TCONS_00007340 (transcript) - C. hemisphaerica

Overview
NameTCONS_00007340
Unique NameTCONS_00007340
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length304

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00007340 ID=TCONS_00007340|Name=TCONS_00007340|organism=Clytia hemisphaerica|type=transcript|length=304bp
GTGAATATCACTTCTTTTTCCAACaaattcaagggtttcaagggtcattt
tttactaattttccAGGGTTTCAACAAGTTTCAAGGGTTTTTTACCACAA
ACTTTCAATATCAAGGGATTCTAGTTGATCTTTGCTAATTCAAGGTTGAA
TCCTCAACTCCCTGAAAATGCATAAAATAACCCTAAGACGTTTTCTTCAA
CAAAGTCATAAAAACCTTGAAATCTTTTGGACAAATCAGTCTTTTCAATC
CCCTTGATTTTGAACAGAACCTCAATAACATTCTTCAACAGATACTTTCT
TTAT
Run BLAST on NCBI

transcript from alignment at sc0000075:204412..204715

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00007340 ID=TCONS_00007340|Name=TCONS_00007340|organism=Clytia hemisphaerica|type=transcript|length=304bp|location=Sequence derived from alignment at sc0000075:204412..204715 (Clytia hemisphaerica)
ATAAAGAAAGTATCTGTTGAAGAATGTTATTGAGGTTCTGTTCAAAATCA
AGGGGATTGAAAAGACTGATTTGTCCAAAAGATTTCAAGGTTTTTATGAC
TTTGTTGAAGAAAACGTCTTAGGGTTATTTTATGCATTTTCAGGGAGTTG
AGGATTCAACCTTGAATTAGCAAAGATCAACTAGAATCCCTTGATATTGA
AAGTTTGTGGTAAAAAACCCTTGAAACTTGTTGAAACCCTggaaaattag
taaaaaatgacccttgaaacccttgaatttGTTGGAAAAAGAAGTGATAT
TCAC
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_004119XLOC_004119Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00007340-exon-sc0000075-1491911889:204412..204715TCONS_00007340-exon-sc0000075-1491911889:204412..204715Clytia hemisphaericaexon
TCONS_00007340-exon-sc0000075-1510915933:204412..204715TCONS_00007340-exon-sc0000075-1510915933:204412..204715Clytia hemisphaericaexon
TCONS_00007340-exon-sc0000075-1575043694:204412..204715TCONS_00007340-exon-sc0000075-1575043694:204412..204715Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000075supercontigsc0000075:204412..204715 .
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
1.49248	1.45541	1.68986	2.89322	2.51587	0.397615	2.39853	0.449094	0.314422	0	0	1.24248	0.496302	0	0.847481	0.682107	0.5602	0	0	0.830101	0	1.58367	0.427813	0	1.20181	1.07259	0	0	0	0
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00007340 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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