|
Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00007542 ID=TCONS_00007542|Name=TCONS_00007542|organism=Clytia hemisphaerica|type=transcript|length=1349bp AAAGCAGGTTggtcaaaaaaattgtcaaagCAACATCATCAAAAGTGTAT AATTCCAAATCGACCAAGCAAAGAACGCAGAAGTTCAGGATTTTTGCAAA GATTCAGAAAAGcatGTGAGAGGTTCGACGAACGAAGGCAGATAAAAGGT GTGCGAAGCTCTGGAATTTtacgcagaaaaaaaaaacagcatcGGGAAAG AGATCGTATTGAGACGCGGAACGAAGACAGAAGATGGCTCTTGATTTCGG CGCCGGTTGCCTAGGAGGGGCTGCCGGTGTGGTAGTAGGACAACCTTTTG ACACAGTAAAAgTTCGTTTACAAGTACCTAAAGCTTCGTACCGTGgcgtg tttcattgtttcaccACCATGGTCAAAGAAGAAAGCATATTCAGTTTATA CAAGGGAATGACACCCCCACTACTCGGAGTGGCTTTTCAAAATGCTATTT TATTTGGATTGCAAGGATATTTCCGACGTTTCGTTGATGACAGTGTGTCC GGTGAAATGATCGCCGGAGCACTAACGGGAGCGTCGCAAGCTATTGTTAC AGCGCCTATCGAACATGCTAAAATTAAACTACAAATTCAAGGCACAGGAT GTCCCACACAGAACACACGGAGATATAAAGGACCTATTCAAACGATTTTA CAAATCAGACGTGAGAGTGGTACTAAAAGTTGTTTTCGTGGACTTCTTGG TGTTGTGTTGAGAGATATGCCAGGAACGGCTATTTACTTcggatcttttt cttttttgaaccaatttttcatccccgAAGGTGGCGATATAAATTCTTTA CGGCCCGCCACGTTACTTTTTACAGGAGGACTTGCAGGCATGCTTTCATG GGCGGCTTTTTATCCGATAGATGTGATCAAAACACGTATACAAGCGGAAG GATTGCAACCGCACGGGCGGTATGCTTCATATACGGACTGCGCTGTTGTC AGTTTTAAAGAGGAAGGGTATACATGGATGACAAGAGGTTTTGGTGCAAC CATGTTACGAGCTTTCCCTGTAAATGCGGCTATTTTCGCTACCGTAACTT TGATCTATCGATATATGAGATCACAATCGAGTGATGAATATGATGATTGA TTGgtgatttgtgtttttttctatgttttttttttggctttcaatgtatc aaattattttgttatatttCTGGTTAGACTAAGGCTTAGTGCGATTGttg gtattttttttactttttttttctctgataaaaacgaaatttATTACATA CTTCATTACGGCATTTTTTGATACCTTTTGTAACTTTTATACATTATCAT TAATTTTATATccgatttatttttttgcaatacAATGATACAATTTTCC Run BLAST on NCBI transcript from alignment at sc0000078:31671..40149+ Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00007542 ID=TCONS_00007542|Name=TCONS_00007542|organism=Clytia hemisphaerica|type=transcript|length=8479bp|location=Sequence derived from alignment at sc0000078:31671..40149+ (Clytia hemisphaerica) AAAGCAGGTTggtcaaaaaaattgtcaaaggTAATGTCTGTTAAAAAGAT
ACTTGCTTGGGTTTATGCATTATGGTGCAAAAGATTGACTTAGTGCGCTT
GTTAGGGTTTTTGGAAGTCTCGTAATTAGTTGATTATTGTGCATTTTCTT
TCTCATAGTGTATATATGCTGTAGAAATGAAATCATATGATTGATTAGTA
CTAAGTTGAACACTTATTAGTTCTCAGGATATTAAAATTCCATTTAAGAG
TATAGCGCTGTTAATACGCTGAACTATATTTGTCATATTTCACATTCATA
ACTACTTCTTATTTTTAGTACTAAGAAGATTATCATAAGTTTTTCGTCAT
TGTTAAACTTGTACTTAAGTTGTAGATTTCTCGTTCAAAGTTATTTATAT
TAGGTTGACGTACTTTCTGTCCCCTGTACAATTTCGATCTCCTTTACCTT
ATTTTAGCAACATCATCAAAAGTGTATAATTCCAAATCGACCAAGCAAAG
AACGCAGAAGTTCAGGATTTTTGCAAAGATTCAGAAAAGGTAATTCCATA
AATTTCTACTTTCTCTTTGAAAATTGTGCAGTTGGATTTATATTAATGGG
TCAATGTCCTTTCATACATTATGTTTTTGCGTTGAAAGCTCAATGAAtat
ttgacattattttttttagcttagGGCCTGGGTCATCAAGGGATAGAATA
TGCTTTAAAAGGTGAAACTCATAAGACGAGATTTCGTCTCCAGGTTCCTT
CTAATCTtgtaacagatcatccattctgcgcatacCACGCTCTTCTCTAA
TGGGATGTGACGAATATGAAGATCTGCATTCAAAACTGCGTTGTCTTTta
cttgaaattgaaagtgaaagcGATTTGTTTCTGACTTATATGTTTATGAA
TGACGTTTGTTTTGGTGTGATTGTATTACTTTAGCAAGACCACGCTTAAA
aggctcatttaatattcatcccaaatctggacgaaaaagatcaaagcggt
GTGCCAACCTGGGTAGATTTACTTATGGCCCATGAGCCAtggcctttaga
gtgaatacgtgTTAGCGCGGAGTTATCAGAATCTGCTCGTAGATTCGATA
CCTTCTGTCAAACTTTATCGGCCATTTCACTCTATCTTTCTTATGCCTTG
AGATGGATTCTCAAAACCGCGTTGAGGTAGCTATTTAATATTTAGCATAA
ATTGTACATCCTCTAACATTTTATCTTGAGATCTAGAAACTCTTAATTGT
GGAATCATATTAACCCTTCTATCTTctctacatttttttttaaataaagc
atGTGAGAGGTTCGACGAACGAAGGCAGATAAAAGGTGTGCGAAGCTCTG
GAATTTtacgcagaaaaaaaaaacagcatcGGGAAAGGTATTTAATTGTT
GCTTTACTTCTTTTGattcttttgaaattatattacgTATATGGCATACT
AATTATCGATTTATAGCCTTCGAGAACTCCATTACTTTGTCTCTTCTAgt
gatttatttttcataagaaactGTAATAATCCTCAGTGATTTTTTACTGT
AAGATTTTACCAGGAATATTATTGTTGAAAGAATCGTTTGTTTTGGAGAC
CTAGccagtttcaaaaataaatatttgtaACCTTCTCTCAACTTGGTTAA
GCGTGTGATTTAGATTTTCTTacaacaaaaaatgttcttGTGAAAAGCGT
TGTGAATTAGCGAACCTTCACTCCATTGTCAGTTGTCACTCAAAAGAAAA
CCTATTAAATGTCGTGGTCAGATTTACTAAGAAATTTCTTTACGAATGAA
TAAATGGCTTAGCCTTGTGAGTGAAGCCGTCTATTGGTTCTGATAATTAA
TTTCTCTTGATTTGAAATGCAGTTATTAAAAATGTGCAaaggaaagaaat
atttttttgtccaCGAGAAATTTGGTTATAGAGCACAGGTTGTGGTTTTT
CGTTGTCACACGCGTCTTGAGCTTTCAGTTGATTTTGTTCTTTTTGCCTC
CTTGTCGCTTTTTGATTGGTAGTTCTGAAgggaaaatgaagattgaagaT
TTATGTGTCAATGATTATCTTTACCTCGATGTCAGATGAAAACTGGTAAG
GTTTCTTTGTTGTTAGGTCGCGGCCCCTAACAAAAACGTTGGTTTTCAAA
AAGTTGGTCACgtacattttgaatttttttactttatttttgaaacttta
gcaaTCCGCTGGCCATGGTCTATATTGACTGCTGATCTCTCTTTGTGTTC
GAAACGCCCCTGTCTCGCATTCACGTTAAATACCTATTTACTTAACCAAT
GGGGAAGTAGTCGCCTCTGTATACATTTTATTTTCCCTCCGGTCGCTACC
CAACCGGAGCTATTCTACTGTTTTGGAGTTTGAATTATAGGCCTGTGCAA
AAACTATGCAGCATTTCTCAATAAAGATAAATGTATTGGTTAGAGAATAC
CCACTGCTCAGGCACTTCGTTCTTTTTTCGATTGTAGCAAGCCTTTTTCA
CCAAGAAACGAAGGAATTTTATTTGACCCATTGGATgcagtttttctttc
tttctcactttGTCAATCCGTTACACTTGTTAAGAATGTGATAGAGATCT
GTAGGGTCATTCAAAAATTACATAATTCTGCCTATCTTATCTCAAGCTTG
TTCCTCCTTTTTCTACTTTCTGATAAAATCTTTGTCTGATGTTTAACCCG
ATATCATTGAAAAGTTTTTCCGGGTTTTAGAATGAGATTTCCGGTGCAAT
TAGACAGTAGTTCGGGACGTTCGATAACGGGTCGACAACTCACTCAATTA
GAGTCCTATGAAAGGCTAATAGCATCTAAATGCTTTGAAATCAAGTTAAT
GAAAATACCTCATGCTATCCATTATTTTTGTTAAACATTGAATTGATATC
TATTCAAACTGACTAGAATTTTGATCCTTAATTGCATCGCGTGAAACTGT
TTTATGACACCCTACTTACTATACAGTAAGTTAATCTTGGCAACTCCTCT
TAATGGAGCTGTTACCCTTAGTAACATATTATACCTATTAGAAAtagctt
ttttgagattttgcaaCCTGTTTGTTGTCGTTACCAATCCAATACCTTGA
ACAGGTTGTTTTAATCcctaatctttgtgtaaacgaGTCCTCAAAATCGT
TTTCGAAATCTTTGCTTCTCCCATCATAAAGAATTTAATTAGTCTGGATT
TTGGTGTTGACaacctttttaaaattgtttatcaTTTGATGTCGATACAT
TTACTAGCTACACTCGCCTCTTACACACCTTTTTCATTAAGAGTTGGAGA
AGCTTTTGTAAGTTCGTTGCTAAttggtttattttgctttggtGTAACTG
AAACAGGCCGTTTAACATGATCATTTAGTAGTTTATTTTGGATAATTGAT
GCATTTATAACTGAATGCGGATGTTCCAAAAATGTTATTGCTGGCTTTTG
ATTGATATTGGAAATCTTTGTTGCTGGGCGTGTCACTTTCATTTTGTTCG
GTTGTTTTCTGTTTTAGAGGGTAGAGAAGTGTCATATTTGCGCAAGAAAT
CAGAGAGAGATTTTCAAAGGGTTTTCAAAGATCTTTCAGAGATACCACGT
GGAGTAGCCCTGTCTACTGTGGACCCTCGTATATAAAAGACAGATCTTCA
ACCAAAAAGGCTTAATCTTAGAAGATCGGAATGCAAGACTGCTCTGCTCT
CGCTCTCCTTCAACTAAATTGAAATCATTTTGTACTTAGTATACTATTTC
TAAACTTGTTCGTTGAAAAAAGCATAAGAATTTCAGTGATGGGTCTGTGA
AAGTATACAATCAACTCTACGTATGTAACAACAGTAAAAGTCACGTTTTA
GACTTCAACTGAATGTGGCGTTAAAAAATCAATGTGGAGCATGAAAGCGA
GGTTTTCGGAAAAAGATAATAAAGAAATAAATTATTTACAGCTCCTTCTC
ATGCCAATAGAATCATCcgaaaaatatttcgttgaGGGGGAACCTAGTTT
TACTAGTGAAAATTCAAAAGGCTTTTAATTGATTTTCCATCAGTTTCTTT
TTTATGACGAACGCATACATACCGCAGTCTTATTctgttttttatcaata
ttccAAGATTTTACTGTCGATTTACATAACAGAGTATTGAACTTTATATC
TACtcatgaaaaataatatttcgGGTAAAGATTCATCTTAAATCTGATTA
AAATGGTAAACTCTAAGAATTAAAAACCTTCTTAAAGAAAAGAATGGTAT
TTTTCTATATCTTTGTATGTTACGTAACAGGACCTCTGTATGGTCAGCAT
AGTCATTTGTTAAAACAAGGGGCAGCGGAACAATActagggacaagctgg
agtttttacaagctcttatttgatttagttggtcgttaaccagtaataaa
acaattttgttactttttctaaagaacgcgtcatctctatcacttcaaat
gaacaattagtgaagtatcttgtaaaaactccagctcatccccaaTACTA
GAGGAACCAACTTCGCCAAGGGAAATTTGTCATTCATTTTGTTTAAAAGT
AGGGTGACAATCACTAGCTAAAGCATTGTGTGGTAGCTTTTTAGAAGTTT
TTTGAAACACTCCTCTAAGGGAATAGTTTTATTCTCGAACGGAAGCAAGG
GCAACTTAACATCAAACGATCATCTTATCGTCAGTCTTAGTGAAAAATCA
TAGGCCATTTAGCAGTTGCAAAGCGTAacgggtaatcaggaccactgcgc
gctaatgacaACTTACTATTAGTccgaaattttgaagatttttgagcaac
cggtcctgattacccatgattcatttcgactgtgaaatggcctttTTGAA
ATCGTACAGGTaaaccattttgaattttacttAAAGACAGTATTTCGCAT
GTTGTTCAGGCATTACTTATTGCCGAAACTTTTCCTATAGAAACTGTCAA
GCTAgagagcttttttgaaggggtgTGAATGGGGTGCGACGTCACGTGAc
gttgatgaattttttttggaagttTGACGCTGTAAACAATTAGACTTTGT
TGAAGATTCTGTAAGAATATCGTCCTTCAATGCATGAGGAATCAAGGTTC
AGTCAATGTCAAAGGAGAAGATAAATGTTTTCTGAAAGAAAGATTTGTtg
aattcttaatttttaaCAATGAAGTGAAAGATTTTCATGTTATCGGTATG
AATGAATATTTGACTGGAACATTTCTCAACAAATAAGTTGAATGTCATAA
CGTTTACCATGTGACTAACCATTGTTGGCGACAAGAAAATACTCATTCAA
TCTTTCATCAATACTGATTGAGGAGGCACCATAGTGAAGGATCTTCACCT
CATCAATAATTGAAGAAAACTTTCTAATTTTACCTTCCAATTCTCAACTA
CCCTTTCAcccttttcatgaaaatttaatgaagaaatactttcatccttt
ctttgtgtgtttggaatatattcatttatttttgaatttttcatactTTT
CCTTTCTCTCAAATTTGGACAACTTCAGGATTACTTTACATCGCGATGAG
GAGAGACAGATACGCCTTGCTGATATACTTTCATTCTTTTGTGATAGACC
AGTTGAGGCTTGAAGTTTTCGAACAAatcatcttctttttgactacAGTA
TAAGCCTTTTTGGGATCAAAAACACACATTTTTCCGTGAGGCTTCCAGAG
CCCTATTTAGTACGCTGAGCGTGACACAAATCATAAAGAGtgtgcttttt
tgaaaatctttgttttttcagcGTGACGAGATGAATTGCATGATGGGAGG
GGTTCTCCCCTTGTTCTATCCATCTTTAATTGGTTATAATTGATTTTAAT
CGACCAATTCGACGCCAAGTTGAATCCCTAATTGGATTGCTTcttttttc
cttgaaaacagCTTGTTTACATCGTTGCACTACCGGGAGTAAACTTGATT
ATAAATCATTAAATATCAGAAATCCTCAGCAAATCCTACGACAGTATCAA
TTATCTCAGGACATTTTTtacttaaattttcattttttctttttatgttg
ATAAAATCTAGAGATCGTATTGAGACGCGGAACGAAGACAGAAGATGGCT
CTTGATTTCGGCGCCGGTTGCCTAGGAGGTaagtcttttttcaaatttct
tttatctAAGGGCATTTTGCCAATACCAATACTAAGAATCTCTTAATATC
AAGGTGAAACGATAAACGATGACGGCGATAAACGTTGCCCTCACAAGCAT
ATCTGCCCTCACAAGCATATCTGGGCCCAGATATTGCAAAGGTTTATGCT
AAGCATTACCTTGAGCCTACTTTTTCCGTTTTTTGATGGAATTTTACTGA
TTTTAAGAATTTCCCAGAACTTTGGCTTATGATATAAGCATTTTCAGCCT
TGTCAATCTCTCGATCTAAGCATCTCCgagaaagttttttaaaatgtaCC
TTAATTTAATCTAATTTAAATTAACCTATTAATAGGTAAGCCTGAAAAAT
TTCGCTCGAGCCCTGATGATATTCCAGCAACTGTTGAGTAAAATTTATAT
TGCCAAAAAATAGTCGATATTGAGAGAAAGATCGTAAAACCAATGGCTAA
CGAGAAAGCGCGACAAAGGAACTTTAAACTGAatattttcgttttttctt
TACAGGGGCTGCCGGTGTGGTAGTAGGACAACCTTTTGACACAGTAAAAG
TAAGTTTCGTTAAGGTGTTAGTcaaatttttagctttttaatgACATTTG
CACGTATTGCCCAGGCCCAAGAGAGAAACAGTCAGGGAATTGCACCTAAA
TGCTCCCCTTCCCATAGGCACATGCtgattgggctgttccataaaatttc
cgagccttttcaagtgaaaacaaatttcttggaaaagtgtagataccccc
ctggaaaatggcaaaatttgcaaaagaacccttggaaaaaattcttttct
tgtatctcaaagtgagggtggacgaattAAAATCAGTTgttcaccccctg
gaaattcaagaataactttttaccccctagaaaaatgaaaaaagtgtgTA
AGAGAACGGTTTTACAACATTTAAACATTACGGATGAGGAAAGAAAGATA
CGATTATTTAATATTGACTTtctatattttgtttttcttcaggTTCGTTT
ACAAGTACCTAAAGCTTCGTACCGTGgcgtgtttcattgtttcaccACCA
TGGTCAAAGAAGAAAGCGTATGTCTCCTTACATCTTCATCATTCATAGAG
ATCTTCATAGTTTTCTTTGCAATTCTGTCTATCATTAAGCAAGCTCGAAC
ATTAATTTGCAGATGCTGGAACACAGGCCTACCATACTCAACCCTGTTAT
TGACACTCTTCTGAGAAACTTTGTTTCATTTCCTTCACTCTAGTTTTCAG
GCTTAATTACTCTCTTCTTATCGCACTTGAAAAATTCGGAAACACCAATT
CTTTGACTGATTTGTTATATGTGTAATAAtaatttagtaattttttttct
tttcttcacttttcagATATTCAGTTTATACAAGGGAATGACACCCCCAC
TACTCGGAGTGGCTTTTCAAAATGCTATTTTATTTGGATTGCAAGGATAT
TTCCGACGTTTCGTTGATGACAGTGTGTCCGGTGAAATGATCGCCGGAGC
ACTAACGGGAGCGTCGCAAGCTATTGTTACAGCGCCTATCGAACATGCTA
AAATTAAACTACAAATTCAAGGCACAGGATGTCCCACACAGAACACACGG
AGATATAAAGGACCTATTCAAACGATTTTACAAATCAGACGTGAGAGTGG
TACTAAAAGTTGTTTTCGTGGACTTCTTGGTGTTGTGTTGAGAGATATGC
CAGGAACGGCTATTTACTTcggatctttttcttttttgaaccaatttttc
atccccgAAGGTGGCGATATAAATTCTTTACGGCCCGCCACGTTACTTTT
TACAGGAGGACTTGCAGGCATGCTTTCATGGGCGGCTTTTTATCCGATAG
ATGTGATCAAAACACGTATACAAGCGGAAGGATTGCAACCGCACGGGCGG
TATGCTTCATATACGGACTGCGCTGTTGTCAGTTTTAAAGAGGAAGGGTA
TACATGGATGACAAGAGGTTTTGGTGCAACCATGTTACGAGCTTTCCCTG
TAAATGCGGCTATTTTCGCTACCGTAACTTTGATCTATCGATATATGAGA
TCACAATCGAGTGATGAATATGATGATTGATTGgtgatttgtgttttttt
ctatgttttttttttggctttcaatgtatcaaattattttgttatatttC
TGGTTAGACTAAGGCTTAGTGCGATTGttggtattttttttacttttttt
ttctctgataaaaacgaaatttATTACATACTTCATTACGGCATTTTTTG
ATACCTTTTGTAACTTTTATACATTATCATTAATTTTATATccgatttat
ttttttgcaatacAATGATACAATTTTCC
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
Feature Name | Unique Name | Species | Type |
TCONS_00007542-exon-sc0000078-1491911889:31671..31700 | TCONS_00007542-exon-sc0000078-1491911889:31671..31700 | Clytia hemisphaerica | exon |
TCONS_00007542-exon-sc0000078-1510915933:31671..31700 | TCONS_00007542-exon-sc0000078-1510915933:31671..31700 | Clytia hemisphaerica | exon |
TCONS_00007542-exon-sc0000078-1575043694:31671..31700 | TCONS_00007542-exon-sc0000078-1575043694:31671..31700 | Clytia hemisphaerica | exon |
TCONS_00007542-exon-sc0000078-1491911889:32128..32209 | TCONS_00007542-exon-sc0000078-1491911889:32128..32209 | Clytia hemisphaerica | exon |
TCONS_00007542-exon-sc0000078-1510915933:32128..32209 | TCONS_00007542-exon-sc0000078-1510915933:32128..32209 | Clytia hemisphaerica | exon |
TCONS_00007542-exon-sc0000078-1575043694:32128..32209 | TCONS_00007542-exon-sc0000078-1575043694:32128..32209 | Clytia hemisphaerica | exon |
TCONS_00007542-exon-sc0000078-1491911889:32970..33057 | TCONS_00007542-exon-sc0000078-1491911889:32970..33057 | Clytia hemisphaerica | exon |
TCONS_00007542-exon-sc0000078-1510915933:32970..33057 | TCONS_00007542-exon-sc0000078-1510915933:32970..33057 | Clytia hemisphaerica | exon |
TCONS_00007542-exon-sc0000078-1575043694:32970..33057 | TCONS_00007542-exon-sc0000078-1575043694:32970..33057 | Clytia hemisphaerica | exon |
TCONS_00007542-exon-sc0000078-1491911889:37732..37798 | TCONS_00007542-exon-sc0000078-1491911889:37732..37798 | Clytia hemisphaerica | exon |
TCONS_00007542-exon-sc0000078-1510915933:37732..37798 | TCONS_00007542-exon-sc0000078-1510915933:37732..37798 | Clytia hemisphaerica | exon |
TCONS_00007542-exon-sc0000078-1575043694:37732..37798 | TCONS_00007542-exon-sc0000078-1575043694:37732..37798 | Clytia hemisphaerica | exon |
TCONS_00007542-exon-sc0000078-1491911889:38326..38369 | TCONS_00007542-exon-sc0000078-1491911889:38326..38369 | Clytia hemisphaerica | exon |
TCONS_00007542-exon-sc0000078-1510915933:38326..38369 | TCONS_00007542-exon-sc0000078-1510915933:38326..38369 | Clytia hemisphaerica | exon |
TCONS_00007542-exon-sc0000078-1575043694:38326..38369 | TCONS_00007542-exon-sc0000078-1575043694:38326..38369 | Clytia hemisphaerica | exon |
TCONS_00007542-exon-sc0000078-1491911889:38813..38887 | TCONS_00007542-exon-sc0000078-1491911889:38813..38887 | Clytia hemisphaerica | exon |
TCONS_00007542-exon-sc0000078-1510915933:38813..38887 | TCONS_00007542-exon-sc0000078-1510915933:38813..38887 | Clytia hemisphaerica | exon |
TCONS_00007542-exon-sc0000078-1575043694:38813..38887 | TCONS_00007542-exon-sc0000078-1575043694:38813..38887 | Clytia hemisphaerica | exon |
TCONS_00007542-exon-sc0000078-1491911889:39187..40149 | TCONS_00007542-exon-sc0000078-1491911889:39187..40149 | Clytia hemisphaerica | exon |
TCONS_00007542-exon-sc0000078-1510915933:39187..40149 | TCONS_00007542-exon-sc0000078-1510915933:39187..40149 | Clytia hemisphaerica | exon |
TCONS_00007542-exon-sc0000078-1575043694:39187..40149 | TCONS_00007542-exon-sc0000078-1575043694:39187..40149 | Clytia hemisphaerica | exon |
Position
The following features are aligned
Aligned Feature | Feature Type | Alignment Location |
sc0000078 | supercontig | sc0000078:31671..40149 + |
Blast
BLAST of TCONS_00007542 vs. Swiss-Prot (Human)
Match: MCATL (Mitochondrial basic amino acids transporter OS=Homo sapiens GN=SLC25A29 PE=1 SV=2) HSP 1 Score: 226.483 bits (576), Expect = 1.345e-69 Identity = 130/287 (45.30%), Postives = 179/287 (62.37%), Query Frame = 3
Query: 234 MALDFXXXXXXXXXXXXXXQPFDTVKVRLQV---PKASYRGVFHCFTTMVKEESIFSLYKGMTPPLLGVAFQNAILFGLQGY-FRRFVDDSVSGEMIAGALTGASQAIVTAPIEHAKIKLQIQGTGCPTQNTRRYKGPIQTILQIRRESGTKSCFRGLLGVVLRDMPGTAIYFGSFSFLNQFFIPEGGDINSLRPATLLFTGGLAGMLSWAAFYPIDVIKTRIQAEGLQPHGRYASYTDCAVVSFKEEGYTWMTRGFGATMLRAFPVNAAIFATVTLIYRYMRSQSS 1082
MALDF AGC GG AGV+VG PFDTVKVRLQV K YRG HCF +++K+ES+ LYKG+ PL+G+ F NA++FG+QG R DS + +AGA GA Q ++ P+E AK +LQ+Q G R YKG + + QI G + RG++ +LR+ P +YF ++ L + E GD L LL GG +G++SW + YP+DV+K+R+QA+GL+ RY DC S++ EG+ TRG +T+LRAFPVNAA FATVT++ Y R + +
Sbjct: 1 MALDFLAGCAGGVAGVLVGHPFDTVKVRLQVQSVEKPQYRGTLHCFKSIIKQESVLGLYKGLGSPLMGLTFINALVFGVQGNTLRALGHDSPLNQFLAGAAAGAIQCVICCPMELAKTRLQLQDAG----PARTYKGSLDCLAQIYGHEGLRGVNRGMVSTLLRETPSFGVYFLTYDALTRALGCEPGD--RLLVPKLLLAGGTSGIVSWLSTYPVDVVKSRLQADGLRGAPRYRGILDCVHQSYRAEGWRVFTRGLASTLLRAFPVNAATFATVTVVLTYARGEEA 281
The following BLAST results are available for this feature:
|