TCONS_00007320 (transcript) - C. hemisphaerica

Overview
NameTCONS_00007320
Unique NameTCONS_00007320
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length1975

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00007320 ID=TCONS_00007320|Name=TCONS_00007320|organism=Clytia hemisphaerica|type=transcript|length=1975bp
TGCATGCTTTACACTTTGTGCTCCAGAGATCAGGTCACCATGGAAAATTT
TCTCTATAACTTTCAGCCTTCAAAAGACACAGAAGAATCTTCTCGAGATG
GCTGGGGAGGAAGGgaaatctaacattttcaatgaaGTATCCATATGGGT
TAACGGCTACACTGAACCATCATCAGATGAATTGCGCAAAATCATGGGAG
AGCATGGAGGGAAATATCAACACTCGTTTTCAAAGACATATGTCACTCGT
GTCATCGCTACAAACCTACCCGacagtaaaatcaaaaacttgaaaagaaa
tgatAAAGTTGTCCGACCGAATTGGATTGTTGACAGCTTGAAAGCTGGAC
GCCTACTATCAATTGACAAGTATCTTCTATACTCGGTCAACAAGAGGGAT
GGAAATGTTCTTAGTTTTCAGTCTCTCAAGACGAAGCAGCCATCTTTGGA
TAGTGGTTTTGGGTCCGAATCATTGTCAGCTCCCTCCAAACATGCTAACG
ATATCACAACAGACAATGCTGAAATCATTGACCAAGACTCAAATAAAACC
TGTCATCAACAACCTATACTATCAAAACATGACTACTCAACTAAACCAAA
AAGTACCATCAAATCGCCATTAAAAGCTGAAGCTGAACAAGACAATTTTA
TATCTGAATATTACACTCATTCGAGACTTCACCATTTATCAATGTGGAAA
GCTGAGTTGAAAAAATTTACAGATAGTATCCAGAAGAAAAGAGTCTCCTC
CACCAAAACTGTATCATCTCACTTTTCCCGTCAAACACTCATAATGCATG
TTGATcttgattcattttttgtttctgtttcattgaaattgaattCAGAA
CTTCGAGGAAAACCATTAGCAGTTTGCCATTCAACGAGTCAAGGTCCCAA
TACTGGAAGTTCTTCATCATTTTCTGAAATCGCGTCCTGTAGTTACGAAG
CTCGTCAATATGGTTGTCGAAACGGCATGATGTTAAAACACGCAAAAAGT
CTTTGTCCAAACCTTATCTGTGTACCGTACCAATTCGAAGAGTACCGCAA
TGTCTCGTAAAAGTTTTACGAGGTTTTAGCTTCTCACACGACTTCGATTG
AGGCTGTAAGTTGTGACGAAGCGTTGATGGATATATCGAAGTTGGTTACT
GGAGAAGATGACAATGAAGTGAAAGAGTTGGCGGAGAAGATACGATCAGA
GGTGCTGAAGAGTACAGGTTGCACAGCCTCTTGTGGTATTGGTAACTCCG
TGCTCATTGCCAGGCTTGCTACAAGAAGAGCTAAACCTGATGGTGTTCAT
TATGTACTGGATAACGATATTCCCGAGTTTATTGAATGTCAGAAGGTGAT
TGACCTTCCCGGTATCGGGCGTGCACAAGGTGAAAAGTTTACCGCCCTCA
ACATTCAAACATGTAAAGAACTTCAAATGTTGTCTTTAACACGACTCCAG
AAAGAGTTCGGACCGAAACAAGGAGATACTCTGTACAAATTTTGTCGTGG
TAAAGATGACCGTGGTTTGAAATTGGAGCACGAGAGAAAGAGTGTGTCCG
CGGAAATTAATTACGGAATGAGGTTTAAAGAGtACGAGGAAGTTGATCGC
TTCATGAAAGAACTCTCACAAGAAGTTTCAAAACGGCTGAAGGAGGTTTC
CAAAAAAGGAAGTCAAATCACATTGAAGGTGATGATTCGGAAGAAGGATG
CAATGGATCCTGCCAAATACATGGGTCATGGAATATGCGATCATTTCTCG
AAAGGTGTCAGTTTACCAGAACCTACAAGTGACCCTCTTGTCATTTCGAA
GAACTGTGTGAGCATTTTGAAAACACAGAAAATTCCTGCGTCAGATCTTC
GTGGTATAGGGATTCAAATGACCAAATTATGTGACAGTTCGTCGGCTTCT
ACATCAAATACGTTGATGAAATTTGCACAGAAAGTAACTGCCGAGCAACT
TCACCAGCGGGATAGGATCGTAAAG
Run BLAST on NCBI

transcript from alignment at sc0000075:440192..451482-

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00007320 ID=TCONS_00007320|Name=TCONS_00007320|organism=Clytia hemisphaerica|type=transcript|length=11291bp|location=Sequence derived from alignment at sc0000075:440192..451482- (Clytia hemisphaerica)
TGCATGCTTTACACTTTGTGCTCCAGAGATCAGGTCACCATGGAAAATTT TCTCTATAACTTTCAGCCTTCAAAAGACACAGAAGAATCTTCTCGAGATG GCTGGGGAGGAAGGGTACGTAAAAAGTTTTCCATTTCATTTATAAAAAGT GGCTAAATTTTTCCCGTCAGTCAAAAAATGTTTTGTCGCTAGTAAGAGAA GAGAGTCTTCTAACTGCTTCTTACAGCTTGGTAAAACCCGTGTGTTTTCA TTATGTAAACGAAAGTACTTACACATAGTTGTGACGTCGAGAAAGTCAAA ACAGTAGAGAACATCGTAAATTCCTTGTCAATTAAGTAGTATAAAAAAAC GAATCAATCGTAACTGGCATAACAGCTTTCGTTTTCCCAAAGGAGAATTA AAAACGGCACATTACATTTAATGCGTGAGTGACTTTTTAAGCTATAAAAG TTGAATACCAGGCGACTATCACTGGTGGTGATAAGATTTATATGAGAGTA ATCGTCACGAAAAGCGCTAATAAAATATCGAAAAATGGAGATTCCCAAGA TTGGCGAAGGTATCTTAAATCTTAGTAAAAAAAATCTCTTTGATCTTTCT TTTTTTTTCTTTTGTTAATTGCTTACGTCATTGATGACTTGCGAGATATT TCTCATGATGAAAACACACGGGTTTTACCAAGCTGTCTTAGTGCCAGCTA TCAAATAGTTCATATATCACAGCGCTCCTCTACCCTGTATTTCCGGAATA ACCAAAATACATCTGGGGAAAACACTCAGAAGCAGCTAAATCCAAGAAGA CGCAAGTATTGTGCAGGCATGGCTGACAGCCCTGCCTAAATCCGACATGG TCTTTCAAAGATACAAACTAAAATAAAAACAAACCTTAAGCTTTGACGCA ACGAAAATACCAAAGTGTCAACTAAACTGAGAAATTTCAGTCAGGCACAT CCTGGCAAATGAACGGGGTGAGCATTTGCATGGGGTATTCGTCACCCAGT GTAAATGAGATAGGACGTCTCAGGNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNCAGGCTAAAAGCGTGAAAATGAATAAAAATGAACTTCA AACTGAAAAAGGGAAAAAAGGAAGAAAACTGGGAACTTTATTTTTTCATT AAAAGTTTCTTCAATCTGCGAAGACAAAATTGACCCATGGAAAAAAAATT TCATCTATGCAGTTCTTTGAAATGAAGCAAAATATTTCCAACCCGGTTCA ATTAAACTGGGTATTGGGCGCTATTACGTCACTTTCGTTTTCGACCCGTT CATTTGCTAATGGTCGCAAGTGAAAAATACCCCGTTCATTTGCCAGGATG TGCCTGACTGAATTTGATACAGCAAACCAGTTGAACCAAACAATTAACAA TAATTGCTTCTTATACGAAACATGATTTTTTATTGCAATATGTCCAACGT CATAAATGACAATAAAGGGTAGGTAATTACTTTTACAACTCACACTTTTT AATTACAGTATTGACATTTCGACATTATAGCCATCTTGTTAGTTAGATGT TTTGAATTTGTTTTGAGAGTTCTTGCAATAGTTTATCATTCAACTTGGAG AGGGAGTGTATGTAAACATAGGATTTTTTTCATAACCGTTATTTGGGGGG TCGGAATTAGGTAGGGCTGTCGGATTTAGGTAGGGCTGTCAGATTTAGGA CCACTCACGGTAATTCCCACACCGTGTCAGTGGATGGTAAACCCTCCATC CCATGTCAGGACATATTCATGGCTGGGGTTTATTTCAGTTCGGAAGTTTG CATAGAATCGTGCAGCGCTGAAAAATTCTGCAACTTTAGTGTTGTCAAAT TCAGCAATGTTTTCGTCTAATTTTGCAACTTTTCTGTTGCTAAATTTGAC AACACTTGTCTCTGCACCAAGAACGGGGTCATATGGTGAGGAGCTTTTCA CTCTTGGATTTTTCACAATCATTCTTGAAAGTATAACTTCATAAATAGAG AGATTTTGCTTGCGTATTCTATGAAATTGGTTGGTGTTCATAACTTCAAA TTACATTGCGTTGTGTAGAATGACAGCTCATCCTTGTCTTGTGGTAGCGT TGAAAAAACTGTAAAGTTGCCAAATTTTGCAGTGCAATGGAACTATGCAA CTTTCCGAACTGATTAGGAGGATTTGTGATTGTAACAGTTAGCCTAACCC TATTTTTCAGCTGCTTTTGGCCTAATTGTTAGCAAGTTGTGTTTCAAATA GTTGTTGGGAGAACACAACAGTCTTTTGAATAACTAATTACTCCCCAGCA GAAATCTTTTTAATGATAACATCATCTCATTGATTTGTCTTTTACAACAC AGCAGTTGCTTACTAAGGGACAAAATAATTTAGCCAGTTTGTACTGGCTG AGGGAAGGTAATTGCCACCGAGCGAGCACAGCGAGCATAGGTGGCTTCAT AGCTTCACGAGGTTGTGCAGATGGTTTAAATTTTCGCCGTCTTTTTTTTT TTTNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NATAGATATTTGCCTGCTCTATAAGCTTTTTAGTGTGGGCGTCTGCTAAT AAGCCGTCGGAAATGGGCAACAAGGTAATAAATGAAGCTTCAATATAGAA CTTCACCTATCTTGATACCTTTTGCTAATCAGAATTTTAATTTTGAATCA TTAAAAACTCCAGTGTACCGTTGTTTTGTGTAAGATTCCCATTTCCGCAC TAAGATTCTTGATACTTTTCTGGAATCTTTTCCCTATATATTTTACGGGA TAACCAGGAAAAAATTGGGGAGGGTTCGTTTAANNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNGAAA ATCTTCACATTATTTCTTCATGTAACCAACCTATGCTTATATTTTATATA TTATAATATATTTTATTTATTATTATTAGGTGGCACTTAGTGTAAGCTAT ATCTAGTATATATGGAGTAGTTTGTTATTCAATAGACGGCTGCGTTCTCC CAACTATCACTCCTCCATCTCCACAACTATCACTGATGAGATTACTTTTG TGGTTCGAGGCAAGTTAGGTTGAGGTAATGGTATGGGAAAACGCAACGGT CTTTTTGAATAACTAAGTCTATGCAGTGGCACCTAAAACTCCCACATTCG CATCTCACATAAACCAGCATCTCACAAAATTTATTTTTTTCGGCCGGGTG ACTTTCAAAAATAAGTTCACCCGGCCGATTTCCGGAAACAAGACTTTTTG GCCTCAACTGAAAAGGATTATCCAATCAATCAAATTAAGGTTTAACATGT ACATCCGTGCCACGATTTCTTCTTCTTTATACTTACTGAATAGCATGGGA TACGTTAAAATTGGCAATATGGAAAATTAAAGTTAGTTTAATGCAACAAG CTTTTTTGTTAAGGGTGGTTATATGCAAGCAAGAAAATCGAAACATCAAG ACCAGTTTCAAACCTCATTTTCAAGGTAATATAGGATATATCTTAATATG AGCTTTTTTATGAGCTCTTTTATATTTTTGCACTGGAACTCAATATCAGT AAAAATGTAAAAAAACAGGATTTCCAGAGGATTTCCATACGTATCCCTAT ATTTCATGCAAAAGGTTTAAAGATTTAGTGTGGTTTTATTTTCATTAAAT AATTAGAAGGAGTTGATGCGTAGGGTATTGTAGTTGACCTTTTAAGCCAA GGGGCCTGTGATATCTTTAGAGTTCTGACAAAACTCAATTTTTAATTCAG GAAATTTTGCCTGTTAGTAAGCAATTACTGACTTTCGCAAGACTAGCTGT CAACAGGATGCTAGTGATTGTGTATGAAATTAATAATAAGAGAAAAGTGA AAATATAAAAACTGATATTTGCATACAAATCTTAATATAGCACTCTGTAT ACGTAACGATTATATTATACTGATTTGCTAATTTTGAACAATGCAAATTT CACTTCCATGAGTCTGTATGATTTTGAATGGCTAAAAAACTTCATCTTGG ATTTTCAGTCAAAAAGAAAAGACACTTTTTTATTCTGCTACTGGTAATTT CATGCCACTTTTGTGACAATCTTCAGGCAACTAGAAATAAAAAATACATT ATCTATTTTGAAAAAACAATTCAATAGCTTCTTTTTATATGACGTCAATA TTTCCGTCAAAAAGTTCAAGATCGAATTTACGACGATGGCGACATTTCGC CATGATTGAATTTTCTAAATGCAAAGAACACTTGATATATTTTACAAATT TTACTTTTAGGAAATCTAACATTTTCAATGAAGTATCCATATGGGTTAAC GGCTACACTGGTATGAAACGATTTCTGATCTAAATCTCATCTTTTGATCT ACTTGACTAAATGAATTTTTATTGATTTGCTTAATGTTAATGACAAACAA AATAACCAGAAGCATTTTTGTTTTTTATTAAAAACTTTATATTCGACCTC ACTCACAAGAGGTCATCATCAGAGTAAAAATCTAATACTTTTTTTGCTTA GGCGAGACCAATTTAATTCGTTGTTCTACGGGCAGATCGTTAGCAAAATA TGGGTTGGTCGGTCGGTAAAATAAAAATAAATTTTTCATTTATCAGGGTT GGTAAAGTATCGAAAATGTTTTCCAAAAAATATCTGGTTCAAAAATTCAC TTTTTTTATCTTCGATGAAGATCATAATAAAATCTTAGTGCATGGAATGC TTGATTTTCTAAATTTTTCGATTTCTTTAATTAATTTTCAGCTTTATTCA AATTTCATTCTTACAAATAAGTAGTGTGTATTGGAAATTCAATATTATTT TTTTTTGATTTTAGCAAAAATAGGGTCGGTCGGGACCGTAAACAACAAAT TAAATTGGTCTCGCCTTAATGGTAAATGAAATTTTAAGAATGGTATGACA TTTTTAAAATTCAGTTTAAAATTCGCTTTTCAAATTCAGAAAGGTGTATG AATGTTTTTTTGAAAACAAATACAAGAAAAACCTTTTTCACTGAAGCCCA ATAAAATTAAAGATATTGTTTTGCCTTATTTTCATACATAGAACCATCAT CAGANTAATTTTCAGCTTTATTCAAATTTGATTCTTACAAATAAGTAGTG TGTAAAATATATTGTATTGGAAATTCAATATTATTATTTTTTTGATTTTA GCAAAATATGGTCGGTCGGGCCCGTAAACAACAAATTAAATTGGTCTCGC CTTAATGGTAAATGAAATTTTAAGAATGGTGTGACATTTTTAAAATTCAG TTTAAAATTCGCTTTTCAAATTCAGAAAGTTGTATGAATGTTTTTTTGAA AACAAATACAAGAAAAACCTTTTTCACTGAAGCCCAATAAAATTAAAGAT ATTGTTTTGCCTTATTTTCATACATAGAACCATCATCAGATGAATTGCGC AAAATCATGGGAGAGCATGGAGGGAAATATCAACACTCGTTTTCAAAGAC ATATGTCACTCGTGTCATCGCTACAAACCTACCCGACAGTAAAATCAAAA ACTTGAAAAGGTAACTGAAAGGGAAGAAACTCTTTGTAAATAAATTAGCA AAAGATTCTTCCTTACTTCTGAAAGTTTGATAGAATTGAATATTTAACAG ACCATCAAGTCTTAGAATGTCATCCAAAAATATCACAAATCTTTACTCTT TTGGTAAACCCAGACCCTTAAAACTTTTGATTATGAAGAATTCTACTTAG AATTTGTTCATGTTGTGACCAGTAAAGAATTTTGTTTGAAAAACCAATAC AGTTGGTATTTTGATCAGTTGGTTATATGATTATTACTGTGAATTAGACC AATGTTGAAACAAAATTTTAGAATTAAAAGATTATGAATCAGCTTTGTTT CAAATTTTTTAGAAATGATAAAGTTGTCCGACCGAATTGGATTGTTGACA GGTTTGTTTTACTTCTAGACTGTTTTTTTTAGAGATAATGAATTTGAAAA CAATGTGCTCATGGTAAATTTAGGTGCAGATATATCTTTACTTTCAGGTG TCTAATAAAAAGGAAGGTTGAAATAAATAGGGAAATGATAGATAAACGTG GGGTCCTAATTGCCGGGGAATGAAATTATACTTCAAAATACCTTCAAGAG AAACTAAAAATATTCAAACTTAGAGGAGAATGAGCTACCCTTCTTTTGAC AGTTAAAATATTTTTAAAGATTATTTACCCGGGATCAATGGGGTAGGAAA AAACTACAAAATGAAATATCAGACTATTAAGACAGTTTCTGAACCATTAG TTCAAAACTTGAAAATCGGCAACCTCTAGAAAAATAGCATATTCAAGCTG ACCATATAACCTTCTACAACATTTTATAGTTTCAGAAGGTATAGGTTTAC TATTTAGGCTTCTGTGGTAAAATTTGTTAATTTTTAGGGTTGTCACTGTT TTTTAACTTTAATTTACAAAAAATATTATTTTTTTGTGTATAGCTTGAAA GCTGGACGCCTACTATCAATTGACAAGTATCTTCTATACTCGGTCAACAA GAGGGATGGAAATGTTCTTAGTTTTCAGTCTCTCAAGACGAAGCAGCCAT CTTTGGATAGTGGTTTTGGGTCCGAATCATTGTCAGCTCCCTCCAAACAT GCTAACGATATCACAACAGACAATGCTGAAATCATTGACCAAGACTCAAA TAAAACCTGTCATCAACAACCTATACTATCAAAACATGACTACTCAACTA AACCAAAAAGTACCATCAAATCGCCATTAAAAGCTGAAGCTGAACAAGAC AATTTTATATCTGAATATTACACTCATTCGAGACTTCACCATTTATCAAT GTGGAAAGCTGAGTTGAAAAAATTTACAGATAGTATCCAGAAGAAAAGAG TCTCCTCCACCAAAACTGTATCATCTCACTTTTCCCGTCAAACACTCATA ATGCATGTTGATCTTGATTCATTTTTTGTTTCTGTTTCATTGAAATTGAA TTCAGAACTTCGAGGAAAACCATTAGCAGTTTGCCATTCAACGAGTCAAG GTAAAAATCCTTTAATACTCGTTTTTAAGGAAAACTGCCTTCTTTATAAA AGCTTTTGATAATGTTACGCCGTGATGGCAAAGAAAAATTCACTTCTTTT CTCATTTGCTTGAAAAAGAATTTCACTAGAAAAGAGTTTTTTTCTTTTTG CTGGGTTGTACTGTGATAATAAACCTGCGATATACCTTATCGGGGAAAAC TTCGTCGGGGAAAATTTTCGTCGGGGAAAATTTTCGTCGGGGAAAAATAT TCGTTACTTGGCCAAAATTTCGTCACTTTTCCCCGACGAAGTTTTCCCCG ATAAGGTACCTAAACTATGCATATGTAGAGAGAGCCGACGGCTTTTGCTT TTATTGTAATTTTTTAGCGGTAAAAAAGATACCTTGCTTATATTTCAGGT CCCAATACTGGAAGTTCTTCATCATTTTCTGAAATCGCGTCCTGTAGTTA CGAAGCTCGTCAATATGGTTGTCGAAACGGCATGATGTTAAAACACGCAA AAAGTCTTTGTCCAAACCTTATCTGTGTACCGTACCAATTCGAAGAGTAC CGCAATGTCTCGTAAAAGTTTTACGAGGTTTTAGCTTCTCACACGACTTC GATTGAGGCTGTAAGTTGTGACGAAGCGTTGATGGATATATCGAAGTTGG TTACTGGAGAAGGTACTGGAACTAGCTTATTTACTGAATGAGATAAGGAT TACATAACAGTCTAAGCAAATAATGTAAAAATAACCTTGATTTCTAGTTT TATCCTATTATGATGAAACACCATTCTTGGAAACGTCCATTACCTGAAAA AATAATTTTGAGATAAAGAATTAGGTACAAAGCATTAGCATTTTAGTGAA ATTCCTTTACAAGGCTTCTCGCTTACCCCAATTATTTAATTTTTATACCA CCAGCTACTTTTTTGAACCACATTTAAACATTCATGTATTTAGTCTGGCA GTAATGTAACAAAACAGAGTTTGATTTCCCCAATCAATTCCCCCATGAGC CTCATTCCGGGTATGTCAATTTCTATGAAATCTCGCTTATAACGGTACTA AGCAAGACTGTGTGAAATTTTTTCCATGGTCAAACTCTAATTCTGCAAGG CTATTAAAGTTCTTTTATCATTCAGATGACAATGAAGTGAAAGAGTTGGC GGAGAAGATACGATCAGAGGTGCTGAAGAGTACAGGTTGCACAGCCTCTT GTGGTATTGGTAACTCCGTGCTCATTGCCAGGCTTGCTACAAGAAGAGCT AAACCTGATGGTGTTCATTATGTACTGGATAACGATATTCCCGAGTTTAT TGGTAAGGAGCCCTAAGGAGCTTATTTCACTTATTCAATTTCAAACTGCA AGGCTGATTAAAAAAAACATCTTGACTTGACTTGACCAAGATATCGATGC CAAAGGCTAAACCATCTGGAAATATTAGAATTTGGATTTTTTGCTCTGAG CTATGGAAGGATTCTACAGACCAAAAGTCTGAAACCATCTGATAATCTGA TCATCCCTTTAAATCCAAATCATTTCGAATCACTTTTGATTAATTTATTT CTAGAATGTCAGAAGGTGATTGACCTTCCCGGTATCGGGCGTGCACAAGG TGAAAAGTTTACCGCCCTCAACATTCAAACATGTAAAGAACTTCAAATGT TGTCTTTAACACGACTCCAGAAAGAGTTCGGACCGAAACAAGGAGATACT CTGTACAAATTTTGTCGTGGTAAAGATGACCGTGGTTTGAAATTGGAGCA CGAGAGAAAGAGTGTGTCCGCGGAAATTAATTACGGAATGAGGTTTAAAG AGGTATCTGTTAATCTGTATTAAAGAGATACTCTCTGCTACCTAATAGCC GTCCCCCCCGCTAATTAATTTTTCGAAAATTTTCCACCCAGGACATTCTT ATTCCAACCCCTCCTCCCCGCTTATTAATTTTTGGGAAAATGTTTTTGAA AGTTTCCTCTTTTGTCCTAATTCAGCTGTATTAGCCTCCTTTTCAAAAAT TTTCGACCCAGGACATTTTTATTCCAACACCCCCCCCCCCCTTTTTAATT TTTTGGAAAATGTTTTTGGAAGTTCCCTTTTTTGTCCTAATTCAGCTGTA TTAGCCTCCTTTTCAAAAAATTTCCACCCAGGACATTTTTTTTCCAAACC CCCCCCCCCCCCGCTTATTAAGTTTTGAGATTTTTTCCAAACCCCCCCCC AGCTTATTCCAATCCCCCCGGCTATTAGGTACCCGAGAGTAATGGTCGAT ACTTGACGTGGACAACCAAATAGTAAATTAGGACGTTTAAACAGCCTTTT GATCGTCTTCACGGTGTTTGGGCCACAAATTGAAAAGTAAATTAGAAGGG TTCGGAATTTGAACTGAGAGCCCTTTATCTGTGGCGTTAACGCCTTAGGT CACTCGGTAGTTGCTCTGTTTATTCATAGAGCTAAAAGGAGAACTATCTT AAAACTCCGTGTCTGGAATTGAAATCTGCTTATGGTAACGACAATGCTAT GATCTGTGTTGGATGGATTATAGTACACAAGGTCAAGATATGAAGTTTTA TTTCTGATGATCTAGAGTCTTCTGAAACTTTCTTTTTTAAGTACGAGGAA GTTGATCGCTTCATGAAAGAACTCTCACAAGAAGTTTCAAAACGGCTGAA GGAGGTTTCCAAAAAAGGAAGTCAAATCACATTGAAGGTAAGAAAATTAA CAAATCAATATTTGAAATTCCAAGAAGATATCCAGCAAAGAACATGTTTC ATTCTATCTTCCCAGTTTCTAATCAGGTCATTTTATGATCTAAAAGTCAA AGGTTTTCGTTAACAATTAATCTTTACGTTTTCTAACAGACGATGACAGG AATCACCCAAGATTCTTTACTTTGGTTACAATTGTGACGCTTCGTCCTCT CCGTTTCTTCTTTCAAATAAGAGGAATCTACAATCACTGATTTTAGAGCG AGCTTGAAATGATGTCGTGAATACTGTTCTTCATTGCTTAACAGGTGATG ATTCGGAAGAAGGATGCAATGGATCCTGCCAAATACATGGGTCATGGAAT ATGCGATCATTTCTCGAAAGGTGTCAGTTTACCAGAACCTACAAGTGACC CTCTTGTCATTTCGAAGAACTGTGTGAGCATTTTGAAAACACAGAAAATT CCTGCGTCAGATCTTCGTGGTATAGGGATTCAAATGACCAAATTATGTGA CAGTTCGTCGGCTTCTACATCAAATACGTTGATGAAATTTGCACAGAAAG TAACTGCCGAGCAACTTCACCAGCGGGATAGGATCGTAAAG
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_004106XLOC_004106Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00007320-exon-sc0000075-1575043694:451369..451482TCONS_00007320-exon-sc0000075-1575043694:451369..451482Clytia hemisphaericaexon
TCONS_00007320-exon-sc0000075-1575043694:446173..446222TCONS_00007320-exon-sc0000075-1575043694:446173..446222Clytia hemisphaericaexon
TCONS_00007320-exon-sc0000075-1575043694:444973..445105TCONS_00007320-exon-sc0000075-1575043694:444973..445105Clytia hemisphaericaexon
TCONS_00007320-exon-sc0000075-1575043694:444582..444620TCONS_00007320-exon-sc0000075-1575043694:444582..444620Clytia hemisphaericaexon
TCONS_00007320-exon-sc0000075-1575043694:443483..444039TCONS_00007320-exon-sc0000075-1575043694:443483..444039Clytia hemisphaericaexon
TCONS_00007320-exon-sc0000075-1575043694:442821..443084TCONS_00007320-exon-sc0000075-1575043694:442821..443084Clytia hemisphaericaexon
TCONS_00007320-exon-sc0000075-1575043694:442181..442357TCONS_00007320-exon-sc0000075-1575043694:442181..442357Clytia hemisphaericaexon
TCONS_00007320-exon-sc0000075-1575043694:441681..441928TCONS_00007320-exon-sc0000075-1575043694:441681..441928Clytia hemisphaericaexon
TCONS_00007320-exon-sc0000075-1575043694:440796..440891TCONS_00007320-exon-sc0000075-1575043694:440796..440891Clytia hemisphaericaexon
TCONS_00007320-exon-sc0000075-1575043694:440192..440488TCONS_00007320-exon-sc0000075-1575043694:440192..440488Clytia hemisphaericaexon
TCONS_00007320-exon-sc0000075-1510915933:451369..451482TCONS_00007320-exon-sc0000075-1510915933:451369..451482Clytia hemisphaericaexon
TCONS_00007320-exon-sc0000075-1510915933:446173..446222TCONS_00007320-exon-sc0000075-1510915933:446173..446222Clytia hemisphaericaexon
TCONS_00007320-exon-sc0000075-1510915933:444973..445105TCONS_00007320-exon-sc0000075-1510915933:444973..445105Clytia hemisphaericaexon
TCONS_00007320-exon-sc0000075-1510915933:444582..444620TCONS_00007320-exon-sc0000075-1510915933:444582..444620Clytia hemisphaericaexon
TCONS_00007320-exon-sc0000075-1510915933:443483..444039TCONS_00007320-exon-sc0000075-1510915933:443483..444039Clytia hemisphaericaexon
TCONS_00007320-exon-sc0000075-1510915933:442821..443084TCONS_00007320-exon-sc0000075-1510915933:442821..443084Clytia hemisphaericaexon
TCONS_00007320-exon-sc0000075-1510915933:442181..442357TCONS_00007320-exon-sc0000075-1510915933:442181..442357Clytia hemisphaericaexon
TCONS_00007320-exon-sc0000075-1510915933:441681..441928TCONS_00007320-exon-sc0000075-1510915933:441681..441928Clytia hemisphaericaexon
TCONS_00007320-exon-sc0000075-1510915933:440796..440891TCONS_00007320-exon-sc0000075-1510915933:440796..440891Clytia hemisphaericaexon
TCONS_00007320-exon-sc0000075-1510915933:440192..440488TCONS_00007320-exon-sc0000075-1510915933:440192..440488Clytia hemisphaericaexon
TCONS_00007320-exon-sc0000075-1491911889:451369..451482TCONS_00007320-exon-sc0000075-1491911889:451369..451482Clytia hemisphaericaexon
TCONS_00007320-exon-sc0000075-1491911889:446173..446222TCONS_00007320-exon-sc0000075-1491911889:446173..446222Clytia hemisphaericaexon
TCONS_00007320-exon-sc0000075-1491911889:444973..445105TCONS_00007320-exon-sc0000075-1491911889:444973..445105Clytia hemisphaericaexon
TCONS_00007320-exon-sc0000075-1491911889:444582..444620TCONS_00007320-exon-sc0000075-1491911889:444582..444620Clytia hemisphaericaexon
TCONS_00007320-exon-sc0000075-1491911889:443483..444039TCONS_00007320-exon-sc0000075-1491911889:443483..444039Clytia hemisphaericaexon
TCONS_00007320-exon-sc0000075-1491911889:442821..443084TCONS_00007320-exon-sc0000075-1491911889:442821..443084Clytia hemisphaericaexon
TCONS_00007320-exon-sc0000075-1491911889:442181..442357TCONS_00007320-exon-sc0000075-1491911889:442181..442357Clytia hemisphaericaexon
TCONS_00007320-exon-sc0000075-1491911889:441681..441928TCONS_00007320-exon-sc0000075-1491911889:441681..441928Clytia hemisphaericaexon
TCONS_00007320-exon-sc0000075-1491911889:440796..440891TCONS_00007320-exon-sc0000075-1491911889:440796..440891Clytia hemisphaericaexon
TCONS_00007320-exon-sc0000075-1491911889:440192..440488TCONS_00007320-exon-sc0000075-1491911889:440192..440488Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000075supercontigsc0000075:440192..451482 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0.268053 2.2746 1.68287 0.213731 0.192191 5.19859e-10 0.774815 0.00229756 0 0.0348968 5.3515e-09 0.148466 0.44675 1.99122e-07 1.63652 0.000226541 0 1.50675 1.38415 0 0.000132639 2.16928 3.42746 2.70752 1.62402 8.36834e-06 1.15229 1.16254e-06 2.27024 0.00214504
Blast
BLAST of TCONS_00007320 vs. Swiss-Prot (Human)
Match: REV1 (DNA repair protein REV1 OS=Homo sapiens GN=REV1 PE=1 SV=1)

HSP 1 Score: 354.755 bits (909), Expect = 3.800e-107
Identity = 196/483 (40.58%), Postives = 287/483 (59.42%), Query Frame = 2
Query:  644 NFISEYYTHSRLHHLSMWKAELKKFTDSIQXXXX-----------------------XXXXXXXXHFSRQTLIMHVDLDSFFVSVSLK------------------------------------LNSELRGKPLAVCHST-------SQGPNTGXXXXXXXXXXXXYEARQYGCRNGMMLKHAKSLCPNLICVPYQFEEYRNVS*KFYEVLASHTTSIEAVSCDEALMDISKLVTGEDDNEVKELAEKIRSEVLKSTGCTASCGIGNSVLIARLATRRAKPDGVHYVLDNDIPEFIECQKVIDLPGIGRAQGEKFTALNIQTCKELQMLSLTRLQKEFGPKQGDTLYKFCRGKDDRGLKLEHERKSVSAEINYGMRFKEYEEVDRFMKELSQEVSKRLKEVSKKGSQITLKVMIRKKDA-MDPAKYMGHGICDHFSKGVSLPEPTSDPLVISKNCVSILKTQKIPASDLRGIGIQMTKLCDSS 1891
            NFIS +Y+HSRLHH+SMWK EL +F +++Q++                         +   +V +    Q+ IMHVD+D FFVSV ++                                     N  L+GK   +  S+       +Q     S  S +EIASCSYEARQ G +NGM   HAK LCPNL  VPY F  Y+ V+   YE LAS+T +IEAVSCDEAL+DI++++  E      E A  +R E+   T C AS GIG+++L+AR+ATR+AKPDG +++   ++ +FI  Q V +LPG+G +   K  +L I+TC +LQ +++ +LQKEFGPK G  LY+FCRG DDR ++ E ERKSVSAEINYG+RF + +E + F+  LS+E+ +RL+    KG ++TLK+M+RK  A ++ AK+ GHGICD+ ++ V+L + T +  +I K  +++  T K+  SD+RG+GI + +L  ++
Sbjct:  347 NFISNFYSHSRLHHISMWKCELTEFVNTLQRQSNGIFPGREKLKKMKTGRSALVVTDTGDMSVLNSPRHQSCIMHVDMDCFFVSVGIRNRPDLKGKPVAVTSNRGTGRAPLRPGANPQLEWQYYQNKILKGKAADIPDSSLWENPDSAQANGIDSVLSRAEIASCSYEARQLGIKNGMFFGHAKQLCPNLQAVPYDFHAYKEVAQTLYETLASYTHNIEAVSCDEALVDITEIL-AETKLTPDEFANAVRMEIKDQTKCAASVGIGSNILLARMATRKAKPDGQYHLKPEEVDDFIRGQLVTNLPGVGHSMESKLASLGIKTCGDLQYMTMAKLQKEFGPKTGQMLYRFCRGLDDRPVRTEKERKSVSAEINYGIRFTQPKEAEAFLLSLSEEIQRRLEATGMKGKRLTLKIMVRKPGAPVETAKFGGHGICDNIARTVTLDQATDNAKIIGKAMLNMFHTMKLNISDMRGVGIHVNQLVPTN 828          

HSP 2 Score: 112.464 bits (280), Expect = 1.796e-25
Identity = 55/103 (53.40%), Postives = 75/103 (72.82%), Query Frame = 2
Query:  119 SNIFNEVSIWVNGYTEPSSDELRKIMGEHGGKYQHSFSKTYVTRVIATNLPDSKIKNLKRNDKVVRPNWIVDSLKAGRLLSIDKYLLYSVNKRDGNVLSFQSL 427
            S IF+ V+I+VNGYT+PS++ELRK+M  HGG+Y   +S++  T +IATNLP++KIK LK  +KV+RP WIV+S+KAGRLLS   Y LY+        LSF  +
Sbjct:   46 STIFSGVAIYVNGYTDPSAEELRKLMMLHGGQYHVYYSRSKTTHIIATNLPNAKIKELK-GEKVIRPEWIVESIKAGRLLSYIPYQLYTKQSSVQKGLSFNPV 147          
The following BLAST results are available for this feature:
BLAST of TCONS_00007320 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
REV13.800e-10740.58DNA repair protein REV1 OS=Homo sapiens GN=REV1 PE... [more]
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