCACACGAAGAAAAGAAAGCAACCACAACTACAA
GTTTGACTCAGGTACACGGCTTGACGAGGGCTAAAGAtgtagcaaccaag
gtcaaagAAATCAGGGATTAGAAACTGAAGAAggaaactgaaaaagaaga
agcaaAGAAGAGAGAGTAGATCAGAGAAACATTCATCAAATGCAAAACTC
AATGTACCTGTTTGCAACAAAAATCTTTGGCTTTAGGATTAAAGCAGTGC
CCAGTATAAATTGCACTATTGCATTATCGTTCAGTTTGCAGCAAAGCAAG
CTGTAAAGTTAATGGAATCAAACCACTGATGATATTACCAGCCAAACAAC
ATTCAATCTCTAAACGATTGTTTGAGGAGGATTCGTCATCAGGAAGGGGA
GGAATTTGAATCTGAAGAAAGCGAAATGTCCGAAGATAAAACTGATGATG
AAGACGTGATATCCAAAAACTCAAGAATTGCTGGAAAGGCCTGGCATAGC
CAACAAAAGAGACTGAAGTCACTGGTAGATGGTATGCTGCCATCTACACc
accaagaaaacaaaaaggttgtACAGTATATTGGTCGTTTGTTGAAGAGA
TGCTTAAAAGATGAAGATGGCGCTGTTAACTCACTTCAGTTGCACTGTCT
AAAGCCTAAAGTTGGGAGTGGCACTGTTTTTGAAGACACCCCAGACCATC
TTCCAGATATAAGCATTTTCCCAGTTCATGACATCATAGCTGGGCCATTA
AAGGTCATTCCCATTCgaggaaaaaattgaacatCCCAGATCATGATTCa
attgaaaatatgtttaaCAAAGTATCAGGACTAAACCGTCTAGCTTTAGT
AAATATGATGTAATATATCCATACTTTTTGTTAAGCTTTTNGttttaaat
aataaagaaacTATTATACCAACATAATCTTAAAAAGTTATgctaataaa
aacatttcagaTTTTTCTAGAACtcctgaaatgaaattgttggtTTTGAG
GTACCTGTGGGTTTTGTGGTACATATACCTGTAAGCTGAAAAGTAGCAAT
AGTTAAAGTTGTTTTTGATACAAATCTATGCAACTGGTGGGCTGTAAATt
aacaaactttgaaaaactttgtatGTCGATGTAATTTCAATGTACAATAC
TCTGTTATTTTCTAGTATGGTTTCAATCGCATCAGTCAATTATGTGACTT
GCACTTGAAAGGAGCTGACTTCTTTGTATTGCGGGATGCGTTCCTCATTC
ACATCGGATTTAAAGATCGGAATCggtttcacagtcgcaaagatGAAGAG
AATGATCGTAACCGTATTCTTTATCGCGctttcaagaaagaaaaatcaga
aaCTGCCGTCAATGGTCGAATCTGCTGAGTGGTATGAATTAATCTCTgag
atatttattttttcaaatattttctatgTGTGATGTACTAGAGATTTTAT
ACTAAAATCTCCTTTACACGCTCTGATTCAACACTACTAAAATAATTTAG
TTTGGTGCTTGGTATTGCTTccttaatttagaaaaataaaccaattaact
tatactt
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_004269XLOC_004269Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00007548-exon-sc0000078-1491911889:81432..81563TCONS_00007548-exon-sc0000078-1491911889:81432..81563Clytia hemisphaericaexon
TCONS_00007548-exon-sc0000078-1510915933:81432..81563TCONS_00007548-exon-sc0000078-1510915933:81432..81563Clytia hemisphaericaexon
TCONS_00007548-exon-sc0000078-1575043694:81432..81563TCONS_00007548-exon-sc0000078-1575043694:81432..81563Clytia hemisphaericaexon
TCONS_00007548-exon-sc0000078-1491911889:83373..83589TCONS_00007548-exon-sc0000078-1491911889:83373..83589Clytia hemisphaericaexon
TCONS_00007548-exon-sc0000078-1510915933:83373..83589TCONS_00007548-exon-sc0000078-1510915933:83373..83589Clytia hemisphaericaexon
TCONS_00007548-exon-sc0000078-1575043694:83373..83589TCONS_00007548-exon-sc0000078-1575043694:83373..83589Clytia hemisphaericaexon
TCONS_00007548-exon-sc0000078-1491911889:83691..83923TCONS_00007548-exon-sc0000078-1491911889:83691..83923Clytia hemisphaericaexon
TCONS_00007548-exon-sc0000078-1510915933:83691..83923TCONS_00007548-exon-sc0000078-1510915933:83691..83923Clytia hemisphaericaexon
TCONS_00007548-exon-sc0000078-1575043694:83691..83923TCONS_00007548-exon-sc0000078-1575043694:83691..83923Clytia hemisphaericaexon
TCONS_00007548-exon-sc0000078-1491911889:84158..84308TCONS_00007548-exon-sc0000078-1491911889:84158..84308Clytia hemisphaericaexon
TCONS_00007548-exon-sc0000078-1510915933:84158..84308TCONS_00007548-exon-sc0000078-1510915933:84158..84308Clytia hemisphaericaexon
TCONS_00007548-exon-sc0000078-1575043694:84158..84308TCONS_00007548-exon-sc0000078-1575043694:84158..84308Clytia hemisphaericaexon
TCONS_00007548-exon-sc0000078-1491911889:85877..86033TCONS_00007548-exon-sc0000078-1491911889:85877..86033Clytia hemisphaericaexon
TCONS_00007548-exon-sc0000078-1510915933:85877..86033TCONS_00007548-exon-sc0000078-1510915933:85877..86033Clytia hemisphaericaexon
TCONS_00007548-exon-sc0000078-1575043694:85877..86033TCONS_00007548-exon-sc0000078-1575043694:85877..86033Clytia hemisphaericaexon
TCONS_00007548-exon-sc0000078-1491911889:87660..87765TCONS_00007548-exon-sc0000078-1491911889:87660..87765Clytia hemisphaericaexon
TCONS_00007548-exon-sc0000078-1510915933:87660..87765TCONS_00007548-exon-sc0000078-1510915933:87660..87765Clytia hemisphaericaexon
TCONS_00007548-exon-sc0000078-1575043694:87660..87765TCONS_00007548-exon-sc0000078-1575043694:87660..87765Clytia hemisphaericaexon
TCONS_00007548-exon-sc0000078-1491911889:90897..91288TCONS_00007548-exon-sc0000078-1491911889:90897..91288Clytia hemisphaericaexon
TCONS_00007548-exon-sc0000078-1510915933:90897..91288TCONS_00007548-exon-sc0000078-1510915933:90897..91288Clytia hemisphaericaexon
TCONS_00007548-exon-sc0000078-1575043694:90897..91288TCONS_00007548-exon-sc0000078-1575043694:90897..91288Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000078supercontigsc0000078:81432..91288 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
Sort Descending | Sort Ascending | Only Non-Zero Values | Tile/Chart | Reset | Show/Hide Values

Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
8.17752	8.52876	6.30171	7.11341	3.07024	1.77294	1.19764	1.12275	0.31288	0.600648	1.39645e-07	0.333147	0.380244	0.16345	0.706289	0.393458	0.823489	0.320266	0.244895	0	0.694437	0.965465	4.31765	3.41608	0.129231	0.151896	0.874623	0.394709	2.63524	2.75639
Blast
[Close]
BLAST of TCONS_00007548 vs. Swiss-Prot (Human)
Match: B4GA1 (Beta-1,4-glucuronyltransferase 1 OS=Homo sapiens GN=B4GAT1 PE=1 SV=1)

HSP 1 Score: 216.853 bits (551), Expect = 1.577e-64
Identity = 124/330 (37.58%), Postives = 181/330 (54.85%), Query Frame = 1 
Query:  217 YSVFDGKEESGSTNINVGIATQTSLNHLHNLIKLVDAWNGPISVGVFTPGRLLPDTLQHIKQLILCH-PKISQYVTFNLLLPLSHPPE--DPILMFSITAVDKCNNLHLDARPLKQTEDNYD-NSKIVYPVNALRNIAVKNLQTSHVFMIDIDMLPS----KGLRHYLKTANLLHHDEMQAFVIPAFEVKTESNITENKEQLLQKWEKEDARPFYYTVCWKCQKNTNYKRWRLLDSSTLL---YKVDWVDPWEPFYIANRKFVHYDERFQQYGFNRISQLCDLHLKGADFFVLRDAFLIHIGFKDRNRFHSRKDEENDRNRILYRAFKKE 1173
            Y V+ G  ++     +V +AT  S+++L +L  L++ W GP+SV VF   +        +   +  H P +   V  +L+ P  +     DP        +  C  +      + Q   NY   + + YP N LRN+A +    ++  +ID+DM+PS    +GLR  L  +N        A V+PAFE++    +  NK +L+Q ++  + RPFYY +C  CQ  TNY RW  L   +LL   Y V W DPWEPFY+A  K   +DERF+QYGFNRISQ C+LH+ G DF VL + FL+H GFK+  +FH +K+ EN  N+ILYR FK+E
Sbjct:   79 YRVYRGLLKTTMDPNDVILATHASVDNLLHLSGLLERWEGPLSVSVFAATKEEAQLATVLAYALSSHCPDMRARVAMHLVCPSRYEAAVPDPREPGEFALLRSCQEVFDKLARVAQPGINYALGTNVSYPNNLLRNLAREG--ANYALVIDVDMVPSEGLWRGLREMLDQSNQWGGT---ALVVPAFEIRRARRMPMNKNELVQLYQVGEVRPFYYGLCTPCQAPTNYSRWVNLPEESLLRPAYVVPWQDPWEPFYVAGGKVPTFDERFRQYGFNRISQACELHVAGFDFEVLNEGFLVHKGFKEALKFHPQKEAENQHNKILYRQFKQE 403
The following BLAST results are available for this feature:
BLAST of TCONS_00007548 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
B4GA11.577e-6437.58Beta-1,4-glucuronyltransferase 1 OS=Homo sapiens G... [more]
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