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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00007395 ID=TCONS_00007395|Name=TCONS_00007395|organism=Clytia hemisphaerica|type=transcript|length=323bp
AGTACAGTGACTGTCTTGTGCCTTTTCGTTGTTTAGCCGTTTTGTCATAT
GATATTCCTTAATTCATTTCAAATCAGATGTCATGATGTCTTCATCGATT
CATGTGCGGAGGATTTCtgatattttaatttaaaatttttatatctAGAG
CACGTTTGAAACACCACACAAAAATGGCATTTGACATCAAACTTTACAAT
GTTGTTATGCTAGGAATTTGTTTTATGTTAATATTCACAGCTTTTCAGAC
AAGTGGTAATGTACAGactTCAGTGTTGAACAGCTACAAAACAAGCAGTG
GTGAATATCCCTTTAAAAGTAAG Run BLAST on NCBI transcript from alignment at sc0000076:93248..96814- Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00007395 ID=TCONS_00007395|Name=TCONS_00007395|organism=Clytia hemisphaerica|type=transcript|length=3567bp|location=Sequence derived from alignment at sc0000076:93248..96814- (Clytia hemisphaerica)
AGTACAGTGACTGTCTTGTGCCTTTTCGTTGTTTAGCCGTTTTGTCATAT
GATATTCCTTAATTCATTTCAAATCAGATGTCATGATGTCTTCATCGATT
CATGTGCGGAGGATTTCTGATATTTTAATTTAAAATTTTTATATCTAGAG
CACGTTTGAAACACCACACAAAAATGGCATTTGACATCAAACTTTACAAT
GTTGTTATGCTAGGAATTTGTTTTATGTTAATATTCACAGCTTTTCAGAC
AAGTGGTAATGTACAGGTAATATTGTAGTTTAATTTTTGTTCAAAATTCT
AAAATAAAAAGTTCTAGGAGACATTTCTATAATAAAAAAATAATAACGTT
TTTTTACAGTAGATAAATAATAAAGCTTTACAGGTTTGCAGGCCACGAAG
ACACATGGGCCTCTATAAACCACTCGTACTTTTTACAATAATCTTTTTGA
AATAGAGTTTTTTTCGCGGGCTCCCCCGGACTTTCCATTTAGTGTTGTCC
CCTTTGATTTTAGCATTCATTTTTTCGGCTTCCTTACACTGCCATTATTC
TTTGATTATTTGTCTTTCATTTTTGGTCAAATCCTCTGTCACTCGGTAAG
GAAAGCCTTTTGCTTTTGTTATTGCTTGCAACACTGTGTTCTTGTCCTCT
TCGTTCGTAAATGTAACTTTGATTGGTCTGTATCTCGCTTTATCTTCTCT
TTCTTTCGTAAATTTCCCGATCCGCTGCGTCTCGGTAGTCTTTATATTCT
TCAGATGGAGCCGCCAACCAATAATTTTGTCGTGGATAAATTCTTCGTCC
TTGATTTTCGTTTCTTCTTCAGACTCATCTGTCGATTCATCTATCCCATG
AAAAATTAGGTTAAGTGCTGTCGATCGAATCAGCTGCTCCTGCTGCTTTT
TTTTTTCGAATTGCATCTCCAATGTTTTTCTCGATGTGTTTGGATGTGAT
TTTAGCGTAGCCCATTGGTGGTCTTTCCTCTTCTTTCTTTTCGATGATGT
TTTCAATCTTCTTTTTAAGTGTGGTTATTCTGGTGTCGATAGTTTCTTTC
ATTTCGTTGACCATAACATTGACGTCCTGTGCTTTCAAATGGTTTATTTC
TTCGTCCTGCCTTTTCATTATANNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNATCTTTTGGTGCGTTTTCTTCATTTA
TGATGCACTTTGACGGGCTGCAAAAGTCGTTTATTGATGGTGATTTTTGA
TTATTTTCCTGGATTTTTTCCGCCATCTTTGTGCAAAATAGATATTTATA
TTTATTCTTTCCTTTCAACACCTATATGTATTCACTTTCAGGAGGCAAGG
GCACTTACAGTATAGCCCTAATTCCTCATGCAAAATTTATGGGAAATACA
TATTTAACTTTGTAACCAATGCTCCACACAAAGTACTTGAGCTAAAGTCC
CAAAAAATTGGGATAAAAATCAGTTTATTGAAGTTTGCAAAAAAAAAACG
CCACATAGAAGATGTTTCAAATTCAGAATTTAGATAGAGCAGTAAAAAAT
ACAACTTTATTCATTTTATGGCAGTGGTCAACCTTTTCTTATTTTTGACA
ATTCTCAAGAAGGTGGTGGAAATTAGAAAAATTTTCATTTCTTTGTCTAT
TTTTTAAAAATTGACAAAGAATTAAAAAATTTTCTAATTTGTAATTAATA
ATCAATTTTGCCACTTTTCATAGTGAAAATGTGAAAAATTTTAGATTTGT
TGTTCTGACATGGTCCCAAATTTATCAAACCTTCTAATCTGATATGGTCC
ACTTTTCAAACTCCAACAGCACATCCCTGTCGATCAAACTCAGTTATTCT
CTGGCAAGAAAACTTAATCGTACCGTGAGTGGTCCTAAATCCGACAGCCC
TTTCAAAAATACAAACTAAAATAAAAACAAACCTTTCGCTGTGACGCAAT
GAAGATATTAAAGTGTCAACTCAACTGAGAGATTTGATACACTGAACCAA
TTGAACCAAATAACAATAATTGCTTCTTATACAAAACATAATTTTTTATT
ACAAAATTGTTAACGTTTTAAACAGGAGCAATGGATTCAGAATAATAGAG
GTAATTATTTTTACAACTCCCACTTTTTTAAACACATTAATTGACATCTT
GACATTATAGTCATCTTGTTAGATGTTTTGTTTCAAAAGTTCTTGCAATA
GTTTATTGTTCAACTTGGAGAAGGAATGTTTGTACACATAGGATTTTTTT
CATAGCAGTTATTTGGGGGGTCGGATTTAGGCAGGGCTGTCGGATTTAGG
ACCACTCACAGTACTCAAGGGCGGCGCAAATGAATCCAACATTTGATCCA
ACATTTCAAATTCATTGTTGGACGAAATGTTGGACGAAAAGTCAGGTGGA
AAAATTCGAAAAGTTGCATGGAAAGTCATTTGCGCAAAAACGTCAAACAT
TTTCATCCAACAGCAACATGATTACGCAAATGCACCCAACATTGAAACCA
ACATAAAAGGGACGTCAATCTCAGTAAAATTGTTGCATGAAAATTTGACG
GCGATCAAACTTCATCCAACATGATTTCCAACAATTTTCTTAAAAAGTTG
CAATTTTATGACTTGTGCAAATGAACCCAACATTTGATCCAACAATGAAA
CGAATGGAAACAGTAAAAATGGTTAATGTAGCAACGTCAGTATAACCAAA
TCAGTCTTCTTATGGCTTTGAAAAAATAACAGTGGATAAAATATTTCGTA
CACAACAAATTCTTATTCGTTTCTTTCCTATCATAATGCTTTAATGTATG
ATACCGTGAGTGGTGAATATTTCAAACATATTTGTCAGTTTTTAGAATAT
CAATGAAATTGATACTGAAGATATGAGGAGTTAATTGGATAGTTATGCTA
ATTTTAAGGTTTACCTGTATTTTTTTACATGCTTGCACAAAAAAGTCAAA
AAACCTGAACTAGTGTGTGTATGATTGTAAGATTTGGTATACATGTTGCA
AATAAATCTAATAGGCTATAAATGAAACTCAGTGATATGCTCCCTGATAA
AAATAGGGTTAAGGTCTCCTTTACAACTAATTGAGAGTTTTTTTAGAAAG
TTAAAACTTTGTCAGTTCTCTGCCATATGCAAAAAATCAAGGCTAGACCT
CACTATCAATATATTGAAAGCTCAATGAGGTTATTTCATATTTCATAAAG
CTTGGTATATATACTTTATTTAAATGTCTTTCTAGAAAAATTGACATTGA
AAGGTTTCTCATTAGGTTTCCCAATATTGTATATATGTGTTTTTTCTTTT
CTTTTTTAAGACTTCAGTGTTGAACAGCTACAAAACAAGCAGTGGTGAAT
ATCCCTTTAAAAGTAAG
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00007395-exon-sc0000076-1575043694:96549..96814 | TCONS_00007395-exon-sc0000076-1575043694:96549..96814 | Clytia hemisphaerica | exon |
| TCONS_00007395-exon-sc0000076-1575043694:93248..93304 | TCONS_00007395-exon-sc0000076-1575043694:93248..93304 | Clytia hemisphaerica | exon |
| TCONS_00007395-exon-sc0000076-1510915933:96549..96814 | TCONS_00007395-exon-sc0000076-1510915933:96549..96814 | Clytia hemisphaerica | exon |
| TCONS_00007395-exon-sc0000076-1510915933:93248..93304 | TCONS_00007395-exon-sc0000076-1510915933:93248..93304 | Clytia hemisphaerica | exon |
| TCONS_00007395-exon-sc0000076-1491911889:96549..96814 | TCONS_00007395-exon-sc0000076-1491911889:96549..96814 | Clytia hemisphaerica | exon |
| TCONS_00007395-exon-sc0000076-1491911889:93248..93304 | TCONS_00007395-exon-sc0000076-1491911889:93248..93304 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000076 | supercontig | sc0000076:93248..96814 - |
Blast
The following BLAST results are available for this feature:
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