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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00007361 ID=TCONS_00007361|Name=TCONS_00007361|organism=Clytia hemisphaerica|type=transcript|length=1806bp
ttttgggccaaaaattttttatatattttacacactgtAATTCTCTGTTG
CGTCGCCcgaattgagtagaattgagtagaattgagttgGTGACTCAGTG
ACTTTTTCTGTCCATGAggtttcttttaaattcaaaaattttattattgc
ctatTTGCTGcaagcgatttctagcgcattcgcggcattttgactttgtt
tatcattacatgcgccattcTGGGTcagaggtcacagtgttcaaaggtca
taatttgaaaacaCCAATAACACgtggttgttttggctgctgcgctggct
ggcagtttccttcaaaaatacgcTCCAAAAATGAATGATGGAGGTCTTAT
TTATAACggaaaacccgaaaatttttacagcCAACCAACCAATaccaacc
gactcacttttaAGACCCTACAAGGaagcgaaatgaagatatttgtgatt
gccaccTAAACCTTGCCCACcaccacgctaaagctctaaagggatggatG
AAAACAAACAATAAGAATATGCAATCTCATTTTCTTGATGTTGCATTGGT
CCATCGCCAAAAGTGGACTGAGAATGACAACACAATTAAGATATAGGACG
AAAATTACAGTACTAGCCTGGAAATGGTGCACAGTATGCAAAATATATTC
GACGAGAGGCAGTTATTACTTATTGGGTAATGGCGTAATGAGCAGATAAA
AAGTAAGAATTTGGAGTAAGTCAAACACCTGATTTCATTACGCCAGGTTT
AAACGCATCCACCTTAGAAGTACCAGTAACATATACAAACTATTCTTCTA
GCCTTTTTAATCGTAAAATTCGCCATTTTTTACCCTTTCTTACcatataa
atttgaattttttggtaTTAAACGGTTTTTGAAGCAGAAAAATTTATGAT
CTTAAATCTATGAACTTAACCTACTAAAACTTATGAAAGTATCTGACACA
ACTAATTActtgtcaatatattttgctGAATATCCTTCATATAGTAttta
aattacagtttgaacaatcAACAAGTGGAAATGTTGTTCTATTTATTGTC
ATTGTTGCTACCAATGTTGCATTGTAtcacaaaaaaagttgaacactgta
agtttaaatttctcaaattctaTGAGCTGTAACAAAATGAATCTTTTGGC
ATTAGAGaggagaaagaaaaaagtttttttcaggaCTTTTCTTTTCACAA
TAAAAGGtaatcattgatttattgaCTCATTGACTCAAACAAAGCAATTG
ATGTACCGGGTAGTTCACAAAAAACTTCGAATGTTTTGCAACGTTTTAAG
GGCTATCATAGTGATCTGTAAGCTGTAAGGTTTActtttactttactttt
ttttttaattggggagggtctaacttaaattttgatgtattacTTTTTAC
ATTTGGACAATCGGTTCAAGAGTTATGATCACTTaagtcaaaaatcaatt
ttcaaaaagtgcaaaaatacgtcaaaaaaggGTGATTCGATTTGCTTttc
cttctttcttttgttttagaatTGAACGTATATGCATTTTTACGATGAAA
TTAACTATCACATTGAGTATTAAAAGATACCAGAAGGTATTTAAACGTAA
CAttagttttttgtttaaataaaTCCTTGTGAATATTTTCTTCATTACAA
ACACAAAATCCTGCCAGTACAATCTTTAAAATTAAGACATGTCTATTTCA
GTTCCGTCTATTTCTAGTTGTTAATCTAATAACCCATTTTCGATCATTTC
cgctcattttgaaaataaattttattcggctagttcgaaacgtaagtcac
aggtca Run BLAST on NCBI transcript from alignment at sc0000075:720880..722685 Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00007361 ID=TCONS_00007361|Name=TCONS_00007361|organism=Clytia hemisphaerica|type=transcript|length=1806bp|location=Sequence derived from alignment at sc0000075:720880..722685 (Clytia hemisphaerica)
tgacctgtgacttacgtttcgaactagccgaataaaatttattttcaaaa
tgagcgGAAATGATCGAAAATGGGTTATTAGATTAACAACTAGAAATAGA
CGGAACTGAAATAGACATGTCTTAATTTTAAAGATTGTACTGGCAGGATT
TTGTGTTTGTAATGAAGAAAATATTCACAAGGAtttatttaaacaaaaaa
ctaaTGTTACGTTTAAATACCTTCTGGTATCTTTTAATACTCAATGTGAT
AGTTAATTTCATCGTAAAAATGCATATACGTTCAattctaaaacaaaaga
aagaaggaaAAGCAAATCGAATCACccttttttgacgtatttttgcactt
tttgaaaattgatttttgacttAAGTGATCATAACTCTTGAACCGATTGT
CCAAATGTAAAAAgtaatacatcaaaatttaagttagaccctccccaatt
aaaaaaaaaagtaaagtaaaagTAAACCTTACAGCTTACAGATCACTATG
ATAGCCCTTAAAACGTTGCAAAACATTCGAAGTTTTTTGTGAACTACCCG
GTACATCAATTGCTTTGTTTGAGTCAATGAGtcaataaatcaatgattaC
CTTTTATTGTGAAAAGAAAAGtcctgaaaaaaacttttttctttctcctC
TCTAATGCCAAAAGATTCATTTTGTTACAGCTCAtagaatttgagaaatt
taaacttacagtgttcaactttttttgtgaTACAATGCAACATTGGTAGC
AACAATGACAATAAATAGAACAACATTTCCACTTGTTgattgttcaaact
gtaatttaaaTACTATATGAAGGATATTCagcaaaatatattgacaagTA
ATTAGTTGTGTCAGATACTTTCATAAGTTTTAGTAGGTTAAGTTCATAGA
TTTAAGATCATAAATTTTTCTGCTTCAAAAACCGTTTAAtaccaaaaaat
tcaaatttatatgGTAAGAAAGGGTAAAAAATGGCGAATTTTACGATTAA
AAAGGCTAGAAGAATAGTTTGTATATGTTACTGGTACTTCTAAGGTGGAT
GCGTTTAAACCTGGCGTAATGAAATCAGGTGTTTGACTTACTCCAAATTC
TTACTTTTTATCTGCTCATTACGCCATTACCCAATAAGTAATAACTGCCT
CTCGTCGAATATATTTTGCATACTGTGCACCATTTCCAGGCTAGTACTGT
AATTTTCGTCCTATATCTTAATTGTGTTGTCATTCTCAGTCCACTTTTGG
CGATGGACCAATGCAACATCAAGAAAATGAGATTGCATATTCTTATTGTT
TGTTTTCatccatccctttagagctttagcgtggtgGTGGGCAAGGTTTA
ggtggcaatcacaaatatcttcatttcgcttCCTTGTAGGGTCTtaaaag
tgagtcggttggtATTGGTTGGTTGgctgtaaaaattttcgggttttccG
TTATAAATAAGACCTCCATCATTCATTTTTGGAgcgtatttttgaaggaa
actgccagccagcgcagcagccaaaacaaccacGTGTTATTGGtgttttc
aaattatgacctttgaacactgtgacctctgACCCAgaatggcgcatgta
atgataaacaaagtcaaaatgccgcgaatgcgctagaaatcgcttgCAGC
AAataggcaataataaaatttttgaatttaaaagaaaccTCATGGACAGA
AAAAGTCACTGAGTCACcaactcaattctactcaattctactcaattcgG
GCGACGCAACAGAGAATTacagtgtgtaaaatatataaaaaatttttggc
ccaaaa
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00007361-exon-sc0000075-1491911889:720880..722685 | TCONS_00007361-exon-sc0000075-1491911889:720880..722685 | Clytia hemisphaerica | exon |
| TCONS_00007361-exon-sc0000075-1510915933:720880..722685 | TCONS_00007361-exon-sc0000075-1510915933:720880..722685 | Clytia hemisphaerica | exon |
| TCONS_00007361-exon-sc0000075-1575043694:720880..722685 | TCONS_00007361-exon-sc0000075-1575043694:720880..722685 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000075 | supercontig | sc0000075:720880..722685 . |
Blast
The following BLAST results are available for this feature:
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