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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00007353 ID=TCONS_00007353|Name=TCONS_00007353|organism=Clytia hemisphaerica|type=transcript|length=945bp
TTTGCATGGTACATCTACGCTAATTTATCCTTACTAACATTAACTGTTGA
TCGATCACTATCAATCCGCTGGCCATTTCGGTACGAACGACTAGGCTGGA
AAAGTCACCTAACGTTTCTTATGTTTAGCCCGATTTCGTCGCTCGTCTAT
ATTTTCCGATATGTAGGAGCGCTAGCAGGTAGACGTCAATCAGGATCAAG
AAGCTCGGCTGATAATGCCGGCTCAATGAAGTTCTTTATATTTGGTATGT
CAACACAAATGATCATTCTATTAGTTTCAAACTCGATTGTTTTTACAACC
GTTCGCCGACATAAACGTACCATCAAATCCAATAATGTTAGTTCAAATGA
AAACAGTAGAAATCAGATTACTCGACGACGAGACGTTTTCACATTCTATA
TTTGTTTTGGTTGCGTCATCACTTACGTCATTTTATGGCTACCATCTTTG
ATCATCAAAATCTTACAATTTTACGGACAATATCCTATCGAGCATAAGTA
CTTTGCACTGACTATGGCAGTTGCCAATGTTAACCCAGTTTCGGATGCCG
TACTTTTTGTATTCTTCAATCGTGAATTTAAACTGAAACTCAAATCAGTG
TTACGTTTAATATGAAAGAAACCATTTTAAAACACTGTAATTTAACActt
ctgtgtcacagacccgctaggACCCCCGCCCATTGGGAAATTTGGGCGAA
ATTTCGTCGTTGTTTGAAAAAGATACTCTACAGTTTCAGCcctactggga
aattgactttgttttcgTCCTACTTTTCAATGGAAAAATTATGCACTCCA
aatcatccccactggaatttttcagctttgggatgatataatttctattc
ccattggaATTTCGTTATACAGTTTTATACCCACCGAAGGAAAAAGTTCC
ATtggggctgtgaaacagggcGCGATTGATTTTGATTGGAACTTG Run BLAST on NCBI protein sequence of TCONS_00007353-protein >TCONS_00007353-protein ID=TCONS_00007353-protein|Name=TCONS_00007353-protein|organism=Clytia hemisphaerica|type=polypeptide|length=204bp
FAWYIYANLSLLTLTVDRSLSIRWPFRYERLGWKSHLTFLMFSPISSLVY
IFRYVGALAGRRQSGSRSSADNAGSMKFFIFGMSTQMIILLVSNSIVFTT
VRRHKRTIKSNNVSSNENSRNQITRRRDVFTFYICFGCVITYVILWLPSL
IIKILQFYGQYPIEHKYFALTMAVANVNPVSDAVLFVFFNREFKLKLKSV
LRLI Run BLAST on NCBI transcript from alignment at sc0000075:513616..514560 Legend: exonthree_prime_UTRCDS Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00007353 ID=TCONS_00007353|Name=TCONS_00007353|organism=Clytia hemisphaerica|type=transcript|length=945bp|location=Sequence derived from alignment at sc0000075:513616..514560 (Clytia hemisphaerica)
CAAGTTCCAATCAAAATCAATCGCgccctgtttcacagccccaATGGAAC
TTTTTCCTTCGGTGGGTATAAAACTGTATAACGAAATtccaatgggaata
gaaattatatcatcccaaagctgaaaaattccagtggggatgattTGGAG
TGCATAATTTTTCCATTGAAAAGTAGGAcgaaaacaaagtcaatttccca
gtaggGCTGAAACTGTAGAGTATCTTTTTCAAACAACGACGAAATTTCGC
CCAAATTTCCCAATGGGCGGGGGTcctagcgggtctgtgacacagaagTG
TTAAATTACAGTGTTTTAAAATGGTTTCTTTCATATTAAACGTAACACTG
ATTTGAGTTTCAGTTTAAATTCACGATTGAAGAATACAAAAAGTACGGCA
TCCGAAACTGGGTTAACATTGGCAACTGCCATAGTCAGTGCAAAGTACTT
ATGCTCGATAGGATATTGTCCGTAAAATTGTAAGATTTTGATGATCAAAG
ATGGTAGCCATAAAATGACGTAAGTGATGACGCAACCAAAACAAATATAG
AATGTGAAAACGTCTCGTCGTCGAGTAATCTGATTTCTACTGTTTTCATT
TGAACTAACATTATTGGATTTGATGGTACGTTTATGTCGGCGAACGGTTG
TAAAAACAATCGAGTTTGAAACTAATAGAATGATCATTTGTGTTGACATA
CCAAATATAAAGAACTTCATTGAGCCGGCATTATCAGCCGAGCTTCTTGA
TCCTGATTGACGTCTACCTGCTAGCGCTCCTACATATCGGAAAATATAGA
CGAGCGACGAAATCGGGCTAAACATAAGAAACGTTAGGTGACTTTTCCAG
CCTAGTCGTTCGTACCGAAATGGCCAGCGGATTGATAGTGATCGATCAAC
AGTTAATGTTAGTAAGGATAAATTAGCGTAGATGTACCATGCAAA Coding sequence (CDS) from alignment at sc0000075:513616..514560 >TCONS_00007353 ID=TCONS_00007353|Name=TCONS_00007353|organism=Clytia hemisphaerica|type=CDS|length=615bp|location=Sequence derived from alignment at sc0000075:513616..514560 (Clytia hemisphaerica)
TCATATTAAACGTAACACTGATTTGAGTTTCAGTTTAAATTCACGATTGA
AGAATACAAAAAGTACGGCATCCGAAACTGGGTTAACATTGGCAACTGCC
ATAGTCAGTGCAAAGTACTTATGCTCGATAGGATATTGTCCGTAAAATTG
TAAGATTTTGATGATCAAAGATGGTAGCCATAAAATGACGTAAGTGATGA
CGCAACCAAAACAAATATAGAATGTGAAAACGTCTCGTCGTCGAGTAATC
TGATTTCTACTGTTTTCATTTGAACTAACATTATTGGATTTGATGGTACG
TTTATGTCGGCGAACGGTTGTAAAAACAATCGAGTTTGAAACTAATAGAA
TGATCATTTGTGTTGACATACCAAATATAAAGAACTTCATTGAGCCGGCA
TTATCAGCCGAGCTTCTTGATCCTGATTGACGTCTACCTGCTAGCGCTCC
TACATATCGGAAAATATAGACGAGCGACGAAATCGGGCTAAACATAAGAA
ACGTTAGGTGACTTTTCCAGCCTAGTCGTTCGTACCGAAATGGCCAGCGG
ATTGATAGTGATCGATCAACAGTTAATGTTAGTAAGGATAAATTAGCGTA
GATGTACCATGCAAA
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00007353-exon-sc0000075-1491911889:513616..514560 | TCONS_00007353-exon-sc0000075-1491911889:513616..514560 | Clytia hemisphaerica | exon |
| TCONS_00007353-exon-sc0000075-1510915933:513616..514560 | TCONS_00007353-exon-sc0000075-1510915933:513616..514560 | Clytia hemisphaerica | exon |
| TCONS_00007353-exon-sc0000075-1575043694:513616..514560 | TCONS_00007353-exon-sc0000075-1575043694:513616..514560 | Clytia hemisphaerica | exon |
The following polypeptide feature(s) derives from this transcript:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000075 | supercontig | sc0000075:513616..514560 . |
Annotated Terms
The following terms have been associated with this transcript:
Vocabulary: Biological Process
| Term | Definition |
|---|
| GO:0007186 | G-protein coupled receptor signaling pathway |
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0004930 | G-protein coupled receptor activity |
Vocabulary: Cellular Component
| Term | Definition |
|---|
| GO:0016021 | integral component of membrane |
GO Annotation
GO Assignments
This transcript is annotated with the following GO terms.
| Category |
Term Accession |
Term Name |
| biological_process |
GO:0007186 |
G-protein coupled receptor signaling pathway |
| cellular_component |
GO:0016021 |
integral component of membrane |
| molecular_function |
GO:0004930 |
G-protein coupled receptor activity |
Blast
The following BLAST results are available for this feature:
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