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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00007497 ID=TCONS_00007497|Name=TCONS_00007497|organism=Clytia hemisphaerica|type=transcript|length=3820bp
gtttctttttcacagataaaaaaactaaaaaataacacaaaaaagttgaa
aaaggaTCTCAACCATTGGAATCAATGAGCTATGATGAACAAAAatgttc
attttcattttgcaCGCCTTTATCATCGTGACGTCACAAACCAAATGGAC
TTGGACGACTTCAATTACTGTAAacgatgatgacgtcatcaaaactttaA
ATCGAgacatcagcaaaaataaaaatgacgccGCCATTAGGAACAACATC
AACGTaagagattttgaaattttacgcACTGACCAGTTTATACACGTTAA
AAATGGAGTTACGACACGGCAAGTTACGTTCGACTTTCACAACCGACAAT
TCGTACTAGAATTACGACAAAACAGCGACATACTGACCGATGACTTTGAT
ATTAGACACCACGCAACGATTGACAGACGGGAGTTGTATACGGGTTACGT
TAAGGGTGAATTTACGTCAGATGTGCACGTCGCTATTGAcaacaatgacg
tcataaccGGTGTAGTTTACACAGACGCAATAACGTTACGTATCGAGCCA
TTACGTGGTTACGCTACGAATGCACGTAAGAGGGAAATGATCATTTACGC
GCACTCGAACGACGTAACGcgtttttcaggcaaaaagatAGGAGATGACG
ATTTTGCTCTGATGCTTGGGAAAGGTTTAAAAGAAGAAGGGAGGCTTAAA
AATGCCCGTAAAACAGAACAAATTACTCGTAAAGCTGAAGAAAATGCTCG
TAAAACAGGAGAAAATACTTACGAATTCCTTCAAGATATTTCTCAAAAAC
CTTTATTTCGTACACGACGCTCAAATACTAATAAATGTGACTTTCCCAAA
AAGACGTTATGCCCGATGTATGTAGTCGCCGACCATCGGTTTTTTAAATA
CGTCGGTGGAAGCGAGAAAAAGAACACTATATATCACATGCTACAAGCAA
TCCGTTTCGCTGACAAAGTTTTTAAAGAGACTACTTGGAATGACGGGGTG
ACGTGTAACATAGGACTAACCGTCGGTGATTTTTACGTTTTGGAAAAGCC
AGGGAATTTCAGCTTCAATAAACCGGCCGACGACAACAAACCTGAAGCTT
ATCAAAACATTTTACAAGACTTTTCAAGAGAAAAAAGTTTGCTACCTGGC
TGGAAATCGTCATATTGTTTAGCTCATCTTTTTACGTACCGTGACTTCAA
AGATGACGTCGTTGGATACGCTTACATTGGTAATGAGGATACGTCACCGG
GACGTTACAACCACGGTAGTCATGCCAAATCGTACGGTATTTGTGGGCAA
CAGAATGTGGCGTTCAGTAGTTATTTTAACAGTGCACGTAACACTGGTTT
GTTGACGTTGGAAGCCAATCTCGTCACAACGCATGAAATAGCTCATAATT
TCGGCGCCCGTCACGACAAAAAGAAGGACCCGACTTGTTATCTAGGACGT
GAATCAGACACCGGCAATTTTCTAATGTTTGACTTGATGGTGACAGGACG
TAAACGAAACAACGCTAAATTATCGCCGTGTAGTATCGCGTCCATCTCGC
GTGTGATCAAGAGGAAAAGTGAGCGCTGTTTCATACAACAAAACGATACG
CTTTGCACGAACGGTGTTCTTGACCCGGGAGAGGAGTGTGACCCTGGGCT
ATTCGGAAACGACGACCCGTGTTGCGATAGAAACTGTAATCTTAAACCAG
GTGCACAATGCAGTGATCTTAATCATGTATGCTGTACAGAGTGTCAATTT
GCCAGTGGGAAACTATGTAAAGAAAGAAGTGACGCAGATTGTTTAGAAGC
GTCCTATTGTGATGGTACGTCTGCCGGGTGCGTAAACATCACCCGTGACC
CGATCACAGATAACACGACTTGTGATTACGGTAAAGGCAATTGTCAGAAA
GAAGGTTGTGTCTCTATTTGTAATCAGCGTGGGAAAGAAGAATGCAATTG
TGCTGATGCGGGTATAGATGCATGTAAAATCTGTTGTCGTGATAAGCAAA
CGGGGCTCTGTTCTCAGGTCTTGGATTCCGAACATGTATGGGATGGCGTT
CCATGCGAAGTGAATAATAAGATCGGTACGTGCAGAGCTGGAATATGTGT
GAAAGTCAAGCGTCGTGTGGATGACGAGTTTGATGCGCTActgaaagatt
tttcttttaataacctACGTTTATTCATGATGAAAAATATAGTGGGTACC
ATTTTGGTAATTTCCATTTTGTTTTGGGCACCTGTGGCGTGTGTGGTCCA
TTGGCTAGACAAGAAACAAGATGAAGAAGAGAAATTCAACTTGAACTGGA
CACTGCCGTCAAATTCAGAGCTAGTTTTGAGTAGGGGAGCACGAAAAAAG
AGACTGGGTTTATTGTTCAGAAGACAAGCAGCTTCTGCAAAGAGAGTGAA
AGGTGGCCAATTTCATATTTCCAGGTAGTGCAACATGTTTTTCTCTcatc
tggaaaatttttgaaatttagtctACCTGCTCGGTAGAAAGTTCGTTGGC
GAAAAATATTCGTCGGTCAAATTTTCGTCACTAGAAATTAACTTTATGTC
ACTTTTTATCGACAAATATTTTTTACCGACGATTTTTTTCCGGGGTAGCC
TCGGTTCTTTAGAGTATTTAAGGCTGGAAACACACAGGTAAAGTAATTGT
TTGATTTCTTTAGTTTTTATGGCAAACCCTTTTTCTTAGAACAATAGCCC
AAAATTTTGCGCTGAAGTattaaatttcaaacaaacaagTTTTTAATGTC
ATTTGGTGAAAAATAATAGTCGACAAAAATCAATCCTCGGTCAAAGGTTT
TCCTCGGCTAAAGAATTCGCTAGTCAaattaagggaacttattttggcgg
gaattaattttggcgaatttagcgaatttagacaaaattcgccaaaatta
gttcccaccaaaattaaatattttgctcactcgccaaattGATATTTTGC
CTACACAACTTCTTGCATTCAAGAAGTttcaaataaggcaaaatagaaca
gatctACGCTGTCAATCGCcgaaataagttctcgccaaaattaaaaattt
tcaggacTTTTGCCGCTTgtcaaaattaattcccgccaaaataagttccc
ttaaaggTAGTTACCAAGTGATTTTACGTCCTTTTTTGCCGACGAATATT
CTACCGATAATTAGTTTTTTAAGTTTACCGTAAAGAAATGATTTCGAtga
tcaaaacatttttaatgtGGTCTCTATCGAAAGGTACCTTAACTAGACGC
CCCAgatctaaaatattttcaattgggatgttatttcaaatttaattttt
tgatttcacgGTGACTGACAAGCTGAGTATTGTCTGCGTTTCGCTattca
ttgatttttttatttttttatttttttcaatttttgatgcaAATTATATT
TCGATATGTTTTTCTTCtacagaaatttttcatttttcaaacttttttaa
ctATTCTTAATAAACTATGCAATtacactttctttttttataacatttta
agTACAACTATTTTTATATCTACAAATTAGGGAATTAGATTTTCTAGATT
AGATTCAGCAGTATTCAATAGTGCTACCATTATTAGGGTACCCGGGTGAA
CTGtatcaaaatgattttttgtaaaCGTTATTGTATAAATATTTCGTACC
TTTACAAAAGTGttatttgtttcaaacttttttatgtaatttttatttac
gcattttattttagatattttaatatagctttttttacattttgaatATT
AGGGTTTTCATAATTCATCAGTAGACATACAATAGATCAATATTTGTGCT
ACTTTTTCCCTTAGTTATCT Run BLAST on NCBI protein sequence of TCONS_00007497-protein >TCONS_00007497-protein ID=TCONS_00007497-protein|Name=TCONS_00007497-protein|organism=Clytia hemisphaerica|type=polypeptide|length=777bp
MFIFILHAFIIVTSQTKWTWTTSITVNDDDVIKTLNRDISKNKNDAAIRN
NINVRDFEILRTDQFIHVKNGVTTRQVTFDFHNRQFVLELRQNSDILTDD
FDIRHHATIDRRELYTGYVKGEFTSDVHVAIDNNDVITGVVYTDAITLRI
EPLRGYATNARKREMIIYAHSNDVTRFSGKKIGDDDFALMLGKGLKEEGR
LKNARKTEQITRKAEENARKTGENTYEFLQDISQKPLFRTRRSNTNKCDF
PKKTLCPMYVVADHRFFKYVGGSEKKNTIYHMLQAIRFADKVFKETTWND
GVTCNIGLTVGDFYVLEKPGNFSFNKPADDNKPEAYQNILQDFSREKSLL
PGWKSSYCLAHLFTYRDFKDDVVGYAYIGNEDTSPGRYNHGSHAKSYGIC
GQQNVAFSSYFNSARNTGLLTLEANLVTTHEIAHNFGARHDKKKDPTCYL
GRESDTGNFLMFDLMVTGRKRNNAKLSPCSIASISRVIKRKSERCFIQQN
DTLCTNGVLDPGEECDPGLFGNDDPCCDRNCNLKPGAQCSDLNHVCCTEC
QFASGKLCKERSDADCLEASYCDGTSAGCVNITRDPITDNTTCDYGKGNC
QKEGCVSICNQRGKEECNCADAGIDACKICCRDKQTGLCSQVLDSEHVWD
GVPCEVNNKIGTCRAGICVKVKRRVDDEFDALLKDFSFNNLRLFMMKNIV
GTILVISILFWAPVACVVHWLDKKQDEEEKFNLNWTLPSNSELVLSRGAR
KKRLGLLFRRQAASAKRVKGGQFHISR Run BLAST on NCBI transcript from alignment at sc0000077:679426..683800- Legend: exonfive_prime_UTRCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00007497 ID=TCONS_00007497|Name=TCONS_00007497|organism=Clytia hemisphaerica|type=transcript|length=4375bp|location=Sequence derived from alignment at sc0000077:679426..683800- (Clytia hemisphaerica)
GTTTCTTTTTCACAGATAAAAAAACTAAAAAATAACACAAAAAAGTTGAA
AAAGGATCTCAACCATTGGAATCAATGAGCTATGATGAACAAAAATGTTC
ATTTTCATTTTGCACGCCTTTATCATCGTGACGTCACAAACCAAATGGAC
TTGGACGACTTCAATTACTGTAAACGATGATGACGTCATCAAAACTTTAA
ATCGAGACATCAGCAAAAATAAAAATGACGCCGCCATTAGGAACAACATC
AACGTAAGAGATTTTGAAATTTTACGCACTGACCAGTTTATACACGTTAA
AAATGGAGTTACGACACGGCAAGTTACGTTCGACTTTCACAACCGACAAT
TCGTACTAGAATTACGACAAAACAGCGACATACTGACCGATGACTTTGAT
ATTAGACACCACGCAACGATTGACAGACGGGAGTTGTATACGGGTTACGT
TAAGGGTGAATTTACGTCAGATGTGCACGTCGCTATTGACAACAATGACG
TCATAACCGGTGTAGTTTACACAGACGCAATAACGTTACGTATCGAGCCA
TTACGTGGTTACGCTACGAATGCACGTAAGAGGGAAATGATCATTTACGC
GCACTCGAACGACGTAACGCGTTTTTCAGGCAAAAAGATAGGAGATGACG
ATTTTGCTCTGATGCTTGGGAAAGGTTTAAAAGAAGAAGGGAGGCTTAAA
AATGCCCGTAAAACAGAACAAATTACTCGTAAAGCTGAAGAAAATGCTCG
TAAAACAGGAGAAAATACTTACGAATTCCTTCAAGATATTTCTCAAAAAC
CTTTATTTCGTACACGACGCTCAAATACTAATAAATGTGACTTTCCCAAA
AAGACGTTATGCCCGATGTATGTAGTCGCCGACCATCGGTTTTTTAAATA
CGTCGGTGGAAGCGAGAAAAAGAACACTATATATCACATGCTACAAGCAA
TCCGTTTCGCTGACAAAGTTTTTAAAGAGACTACTTGGAATGACGGGGTG
ACGTGTAACATAGGACTAACCGTCGGTGATTTTTACGTTTTGGAAAAGCC
AGGGAATTTCAGGTAACACATTTTTCTTCTTTAGAATATTTCTACTTTCC
AAAGGTGGCATATAGTTAATTTCCAGGGGTAAACCTGTTCAGAGGGTGGG
TACAACTTCTATTTGGAAGACTTCCATTTCAAACTTGCAGGCGTGTGCGA
CTTAGCTTTTACTAAAAGTATTTCTCTTTGCTACAGTACTACATCTCCAA
AAGCCATATTTTCACCTCCTACGTTTAGAGGGGTTTTTAAATTCTCAGAC
AACCCTGTAAGGGGGAGGGGTTCGAAAAGTCAATTATTAGGGGGTTTAGC
CTTTCGGGGGGGGGTTTATATAGGGGTTTTTGGTCAATGAAAACATTTAC
ATCTTGTTGTTTGTTTCTTGCGATTTGTTCTTTGAAAAGAAAAACAGTTT
CAGTTTAAATAGCATATTTGATATCATTCCTGTCAAAAATTTTATCCCAT
GGCAAATTTATTTATGAGGGGGTTTCGACTTTAGGGGGTTGATTATATAG
GGTGTTTGAACCACCCAGGAAGCACTTTGGTCATATTTCAAACGATTTCA
TTTCCTTGTCTCGGTAGCTTCAATAAACCGGCCGACGACAACAAACCTGA
AGCTTATCAAAACATTTTACAAGACTTTTCAAGAGAAAAAAGTTTGCTAC
CTGGCTGGAAATCGTCATATTGTTTAGCTCATCTTTTTACGTACCGTGAC
TTCAAAGATGACGTCGTTGGATACGCTTACATTGGTAATGAGGATACGTC
ACCGGGACGTTACAACCACGGTAGTCATGCCAAATCGTACGGTATTTGTG
GGCAACAGAATGTGGCGTTCAGTAGTTATTTTAACAGTGCACGTAACACT
GGTTTGTTGACGTTGGAAGCCAATCTCGTCACAACGCATGAAATAGCTCA
TAATTTCGGCGCCCGTCACGACAAAAAGAAGGACCCGACTTGTTATCTAG
GACGTGAATCAGACACCGGCAATTTTCTAATGTTTGACTTGATGGTGACA
GGACGTAAACGAAACAACGCTAAATTATCGCCGTGTAGTATCGCGTCCAT
CTCGCGTGTGATCAAGAGGAAAAGTGAGCGCTGTTTCATACAACAAAACG
ATACGCTTTGCACGAACGGTGTTCTTGACCCGGGAGAGGAGTGTGACCCT
GGGCTATTCGGAAACGACGACCCGTGTTGCGATAGAAACTGTAATCTTAA
ACCAGGTGCACAATGCAGTGATCTTAATCATGTATGCTGTACAGAGTGTC
AATTTGCCAGTGGGAAACTATGTAAAGAAAGAAGTGACGCAGATTGTTTA
GAAGCGTCCTATTGTGATGGTACGTCTGCCGGGTGCGTAAACATCACCCG
TGACCCGATCACAGATAACACGACTTGTGATTACGGTAAAGGCAATTGTC
AGAAAGAAGGTTGTGTCTCTATTTGTAATCAGCGTGGGAAAGAAGAATGC
AATTGTGCTGATGCGGGTATAGATGCATGTAAAATCTGTTGTCGTGATAA
GCAAACGGGGCTCTGTTCTCAGGTCTTGGATTCCGAACATGTATGGGATG
GCGTTCCATGCGAAGTGAATAATAAGATCGGTACGTGCAGAGCTGGAATA
TGTGTGAAAGTCAAGCGTCGTGTGGATGACGAGTTTGATGCGCTACTGAA
AGATTTTTCTTTTAATAACCTACGTTTATTCATGATGAAAAATATAGTGG
GTACCATTTTGGTAATTTCCATTTTGTTTTGGGCACCTGTGGCGTGTGTG
GTCCATTGGCTAGACAAGAAACAAGATGAAGAAGAGAAATTCAACTTGAA
CTGGACACTGCCGTCAAATTCAGAGCTAGTTTTGAGTAGGGGAGCACGAA
AAAAGAGACTGGGTTTATTGTTCAGAAGACAAGCAGCTTCTGCAAAGAGA
GTGAAAGGTGGCCAATTTCATATTTCCAGGTAGTGCAACATGTTTTTCTC
TCATCTGGAAAATTTTTGAAATTTAGTCTACCTGCTCGGTAGAAAGTTCG
TTGGCGAAAAATATTCGTCGGTCAAATTTTCGTCACTAGAAATTAACTTT
ATGTCACTTTTTATCGACAAATATTTTTTACCGACGATTTTTTTCCGGGG
TAGCCTCGGTTCTTTAGAGTATTTAAGGCTGGAAACACACAGGTAAAGTA
ATTGTTTGATTTCTTTAGTTTTTATGGCAAACCCTTTTTCTTAGAACAAT
AGCCCAAAATTTTGCGCTGAAGTATTAAATTTCAAACAAACAAGTTTTTA
ATGTCATTTGGTGAAAAATAATAGTCGACAAAAATCAATCCTCGGTCAAA
GGTTTTCCTCGGCTAAAGAATTCGCTAGTCAAATTAAGGGAACTTATTTT
GGCGGGAATTAATTTTGGCGAATTTAGCGAATTTAGACAAAATTCGCCAA
AATTAGTTCCCACCAAAATTAAATATTTTGCTCACTCGCCAAATTGATAT
TTTGCCTACACAACTTCTTGCATTCAAGAAGTTTCAAATAAGGCAAAATA
GAACAGATCTACGCTGTCAATCGCCGAAATAAGTTCTCGCCAAAATTAAA
AATTTTCAGGACTTTTGCCGCTTGTCAAAATTAATTCCCGCCAAAATAAG
TTCCCTTAAAGGTAGTTACCAAGTGATTTTACGTCCTTTTTTGCCGACGA
ATATTCTACCGATAATTAGTTTTTTAAGTTTACCGTAAAGAAATGATTTC
GATGATCAAAACATTTTTAATGTGGTCTCTATCGAAAGGTACCTTAACTA
GACGCCCCAGATCTAAAATATTTTCAATTGGGATGTTATTTCAAATTTAA
TTTTTTGATTTCACGGTGACTGACAAGCTGAGTATTGTCTGCGTTTCGCT
ATTCATTGATTTTTTTATTTTTTTATTTTTTTCAATTTTTGATGCAAATT
ATATTTCGATATGTTTTTCTTCTACAGAAATTTTTCATTTTTCAAACTTT
TTTAACTATTCTTAATAAACTATGCAATTACACTTTCTTTTTTTATAACA
TTTTAAGTACAACTATTTTTATATCTACAAATTAGGGAATTAGATTTTCT
AGATTAGATTCAGCAGTATTCAATAGTGCTACCATTATTAGGGTACCCGG
GTGAACTGTATCAAAATGATTTTTTGTAAACGTTATTGTATAAATATTTC
GTACCTTTACAAAAGTGTTATTTGTTTCAAACTTTTTTATGTAATTTTTA
TTTACGCATTTTATTTTAGATATTTTAATATAGCTTTTTTTACATTTTGA
ATATTAGGGTTTTCATAATTCATCAGTAGACATACAATAGATCAATATTT
GTGCTACTTTTTCCCTTAGTTATCT Coding sequence (CDS) from alignment at sc0000077:679426..683800- >TCONS_00007497 ID=TCONS_00007497|Name=TCONS_00007497|organism=Clytia hemisphaerica|type=CDS|length=4668bp|location=Sequence derived from alignment at sc0000077:679426..683800- (Clytia hemisphaerica)
CTTCAATAAACCGGCCGACGACAACAAACCTGAAGCTTATCAAAACATTT
TACAAGACTTTTCAAGAGAAAAAAGTTTGCTACCTGGCTGGAAATCGTCA
TATTGTTTAGCTCATCTTTTTACGTACCGTGACTTCAAAGATGACGTCGT
TGGATACGCTTACATTGGTAATGAGGATACGTCACCGGGACGTTACAACC
ACGGTAGTCATGCCAAATCGTACGGTATTTGTGGGCAACAGAATGTGGCG
TTCAGTAGTTATTTTAACAGTGCACGTAACACTGGTTTGTTGACGTTGGA
AGCCAATCTCGTCACAACGCATGAAATAGCTCATAATTTCGGCGCCCGTC
ACGACAAAAAGAAGGACCCGACTTGTTATCTAGGACGTGAATCAGACACC
GGCAATTTTCTAATGTTTGACTTGATGGTGACAGGACGTAAACGAAACAA
CGCTAAATTATCGCCGTGTAGTATCGCGTCCATCTCGCGTGTGATCAAGA
GGAAAAGTGAGCGCTGTTTCATACAACAAAACGATACGCTTTGCACGAAC
GGTGTTCTTGACCCGGGAGAGGAGTGTGACCCTGGGCTATTCGGAAACGA
CGACCCGTGTTGCGATAGAAACTGTAATCTTAAACCAGGTGCACAATGCA
GTGATCTTAATCATGTATGCTGTACAGAGTGTCAATTTGCCAGTGGGAAA
CTATGTAAAGAAAGAAGTGACGCAGATTGTTTAGAAGCGTCCTATTGTGA
TGGTACGTCTGCCGGGTGCGTAAACATCACCCGTGACCCGATCACAGATA
ACACGACTTGTGATTACGGTAAAGGCAATTGTCAGAAAGAAGGTTGTGTC
TCTATTTGTAATCAGCGTGGGAAAGAAGAATGCAATTGTGCTGATGCGGG
TATAGATGCATGTAAAATCTGTTGTCGTGATAAGCAAACGGGGCTCTGTT
CTCAGGTCTTGGATTCCGAACATGTATGGGATGGCGTTCCATGCGAAGTG
AATAATAAGATCGGTACGTGCAGAGCTGGAATATGTGTGAAAGTCAAGCG
TCGTGTGGATGACGAGTTTGATGCGCTACTGAAAGATTTTTCTTTTAATA
ACCTACGTTTATTCATGATGAAAAATATAGTGGGTACCATTTTGGTAATT
TCCATTTTGTTTTGGGCACCTGTGGCGTGTGTGGTCCATTGGCTAGACAA
GAAACAAGATGAAGAAGAGAAATTCAACTTGAACTGGACACTGCCGTCAA
ATTCAGAGCTAGTTTTGAGTAGGGGAGCACGAAAAAAGAGACTGGGTTTA
TTGTTCAGAAGACAAGCAGCTTCTGCAAAGAGAGTGAAAGGTGGCCAATT
TCATATTTCCAGGTAGATGTTCATTTTCATTTTGCACGCCTTTATCATCG
TGACGTCACAAACCAAATGGACTTGGACGACTTCAATTACTGTAAACGAT
GATGACGTCATCAAAACTTTAAATCGAGACATCAGCAAAAATAAAAATGA
CGCCGCCATTAGGAACAACATCAACGTAAGAGATTTTGAAATTTTACGCA
CTGACCAGTTTATACACGTTAAAAATGGAGTTACGACACGGCAAGTTACG
TTCGACTTTCACAACCGACAATTCGTACTAGAATTACGACAAAACAGCGA
CATACTGACCGATGACTTTGATATTAGACACCACGCAACGATTGACAGAC
GGGAGTTGTATACGGGTTACGTTAAGGGTGAATTTACGTCAGATGTGCAC
GTCGCTATTGACAACAATGACGTCATAACCGGTGTAGTTTACACAGACGC
AATAACGTTACGTATCGAGCCATTACGTGGTTACGCTACGAATGCACGTA
AGAGGGAAATGATCATTTACGCGCACTCGAACGACGTAACGCGTTTTTCA
GGCAAAAAGATAGGAGATGACGATTTTGCTCTGATGCTTGGGAAAGGTTT
AAAAGAAGAAGGGAGGCTTAAAAATGCCCGTAAAACAGAACAAATTACTC
GTAAAGCTGAAGAAAATGCTCGTAAAACAGGAGAAAATACTTACGAATTC
CTTCAAGATATTTCTCAAAAACCTTTATTTCGTACACGACGCTCAAATAC
TAATAAATGTGACTTTCCCAAAAAGACGTTATGCCCGATGTATGTAGTCG
CCGACCATCGGTTTTTTAAATACGTCGGTGGAAGCGAGAAAAAGAACACT
ATATATCACATGCTACAAGCAATCCGTTTCGCTGACAAAGTTTTTAAAGA
GACTACTTGGAATGACGGGGTGACGTGTAACATAGGACTAACCGTCGGTG
ATTTTTACGTTTTGGAAAAGCCAGGGAATTTCAGCTTCAATAAACCGGCC
GACGACAACAAACCTGAAGCTTATCAAAACATTTTACAAGACTTTTCAAG
AGAAAAAAGTTTGCTACCTGGCTGGAAATCGTCATATTGTTTAGCTCATC
TTTTTACGTACCGTGACTTCAAAGATGACGTCGTTGGATACGCTTACATT
GGTAATGAGGATACGTCACCGGGACGTTACAACCACGGTAGTCATGCCAA
ATCGTACGGTATTTGTGGGCAACAGAATGTGGCGTTCAGTAGTTATTTTA
ACAGTGCACGTAACACTGGTTTGTTGACGTTGGAAGCCAATCTCGTCACA
ACGCATGAAATAGCTCATAATTTCGGCGCCCGTCACGACAAAAAGAAGGA
CCCGACTTGTTATCTAGGACGTGAATCAGACACCGGCAATTTTCTAATGT
TTGACTTGATGGTGACAGGACGTAAACGAAACAACGCTAAATTATCGCCG
TGTAGTATCGCGTCCATCTCGCGTGTGATCAAGAGGAAAAGTGAGCGCTG
TTTCATACAACAAAACGATACGCTTTGCACGAACGGTGTTCTTGACCCGG
GAGAGGAGTGTGACCCTGGGCTATTCGGAAACGACGACCCGTGTTGCGAT
AGAAACTGTAATCTTAAACCAGGTGCACAATGCAGTGATCTTAATCATGT
ATGCTGTACAGAGTGTCAATTTGCCAGTGGGAAACTATGTAAAGAAAGAA
GTGACGCAGATTGTTTAGAAGCGTCCTATTGTGATGGTACGTCTGCCGGG
TGCGTAAACATCACCCGTGACCCGATCACAGATAACACGACTTGTGATTA
CGGTAAAGGCAATTGTCAGAAAGAAGGTTGTGTCTCTATTTGTAATCAGC
GTGGGAAAGAAGAATGCAATTGTGCTGATGCGGGTATAGATGCATGTAAA
ATCTGTTGTCGTGATAAGCAAACGGGGCTCTGTTCTCAGGTCTTGGATTC
CGAACATGTATGGGATGGCGTTCCATGCGAAGTGAATAATAAGATCGGTA
CGTGCAGAGCTGGAATATGTGTGAAAGTCAAGCGTCGTGTGGATGACGAG
TTTGATGCGCTACTGAAAGATTTTTCTTTTAATAACCTACGTTTATTCAT
GATGAAAAATATAGTGGGTACCATTTTGGTAATTTCCATTTTGTTTTGGG
CACCTGTGGCGTGTGTGGTCCATTGGCTAGACAAGAAACAAGATGAAGAA
GAGAAATTCAACTTGAACTGGACACTGCCGTCAAATTCAGAGCTAGTTTT
GAGTAGGGGAGCACGAAAAAAGAGACTGGGTTTATTGTTCAGAAGACAAG
CAGCTTCTGCAAAGAGAGTGAAAGGTGGCCAATTTCATATTTCCAGGTAG
ATGTTCATTTTCATTTTGCACGCCTTTATCATCGTGACGTCACAAACCAA
ATGGACTTGGACGACTTCAATTACTGTAAACGATGATGACGTCATCAAAA
CTTTAAATCGAGACATCAGCAAAAATAAAAATGACGCCGCCATTAGGAAC
AACATCAACGTAAGAGATTTTGAAATTTTACGCACTGACCAGTTTATACA
CGTTAAAAATGGAGTTACGACACGGCAAGTTACGTTCGACTTTCACAACC
GACAATTCGTACTAGAATTACGACAAAACAGCGACATACTGACCGATGAC
TTTGATATTAGACACCACGCAACGATTGACAGACGGGAGTTGTATACGGG
TTACGTTAAGGGTGAATTTACGTCAGATGTGCACGTCGCTATTGACAACA
ATGACGTCATAACCGGTGTAGTTTACACAGACGCAATAACGTTACGTATC
GAGCCATTACGTGGTTACGCTACGAATGCACGTAAGAGGGAAATGATCAT
TTACGCGCACTCGAACGACGTAACGCGTTTTTCAGGCAAAAAGATAGGAG
ATGACGATTTTGCTCTGATGCTTGGGAAAGGTTTAAAAGAAGAAGGGAGG
CTTAAAAATGCCCGTAAAACAGAACAAATTACTCGTAAAGCTGAAGAAAA
TGCTCGTAAAACAGGAGAAAATACTTACGAATTCCTTCAAGATATTTCTC
AAAAACCTTTATTTCGTACACGACGCTCAAATACTAATAAATGTGACTTT
CCCAAAAAGACGTTATGCCCGATGTATGTAGTCGCCGACCATCGGTTTTT
TAAATACGTCGGTGGAAGCGAGAAAAAGAACACTATATATCACATGCTAC
AAGCAATCCGTTTCGCTGACAAAGTTTTTAAAGAGACTACTTGGAATGAC
GGGGTGACGTGTAACATAGGACTAACCGTCGGTGATTTTTACGTTTTGGA
AAAGCCAGGGAATTTCAG
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this transcript:
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00007497-exon-sc0000077-1575043694:682739..683800 | TCONS_00007497-exon-sc0000077-1575043694:682739..683800 | Clytia hemisphaerica | exon |
| TCONS_00007497-exon-sc0000077-1575043694:679426..682183 | TCONS_00007497-exon-sc0000077-1575043694:679426..682183 | Clytia hemisphaerica | exon |
| TCONS_00007497-exon-sc0000077-1510915933:682739..683800 | TCONS_00007497-exon-sc0000077-1510915933:682739..683800 | Clytia hemisphaerica | exon |
| TCONS_00007497-exon-sc0000077-1510915933:679426..682183 | TCONS_00007497-exon-sc0000077-1510915933:679426..682183 | Clytia hemisphaerica | exon |
| TCONS_00007497-exon-sc0000077-1491911889:682739..683800 | TCONS_00007497-exon-sc0000077-1491911889:682739..683800 | Clytia hemisphaerica | exon |
| TCONS_00007497-exon-sc0000077-1491911889:679426..682183 | TCONS_00007497-exon-sc0000077-1491911889:679426..682183 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000077 | supercontig | sc0000077:679426..683800 - |
Annotated Terms
The following terms have been associated with this transcript:
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0008237 | metallopeptidase activity |
| GO:0004222 | metalloendopeptidase activity |
Vocabulary: Biological Process
| Term | Definition |
|---|
| GO:0006508 | proteolysis |
GO Annotation
GO Assignments
This transcript is annotated with the following GO terms.
| Category |
Term Accession |
Term Name |
| biological_process |
GO:0006508 |
proteolysis |
| molecular_function |
GO:0004222 |
metalloendopeptidase activity |
| molecular_function |
GO:0008237 |
metallopeptidase activity |
Blast
BLAST of TCONS_00007497 vs. Swiss-Prot (Human)
Match: ADA17 (Disintegrin and metalloproteinase domain-containing protein 17 OS=Homo sapiens GN=ADAM17 PE=1 SV=1) HSP 1 Score: 320.857 bits (821), Expect = 3.698e-93 Identity = 226/712 (31.74%), Postives = 351/712 (49.30%), Query Frame = 2
Query: 323 VTFDFHNRQFVLELRQNSDILTDDFDI-------RHHATIDRRELYTGYVKGEFTSDVHVAIDNNDVITGVVYTDAITLRIEPLRGYATNARKREMIIYAHSN--DVTRFSGKKIG---DDDFALMLGKGLKEEGRLKNARKTEQITRKAEENARKTGENTYEFLQDISQKPLFRTRRSNTNKCDFPKKTLCPMYVVADHRFFKYVGGSEKKNTIYHMLQAIRFADKVFKETTWNDGVTCNIGLTVGDFYVLEKPGNFSFNKPADD--NKPEAYQNILQDFSREKSLLPGWK-------SSYCLAHLFTYRDFKDDVVGYAYIGNEDTSPGRYNHGS--HAKSYGICGQQNVAFSSYFNSARNTG--LLTLEANLVTTHEIAHNFGARHDKKKDPTCYLGRESDTGNFLMFDLMVTGRKRNNAKLSPCSIASISRVIKRKSERCFIQQNDTLCTNGVLDPGEECDPG-LFGNDDPCCDRNCNLKPGAQCSDLNHVCCTECQFASG-KLCKERSDADCLEASYCDGTSAGCVNITRDPITDNTTC-DYGKGNCQKEGCVSICNQRGK-EECNCADAGIDACKICCRDKQTGLCSQVLDSEH----VWDGVPCEVNNKIGTCRA-GICVKVKRRVDDEFDALLKDFSFNNLRLFMMKNIVGTILVISILFWAPVACVVHWLDKKQDEEEKFNLNWTLPSNSELVLSRGARKKRL 2356
+TF R F L L +++ + +F + T+ ++ +TG+V GE S V I ++DVI + TD IEPL + + + + M++Y + +V+R K+ D +L KGL + R ++ R+A+ + P K C + VVADHRF++Y+G E+ T ++++ I D +++ T+W++ G+ + +L+ P KP + N ++Y N +D K LL + S CLAHLFTY+DF +G AY+G SP +HG Y G++N+ +S S +N G +LT EA+LVTTHE+ HNFGA HD C E G ++M+ + V+G NN S CS SI + I+ K++ CF ++++ +C N +D GEECDPG ++ N+D CC+ +C LK G QCSD N CC CQF + K C+E +A C SYC G S+ C D+T C D GK C+ C+ C + + E C C + ++CK+CCRD +G C +D+E + G PC V G C G C K + V + F + S N F+ NIVG++LV S++FW P + +VH +DKK D++ + +L+ PSN E++ S + R+
Sbjct: 70 LTFSALKRHFKLYLTSSTERFSQNFKVVVVDGKNESEYTVKWQDFFTGHVVGEPDSRVLAHIRDDDVIIRI-NTDGAEYNIEPLWRFVNDTKDKRMLVYKSEDIKNVSRLQSPKVCGYLKVDNEELLPKGLVD--REPPEELVHRVKRRADPD---------------------------------PMKNTCKLLVVADHRFYRYMGRGEESTTTNYLIELIDRVDDIYRNTSWDNAGFKGYGIQIEQIRILKSPQEV---KPGEKHYNMAKSYPNEEKDAWDVKMLLEQFSFDIAEEASKVCLAHLFTYQDFDMGTLGLAYVG----SPRANSHGGVCPKAYYSPVGKKNIYLNSGLTSTKNYGKTILTKEADLVTTHELGHNFGAEHDPDGLAEC-APNEDQGGKYVMYPIAVSGDHENNKMFSNCSKQSIYKTIESKAQECFQERSNKVCGNSRVDEGEECDPGIMYLNNDTCCNSDCTLKEGVQCSDRNSPCCKNCQFETAQKKCQEAINATCKGVSYCTGNSSECPPPGN--AEDDTVCLDLGK--CKDGKCIPFCEREQQLESCACNETD-NSCKVCCRD-LSGRCVPYVDAEQKNLFLRKGKPCTV----GFCDMNGKCEKRVQDVIERFWDFIDQLSINTFGKFLADNIVGSVLVFSLIFWIPFSILVHCVDKKLDKQYE-SLSLFHPSNVEMLSSMDSASVRI 726
The following BLAST results are available for this feature:
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