TCONS_00007468 (transcript) - C. hemisphaerica

Overview
NameTCONS_00007468
Unique NameTCONS_00007468
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length3120

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00007468 ID=TCONS_00007468|Name=TCONS_00007468|organism=Clytia hemisphaerica|type=transcript|length=3120bp
agaaaattaagaacaaacCAACCTAAAACAACTTAAAACAACACAATGCA
TTTAAAGAGACAGTGTTATTTATCATTGGATTTGAGCACACAATCACTAA
AAGCCCTGGTAACTACAGATGActtgaaaatcatttttgaacaTACAATC
AACTTTGACACAGATTTACCTGAATTTCAAACCAAAGATGGTGTACACCG
ACATCCAGATGGAATTACCATAACTTCACCAACATTGATGTGGGTGAAAG
CGATCGATCAAATGTTAATGGTGTTACATTCATCAGATGAGGTCACTCTT
GATGAGATATGTATGGTCTCCGGAACAGCTCAACAACATGGAAGTGTATA
TTGGAAGAAAGCAGCGGAACTTACGCTCGCTCATTTAAACAGCAATTCAA
GCCTGGTTGATCAGCTACAGGAATGTTTCGCGATGACCGATTCACCAGTA
TGGATGGACGCCAGCACTACACAACAATGTCGTGATTTGGAACAGAAGAT
TGGTGGAGGTTATGAATTAGCTCAATTGACAGGTTCAAGAGCTTTTGAAC
GGTTCACGGccaatcaaattACAAAGATTTATCGTTGCCATCGTGAATCG
TACGTCAATTGTGATCACATTTCATTGGTCAGTAGTTTTGTCGCTTCAAT
ATTCGTTGGAAAATACGCACCTATTGATTACAGTGATGGCTCAGGAATGA
ACTTGTTAAATATCAGGACCCGAAAATGGGAAGAAACACTTTTAGATGCT
TGTGCACCATATCTCTCGGACAGACTTGGTGAACCTGTTCCTTCCAACAA
AATCATCGGAAAAGTATCCGGATATCTTCAACAGCGGTATGGATTTTCAC
CAGACTGTCAAGTACTTGCGTTCACAGGTGATAACCCAGCCGCATTAGCC
GGGATGTGTCTTTCAAGCGGAGATGTGGCGGTTAGTCTAGGGACCAGTGA
TACACTTTTGTTTTGGTGTGACAAAGCGAATCCGAAACCGACAGGACATG
TTTTCGTGAACCCGATTGAAGAAACGGAATTTATGTCAATGTTGTGTTTC
AAAAACGGTTCACTACCACGCCAAGAGGTCTGTGACCGAGTGTGTGAAGG
ATCATGGGAGAAATTCAATGAAACGCTGAAAACAACTCAAGCTGGTAATA
ACGGGACAATCGCAATCAATTTCCGCGAGGTGGAGATTCTACCTCACGCG
AAAGGCGTGCACATGATTAATAGTGATGGCGTTAGGTTATCTGAGTTGGA
GCCACGTGATGAAGTAAGAGCTGTTATTGAAGGACAATTCTTAGCAAAGA
GACTTCATGCTGAGTCGTTTGgatttcaaaaaggCTCCACGTCTCGTATC
TTAGCAACGGGTGGTGCATCACAAAATCCCGCCATTCTCCAAATCCTCAG
CAATGTCTTCAACCTACCAGTTTACACCCTACCCTCTACTTCAAACGCCA
CTTGCATAGGGTGTATTTATCGATGTAAACAAGCCGCCCTTGGTGGAAGC
AAAGCTGGTTTTTTTGAAGCAGTTAAAAGTGTGGTGCCGCCCAAATTGGT
TTGTGAGCCGATGGCTGATGTGGTCCCTATTTATGATAACTTGATGAAGA
GATATGAGACATTTGAAAAAAGTATAGCGGATTCTGATGACTAAATTTAA
GAATATATTTAATGTGGATTCTCGTATGCATTTCCAACTAACAAACAACG
AGGGTATGTTACAGCCCATGTAGATACTTTCATTTGCAAATATGAATGGT
CTGTTGGCAGACGTGATATAAACTGTTCTTGCAAGAAGTAAAGATGAGAT
GTTGTGAAAAGGTATTATCATAAATCTCACAATTCAATGGACTTTGAGGT
ATGAAAACTATACCGTAAGTtgatctaatgtcgacatccctcttctaatt
tcgatacccttctttagagataggaatgaTATGAATgtcggaatcactga
ttaaAACTACAgtaattttctttgcttaacaatcagagaggaaaaatctt
ttctcTATCAGTGATTCCAAGCTTCATATTATTATCTCCaaagaagggtg
ttggaattagatgagggacgtcgacattagaccaactaacggtattcttt
aaaatttgcTTGAATGATGTCATCAGAGCAACTCAGGCTGATTATAGGCA
ACAGTTAGAAACTACAGGAAAAATATCTGATATCTGAAAAATATCTGATG
TTATCTTCATGTATATGTGTAATGCTTTTCGATCATTACTTAGCCTTTTC
AGAATATCACTTCATAAAAGCGTTGAAATTTGAAGGTCTCCAGGTCTAAT
TTCCTCACCAATCAAAAGGGCTGAGGTAGTTTTGTTATTCCGTCCTTTCT
GTCGTTTTATTTGTCTTTTGTGTATTGTTTTCTTGGAAATTGCAACCCTA
TATTTGTTGAATCCATTTATCTGTATTTATATTATGATACAGtttactct
ctctaattcgatcttggGGACTTaaaattttattcgaattagagaaagat
tcgaattacagagagtaatttaaaccccTTTCCGGCTGATAAGACtgaag
aaagattcgaataatagagttcactttctctaattcgattttcaaaggac
caaaaattttattggaattagagaaagattcgaattacagagagtaattt
aaaccattTTCAAGCTGAGgagaccaatattttagttcgaattacagaaa
gttcTGAGTAATAGAGATCGAACAAGAGAGAGTGgactaaatttttattt
atccatttattttttagaatcttaAGAGCTCCTTATGATTTAGGACTCGA
TTTATATTAGGCttattataacaatttttatgtGTGTGTTTTaggcaaat
ttcaaaatattgatagaTTAAGAAAGGAGAAAGCCTTATTGGTCCATTAT
GCTAGCGCTGAATGGGTTATTTCATGTTATATCCCTTGGGTTGGACGAAC
ATTACTAGGGGGTAATCACAGAAGAATTTTCCAGGGGTATAAAGGagcat
tttttcatttttccaggagaTAGAAGattattcttataaattttttttat
atataaaaacacaaggcttcgatggccaaaatattaagaccattttcaga
acattttaaggctttgtgaa
Run BLAST on NCBI

transcript from alignment at sc0000077:417730..428208+

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00007468 ID=TCONS_00007468|Name=TCONS_00007468|organism=Clytia hemisphaerica|type=transcript|length=10479bp|location=Sequence derived from alignment at sc0000077:417730..428208+ (Clytia hemisphaerica)
agaaaattaagaacaaacCAACCTAAAACAACTTAAAACAACACAATGCA
TTTAAAGAGACAGTGTTATTTATCATTGGATTTGAGCACACAATCACTAA
AAGCCCTGGTAACTACAGATGActtgaaaatcatttttgaacaTACAATC
AAGTAAGTCGTGTAGCCAAGAAATCTAAGTTAAAGTCAGTCTCAAAacaa
tttgcagctgagacaaaaaatggctgtaacttttgatagaactCGAGTCA
AGTCGCGATTTTATGTTCGTTGAAAAGATACTTTGAGTGCAATattataa
agaagaaaaaaaattggaaaatgataaaaataaaaatgaaaaatgaagaa
gaaaaaaatcaacttctcgtagaaatgtggtatgattaccattttcacag
gagggatacattcttcaatcttagatcatcattactgtgaaaaaaaattt
tcaaaaatattcgtTCTTTTGATGgtcaaagattgaagaatcactcctgt
gaaaatggtaattataccacatttctacaagaagttgatttttttcttct
tcatttttcattttcattttctttatttttcaaatatttttgcttgataa
tattccactcacaaatattttttcaacgagcacaaaatcgcaacttcatt
caaattctatcaaaagttacagccatttttgtctcagctgcaaattattt
tgagactgactttagtttgattcagtcactaggataaatAATTGTAAAAA
CGTCCCAGCGGTGCCCTAGATTACACTTATGGCCGCGGAGCGTATAAAGC
ACTCAGAAAAGTGAATGTTGGTCGAACTGAGTGGTATGAATGTGCTCAGG
ATAGAAATGTTTGGCGTAATGTGATTAATCGTACTACCTAAATTTTTACT
ATTATTTTATTGTTGgtattttttttagattatatttttatttgtctAGC
GCTGTGATCCTTGTCCTTAGGGCAAGGCCTATGCCCTATGCTTAGGGTAG
GCTCATTCGTCTTCttagttgtgactgaataaatactatgctatattgcc
ataaacgtgtgtcctagcctttcTTTTGAATATGGGCTTAGTCAGCTAGG
CTTGTAAGTCGTATTAATTTTTTGCTGAAAGTTTTCGCTGTAGGCTTGTA
ATATAACATAAAATTGTTTATAATTCATTagaaaaaagttatacattatt
ACTCTTTCTATCAGGCTTGACTTTTTACGTAAAGGGACCCAAcaactagt
ttactagtctatcgTTCTTGTACATCATCAGCCGTCTCTGACGAAAAGGC
TTTATCACGATGTGAGAGATGTACTCGCTAATTATTTTTGTGGATCTTTT
GGAGAAAGTTCTTGTCTATAGTTTGGAGATCAACCGCTAGATAATTGAAG
AAAAATCAGGGCCCTCGAAAAACTGGAGAGGCTTTTATTACTCTCTTGAA
CCATTTTGGATGAGCTAAAAGTGAGTCATAGAAGTCAATGTTTCGATTCC
TATTATTCCTTTTAGCTTTGACACAGATTTACCTGAATNATAGAAGTCAA
TGTTTTGATTCCTATTATTCCTTTTAGCTTTGACACAGATTTACCTGAAT
TTCAAACCAAAGATGGTGTACACCGACATCCAGATGGAATTACCATAACT
TCACCAACATTGATGTGGGTGAAAGCGATCGATCAAATGTTAATGGTGTT
ACATTCATCAGATGAGGTCACTCTTGATGAGATATGTATGGTCTCCGGAA
CAGCTCAACAACATGGAAGTGTATATTGGAAGAAAGCAGCGGAACTTACG
CTCGCTCATTTAAACAGCAATTCAAGCCTGGTTGATCAGCTACAGGTTTT
CTTTAATTGATTAACCTTTTGATTGTAGTGTTCTATCGTAGCTGGTAGCT
GTGTTCAATTCACTTTAATCTTTCCTATCGTTACATGGGCACACCCTTAG
GACCCATGACGTCTTTTATGCAACGCAGCCAAACCTGATCCATTTCAAAG
AATGAAAGCTTTCTGCTAAAGCCTAGTTCTAAATTCTAAAGcgattgttt
ttaaaaagtgacgtcaatgcAGCGGCTTCAATTATATGAAAAAATTAGGC
ACCTCAGATCCTGACGTCAATTTACGTTTGCCAGGACCTGCCTATTCTAT
ACCatagtgtatctcacgtttatcttTTCGCTGTACATTCTGtgtgcatt
gtctgtttgataaaaaaaaattcccgtacggatataataaatagcaacac
tcatcgtccaacactccatcgcagcggtcggtttgaaaaatctcaaatga
aagATAATGACAACAGACTCTCTACGGCAATGAACTTTTGAAATTAGTCG
TAGATTttgtagatactgggtctgtgttcACGTCCTATAACAATTTAGTA
TCCTCAACTTTTCAGGAATGTTTCGCGATGACCGATTCACCAGTATGGAT
GGACGCCAGCACTACACAACAATGTCGTGATTTGGAACAGAAGATTGGTG
GAGGTTATGAATTAGCTCAATTGACAGGTTCAAGAGCTTTTGAACGGTTC
ACGGgtcagtgaaaatttgaagtcctATTTTTAGCTACCTTataactaca
atcatggtcgaaatagaatgagaattctggttattttaacgtttttcaag
atttaaagttctggcgagaaagtcgattttgggctatctctttaacataa
tcgaatatttcaatttgggaggggttggcagacttccaggctatattctg
agccttattggacaatttttgaacttttggatcctgagtcttaagtctag
tgttaaaactcagagttaaaactctacccttcaaacctactttagagcac
ttacaaatcgattgtggtttcaaaacactccggtggatttcccttttttc
tcaagtattacgaccatgattgtagattgaatcttatatatagtttatcg
accgccggaggcggtttctttcatagtggtacgctaatctcgttttgcct
tggctcattactttgtctaccatttactgtcgttttttttaactagatta
cccaggtgcttctcttttttttccctgaatgtcttttattcggaattgaa
taatcgagacatgaaaaatgactatattgtaatctgttttcaatgaataa
tctaaaatgtactggagatgacatgtaggcgttaataatgggcttttcca
gattaaaaacgtataccccctgttgaggaggtccatttccgttccaaggg
ggtaaggtttgatatgtggcggaattccatagggagatacaaaaatctgt
caaaaataactggaattccatagggggtagcttttcaaatcctaccaaaa
gggagttacagcatttccagccacagagggatggacctcctcaacagggg
gtatacggtttttttctggaaaagcccaatgtgcgcgcgctctttttcgc
gagcgtgatgcgttatggaaggcggtcgtttcagtgtggtttacatccac
actgtgacctagaaGTTTTTATATGATAGAGTGTAATGTTAGTTTGTTTC
CCTTACCATATCCTTATCCCTATTAAACTTATTTCATAACCGATTagaat
tgttaaacagttttAGTGGAGGTGGATGTGTTAGCGTAAGAGACATCTGT
ATTTGAAGGCTTTTCACTATTCAAATGTTAAGAATTCGAACCAGTCAACT
GAATCCTTTTTCCTTTCATTCATATTCGGGATCATTGATTTGTAAACACT
AAATTTAGTTTTGACCAGTTCAATCTAAAGTTTGTCTCAATATGATCTGT
Ctggaggcccggaattcccgagttattttttccgagttaaaaaaaccgag
ttaaaaaaaaaccgagttatcccgagttatgacgtcatttttggaaatta
gtgacgtcatttttcattttttaactcgggaatttttgcttcctttaaca
ttCCGagatattttccattttttaactcgggcatttttgcttcctttaac
attCCGagatattttccattttttaactcgggcatttttgcttcctttaa
cattCCGagatattttccattttttaactcgggcatttttgcttccttta
acattCCGagatattttccattttttaactcgggcatttttgcttccttt
aacattCCGagatattttccattttttaactcgggaatttttacttcctt
taactttccgagttatttttcattttttaactcgggaattttttcttcct
ttaactttccgagttatttttgaatttttttgccatGTCGATTGAAAGGA
AATCTAAAGAgagatgaaaaataactcggaaagctaaaggaagcaaaaat
tcccgagttaaaaaatgaaaaataactcggaaagttaaaggaagcaaaaa
ttcccgagttaaaaaatgaaaaataactcggaaagttaaaggaagcaaaa
attcccgagttaaaaaatggaaaataactcggaaagctaaaggaagcaaa
aattcccgagttaaaaaatggaaaataactcggaaagttaaaggaagcaa
aaattcccaagttaaaaaatgaaaaataactcggaaagttaaaggaagca
aaaattcccgagttaaaaaatgaaaaataactcggaaagttaaaggcagc
aaaaattcccgcgttaaaaaatggaaaataactcggaaagttaaaggaag
taaaaattcccgagttaaaatatgaaaaatgacgtcactaaattccaaaa
aggacgtcataactcgggataactcggtttttttttaactcggttttttt
aactcggaaaaaataactcgggaattccgggcctcatCTGTCTGCAGCGG
AGACAACAAAGGGctttaacttttgattgaaattATGTTCTATGTCAAAA
AATCACTCATGTGAAATTGATTATTAtagtacaatttttaaagaagttga
ttttcctcttcattttcaatcttcattttccgatattttctgaatttttt
ctttttgataatgcATGTTCCACTCctgtttatcttttcaacaagcacaa
aaaccgcttttcattcaaattctatcaaaagttacagcctttttgacttc
actgcagattatattgagacagactttaaataACGCCAGAATTGCATGAA
AACAAGGTGATTTCTATACGATTCTTTTATAGAGAGTCAACAGAAtccat
tctttttcaaatttcagccaatcaaattACAAAGATTTATCGTTGCCATC
GTGAATCGTACGTCAATTGTGATCACATTTCATTGGTCAGTAGTTTTGTC
GCTTCAATATTCGTTGGAAAATACGCACCTATTGATTACAGTGATGGCTC
AGGAATGAACTTGTTAAATATCAGGACCCGAAAATGGGAAGAAACACTTT
TAGATGTAAGTATGAATGTAATCACATGGCACtgcccactgacctttata
tatccctggaccaagctatatccgccatctttgattggagtttttttgga
attgctACCCGAGatgaagccattgcaatgttaaaaattaacgtctatcg
gcgctacatcatcaaaagtattcgaggaaaagtagatctagcgctctcga
tgtattctcaccgctattgagtagtgccgccattagggtaccaatttcaa
aaaaactccgatcaaggatttttggttggccgggattgagtaaCTTCGCC
CATGGATATATAAAGGTAAATGGTACTGCCTAGTATGAGATTCCTCTAAA
TTGATAGGCATAATTTTCTTCGAAAGAAATGCTTATACAGTATCGAGTCT
CCATAACTAGAACCTCTTaaactcgaatgtcttctttACTCGATCAACCT
TTTTAACACTGTTTGTTATAATGTCCTATAAAGTCATGCAAAAACGTCTA
CTTCCATCACGAAGCGAATTAAGAAGGCTTGTGGCTCTAAAAATGATGCC
GGTATTGTAAATAGGCTCCATAATCCCTCATTAACTACAAGGAAACACAG
TTTGCATAGGGGTCTGACCCCCTCCCCATTTATGTCTCAATTCAACTTCA
ATTCAATGCAAAGATAAGTTACTTGCCTGCAtaaccgtagcatgaaggta
gagcatccagctacggtgcgcaaggttgtgggttagATCCCCAGCATGAa
tgtcgccctcgactgcggtcgcaaacttactttaGATAACTAGAAATTTA
CAAAACTTGAAACTTATATAAATAAATTGGGGAGCAGACCAGGCTGGTCA
TCCACTGTTTTACAGTCTGTCTAAGCAAAAgtatattaccatatactacg
aCCGGGCCACTTAATTGTGCCATCCAAtctataaaaaaagatttaaatgg
TCCCGAGCTATGTCTactctaattgttagagtaggcaaaaaGTGGACAGA
AAGTCGCTAGTTCAAaactttgcttgaaaaagattctttGCATTACTAGT
ATGGAGTTTATGcaaagatttattttcaagCAAAGTTCTTAACTACAGAC
TTTTTGCCAACAGCCAACTTTTTGCCCATTTTANAGTTtatgcaaagttt
ttttttcaagcaaagttCTTAACTACAGactttttgcccattttaattca
caattagaatcgGCAGGGCGGAAAGTTGGCTTTTAATCTAAAGTAAAGCT
TTTCTGCTTTCCATAGGCTTGTGCACCATATCTCTCGGACAGACTTGGTG
AACCTGTTCCTTCCAACAAAATCATCGGAAAAGTATCCGGATATCTTCAA
CAGCGGTATGGATTTTCACCAGACTGTCAAGTACTTGCGTTCACAGGTGA
TAACCCAGCCGCATTAGCCGGGATGTGTCTTTCAAGCGGAGATGTGGCGG
TTAGTCTAGGGACCAGTGATACACTTTTGTTTTGGTGTGACAAAGCGAAT
CCGAAACCGACAGGACATGTTTTCGTGAACCCGATTGAAGGTATAATGCT
CAAAttttcccagctgacacacaacttTGTTTCAAAGGCCATCTGATGTc
tacaacgtccatataacgttagataaacgttaaaacaacgttgtgtgtca
gctgggttgtTTGAAGTAACAGCACATCAAAGCCACAATGTTCAGACAGT
TAACGTTCAGTTTTCCACCATTTCAACAAAATTCGCCAAACCCGCCAAAT
TTATCAACCCGGGGGAAGAAAATGCTCAAATTTTGTTCCGATCAAAGGTA
TAATGCTCAAATTTTGATTGAAGTAACAGCACATCAAAGCCACAATGTTT
AGACAGTTAAAAGTTTCCACAGTTTTTCCAAACTCTCCAAATTCAAACCC
TTTCtcctaaagaagaaaaattaattcACTTAAGGTATTATTACAGGCTT
TGATTCTATAATATGTAAAATCCAAGTTAATGAGGAATAACCGCTTTTCT
TTCTCACATAATATGCTAACtaagtctgttccaaaaaagTTGGCAGTTCG
TACTATTTTAAACATTTCTTTCAAGGGAAAAAGATATACCGGGTGCGCTA
ACATgtttgtcaagatattgtgagcttatttttattgattcttttttttt
ctatagaGGAAAGCTCAACTTAAATTCCGGTATATGAAACTTTAAAATCG
GTTCAGTCAAACAAaagttatgtttaaaaaaaatgaagatctttaCCTAC
CCAAAATGACAAAACGCGGTCACACGATGGAGAGCATGACGTAACTAATA
CGACAACTTACCCTAAACATTTGTTAATCATATCAGGCGGTGGGCGGTTA
AGCGCCCTCTAATTTCCAATCGGCGTCGGCCATCTATTGTATAACTTTGA
TCATCTGAAGCCTACAAAAGGATATTTTTCTATCGTTCTCTTTTAGAAAC
GGAATTTATGTCAATGTTGTGTTTCAAAAACGGTTCACTACCACGCCAAG
AGGTCTGTGACCGAGTGTGTGAAGGATCATGGGAGAAATTCAATGAAACG
CTGAAAACAACTCAAGCTGGTAATAACGGGACAATCGCAATCAATTTCCG
CGAGGTGGAGATTCTACCTCACGCGAAAGGCGTGCACATGATTAATAGTG
ATGGCGTTAGGTTATCTGAGTTGGAGCCACGTGATGAAGTAAGAGCTGTT
ATTGAAGGACAATTCTTAGCAAAGAGACTTCATGCTGAGTCGTTTGgatt
tcaaaaaggtttgtttttaattgATTTGATCAATTGATTTTGAGACTTTC
TTGTCTGGAAATCATCAGCGTGTCACTTGTGAGTAGTCCCCAAACGGTAG
CAAAATCGAGTGCTTACTTGTGAATAGTCCCCAAAAGGTAGCATAATTGA
GTGCGCACTTGTGAGAAGTCCCCAAACGGTAGCAAAATTGAATGCGCACT
TGTGAGTGGTCCCCAAACGGTAGCAAATAGAGTGCACACTTGAAGTGAAC
TTGTTTGTAATTCTTTCAGGGAAATAACTTTCTTGTAGTTTTGCATTTTT
GGATATGGTAAGCCCGTAAAAAGTGACAGTGGAAAGTAGTGTTAAAGGTC
AAACCAGAAAGACTCACCAAGGCCCGTTTGGCCACTTTTAGGAGGCCAGT
CAGTCTCATTTTTCTTACTATACTTACGAATTACTATCAGCTCGGTATAA
AAGGTAACAAGGTAAGAAGGTACAAGCTCATTTTCGTATATCAAAAGTTC
CGTTTTATGATCTTAATTGAAAatcacaatttcattttccaggCTCCACG
TCTCGTATCTTAGCAACGGGTGGTGCATCACAAAATCCCGCCATTCTCCA
AATCCTCAGCAATGTCTTCAACCTACCAGTTTACACCCTACCCTCTACTT
CAAACGCCACTTGCATAGGGTGTATTTATCGATGTAAACAAGCCGCCCTT
GGTGGAAGCAAAGCTGGTTTTTTTGAAGCAGTTAAAAGTGTGGTGCCGCC
CAAATTGGTTTGTGAGCCGATGGCTGATGTGGTCCCTATTTATGATAACT
TGATGAAGAGATATGAGACATTTGAAAAAAGTATAGCGGATTCTGATGAC
TAAATTTAAGAATATATTTAATGTGGATTCTCGTATGCATTTCCAACTAA
CAAACAACGAGGGTATGTTACAGCCCATGTAGATACTTTCATTTGCAAAT
ATGAATGGTCTGTTGGCAGACGTGATATAAACTGTTCTTGCAAGAAGTAA
AGATGAGATGTTGTGAAAAGGTATTATCATAAATCTCACAATTCAATGGA
CTTTGAGGTATGAAAACTATACCGTAAGTtgatctaatgtcgacatccct
cttctaatttcgatacccttctttagagataggaatgaTATGAATgtcgg
aatcactgattaaAACTACAgtaattttctttgcttaacaatcagagagg
aaaaatcttttctcTATCAGTGATTCCAAGCTTCATATTATTATCTCCaa
agaagggtgttggaattagatgagggacgtcgacattagaccaactaacg
gtattctttaaaatttgcTTGAATGATGTCATCAGAGCAACTCAGGCTGA
TTATAGGCAACAGTTAGAAACTACAGGAAAAATATCTGATATCTGAAAAA
TATCTGATGTTATCTTCATGTATATGTGTAATGCTTTTCGATCATTACTT
AGCCTTTTCAGAATATCACTTCATAAAAGCGTTGAAATTTGAAGGTCTCC
AGGTCTAATTTCCTCACCAATCAAAAGGGCTGAGGTAGTTTTGTTATTCC
GTCCTTTCTGTCGTTTTATTTGTCTTTTGTGTATTGTTTTCTTGGAAATT
GCAACCCTATATTTGTTGAATCCATTTATCTGTATTTATATTATGATACA
GtttactctctctaattcgatcttggGGACTTaaaattttattcgaatta
gagaaagattcgaattacagagagtaatttaaaccccTTTCCGGCTGATA
AGACtgaagaaagattcgaataatagagttcactttctctaattcgattt
tcaaaggaccaaaaattttattggaattagagaaagattcgaattacaga
gagtaatttaaaccattTTCAAGCTGAGgagaccaatattttagttcgaa
ttacagaaagttcTGAGTAATAGAGATCGAACAAGAGAGAGTGgactaaa
tttttatttatccatttattttttagaatcttaAGAGCTCCTTATGATTT
AGGACTCGATTTATATTAGGCttattataacaatttttatgtGTGTGTTT
TaggcaaatttcaaaatattgatagaTTAAGAAAGGAGAAAGCCTTATTG
GTCCATTATGCTAGCGCTGAATGGGTTATTTCATGTTATATCCCTTGGGT
TGGACGAACATTACTAGGGGGTAATCACAGAAGAATTTTCCAGGGGTATA
AAGGagcattttttcatttttccaggagaTAGAAGattattcttataaat
tttttttatatataaaaacacaaggcttcgatggccaaaatattaagacc
attttcagaacattttaaggctttgtgaa
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_004212XLOC_004212Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00007468-exon-sc0000077-1491911889:417730..417881TCONS_00007468-exon-sc0000077-1491911889:417730..417881Clytia hemisphaericaexon
TCONS_00007468-exon-sc0000077-1510915933:417730..417881TCONS_00007468-exon-sc0000077-1510915933:417730..417881Clytia hemisphaericaexon
TCONS_00007468-exon-sc0000077-1575043694:417730..417881TCONS_00007468-exon-sc0000077-1575043694:417730..417881Clytia hemisphaericaexon
TCONS_00007468-exon-sc0000077-1491911889:419307..419574TCONS_00007468-exon-sc0000077-1491911889:419307..419574Clytia hemisphaericaexon
TCONS_00007468-exon-sc0000077-1510915933:419307..419574TCONS_00007468-exon-sc0000077-1510915933:419307..419574Clytia hemisphaericaexon
TCONS_00007468-exon-sc0000077-1575043694:419307..419574TCONS_00007468-exon-sc0000077-1575043694:419307..419574Clytia hemisphaericaexon
TCONS_00007468-exon-sc0000077-1491911889:420145..420283TCONS_00007468-exon-sc0000077-1491911889:420145..420283Clytia hemisphaericaexon
TCONS_00007468-exon-sc0000077-1510915933:420145..420283TCONS_00007468-exon-sc0000077-1510915933:420145..420283Clytia hemisphaericaexon
TCONS_00007468-exon-sc0000077-1575043694:420145..420283TCONS_00007468-exon-sc0000077-1575043694:420145..420283Clytia hemisphaericaexon
TCONS_00007468-exon-sc0000077-1491911889:422947..423134TCONS_00007468-exon-sc0000077-1491911889:422947..423134Clytia hemisphaericaexon
TCONS_00007468-exon-sc0000077-1510915933:422947..423134TCONS_00007468-exon-sc0000077-1510915933:422947..423134Clytia hemisphaericaexon
TCONS_00007468-exon-sc0000077-1575043694:422947..423134TCONS_00007468-exon-sc0000077-1575043694:422947..423134Clytia hemisphaericaexon
TCONS_00007468-exon-sc0000077-1491911889:424396..424669TCONS_00007468-exon-sc0000077-1491911889:424396..424669Clytia hemisphaericaexon
TCONS_00007468-exon-sc0000077-1510915933:424396..424669TCONS_00007468-exon-sc0000077-1510915933:424396..424669Clytia hemisphaericaexon
TCONS_00007468-exon-sc0000077-1575043694:424396..424669TCONS_00007468-exon-sc0000077-1575043694:424396..424669Clytia hemisphaericaexon
TCONS_00007468-exon-sc0000077-1491911889:425576..425887TCONS_00007468-exon-sc0000077-1491911889:425576..425887Clytia hemisphaericaexon
TCONS_00007468-exon-sc0000077-1510915933:425576..425887TCONS_00007468-exon-sc0000077-1510915933:425576..425887Clytia hemisphaericaexon
TCONS_00007468-exon-sc0000077-1575043694:425576..425887TCONS_00007468-exon-sc0000077-1575043694:425576..425887Clytia hemisphaericaexon
TCONS_00007468-exon-sc0000077-1491911889:426422..428208TCONS_00007468-exon-sc0000077-1491911889:426422..428208Clytia hemisphaericaexon
TCONS_00007468-exon-sc0000077-1510915933:426422..428208TCONS_00007468-exon-sc0000077-1510915933:426422..428208Clytia hemisphaericaexon
TCONS_00007468-exon-sc0000077-1575043694:426422..428208TCONS_00007468-exon-sc0000077-1575043694:426422..428208Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000077supercontigsc0000077:417730..428208 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
7.94755	7.35136	10.3056	13.4835	5.06418	3.98014	11.7019	12.335	4.43358	7.06314	5.39721	4.20887	3.29163	3.33818	3.13402	5.93456	5.38579	5.86911	1.6184	2.30859	4.32503	4.43882	12.0294	10.319	4.94684	7.03725	8.99164	7.4765	5.48771	6.03862
Blast
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BLAST of TCONS_00007468 vs. Swiss-Prot (Human)
Match: XYLB (Xylulose kinase OS=Homo sapiens GN=XYLB PE=1 SV=3)

HSP 1 Score: 540.036 bits (1390), Expect = 2.652e-180
Identity = 252/526 (47.91%), Postives = 350/526 (66.54%), Query Frame = 1 
Query:   49 HLKRQCYLSLDLSTQSLKALVTTDDLKIIFEHTINFDTDLPEFQTKDGVHRHPDGITITSPTLMWVKAIDQMLMVLHSSDEVTLDEICMVSGTAQQHGSVYWKKAAELTLAHLNSNSSLVDQLQECFAMTDSPVWMDASTTQQCRDLEQKIGGGYELAQLTGSRAFERFTANQITKIYRCHRESYVNCDHISLVSSFVASIFVGKYAPIDYSDGSGMNLLNIRTRKWEETLLDACAPYLSDRLGEPVPSNKIIGKVSGYLQQRYGFSPDCQVLAFTGDNPAALAGMCLSSGDVAVSLGTSDTLLFWCDKANPKPTGHVFVNPIEETEFMSMLCFKNGSLPRQEVCDRVCEGSWEKFNETLKTTQAGNNGTIAINFREVEILPHAKGVHMINSDGVRLSELEPRDEVRAVIEGQFLAKRLHAESFGFQKGSTSRILATGGASQNPAILQILSNVFNLPVYTLPSTSNATCIGCIYRCKQAALGGSKAGFFEAVKSVVPPKLVCEPMADVVPIYDNLMKRYETFEKSI 1626
            H  R+C L  D STQ +K +    +L + +E +++FD DLPEF T+ GVH H DG+T+TSP LMWV+A+D +L  + +S      ++  +SG  QQHGS+YWK  A+  L  L+ +  L  QLQ+CF+++D PVWMD+STT QCR LE  +GG   L+ LTGSRA+ERFT NQI KIY+ + E+Y + + ISLVSSF AS+F+G Y+PIDYSDGSGMNLL I+ + W +  L ACAP+L ++L  PVPS  ++G +S Y  QRYGF P C+V+AFTGDNPA+LAGM L  GD+AVSLGTSDTL  W  +  P   GH+F NP++   +M++LCFKNGSL R+++ +     SW  F++ L++T+ GN G +   F  +EI P   G H  N++  +++      EVRA+IEGQF+AKR+HAE  G++  S ++ILATGGAS N  ILQ+L++VF+ PVY +  T+N+ C+G  YR      GG+   F E VK    P+L   P      +Y+ L+ +Y   E+ I
Sbjct:    4 HAPRRCCLGWDFSTQQVKVVAVDAELNVFYEESVHFDRDLPEFGTQGGVHVHKDGLTVTSPVLMWVQALDIILEKMKASG-FDFSQVLALSGAGQQHGSIYWKAGAQQALTSLSPDLRLHQQLQDCFSISDCPVWMDSSTTAQCRQLEAAVGGAQALSCLTGSRAYERFTGNQIAKIYQQNPEAYSHTERISLVSSFAASLFLGSYSPIDYSDGSGMNLLQIQDKVWSQACLGACAPHLEEKLSPPVPSCSVVGAISSYYVQRYGFPPGCKVVAFTGDNPASLAGMRLEEGDIAVSLGTSDTLFLWLQEPMPALEGHIFCNPVDSQHYMALLCFKNGSLMREKIRNESVSRSWSDFSKALQSTEMGNGGNLGFYFDVMEITPEIIGRHRFNTENHKVAAFPGDVEVRALIEGQFMAKRIHAEGLGYRVMSKTKILATGGASHNREILQVLADVFDAPVYVI-DTANSACVGSAYRAFHGLAGGTDVPFSEVVKLAPNPRLAATPSPGASQVYEALLPQYAKLEQRI 527
The following BLAST results are available for this feature:
BLAST of TCONS_00007468 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
XYLB2.652e-18047.91Xylulose kinase OS=Homo sapiens GN=XYLB PE=1 SV=3[more]
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