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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00007429 ID=TCONS_00007429|Name=TCONS_00007429|organism=Clytia hemisphaerica|type=transcript|length=820bp
GCGGTGCTTTACAATAAATTCGAAAATTCTTCCCtaataaaaaatcataa
taCTTCAAATCAAATAGTGTCGCTTCTACGAAAAGACGAAGAAACGCTCG
TATTATTTTTCAAGTTTAATTCATACTCAGTGCTCTGCAGTTTGTAAAAT
TTCTTTCGATAATAATGTCTGAATTCTTTCACATGTACCCAATACACGAA
TACATTAACTATAGTattgatgaaaatcaaattatcCATAATGGCCAAAA
TTTCATCAGGAAATtggatttgaaaatttgataccAAGGTTGCCATAAAA
AGTGTAGAAACTGTtactaagaaaatatttggtatAAAAACGAATATAGA
TGAAATGATTGTTAAACACTTGATTGTTTTGGATGCTTTCAAATGCCGTT
GAAATGCAGCTTGTTGCTTGATGGTTGGGTTTTCTTTGCATTGCTTTTTG
AGGGATTTAAAAATCTTGACGTTGAAGAATAATATCAGAGATATGGGAAC
AACACAGGAGAAAAGAAAATGGATTATACTGGCTGCTAAAACAGTTTCAT
TGGCTAAATCTTTCGTTATAACAAGACAAACTTTGATACTCTTATCGACC
AGTTTACCTCGACCGGCATAAGGAGCAAAAATGAAAACTCCAATGGATAC
AGAAATTCCAAATATAACATTCACAACCCATTTTGATAATTTGTTAGCGA
ATGGTTTCGTAATTTTACGATACCGATCGTATGAAACTCCACAAAGAATC
ATAATTGAAGTAGTTGAAAAAGCTGTTGGCAGTAACCATATATCTTTACA
AATGAATATGGCTAACGTTG Run BLAST on NCBI protein sequence of TCONS_00007429-protein >TCONS_00007429-protein ID=TCONS_00007429-protein|Name=TCONS_00007429-protein|organism=Clytia hemisphaerica|type=polypeptide|length=252bp
TLAIFICKDIWLLPTAFSTTSIMILCGVSYDRYRKITKPFANKLSKWVVN
VIFGISVSIGVFIFAPYAGRGKLVDKSIKVCLVITKDLANETVLAASIIH
FLFSCVVPISLILFFNVKIFKSLKKQCKENPTIKQQAAFQRHLKASKTIK
CLTIISSIFVFIPNIFLVTVSTLFMATLVSNFQIQFPDEILAIMDNLIFI
NTIVNVFVYWVHVKEFRHYYRKKFYKLQSTEYELNLKNNTSVSSSFRRSD
TI Run BLAST on NCBI transcript from alignment at sc0000076:489499..490318 Legend: exonfive_prime_UTRCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00007429 ID=TCONS_00007429|Name=TCONS_00007429|organism=Clytia hemisphaerica|type=transcript|length=820bp|location=Sequence derived from alignment at sc0000076:489499..490318 (Clytia hemisphaerica)
CAACGTTAGCCATATTCATTTGTAAAGATATATGGTTACTGCCAACAGCT
TTTTCAACTACTTCAATTATGATTCTTTGTGGAGTTTCATACGATCGGTA
TCGTAAAATTACGAAACCATTCGCTAACAAATTATCAAAATGGGTTGTGA
ATGTTATATTTGGAATTTCTGTATCCATTGGAGTTTTCATTTTTGCTCCT
TATGCCGGTCGAGGTAAACTGGTCGATAAGAGTATCAAAGTTTGTCTTGT
TATAACGAAAGATTTAGCCAATGAAACTGTTTTAGCAGCCAGTATAATCC
ATTTTCTTTTCTCCTGTGTTGTTCCCATATCTCTGATATTATTCTTCAAC
GTCAAGATTTTTAAATCCCTCAAAAAGCAATGCAAAGAAAACCCAACCAT
CAAGCAACAAGCTGCATTTCAACGGCATTTGAAAGCATCCAAAACAATCA
AGTGTTTAACAATCATTTCATCTATATTCGTTTTTataccaaatattttc
ttagtaACAGTTTCTACACTTTTTATGGCAACCTTggtatcaaattttca
aatccaATTTCCTGATGAAATTTTGGCCATTATGgataatttgattttca
tcaatACTATAGTTAATGTATTCGTGTATTGGGTACATGTGAAAGAATTC
AGACATTATTATCGAAAGAAATTTTACAAACTGCAGAGCACTGAGTATGA
ATTAAACTTGAAAAATAATACGAGCGTTTCTTCGTCTTTTCGTAGAAGCG
ACACTATTTGATTTGAAGtattatgattttttattaGGGAAGAATTTTCG
AATTTATTGTAAAGCACCGC Coding sequence (CDS) from alignment at sc0000076:489499..490318 >TCONS_00007429 ID=TCONS_00007429|Name=TCONS_00007429|organism=Clytia hemisphaerica|type=CDS|length=759bp|location=Sequence derived from alignment at sc0000076:489499..490318 (Clytia hemisphaerica)
ACGTTAGCCATATTCATTTGTAAAGATATATGGTTACTGCCAACAGCTTT
TTCAACTACTTCAATTATGATTCTTTGTGGAGTTTCATACGATCGGTATC
GTAAAATTACGAAACCATTCGCTAACAAATTATCAAAATGGGTTGTGAAT
GTTATATTTGGAATTTCTGTATCCATTGGAGTTTTCATTTTTGCTCCTTA
TGCCGGTCGAGGTAAACTGGTCGATAAGAGTATCAAAGTTTGTCTTGTTA
TAACGAAAGATTTAGCCAATGAAACTGTTTTAGCAGCCAGTATAATCCAT
TTTCTTTTCTCCTGTGTTGTTCCCATATCTCTGATATTATTCTTCAACGT
CAAGATTTTTAAATCCCTCAAAAAGCAATGCAAAGAAAACCCAACCATCA
AGCAACAAGCTGCATTTCAACGGCATTTGAAAGCATCCAAAACAATCAAG
TGTTTAACAATCATTTCATCTATATTCGTTTTTataccaaatattttctt
agtaACAGTTTCTACACTTTTTATGGCAACCTTggtatcaaattttcaaa
tccaATTTCCTGATGAAATTTTGGCCATTATGgataatttgattttcatc
aatACTATAGTTAATGTATTCGTGTATTGGGTACATGTGAAAGAATTCAG
ACATTATTATCGAAAGAAATTTTACAAACTGCAGAGCACTGAGTATGAAT
TAAACTTGAAAAATAATACGAGCGTTTCTTCGTCTTTTCGTAGAAGCGAC
ACTATTTGA
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this transcript:
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00007429-exon-sc0000076-1491911889:489499..490318 | TCONS_00007429-exon-sc0000076-1491911889:489499..490318 | Clytia hemisphaerica | exon |
| TCONS_00007429-exon-sc0000076-1510915933:489499..490318 | TCONS_00007429-exon-sc0000076-1510915933:489499..490318 | Clytia hemisphaerica | exon |
| TCONS_00007429-exon-sc0000076-1575043694:489499..490318 | TCONS_00007429-exon-sc0000076-1575043694:489499..490318 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000076 | supercontig | sc0000076:489499..490318 . |
Annotated Terms
The following terms have been associated with this transcript:
Vocabulary: Biological Process
| Term | Definition |
|---|
| GO:0007186 | G-protein coupled receptor signaling pathway |
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0004930 | G-protein coupled receptor activity |
Vocabulary: Cellular Component
| Term | Definition |
|---|
| GO:0016021 | integral component of membrane |
GO Annotation
GO Assignments
This transcript is annotated with the following GO terms.
| Category |
Term Accession |
Term Name |
| biological_process |
GO:0007186 |
G-protein coupled receptor signaling pathway |
| cellular_component |
GO:0016021 |
integral component of membrane |
| molecular_function |
GO:0004930 |
G-protein coupled receptor activity |
Blast
The following BLAST results are available for this feature:
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