TCONS_00007374 (transcript) - C. hemisphaerica

Overview
NameTCONS_00007374
Unique NameTCONS_00007374
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length391

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00007374 ID=TCONS_00007374|Name=TCONS_00007374|organism=Clytia hemisphaerica|type=transcript|length=391bp
TCTCGGTTTCATTTATTCTAGCCGTCCAGATTTAGCAATGGAATGGATGA
TGAATCCTTTAAAAGCATTTCGTTATTTCCTTTGGGAACAATACAAATTC
TGCTTGGCCAAGTTTGTCGTCCTTGCTGTTATTGGTGCAATTATGGGGCT
GTTCTTCTACTCAATGCCGGTGAGTTATTGATTCTTTTTAGGGCTAGATC
ACTTAgccaaccaaaatctttgattacggggttatcttttgaaaatatgG
GTACTCTAATCGCAGCACAACTCAATCTTCGTATTGAccccacagatatc
taagcccgaagggctagataggcaactttaagctttctccagcaaaaaaa
agtgaagcaaaaatttgacttttaaaatttcgtgccgatgg
Run BLAST on NCBI

transcript from alignment at sc0000076:279875..280265+

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00007374 ID=TCONS_00007374|Name=TCONS_00007374|organism=Clytia hemisphaerica|type=transcript|length=391bp|location=Sequence derived from alignment at sc0000076:279875..280265+ (Clytia hemisphaerica)
TCTCGGTTTCATTTATTCTAGCCGTCCAGATTTAGCAATGGAATGGATGA
TGAATCCTTTAAAAGCATTTCGTTATTTCCTTTGGGAACAATACAAATTC
TGCTTGGCCAAGTTTGTCGTCCTTGCTGTTATTGGTGCAATTATGGGGCT
GTTCTTCTACTCAATGCCGGTGAGTTATTGATTCTTTTTAGGGCTAGATC
ACTTAgccaaccaaaatctttgattacggggttatcttttgaaaatatgG
GTACTCTAATCGCAGCACAACTCAATCTTCGTATTGAccccacagatatc
taagcccgaagggctagataggcaactttaagctttctccagcaaaaaaa
agtgaagcaaaaatttgacttttaaaatttcgtgccgatgg
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_004146XLOC_004146Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00007374-exon-sc0000076-1491911889:279875..280265TCONS_00007374-exon-sc0000076-1491911889:279875..280265Clytia hemisphaericaexon
TCONS_00007374-exon-sc0000076-1510915933:279875..280265TCONS_00007374-exon-sc0000076-1510915933:279875..280265Clytia hemisphaericaexon
TCONS_00007374-exon-sc0000076-1575043694:279875..280265TCONS_00007374-exon-sc0000076-1575043694:279875..280265Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000076supercontigsc0000076:279875..280265 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0.318265	0.852428	0	0.943663	0.269399	0.636663	0.259032	0.241883	0.475056	1.35311	0.635886	0.206834	1.62301	1.21507	0.358745	0.793802	0.227015	0	2.33609	2.11854	1.54429	0.648387	0.659846	0.451825	0.430133	0.189825	0.425881	0	0.752776	0.468628
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00007374 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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