TCONS_00007448 (transcript) - C. hemisphaerica

Overview
NameTCONS_00007448
Unique NameTCONS_00007448
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length4474

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00007448 ID=TCONS_00007448|Name=TCONS_00007448|organism=Clytia hemisphaerica|type=transcript|length=4474bp
GAAAAAATCCCGGAAATTTAGGTTAAGCTTAgttcttgaaaattttgtaC
TGTATATTTTCATCTTTCCAGAccttaaaacattaaaaagaaaaaaaact
aaaaagaaaataatttcagaACCATCAGATCATGCTTGGGCAGTACTCTC
GGAACCCTCTGGTGAAGAATTATCTATACAGACTTGCTGAGCGACAGAAA
CCTATTGATACGGATAAGTGGTATTATTTGAATAGTGAGCAATTTCCAGC
TCATTTACAAAGCAAGTTTCTTCAAAATTCATTGGACGAAGAAACGGAAG
AATTCTTGGAGAATTGTTATGAGAAATCTGATTGGATATTCACTCAAATC
TTCCACAATGTTTTCAGAGTTGTGTTAGGGTGGTTCATGTCAATGACAAC
AGTCAATggGTTATTAAACCGTGGTTCCATGTTCGTCTTCTCGGAGAACC
AATTCTTGGAACTACTCAACGTCAATAGCTCAAGTTACCATGGAAACTCG
TATCTAGATCTCGGCGCCGGTGATGGGAAAACAACGGGAAAGTTGATCAA
ATATTTCGACCAATCATACGCGACCGAACAGTCTCCCACAATGCAATGGA
GGCTCAAAGAAAAAGGCTTTCAGATTCTCGAGATAGACCAATGGCAAACG
CCAAACAAATACTCCTTGATCACCGCCCTCAATTTGTTAGATCGAATCGA
CCATCCGGTGAAGCTGGTCAACGAATTACGGACATCCATTTCAGACGATG
GATTCGTCATATTAGCGATTGTGTTGCCCTATAACCCTTGTTATGAAACT
GGAGTTTCATTCCGTGACCCGTCCCAATACCTCCCCATTTGTGGTAAAAC
AATAGAAGAACAAATCTTATCTCTACACGACGACGTTTTCGTTCCGGCAG
GTTTCGACGTCGTCCGTTTCACTCGATTACCGTATCTCTGTGAAGGAGAT
TTGAATCATGATTTCTTTGCTTTGAATGATGTGGTGTTTGTCTTGAAACC
GAGGCTGGGTCATGAACACGAGGTTAATAGAGTAAGTTCTGACTCACACT
GTCAGGCTGGTAATGTTGGGTAAGTCTTTCTATGGGAATTGGGGGTAGGC
GAgggactacacgttttttttataacaacattcaaaatttttgaagcctt
aatatgttcttaactttttggcttttaaaccaaaaaatattcttagcatg
ttcttatttttaccattttgtgagcatttttgctcattttcttaagaaat
cggttGTTTTAGAATCCATAAAgccttgaagtttttttaacttgttctta
gcatttttgtcatcgaagccttatgttcttatatagttttttcttataaa
aaacgtgtaaattgtTCCAAAGAAAAGCATTCTGCAAGATTTTTGGTATT
CACATGGGATTAGGCTTAAAGAATTAGATAGATTCTTTGAGCTTTTCTAA
CCTCcgaattttttacaatattatgGTTTTTATAAACAGGattatttaaa
gaattttttattcCAATTAACATTGTATATGTATTAGATTATTATAATTA
TATTGATAATAGCTGTAAGGGACCCTTTTGTTTAGTGTGCTTATGCCATA
TTGTTTTTCTTGGTAAGATTTTCCATAGAGTGAGCTTTCGTCTGTTTGTG
CGATGGGAGCGTTTGTCACCttttataaatttgaaattttcagtgtcTTA
AAGATATCTCTGGATACTCTTTCCCCCCAAGCAATTGATCGTATTTCTTT
TATCGTTTTAGGCTTAACATACAAATGAACTCAAAAATGAATAATAAAAC
GAcgaaaataaataaagaaaatgtgacCAATGAAAACGAAGGAGATATGA
CCACGCCCTACATCAGCCTTAATGGTTTACTATTGAAACCCAAACAAAAG
TCAAGCACCCCACATCACGCTTCTCTTAACCGAGCTTTTGCAGAACGCCT
TAGACTATTGTTATCTGATGGGAAACAAAGCATGGGGACTTCAGATGTCC
GATACCCATCCAATGTTCCTCGTAAAGCTAATCTACTTCCTCCAACAATG
GcgagaaatattataatcaatAACCCAAAGAAATCGGTTcctgaaaagtt
aaaaacatttggaAGCGTACAGAATGTGGCTCGATATCAACCAATAACCA
TCACCCGAAAGGACCAACTATCTTCTGAAACCAGTAACTTGTTGATTGAA
ACACCAAAGAAATTGGTCACTGGACAGTTAGGGACACCTCAAAACCAGGC
TCAATCTCCCAGGATTGTCTCCCAAAAAGAGAATCTATCACCTACTGGTG
TGACAAATGCTTTGGTTGAAAAGTTCAAAAGAAGCTCTATCCCTGAAGAA
TTAAGAATATTAGAAAGgaaccaaaacgaggctgaaaacaCTGTTAATAC
TTCTTGTAAAGCAAAACTACTTCCTTATACGGCTTGTAATATACAAGACA
AAACAAAAAGGAAATCGGTCTCCGGAGAATTGACTCTCCGAAACGTCCGC
AATGAGACTGCTCAACATATTTGTAATGTCAACCGAGAGGACTTCATCAG
AACgagtaaaattttgattgaGAAATCAGATATGAATGTAATCACTGACC
AGGTATCAACGAATCAACACACCATTGAAAACAAAGACGATTTGTATTTT
GATCCAACTGGTTTTGGAGATTCAGTTAATCTTTGGGGATTTGTTGGTGA
TTGCAGAGAATCTGACTCCAAACATTTAGAATCTCAGAATGAAACATTTG
TCGATCCAAATATGGAAATTAAAATTGAACTCGATCTTGATTCTGAAATG
GAACCTCTGATTAACGACATTGACTCGATTCAGGAGGCTGAAAACATTAA
CAACAATGCAGGCTTCGATAAACTCAAACAAGGTGAAAATGAATTTATTA
CGAAGCCAAATCTGGATATGAAGGCTGAATTAATCCCTGGTGTCAAAAGC
CGAGAGGGTGAAAACATCAGCAGTAAGACTAGCATCGTTAAACGACTCCA
AAGTGACTGTCAAACTTATGAATATGGTATAATTCCTGGCAGTGATATTT
GGAATGTGGACGAGGATAGAGAATTTGTTACTTCGGATATTGGCAATATT
ATGATAATCCCAAACGATGAGAATATAGATTCTAGAGGAACTGTTACCAT
CTCTCAACAGGTTGACTTTAGTGGTGGATATCCCGACCATGTAATCTTCC
CCAATGATACTAACGATAAAGGAAATTCAGATCAAAACTCCTTTAATACT
GAAATTCAAGTAGTTCCCATTCCACCACGTAGGGTTCCGAAACAAAGGGA
ATTGATGGAGTGCGATGTTTGTGGGATGAAATTTGCAATCAAAGAACTGT
TGAAAAACCATAAAAAGCTACATCAAAACACTGAACCGTTCGGCTGTAAG
GATTGTGGTaaactatttaaaaaagaaatcaatttgACAAAACATATCAA
CTCTGTTCACAAGAATCGAATTCAATGTGATGTTTGTGGGCAGTCAATGT
CGTCATTGGGCTACTTGAAGAGACATCAAATTATTCACATATCTGTTGAG
TGTAAAGTTTGTGGTAAATTGTGTGCAAATCAATTTAAGCTTAAGGAACA
TCAAGTTATTCATAATGCGAAAGCTTTTCAATGTGATGTTTGTGGGAATT
CTTTTACACAAAAAGCTTATTTATCCAAACATAAAGATATGGTTCACAAA
GGTATAAAACCTTTCAAGTGTAATGCGTGTGGGAAGTATTTTGCACAAAG
AGGTGATCTTCGAGTTCACATTGCTGCTAAACATAAGCAAGAGAAAGATT
TTAAGTGTTATGAATGTGGTAAAATGTTTCCATTAAAAAGGTATTTGAAA
TGTCACATGGAGAGAATACACGAAGGGGTTgcacaaagaagaaaaagaag
gaatTTATCGTCAGTAACTGTACTCCCAAAACACCCGCTAAACCAAGACT
TTTCTAATTCAGGAGCAAACCCTTAAAAAATAAGTACTTCAAAAAGTATG
GAATTGACGAATTTTTGCTTTTTCATAGAAAGTTGTTTTCCAAGCTTTGT
CATtctgatgttttgttttttcacgTCAATTCTGTCAACAgcttaaagct
ttttaaaagcGATTATTTTATGAAATGTTTTAGTGACACAAAAAAACTAC
CGAtcctctttttgattttttttccttgGAATTCTTTAAATTGTTCATTC
TAGTTCAGTTTATAATTTCGTTTGAATCTATCATAGCaggggggggtgaa
gcagttagtacaagacatcatgccggttagtaccgtggtggtgtgccata
tgaattggataaaatcacttagtactcagatgtactaactgcaaaaaagg
gtggtcccctgctaaaaatttgccaaattttggtactaattgtgtaaaaa
ataggattttgtgagaaaattaaaaaaaaaagaccatattttaccaaaaa
aattttttgggaagtagatttttt
Run BLAST on NCBI

protein sequence of TCONS_00007448-protein

>TCONS_00007448-protein ID=TCONS_00007448-protein|Name=TCONS_00007448-protein|organism=Clytia hemisphaerica|type=polypeptide|length=733bp
MNSKMNNKTTKINKENVTNENEGDMTTPYISLNGLLLKPKQKSSTPHHAS
LNRAFAERLRLLLSDGKQSMGTSDVRYPSNVPRKANLLPPTMARNIIINN
PKKSVPEKLKTFGSVQNVARYQPITITRKDQLSSETSNLLIETPKKLVTG
QLGTPQNQAQSPRIVSQKENLSPTGVTNALVEKFKRSSIPEELRILERNQ
NEAENTVNTSCKAKLLPYTACNIQDKTKRKSVSGELTLRNVRNETAQHIC
NVNREDFIRTSKILIEKSDMNVITDQVSTNQHTIENKDDLYFDPTGFGDS
VNLWGFVGDCRESDSKHLESQNETFVDPNMEIKIELDLDSEMEPLINDID
SIQEAENINNNAGFDKLKQGENEFITKPNLDMKAELIPGVKSREGENISS
KTSIVKRLQSDCQTYEYGIIPGSDIWNVDEDREFVTSDIGNIMIIPNDEN
IDSRGTVTISQQVDFSGGYPDHVIFPNDTNDKGNSDQNSFNTEIQVVPIP
PRRVPKQRELMECDVCGMKFAIKELLKNHKKLHQNTEPFGCKDCGKLFKK
EINLTKHINSVHKNRIQCDVCGQSMSSLGYLKRHQIIHISVECKVCGKLC
ANQFKLKEHQVIHNAKAFQCDVCGNSFTQKAYLSKHKDMVHKGIKPFKCN
ACGKYFAQRGDLRVHIAAKHKQEKDFKCYECGKMFPLKRYLKCHMERIHE
GVAQRRKRRNLSSVTVLPKHPLNQDFSNSGANP
Run BLAST on NCBI

transcript from alignment at sc0000077:115423..129235+

Legend: exonfive_prime_UTRCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00007448 ID=TCONS_00007448|Name=TCONS_00007448|organism=Clytia hemisphaerica|type=transcript|length=13813bp|location=Sequence derived from alignment at sc0000077:115423..129235+ (Clytia hemisphaerica)
GAAAAAATCCCGGAAATTTAGGTTAAGCTTAgttcttgaaaattttgtaC
TGTATATTTTCATCTTTCCAGAccttaaaacattaaaaagaaaaaaaact
aaaaagaaaataatttcagaACCATCAGATCATGCTTGGGCAGTACTCTC
GGAACCCTCTGGTGAAGAATTATCTATACAGACTTGCTGAGCGACAGAAA
CCTATTGATACGGATAAGGTATTATTTATGTACCTTAGAAATTTTTagtg
tcatttttcaatttattcatgatattcatgacaatgttttctacggaaat
accccggttttagctagtacatgttttttttataagcaagtgtatgcccc
ttggtcaggctcgtgtatacttaagttcttaaagcatccaggcataggtt
atgcttattatatgcttatgaatcatgcttatgattcacctcgagccaag
tttttagtgaaattttgtaaaaatttgttcagattttgggagcagtgaaT
CAGGGAAACCgtggaaagtcttttttttttacttgacatctaccaaacct
ttttaaacagataaaaatgacaactggaaaaatatttcaggctgaaatat
atgcttatgttatgtttaggaattttgcaaatctgagccttcatatgctt
ataagcgttatgcttataaagaaaaacatgtagtggcaaatttaaaccag
acaaaagttgtataaaattttcttttgcgtCTTTTGTCTTtgcgtagaaa
acattacgtcatgaatatcatgaattaaaagAAGTTCGGACAAGCTTTTT
TTCGCACTTCTATTCGCTTCTATTTAGCTAATTTTAGTTTTGTTTGAATG
CTTGAATCCAAACGTATATACCGTTCCtaaaaattctgaattttctttct
caacTATTATGGTGCtctaaattatcttttcaacagtaTATGTGAGAATT
CGTTTGAAAATGGCAAGGAAAACAAAGATTAGCGCACACTTCAAGCAAAT
AGATTTAAGTAAGgtggaaataaaatcctaatCCGTTCAAATACTTCCCA
AGTATATAGATCATACCAATACCctactggtctgtaaaatacacaaacag
agGCAATATTGTGAAACAGCTTGATTTTCTATTCTTTTAGTGGTATTATT
TGAATAGTGAGCAATTTCCAGCTCATTTACAAAGCAAGTTTCTTCAAAAT
TCATTGGACGAAGAAACGGAAGAATTCTTGGAGAATTGTTATGAGAAATC
TGATTGGATATTCACTCAAATCTTCCACAATGTTTTCAGAGTTGTGTTAG
GGTGGTTCATGTCAATGACAACAGTCAATgggtaagaatattttttggac
ctaccccggagGGCCTTTAATTTAACCcgtgtccgttcgttcgtctgtta
ccagcttttctcgcgattgactcattagttttttttcctgatttttggca
caacgatgcaaaatggcaatacccaaaatgtgatggagcccgattttaga
aataaaaaaattttaggctaaaaagtgcctaaaaatgagGTTTTAATACT
TTGTGTGGAATTGCTTGATTAGTTCTTTCTGATTTTCGGCAAAAATATAG
AGGATAAATTCCCTTCTGTTATTTtaagggaaaatgagcatttctcgcaa
ttggcttggtatttttttctgattttctaatttgtatttttctcaTTACT
GTCGCCATGTTTTCTGAtgttctatttttattttctatattttctatcag
gtaggtccattcagcatgtagcttgttctCCACTGTGAAGTCCTAACCCC
CAAATGTGTGAAACAATTGAAAGCTAAAATGGTTGATACTATCAGATAAA
GCATTAAATTCTGAGCAAAAGAACAATGTTACAACAAGTCTTGTACTCAA
ACATATAAAGAAATACACGCTTTTGAAGTATAAAATTCTGTCAGTTAAAG
TACGATTGACGTAAAATTTTGTCCAAAACGTAACAGATTTCACAGGATGT
AATTTTGAACTCTAAATGACCATTTTTACTCAGCGAATGTCATGCTCCAT
TCGTTTAATTAGTcgattttttactcattttgagGGATAGGAGTTTGCCT
ACGATTTCAGTTTTTCGGCCATAAAAACTTATGCTAGGCCTTATTCCTGA
AGtccctctcaaaaaagtttgataatcCTATCTTCTTTCGAACCAATCAC
CAGCGGTTGCGTCCCACAAAAGATGTTACAGATCGTGAGGATTGGCCCCC
GACTATAATAAGTTAAGTTTATCCTCATTGACTTTTGAAATGAACGAAGA
AAAAGCTTTCTTGACAGAAGCTAcattaagagaagaaattttggcgaatg
agccctttcgcggaaagaaattttggcgaatttggcaaaaattttaggca
cttcgccaaattcgccaaaattcatttccgccaaaatttcttaccTTAAG
CTCTTCGTTGTGCCTAAAATTTAAAGGCTGGTTGCTAGGTAGCAATCAGG
AAATAGATAGttattgcaataaaaaagttgatataaATAAACGAaataat
aaaccagccgaggctggaaggtcagccaatagagcttagccagatagctt
taataagtgggttaacagatgtaagagatgcaatgaaacagagtagacta
aatatgttgaataatgtacaaaatgagANNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNaactgggagtcctctcttctgtgccaagcactggca
gtgttttttaaactttaaaacaatgttaaatgaagaccagattgatctgt
ttgttatggctgtgcaagatgtgacgagagtgtgcacagcatgttgtgta
acttgacggcagcCCCCTTtcggcaagtctgataagagatatctataaac
tgttatcggcattcattccattccatcattcagtcaaaatgtgcgccaag
gttagaaaaggttagaaaaacacaatctgcgtccggaactgcgtgaaaaa
tagtttgatcNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNatgatcaaattccaaagaccatttgtcat
aattttgcaagtccaataataggagatgtgatgtcatcatttggttcccg
tcatctgatttaCGGTTACGAGCTGGAGGGTcagaaagcttttccgctgc
tttgctggatttccactgtcgacctctgcatgctctgtgtttaaaagttt
tcaaatcgaagtagagagccgcatgctaatggagagtaaaccgaaaacac
caAATTTATCCACggttctcaattttaaaattcggatcagtccacacgaa
ttcccttttaacaagatgtatagctgcttcttaacagaaaaatattttcg
actgaccggctgaacgactcccactttttaaagtagaaatgacgggaacc
aaacaggttttgcgattcgcctttatcacaaacacgaccaagtccaaaaa
agcacgattgcatccagtctttatatcaaatttatacagtagctgtactt
ttgtaaactttatcaaatcccaataacattataacaccatcaNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNaaatatgtttttattgcaaaaactattaaaaagcagcaataaaaag
tatatatcagaaaattcaacataaacaaaaacttgagcaaacggctttaa
acctttaAAGGatatagaaaaagaatccccttgatgaaaatcatgtgttt
gatttgctgagttaaaaaaataaatgacagaaattgaagcttgcaacaga
tttacactggacactggaaatactttggtacaatgttatcacatctgact
atcgcttgagccgccatcttgaaactacattatgatctgtaaaaacaacg
cacgctaaaagtacccaaaaagttaacccgatcggaagaaagtttagaaa
tcaaagtgagatcggaaaatcggattttttttttgccgtcttatgatgat
gatgatggaaaattttacctatttgaatgctcagcttaggctgaccaatt
atgAATGTTACAAACAAACTAATTACtattatcaaaaattacaaattaca
GTAAGAATGCCTCTTATATGTCTCTCATCCGAATTGTTTGATTTCCCCCG
TCCCAATTTTCAATTTACAAATATTTAAGAAAAAGTGATGTTTTcgtcaa
gaatattttcatgaATTAGCGTCTTGCGAAATGCGATATCTACCATATGG
TATAAAgagtgttgtttttttctgtgaAAAATCATCTTGAACTTTAACTT
CAACAAGCAAACACAAGATACAGCACCAGGAGAAGAATTCAAACCACAAA
CTAAAATGAAGACCATCATTGCTTTTACACTTTTCGCCGGTAAGTTTTTG
GATTTCACATTTTTGCATTTCTCTGAATTTTAGTGCGTATAAGTATGAGT
ATAAGTATAATAATCTAATTTGCTTTGTGAAATCCATTTCCCGTCTCAGA
CGCAAAAACCTTGCTTCGACCACTGTTATAGCTTCAACCTTGTAGATTAA
TATCTGTTCCTTATCTTTACAGTTGCTTCGGCCATCACCAACCCACCCAT
CACTGGAACAACACCACCAGCTATTCCATGTCCTAATTCATTATGTAACG
GAAAATATGATGATAATTTCGCCTTACCGTACTACAAGAACTATTTTGTC
CAATGTGTCGGTGGTTTGGCTTACTGTCAAGCTTGCTTTCCTCTCTCCCT
GGAATTCAGTCAAACTTGCAACCAATGTTTGTACAGCAAATATGATAACT
GTCTGACTACACAAAAATGGCACCCAGCCACCACTTTCGCTTGCCCAGAC
AAATGCCCCCATTATGGACCAGAATTCAGTGGAAATATTGAAGATCCAGA
TCAACCACGACAATATGTTGCTTGCTGGAAGGGAGTTACTGTCGGATGCG
TTGCTTGCCCAggaaatttgaaattcaacCAAAAAGAAAACGCTTGCTTG
TACGATGGCAAATACCTCACCAAGTCATCCCATTAAATTCGGATATAACt
gtaattcttttcaaaacgaATTTGTATTTTGTTATTCAAGTTATTTAAGA
ATCCTTATAAATTAGACATTTTAagttcaaagaaaatattatagTCAAAT
CAAGATATAAAAACAAATTCTTTCTTTCACCCTGTCACGCTGAATCTAAC
GGAAACATGAAATTTAcgattttctgactttcaaaattcgacttaaaaag
ccccccccccccctNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNtaaaaaccccccccccccc
ccttgataACGTAATTTTGACCTTGTTAAGCAAGAAGTTTCAATGGGCtg
ctccaaaaaaaatttttgccccGTGttgaggaggtcatttttaGAAGGCC
AAAATATTCATGACCTTCCCCCCCTggatttttaagccaatttttgaGCT
ACCATCTTGGATTTTTGCCTAAAATTCCCTGGatttttcacacattttca
TTGACCCCTATggattttctttgttcttaaGGGGTATCCCCctggatttt
tcaattttccagaCCCTGCTCCTCAACGTGAGGGTGCGGAtgttttctgg
aatagcccaattctACGTAACATTTGGAAATTTCTTGTATAATACTGTAA
GTAAGTTGGCTGAGCCCATTTTAACCCTCAGCTCATGGACTTAATAATGA
GACTTAATGTGCTCGGAATCTCTTTCAGGTTATTAAACCGTGGTTCCATG
TTCGTCTTCTCGGAGAACCAATTCTTGGAACTACTCAACGTCAATAGCTC
AAGTTACCATGGAAACTCGTATCTAGATCTCGGCGCCGGTGATGGGAAAA
CAACGGGAAAGTTGATCAAATATTTCGACCAATCATACGCGACCGAACAG
TCTCCCACAATGCAATGGAGGCTCAAAGAAAAAGGCTTTCAGTAAGACGC
Aattaaaattacttttaaaggttttatttttacatgagtgatcccgtttc
atatcagacacatgtttcatatcaggacggaTTCTCCCTATTAGTATATT
GTACCGataagcaaaaaattgtttttctttaccTCTTTCTgatgaccaat
cttgctccacattcgtttTGATTTAGTGTGAAAAAGcttgcaaattaaaa
ttgatgagcaaTTGATATCGctcttatttaaaacaaaaatctttaaaccT
AAAATAGCTCTACAATCAGTTCccaaatacttggcacaaaagggaaattc
cccacgaaattttataaccacaaacaatttggaagcgctctaaattaggt
tggaaaggtagggttttaactctgagttttaacgctagactgaagactta
ggaccttgagatctgaggatccaaagttcaaaaatggtccggtagggctt
gaaatatagcctagaaaccaacaaatccctcccagattgaaatattcgat
gaaatcaagttgaatgTCCGAAAtcgacattctcgctcgaacttcaattt
tcgaaaaatggtaaaatagccaaaattgccaatatctTATGGCACTGGTT
GTAGATCTAGATCCAGCTATAAAAATCTTGTTAGGCCATACCAAACTATT
AATGTGTCCTATTTTTCATTCCAGTTAAAAAAATCTAACCATCCCTTAGC
GATGtcttgaaaatcttattttttgcagtttttttaCAAAGTCACGATCG
TGGTGGTTTccattactttgaataaacgcccacttttttccttttaggag
gaggggcgtttattcgattTTCGTTTTCTTAGACAGCGAATACGTCATTT
TATTGGAGATGTAAAAACAGTCGAAATTAGTTTGAATACTGACaggataa
aaaaattattaacatTCGCCTATCTGCTTTTTCCTCCATATGATTCTTCC
TAACAATTATTGCTTCTATAACGCCCTCCTTGAGGGGAGGTATTTATTTG
ATGGGGGCGTTTCGAAGAATGGTAACTAAGAATGGTATGGTTTGATggtt
tgaatatggggggtggaggatataacaattttcagtgatttacccccccc
cccccggacaaagtgacttttggtcccccggacaacgggttttccccccc
ccccggacaaagtgacttttggtcccccggacaacgggttttcccccccc
cccggacaaagtgacttttggtcccccggacaacgggttttccccccccc
ccggacaaagtgacttttggtcccccggacaacgggttttaccccctccc
cggacaaggcaaaatttgatgatttttttttaaaaaatttttttaaattt
ttccccccccccccccccccccatgtacggacattttctggaagagccca
ctgtgaaatagattttttttctgagatAACATTTAGCTGAGTCAGAAAAA
CTTGTTTCTTGGAAACTCTCATGGTATTAAGAGCCAGTACCCCTATCGAA
ATATTTTTCCGCATATCTTCACGCATATCTTCACACCAGGATTCTCGAGA
TAGACCAATGGCAAACGCCAAACAAATACTCCTTGATCACCGCCCTCAAT
TTGTTAGATCGAATCGACCATCCGGTGAAGCTGGTCAACGAATTACGGAC
ATCCATTTCAGACGATGGATTCGTCATATTAGCGATTGTGTTGCCCTATA
ACCCTTGTTATGAAACTGGTATGTTAAAgtcttttttgataaatatttgT
CTAACATGCTAGACGACTAAAGCCGGTCTCCGCTTgtgcgcgctgcgatc
gcaccttttggcctcaatcctttttgcttggaaaaaagataacgtcataa
aaatgtagcgcgcgctcgaaaaaaaagttgaacacatttcaacttttttc
aaccgttacgtcagatcgtgccaatggaattgcttcatttttcaaccgac
caatagcgtggaagcatTGATCGAAAAAGGGCGATGAAAGCGCCTGCAAA
TGAAGACTGGCCTTAATACAAGGTAggaaacccgggggggggtacNGGAG
CCACTATCGAAATGTTTTTCCCCTTATCTTCACACCAGGATTCTCGAGAT
AGACCAATGGCAAACGCCCAAAAAATACTCCTTGATCACCGCCCTCAATT
TGTTAGATCGCATCGACCATCCGGTGAAGCTGGTCAACGAATTACGGACA
TCCATTGCAGACGATGGATTCGTCATATTAGCGATTGTGTTGCCCTATAA
TCCCTGTTATGAGACAGGTATGTTAAAgtcttttttgataaatatttgTC
TAACATGCTAGATgactaaaggccggtctccgcttgcgcgcgctgcgatc
ccaccttttggcttcaatcctttttgcttggaaaaaaattacgtcacaaa
aatgtagcgcgcgctcgaaaaaacacatttcaacttttttcgcaACCGTT
ACCTCAGATCGCGCcgatggagttgcttcatttttcaaccgaccaatagc
gtggaagcatCGATCGAAAAAGTGCGATGGAAGCGCGCGCAAATAAAGAC
TGGCCTTAATACAAGGTAGGAAATAAGGGAACAATAATGGAGGAATAAAC
TGATATTATTCCGTTACAATTATCACCCATATTACACAGATGTTTGtgat
ataatttgtttttttactttcatCTGAAAAAACCAAATTCTTAGCAAAAG
GCACACTAAATAACTAGTAGACTTCAaatcttgaatatttttgtttaaaa
actcagTGCCAATAAGGATGTgaacactttggaaaatttttatcatggta
tataataaatcttttgtagaaaaaaagaTTGGTCGAGTTAAGGGACCACT
CGCATGCCCTGAAAAAGATAAATTTGAATTGAGGatgtttatttgatttt
taaatgaaaaatggccACTGAAAAAGAAGGAAGTACgaatgttttaaagt
tttggaaGTCTTTACTTCTCTTGGGAATCGAAAATCGTTATTTCTAGTAG
GTTTTCTACGCGATCTAACCCGTAGGAATGACGCTTGGGAAAATTTGATG
ATATGAGTGGCCCCTAAAACTGACGAATATTCCTTCAAACATCTTCCTTC
TTCACTTTGCAGGAGTTTCATTCCGTGACCCGTCCCAATACCTCCCCATT
TGTGGTAAAACAATAGAAGAACAAATCTTATCTCTACACGACGACGTTTT
CGTTCCGGCAGGTTTCGACGTCGTCCGTTTCACTCGATTACCGTATCTCT
GTGAAGGAGATTTGAATCATGATTTCTTTGCTTTGAATGATGTGGTGTTT
GTCTTGAAACCGAGGCTGGGTCATGAACACGAGGTTAATAGAGTAAGTTC
TGACTCACACTGTCAGGCTGGTAATGTTGGGTAAGTCTTTCTATGGGAAT
TGGGGGTAGGCGAgggactacacgttttttttataacaacattcaaaatt
tttgaagccttaatatgttcttaactttttggcttttaaaccaaaaaata
ttcttagcatgttcttatttttaccattttgtgagcatttttgctcattt
tcttaagaaatcggttGTTTTAGAATCCATAAAgccttgaagttttttta
acttgttcttagcatttttgtcatcgaagccttatgttcttatatagttt
tttcttataaaaaacgtgtaaattgtTCCAAAGAAAAGCATTCTGCAAGA
TTTTTGGTATTCACATGGGATTAGGCTTAAAGAATTAGATAGATTCTTTG
AGCTTTTCTAACCTCcgaattttttacaatattatgGTTTTTATAAACAG
GattatttaaagaattttttattcCAATTAACATTGTATATGTATTAGAT
TATTATAATTATATTGATAATAGCTGTAAGGGACCCTTTTGTTTAGTGTG
CTTATGCCATATTGTTTTTCTTGGTAAGATTTTCCATAGAGTGAGCTTTC
GTCTGTTTGTGCGATGGGAGCGTTTGTCACCttttataaatttgaaattt
tcagtgtcTTAAAGATATCTCTGGATACTCTTTCCCCCCAAGCAATTGAT
CGTATTTCTTTTATCGTTTTAGGCTTAACATACAAATGAACTCAAAAATG
AATAATAAAACGAcgaaaataaataaagaaaatgtgacCAATGAAAACGA
AGGAGATATGACCACGCCCTACATCAGCCTTAATGGTTTACTATTGAAAC
CCAAACAAAAGTCAAGCACCCCACATCACGCTTCTCTTAACCGAGCTTTT
GCAGAACGCCTTAGACTATTGTTATCTGATGGGAAACAAAGCATGGGGAC
TTCAGATGTCCGATACCCATCCAATGTTCCTCGTAAAGCTAATCTACTTC
CTCCAACAATGGcgagaaatattataatcaatAACCCAAAGAAATCGGTT
cctgaaaagttaaaaacatttggaAGCGTACAGAATGTGGCTCGATATCA
ACCAATAACCATCACCCGAAAGGACCAACTATCTTCTGAAACCAGTAACT
TGTTGATTGAAACACCAAAGAAATTGGTCACTGGACAGTTAGGGACACCT
CAAAACCAGGCTCAATCTCCCAGGATTGTCTCCCAAAAAGAGAATCTATC
ACCTACTGGTGTGACAAATGCTTTGGTTGAAAAGTTCAAAAGAAGCTCTA
TCCCTGAAGAATTAAGAATATTAGAAAGgaaccaaaacgaggctgaaaac
aCTGTTAATACTTCTTGTAAAGCAAAACTACTTCCTTATACGGCTTGTAA
TATACAAGACAAAACAAAAAGGAAATCGGTCTCCGGAGAATTGACTCTCC
GAAACGTCCGCAATGAGACTGCTCAACATATTTGTAATGTCAACCGAGAG
GACTTCATCAGAACgagtaaaattttgattgaGAAATCAGATATGAATGT
AATCACTGACCAGGTATCAACGAATCAACACACCATTGAAAACAAAGACG
ATTTGTATTTTGATCCAACTGGTTTTGGAGATTCAGTTAATCTTTGGGGA
TTTGTTGGTGATTGCAGAGAATCTGACTCCAAACATTTAGAATCTCAGAA
TGAAACATTTGTCGATCCAAATATGGAAATTAAAATTGAACTCGATCTTG
ATTCTGAAATGGAACCTCTGATTAACGACATTGACTCGgttcgggaggct
gaaaacatTAACAACgatgattgttttgattctgaAATGGAACCACTGGT
AAACGACATTGACTCGATTCAGGAGGCTGAAAACATTAACAACAATGCAG
GCTTCGATAAACTCAAACAAGGTGAAAATGAATTTATTACGAAGCCAAAT
CTGGATATGAAGGCTGAATTAATCCCTGGTGTCAAAAGCCGAGAGGGTGA
AAACATCAGCAGTAAGACTAGCATCGTTAAACGACTCCAAAGTGACTGTC
AAACTTATGAATATGGTATAATTCCTGGCAGTGATATTTGGAATGTGGAC
GAGGATAGAGAATTTGTTACTTCGGATATTGGCAATATTATGATAATCCC
AAACGATGAGAATATAGATTCTAGAGGAACTGTTACCATCTCTCAACAGG
TTGACTTTAGTGGTGGATATCCCGACCATGTAATCTTCCCCAATGATACT
AACGATAAAGGAAATTCAGATCAAAACTCCTTTAATACTGAAATTCAAGT
AGTTCCCATTCCACCACGTAGGGTTCCGAAACAAAGGGAATTGATGGAGT
GCGATGTTTGTGGGATGAAATTTGCAATCAAAGAACTGTTGAAAAACCAT
AAAAAGCTACATCAAAACACTGAACCGTTCGGCTGTAAGGATTGTGGTaa
actatttaaaaaagaaatcaatttgACAAAACATATCAACTCTGTTCACA
AGAATCGAATTCAATGTGATGTTTGTGGGCAGTCAATGTCGTCATTGGGC
TACTTGAAGAGACATCAAATTATTCACATATCTGTTGAGTGTAAAGTTTG
TGGTAAATTGTGTGCAAATCAATTTAAGCTTAAGGAACATCAAGTTATTC
ATAATGCGAAAGCTTTTCAATGTGATGTTTGTGGGAATTCTTTTACACAA
AAAGCTTATTTATCCAAACATAAAGATATGGTTCACAAAGGTATAAAACC
TTTCAAGTGTAATGCGTGTGGGAAGTATTTTGCACAAAGAGGTGATCTTC
GAGTTCACATTGCTGCTAAACATAAGCAAGAGAAAGATTTTAAGTGTTAT
GAATGTGGTAAAATGTTTCCATTAAAAAGGTATTTGAAATGTCACATGGA
GAGAATACACGAAGGGGTTgcacaaagaagaaaaagaaggaatTTATCGT
CAGTAACTGTACTCCCAAAACACCCGCTAAACCAAGACTTTTCTAATTCA
GGAGCAAACCCTTAAAAAATAAGTACTTCAAAAAGTATGGAATTGACGAA
TTTTTGCTTTTTCATAGAAAGTTGTTTTCCAAGCTTTGTCATtctgatgt
tttgttttttcacgTCAATTCTGTCAACAgcttaaagctttttaaaagcG
ATTATTTTATGAAATGTTTTAGTGACACAAAAAAACTACCGAtcctcttt
ttgattttttttccttgGAATTCTTTAAATTGTTCATTCTAGTTCAGTTT
ATAATTTCGTTTGAATCTATCATAGCaggggggggtgaagcagttagtac
aagacatcatgccggttagtaccgtggtggtgtgccatatgaattggata
aaatcacttagtactcagatgtactaactgcaaaaaagggtggtcccctg
ctaaaaatttgccaaattttggtactaattgtgtaaaaaataggattttg
tgagaaaattaaaaaaaaaagaccatattttaccaaaaaaattttttggg
aagtagatttttt

Coding sequence (CDS) from alignment at sc0000077:115423..129235+

>TCONS_00007448 ID=TCONS_00007448|Name=TCONS_00007448|organism=Clytia hemisphaerica|type=CDS|length=4404bp|location=Sequence derived from alignment at sc0000077:115423..129235+ (Clytia hemisphaerica)
ATGAACTCAAAAATGAATAATAAAACGAcgaaaataaataaagaaaatgt
gacCAATGAAAACGAAGGAGATATGACCACGCCCTACATCAGCCTTAATG
GTTTACTATTGAAACCCAAACAAAAGTCAAGCACCCCACATCACGCTTCT
CTTAACCGAGCTTTTGCAGAACGCCTTAGACTATTGTTATCTGATGGGAA
ACAAAGCATGGGGACTTCAGATGTCCGATACCCATCCAATGTTCCTCGTA
AAGCTAATCTACTTCCTCCAACAATGGcgagaaatattataatcaatAAC
CCAAAGAAATCGGTTcctgaaaagttaaaaacatttggaAGCGTACAGAA
TGTGGCTCGATATCAACCAATAACCATCACCCGAAAGGACCAACTATCTT
CTGAAACCAGTAACTTGTTGATTGAAACACCAAAGAAATTGGTCACTGGA
CAGTTAGGGACACCTCAAAACCAGGCTCAATCTCCCAGGATTGTCTCCCA
AAAAGAGAATCTATCACCTACTGGTGTGACAAATGCTTTGGTTGAAAAGT
TCAAAAGAAGCTCTATCCCTGAAGAATTAAGAATATTAGAAAGgaaccaa
aacgaggctgaaaacaCTGTTAATACTTCTTGTAAAGCAAAACTACTTCC
TTATACGGCTTGTAATATACAAGACAAAACAAAAAGGAAATCGGTCTCCG
GAGAATTGACTCTCCGAAACGTCCGCAATGAGACTGCTCAACATATTTGT
AATGTCAACCGAGAGGACTTCATCAGAACgagtaaaattttgattgaGAA
ATCAGATATGAATGTAATCACTGACCAGGTATCAACGAATCAACACACCA
TTGAAAACAAAGACGATTTGTATTTTGATCCAACTGGTTTTGGAGATTCA
GTTAATCTTTGGGGATTTGTTGGTGATTGCAGAGAATCTGACTCCAAACA
TTTAGAATCTCAGAATGAAACATTTGTCGATCCAAATATGGAAATTAAAA
TTGAACTCGATCTTGATTCTGAAATGGAACCTCTGATTAACGACATTGAC
TCGATTCAGGAGGCTGAAAACATTAACAACAATGCAGGCTTCGATAAACT
CAAACAAGGTGAAAATGAATTTATTACGAAGCCAAATCTGGATATGAAGG
CTGAATTAATCCCTGGTGTCAAAAGCCGAGAGGGTGAAAACATCAGCAGT
AAGACTAGCATCGTTAAACGACTCCAAAGTGACTGTCAAACTTATGAATA
TGGTATAATTCCTGGCAGTGATATTTGGAATGTGGACGAGGATAGAGAAT
TTGTTACTTCGGATATTGGCAATATTATGATAATCCCAAACGATGAGAAT
ATAGATTCTAGAGGAACTGTTACCATCTCTCAACAGGTTGACTTTAGTGG
TGGATATCCCGACCATGTAATCTTCCCCAATGATACTAACGATAAAGGAA
ATTCAGATCAAAACTCCTTTAATACTGAAATTCAAGTAGTTCCCATTCCA
CCACGTAGGGTTCCGAAACAAAGGGAATTGATGGAGTGCGATGTTTGTGG
GATGAAATTTGCAATCAAAGAACTGTTGAAAAACCATAAAAAGCTACATC
AAAACACTGAACCGTTCGGCTGTAAGGATTGTGGTaaactatttaaaaaa
gaaatcaatttgACAAAACATATCAACTCTGTTCACAAGAATCGAATTCA
ATGTGATGTTTGTGGGCAGTCAATGTCGTCATTGGGCTACTTGAAGAGAC
ATCAAATTATTCACATATCTGTTGAGTGTAAAGTTTGTGGTAAATTGTGT
GCAAATCAATTTAAGCTTAAGGAACATCAAGTTATTCATAATGCGAAAGC
TTTTCAATGTGATGTTTGTGGGAATTCTTTTACACAAAAAGCTTATTTAT
CCAAACATAAAGATATGGTTCACAAAGGTATAAAACCTTTCAAGTGTAAT
GCGTGTGGGAAGTATTTTGCACAAAGAGGTGATCTTCGAGTTCACATTGC
TGCTAAACATAAGCAAGAGAAAGATTTTAAGTGTTATGAATGTGGTAAAA
TGTTTCCATTAAAAAGGTATTTGAAATGTCACATGGAGAGAATACACGAA
GGGGTTgcacaaagaagaaaaagaaggaatTTATCGTCAGTAACTGTACT
CCCAAAACACCCGCTAAACCAAGACTTTTCTAATTCAGGAGCAAACCCTT
AAATGAACTCAAAAATGAATAATAAAACGAcgaaaataaataaagaaaat
gtgacCAATGAAAACGAAGGAGATATGACCACGCCCTACATCAGCCTTAA
TGGTTTACTATTGAAACCCAAACAAAAGTCAAGCACCCCACATCACGCTT
CTCTTAACCGAGCTTTTGCAGAACGCCTTAGACTATTGTTATCTGATGGG
AAACAAAGCATGGGGACTTCAGATGTCCGATACCCATCCAATGTTCCTCG
TAAAGCTAATCTACTTCCTCCAACAATGGcgagaaatattataatcaatA
ACCCAAAGAAATCGGTTcctgaaaagttaaaaacatttggaAGCGTACAG
AATGTGGCTCGATATCAACCAATAACCATCACCCGAAAGGACCAACTATC
TTCTGAAACCAGTAACTTGTTGATTGAAACACCAAAGAAATTGGTCACTG
GACAGTTAGGGACACCTCAAAACCAGGCTCAATCTCCCAGGATTGTCTCC
CAAAAAGAGAATCTATCACCTACTGGTGTGACAAATGCTTTGGTTGAAAA
GTTCAAAAGAAGCTCTATCCCTGAAGAATTAAGAATATTAGAAAGgaacc
aaaacgaggctgaaaacaCTGTTAATACTTCTTGTAAAGCAAAACTACTT
CCTTATACGGCTTGTAATATACAAGACAAAACAAAAAGGAAATCGGTCTC
CGGAGAATTGACTCTCCGAAACGTCCGCAATGAGACTGCTCAACATATTT
GTAATGTCAACCGAGAGGACTTCATCAGAACgagtaaaattttgattgaG
AAATCAGATATGAATGTAATCACTGACCAGGTATCAACGAATCAACACAC
CATTGAAAACAAAGACGATTTGTATTTTGATCCAACTGGTTTTGGAGATT
CAGTTAATCTTTGGGGATTTGTTGGTGATTGCAGAGAATCTGACTCCAAA
CATTTAGAATCTCAGAATGAAACATTTGTCGATCCAAATATGGAAATTAA
AATTGAACTCGATCTTGATTCTGAAATGGAACCTCTGATTAACGACATTG
ACTCGATTCAGGAGGCTGAAAACATTAACAACAATGCAGGCTTCGATAAA
CTCAAACAAGGTGAAAATGAATTTATTACGAAGCCAAATCTGGATATGAA
GGCTGAATTAATCCCTGGTGTCAAAAGCCGAGAGGGTGAAAACATCAGCA
GTAAGACTAGCATCGTTAAACGACTCCAAAGTGACTGTCAAACTTATGAA
TATGGTATAATTCCTGGCAGTGATATTTGGAATGTGGACGAGGATAGAGA
ATTTGTTACTTCGGATATTGGCAATATTATGATAATCCCAAACGATGAGA
ATATAGATTCTAGAGGAACTGTTACCATCTCTCAACAGGTTGACTTTAGT
GGTGGATATCCCGACCATGTAATCTTCCCCAATGATACTAACGATAAAGG
AAATTCAGATCAAAACTCCTTTAATACTGAAATTCAAGTAGTTCCCATTC
CACCACGTAGGGTTCCGAAACAAAGGGAATTGATGGAGTGCGATGTTTGT
GGGATGAAATTTGCAATCAAAGAACTGTTGAAAAACCATAAAAAGCTACA
TCAAAACACTGAACCGTTCGGCTGTAAGGATTGTGGTaaactatttaaaa
aagaaatcaatttgACAAAACATATCAACTCTGTTCACAAGAATCGAATT
CAATGTGATGTTTGTGGGCAGTCAATGTCGTCATTGGGCTACTTGAAGAG
ACATCAAATTATTCACATATCTGTTGAGTGTAAAGTTTGTGGTAAATTGT
GTGCAAATCAATTTAAGCTTAAGGAACATCAAGTTATTCATAATGCGAAA
GCTTTTCAATGTGATGTTTGTGGGAATTCTTTTACACAAAAAGCTTATTT
ATCCAAACATAAAGATATGGTTCACAAAGGTATAAAACCTTTCAAGTGTA
ATGCGTGTGGGAAGTATTTTGCACAAAGAGGTGATCTTCGAGTTCACATT
GCTGCTAAACATAAGCAAGAGAAAGATTTTAAGTGTTATGAATGTGGTAA
AATGTTTCCATTAAAAAGGTATTTGAAATGTCACATGGAGAGAATACACG
AAGGGGTTgcacaaagaagaaaaagaaggaatTTATCGTCAGTAACTGTA
CTCCCAAAACACCCGCTAAACCAAGACTTTTCTAATTCAGGAGCAAACCC
TTAA
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_004202XLOC_004202Clytia hemisphaericagene
The following polypeptide feature(s) derives from this transcript:
Feature NameUnique NameSpeciesType
TCONS_00007448-proteinTCONS_00007448-proteinClytia hemisphaericapolypeptide
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00007448-exon-sc0000077-1491911889:115423..115640TCONS_00007448-exon-sc0000077-1491911889:115423..115640Clytia hemisphaericaexon
TCONS_00007448-exon-sc0000077-1510915933:115423..115640TCONS_00007448-exon-sc0000077-1510915933:115423..115640Clytia hemisphaericaexon
TCONS_00007448-exon-sc0000077-1575043694:115423..115640TCONS_00007448-exon-sc0000077-1575043694:115423..115640Clytia hemisphaericaexon
TCONS_00007448-exon-sc0000077-1491911889:116563..116753TCONS_00007448-exon-sc0000077-1491911889:116563..116753Clytia hemisphaericaexon
TCONS_00007448-exon-sc0000077-1510915933:116563..116753TCONS_00007448-exon-sc0000077-1510915933:116563..116753Clytia hemisphaericaexon
TCONS_00007448-exon-sc0000077-1575043694:116563..116753TCONS_00007448-exon-sc0000077-1575043694:116563..116753Clytia hemisphaericaexon
TCONS_00007448-exon-sc0000077-1491911889:122151..122363TCONS_00007448-exon-sc0000077-1491911889:122151..122363Clytia hemisphaericaexon
TCONS_00007448-exon-sc0000077-1510915933:122151..122363TCONS_00007448-exon-sc0000077-1510915933:122151..122363Clytia hemisphaericaexon
TCONS_00007448-exon-sc0000077-1575043694:122151..122363TCONS_00007448-exon-sc0000077-1575043694:122151..122363Clytia hemisphaericaexon
TCONS_00007448-exon-sc0000077-1491911889:123912..124090TCONS_00007448-exon-sc0000077-1491911889:123912..124090Clytia hemisphaericaexon
TCONS_00007448-exon-sc0000077-1510915933:123912..124090TCONS_00007448-exon-sc0000077-1510915933:123912..124090Clytia hemisphaericaexon
TCONS_00007448-exon-sc0000077-1575043694:123912..124090TCONS_00007448-exon-sc0000077-1575043694:123912..124090Clytia hemisphaericaexon
TCONS_00007448-exon-sc0000077-1491911889:125485..127501TCONS_00007448-exon-sc0000077-1491911889:125485..127501Clytia hemisphaericaexon
TCONS_00007448-exon-sc0000077-1510915933:125485..127501TCONS_00007448-exon-sc0000077-1510915933:125485..127501Clytia hemisphaericaexon
TCONS_00007448-exon-sc0000077-1575043694:125485..127501TCONS_00007448-exon-sc0000077-1575043694:125485..127501Clytia hemisphaericaexon
TCONS_00007448-exon-sc0000077-1491911889:127580..129235TCONS_00007448-exon-sc0000077-1491911889:127580..129235Clytia hemisphaericaexon
TCONS_00007448-exon-sc0000077-1510915933:127580..129235TCONS_00007448-exon-sc0000077-1510915933:127580..129235Clytia hemisphaericaexon
TCONS_00007448-exon-sc0000077-1575043694:127580..129235TCONS_00007448-exon-sc0000077-1575043694:127580..129235Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000077supercontigsc0000077:115423..129235 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
Sort Descending | Sort Ascending | Only Non-Zero Values | Tile/Chart | Reset | Show/Hide Values

Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
4.99108	4.40449	2.17943	2.05543	2.02285	1.98778	3.18699	3.33422	2.51905	2.68094	3.16303	2.96998	1.755	2.35917	2.33776	2.75561	1.9888	2.54826	1.24666	1.16062	1.33465	1.42417	7.25594	6.58293	3.3274	4.13303	1.54821	1.53593	4.94407	5.36343
Annotated Terms
The following terms have been associated with this transcript:
Vocabulary: INTERPRO
TermDefinition
IPR013087Znf_C2H2_type
IPR013083Znf_RING/FYVE/PHD
Vocabulary: Molecular Function
TermDefinition
GO:0003676nucleic acid binding
GO Annotation
GO Assignments
This transcript is annotated with the following GO terms.
Category Term Accession Term Name
molecular_function GO:0003676 nucleic acid binding
Blast
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BLAST of TCONS_00007448 vs. Swiss-Prot (Human)
Match: METL9 (Methyltransferase-like protein 9 OS=Homo sapiens GN=METTL9 PE=2 SV=1)

HSP 1 Score: 237.269 bits (604), Expect = 8.484e-69
Identity = 126/268 (47.01%), Postives = 180/268 (67.16%), Query Frame = 3 
Query:  207 DTDKWYYLNSEQFPAHLQSKFLQNSLDEETEEFLENCYEKSDWIFTQIFHNVFRVVLGWFMSMTTVNGLLNRGSMFVFSENQFLELLNVNSSSYHGNSYLDLGAGDGKTTGKLIKYFDQSYATEQSPTMQWRLKEKGFQILEIDQWQ-TPNKYSLITALNLLDRIDHPVKLVNELRTSIS-DDGFVILAIVLPYNPCYE-TGVSFRDPSQYLPICGKTIEEQILSLHDDVFVPAGFDVVRFTRLPYLCEGDLNHDFFALNDVVFVLKP 1001
            +  +WY  N E+    LQ+ F+Q+ LD+ T+ FL N  EKS W+F Q++H+    V   FMS T++NGLL RGSMFVFS +QF  LL +N   +  +  LDLGAGDG+ T  +  +F++ YATE S TM W+L++K +++L I++WQ T  +Y +I+ LNLLDR D P+ L+ ++R+ +    G VILA+VLP++P  E  G  +  PS+ L I G+  EEQ+ SL  +VF  AGF +  FTRLPYLCEGD+ +D++ L+D VFVLKP
Sbjct:   52 ENHQWYVCNREKLCESLQAVFVQSYLDQGTQIFLNNSIEKSGWLFIQLYHSFVSSVFSLFMSRTSINGLLGRGSMFVFSPDQFQRLLKIN-PDWKTHRLLDLGAGDGEVTKIMSPHFEEIYATELSETMIWQLQKKKYRVLGINEWQNTGFQYDVISCLNLLDRCDQPLTLLKDIRSVLEPTRGRVILALVLPFHPYVENVGGKWEKPSEILEIKGQNWEEQVNSL-PEVFRKAGFVIEAFTRLPYLCEGDMYNDYYVLDDAVFVLKP 317
The following BLAST results are available for this feature:
BLAST of TCONS_00007448 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
METL98.484e-6947.01Methyltransferase-like protein 9 OS=Homo sapiens G... [more]
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