TCONS_00007258 (transcript) - C. hemisphaerica

Overview
NameTCONS_00007258
Unique NameTCONS_00007258
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length2757

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00007258 ID=TCONS_00007258|Name=TCONS_00007258|organism=Clytia hemisphaerica|type=transcript|length=2757bp
TAGTATAGTATACAACAAATAAAGATGTATTCATTCTACTAACTAACAAA
ATGGAATTCAACTCGCTCAAGAAAAATACGGAAAATGACTTCAATGATTA
TGGTATCGTTTATTATCGTGAGAAGCGAAAATTGGTTTCTCCACCGGGTT
ATGAAACTGATCCAAACAAAAGGCGAAGGgctgaagaaagaaaaataccC
ATTTCGTTATCAGTTGATGGGTCGTTACTCAAGATGTGTTTCCGATATAT
TTCACTGAATCTGAGCATCCTTGACTCTCTTGTTGGAATGCCAGAAATCA
TTGGGAAAGAACTGTTTaattttatgctaaaaaatcagattttgaCTTTG
GAAAATGTGCCCTATGAGcctaaaaataaagaagatgaaaataaacttCA
CTGTCTGATGGTTTTTAATGAGGCTTTTGGGtatcaaattatttcaaatt
tatccctGAAACACTCACCAAAGATAATGCCATATCTTTCAGATTTCctg
atttgttttgataatgtgAGAGAACTGGATTTGACTGGAAACTCTCTCAA
TGATTCTGCACTCAGCACTTTTCACAATTTAACGTGtttggaaattttga
tagTGGCAGAATGTGGACTGTGCGATTTCTcaatcaaaaagttttcattg
cCATATAGGCTCTTTGATAATGAAAATATTACATTGGAATTTCTAGATTT
GAGAGATAACAAAGAAATCACGTCTAAATCTTTGGAGAATTTATTTGGTT
TTCCActgttgaaaaagttgaatctTTCTAATACAGGAATCAAGAAAATC
AATTTGGACTCTAAAAAGCTTGAGAAGTATAACTTTGATTACAAGCAATC
TCTGCAGACATATAAAGAGGTTGAAACTACTGGATGGGCTAAACCGATtg
tcgaaaagattttgttcaaTGGCCAATCAAAATCAAGTGGAAGTAGTAGT
TTCGCTAAAAAGACATTATCTTTTTattCCTTGGCGAAGAAGAAACAAGA
GGTTGATAAACAAACAAGTTCTTCTTTAACGAAAAGTATCACCAGCCCTC
TCTTCCTCGTTCGCAAAGACATTAAAGAACAGACATCTCAGAAAGCACGT
TCGCCACTCGCTCCATCATCACCAACACCTAATGAAGGACgaacgaaaaa
gaagaaagcgattttctttgacgaagaagaagatgaagataaTATGCTTA
TGCAATACTCAAGATGAGCAGTCATTCAAACTTTACCGATAATATAATGC
AGATTCGGACTGGTCAATAGTGGAGTCCGAGCATCTATCCAATCGACCAT
TCTCCAAAAGAAGAAAGGAGCAAGTCATTGGTATGACAGTGTTACAGAAC
CTCTTTTTGATGAAGGGAATGCCAATATTCATACTATGAGAGAAGGCCAG
TTCATTGATGAAATACCTACCTCTAAATATTTCTCACATAAAACAAACTC
AAATCTACTATCACGAAGACAAAAAGGTCCAATATTTCATCATGTCACAC
CACACATAAAACCATCATCTTCACATGTATCACGTGGCAGGTTTTTAACA
AATCAGGAGCAATCACATGAGTCACGTGCCAAACTTTTGACCAATCACGG
ACCGTCTGAATACGAAACACCAATAACATATCAGCAAGTCGGTAAAGGCC
TTCAAAAATCATTGCTGGGTCAGAAATGGCTGAAAGAGAACGACTTCAAA
TTATCGGATTTCGGTCTTTCAGAGGACGCCCATTCAGCATTGGATGATGT
CCCGGTTTATCCAGTCGATGGTAGTGTAGAGGGAGCTTTAACAAAATCAT
ATTCTAACAACCTTTTATCAAGCCTTGGTGTAAACGAACCACAAATGTCA
TCCTTGGCTACACCCAAACAAATCAATGCTGCAGTCTCGTCCAATAAGCG
TCACCATGCTAAGAAACTCGattcaacaacaaacaaacatttagagaaaa
ttctaaatttgaTATCTTTGGTGAAAGATTTTTCTCACACGTATGACCAA
GAAAGAAAGTTGGCTTCTACGTTGCACCACCAACGCCATTTGATGGTACC
AGAGCTGCGTCCACCGGAAGTAATCACTAGCAGTGAACATGTAGCTGAAG
AGGAAACAGCTGCAAGTGATAGTGAAGCCAAATGGAAAGGTGACGTCATC
CAAAATGCTGCGAAACTCAAAATCAACAACGCTTATCATAAGAGTTTGAA
AACAGCTCCAATATTAGATCCTGATCTTCATCATTTAGTCACTGTTGATA
CAACTACGGGGGAGATTTTTAACGAGCGAACTCTCCCTCGAGAGGCATTA
GCCAAATTTGGTTTAGGCAGTTCTCCAGTTATTAAAAAGACTTCTATGGG
TTATGTGCCTAAAAAAGTGAAACGTAAAACTACGGTATCGAAAGGTACAC
GGCGTGCTCACGTTATAGTTACAAAACCTACTCCCCGTATTTTACGTAAC
ATAACCAATAGACGTAAGACGTCGTTACGTGCTAAAGCTGCAAGAAAACT
GACATCGAGAAACGAAATGATGACAGAAATTAGAAAGGACCTTTCTTTTG
TCGATGATAAACAACTCCTGAAATTGGAAAATACTTTAGAAAGTATTAAG
CGCCTTAAAAAGATCCATTGAGATTTATTTTATTAAAGTTTTTTATGTTA
GTATATTTGTTGTACATAATtaatatttttcgttttcaattttatttttt
ttgaagtaTTGGAAATTGCAACTTCATTCCTTACACCATTGACTATATTT
TAATGAC
Run BLAST on NCBI

protein sequence of TCONS_00007258-protein

>TCONS_00007258-protein ID=TCONS_00007258-protein|Name=TCONS_00007258-protein|organism=Clytia hemisphaerica|type=polypeptide|length=411bp
MREGQFIDEIPTSKYFSHKTNSNLLSRRQKGPIFHHVTPHIKPSSSHVSR
GRFLTNQEQSHESRAKLLTNHGPSEYETPITYQQVGKGLQKSLLGQKWLK
ENDFKLSDFGLSEDAHSALDDVPVYPVDGSVEGALTKSYSNNLLSSLGVN
EPQMSSLATPKQINAAVSSNKRHHAKKLDSTTNKHLEKILNLISLVKDFS
HTYDQERKLASTLHHQRHLMVPELRPPEVITSSEHVAEEETAASDSEAKW
KGDVIQNAAKLKINNAYHKSLKTAPILDPDLHHLVTVDTTTGEIFNERTL
PREALAKFGLGSSPVIKKTSMGYVPKKVKRKTTVSKGTRRAHVIVTKPTP
RILRNITNRRKTSLRAKAARKLTSRNEMMTEIRKDLSFVDDKQLLKLENT
LESIKRLKKIH
Run BLAST on NCBI

transcript from alignment at sc0000075:451746..463485+

Legend: exonfive_prime_UTRCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00007258 ID=TCONS_00007258|Name=TCONS_00007258|organism=Clytia hemisphaerica|type=transcript|length=11740bp|location=Sequence derived from alignment at sc0000075:451746..463485+ (Clytia hemisphaerica)
TAGTATAGTATACAACAAATAAAGATGTATTCATTCTACTAACTAACAAA
ATGGAATTCAACTCGCTCAAGAAAAATACGGAAAATGACTTCAATGATTA
TGGTATCGTTTATTATCGTGAGAAGCGAAAATTGGTTTCTCCACCGGGTT
ATGAAACTGATCCAAACAAAAGGCGAAGGgctgaagaaagaaaaataccC
ATTTCGTTATCAGTTGATGGGTCGTTACTCAAGATGTGTTTCCGATATAT
TTCACTGAATCTGAGCATCCTTGACTCTCTTGTTGGAATGCCAGAAATCA
TTGGGAAAGAACTGTTTaattttatgctaaaaaatcagattttgaCTTTG
GAAAATGTGCCCTATGAGcctaaaaataaagaagatgaaaataaacttCA
CTGTCTGATGGTTTTTAATGAGGCTTTTGGGtatcaaattatttcaaatt
tatccctGAAACACTCACCAAAGATAATGCCATATCTTTCAGATTTCctg
atttgttttgataatgtgAGAGAACTGGATTTGACTGGAAACTCTCTCAA
TGATTCTGCACTCAGCACTTTTCACAATTTAACGTGGTGAGTATTAaacc
aaaatttaatttataaatcataGCTGAGCTGAACTTGGCCAGGAAAAATG
GGTACCGGATTATGTGTGAGCCATAagcataagggtccctttttcacacc
ctcgaaagtccctTGAAAGGGGtttaaaaaccattaaaaagcaatttatt
ctctgtaagggttccaaaattatgaaaatcaaaaataaactcCCACAATT
TTGTGGAAATAGCCTCTCCAAGGTTCATTTTTTTGCAAGTCTCTGATATC
TTGTAGgttacatgctttttttataagaataactttataagaatgtccat
gatgaaaattgccaaaatttagaataatgctaagaatattgccatcatgg
aattttacaattcaagctaagaatgcaattttagagcattttcaattata
aattgtcaattaccttCAActcaagtaaggctcactcctttcacaaaaat
gccattttaagcTTGAGACATAATATATATGTACTAAacgttaaatctag
tctgaattacgatcctaacctaagaatgctgtaagaatattttaggatga
ttttctcaAGAAAGTTAATAATATCCATGATAAAATAGATTTACAccatt
gttataaaaaaagtgtgtatgttATATATATTACAGTGTCTCAAAGGGTC
CCTAAAATCACAATAGTCAGTTTCTCAAAGGTTCGAACCCTCTACTCCTA
ATTCAGACATACCGCCCCTCATCctgcaaacctagtaccccctggGTATA
TTTTTAGGTTAGGGTCCAACTTAGCCTAAATCTagcatgtaatacatacc
tcaagcaaaaatttggcatttttctgaaagcttttagcattgctggggga
tatataattggcaatttatagataaaatgctctaaaaaattGGCATTCGT
AAGTTCAATTGCCCAATTCCATGAGGGTGTTATTCTCagaatattcttaa
tttttctgcaaatttcatcatgaatattcttataaagtgtattcttataa
aaaaagcaacaCCTGAAAACCTAAATTCTCAAATAGGGTGAAAAATCAGA
TGTATATAAACTCATTTTTACTGCATCAACTTTTAAGGGTTGGTTATTTG
TTTACCTGTTTATTTTTATACGATACTGTAAGGTGTTGTGATTAGTAATA
TGGTGTGACTATTTCTTCTCTATCCTCTTTtagtttggaaattttgatag
TGGCAGAATGTGGACTGTGCGATTTCTcaatcaaaaagttttcattgcCA
TATAGGCTCTTTGATAATGAAAATATTACATTGGAATTTCTAGATTTGAG
AGGTATTGTTCCAGCTGCTGAATTAAATTCTTTATTAAATTTACACCTTT
TTATCATCATTGGCATCGTAATGAACATCTAACAAACATTAACCGTTCTT
GAAATGCACAGATTCACAGATTCTTTCAATAGTGTTCTATTCCATCTTAT
AGTAATAAAGGGGGACTTAAAAATTTATAGTTCTTTTACTAATgaccatg
ttgaataatttaatttttaaatttaaactcaaggtctcaaataaaaatac
cagtactttgaaaaaatgtattCTTCTTAAATTTCTGTTTATTTCATTCT
CGTAGATAACAAAGAAATCACGTCTAAATCTTTGGAGAATTTATTTGGTT
TTCCActgttgaaaaagttgaatctTTCTAATACAGGAATCAAGGTATTt
atgtttgaaaaattgaaattaaatccGACAGAAGCGACTtagttttacac
gtttttttataagaacataatttttgaagcctttggaagttcttaacttt
ttgagttttaagcataaaaatgttcttaacatgttcttaatttgaccatt
ttgtgagtatttttgaccattttcctaagaaaaagggtgtttttgagtcc
acaaagccttaaaatgttctttacttgcTCTTAatgttttggccatcgaa
gccttatgttcttatatagtttgttcttataaaaaaacgtgtattggtaa
taattcaaaattcaaaactgaatatttatttaaacttttttcaatttaaa
caAATAACATGAAGTCGCTTCTGttaatgaattttattttgaaatttccc
aatTCAGGATAAACTTTTATGTTCCATATTATTAATGATTTCAAAGTTTC
TTAATGTCaataaatattgtttttttgaataaatttactGGTTTTCAAGA
GTTAATTTCtcttaatttaattttcttttgactttaTTCTTTAGAAAATC
AATTTGGACTCTAAAAAGCTTGAGAAGTATAACTTTGATTACAAGGTATT
TCAATATAAGATCTCAACTTTTGTCTTATTTTCTACTATATAAATGTTAC
TTTCTTCGGCGTTAGTTTCTAGGCCTataaatacaaataaaataCAATAT
CCTATCCTTTTTTCATAGCAATCTCTGCAGACATATAAAGAGGTTGAAAC
TACTGGATGGGCTAAACCGGTGagtataatttatttttgaaaacataaaT
GATATCCTCCGCggttttttgaaaactcaaactCAGGCAAACCCATTTTC
CCATCAGCGCTAAAAGAACTGGTACAATGCTACTCTTTTTTTCACGTTTG
TAGTCGATTTACATGAATCAATTTCAAAGCTTCTTAAAATTGTACTTTTA
AAGGGATATTCAGCAGATTATGGTTATAGAGTGACTCACAAGttgctgct
ttcatgcattttgctacccagaatctgagaaaatcagcctttttagcttg
aaattgaaacattgagcgatctcgctggggttattttgtctttttatgtt
gaatattagtataagacaccatttagaaaccattttgaccctttcatAGT
CTtcaaatgggcaaaaaatgccatttttactcatttttcgctttagtgcg
aatcaaagacccccctggggaatgctggattttttacctaggaggttaaa
tattgcgcaaaatgtcttacaatagattaaattttcacaaaaatatacta
cactttgaattttttgacatcatgctaaaaatggtagttgacgatctacc
ctatcATAACAAGAAGAAGTCTCGCTTACACTATGGAAAAGCCGCGATTT
GAATATTGCGAGCGtcttttttgctcagaattaaCCATTCAATGATAAGA
AATGAAAATACCTTCTTAATTGGGTGAATTGCGCCAAATCTGTACCGTGG
TTTTGTAAACAAGGCAAACTGTATTCAAATTACCATAGAAGTGGATGTGT
TAGGTATTAGAGCTTATTAAGTTTTTGGATTTGGTACTCTGGTAGAAAGT
ATCAGTCAGGACTAAGtcagtttttgatattttagttGTAACACCTAACA
CATCTACTTCTatggtaatttgaagacagttAGTCTTGTTTACAAAACCA
CGGTACAGATTTGGCGCAATTCACCCAATTCACTGCTTAcagtaatttat
ttatttatttttttttttttttttttttttttttttttttttttaNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNAACTGAGTCTGATGTT
TTGATCTCATTGGGCAATCTATTCCAAGCCTGTCCTGCCCGATAGTTGAA
GGAATTCAAGCAAACTGCATTTTTTGGTAGCGGAAGTTTGATTTGAGCGC
CTCTTCTGGATGTTGGGGGATGTTGGGAATCCTCATCCTCAACATCACTC
CCTGATTTATGCTGGATAATTTCAAACTGATCCCAGCCTAGTTTATTTCC
TATTTTATTTACGCTCTTATAAACTTCCACTAACataagttggagatttt
gaGTGTGAATAGACGCACAATCTGCTTTGACCAGTAGCTCGTCATAATCA
AGATGGACAAGATTTTCTTTTGCCCTAAGGGCCCTGCAATGAGCTNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTGAGGCACTCCAAATAGCA
AAGGTAGCCAGTTACTGTAAGATGATCCCACCCTGACCCTGTGTTTCCTT
TTTGAAAGATAGCTATGTATGAAGGCGAGACTTCTACAATCCAATCCATA
TGCATGAAGTTTGGCGATCAGAAGATCATGGGGTAAGCAATCAAAGGCCT
TTGAAATGACATTCGTGATTCCAGGAGGTTTTGAAGATGGgatttttgtt
cttttgctatgCATACAATACAGTATGTTTGGTTTGAAATAGGCTGTCAA
AATTATATTACTATTTAGATtgtcgaaaagattttgttcaaTGGCCAATC
AAAATCAAGTGGAAGTAGTAGTTTCGCTAAAAAGACATTATCTTTTTGTA
CGTATTATTGTCacaatatacaatttttttgtataagaacataaagaaAA
TGCTAAATCCTCAGATGTTATTAACCAATTGGATTTTTAACCTAGCATGT
TTGTAAAACGTTCAACATCAGCAATTTCCagtatttttttgagaattttg
gtgTGATTATCTTAAGAATTTTGCATGTCCCAAAAGCCCTAGAATGTTTT
ATAATTTATATTGAATTTTCGGCCTCAAAGCCTTGAGtccttataaaata
aaagttcaaaaagaaaaagattcaaCTGCACAAATACCTGTTTCGAAATT
CGTTgtgctttttttcaaaatgagacTTCGTTGAATGCTATGTTATTCTT
CTTTTTGGAAGAAGTACCctaatgtgtttttttttagattttaagctaaa
atgTGTCGGTTTTCAACGAGTGTTCTGGTTTTGTAAATAAATAATTGTGG
ACATTCTCCAATGATTTGACATAAGAGAACGACCCTGTTTAAGCTAAATA
ATATAGTTACAggttatttttataatttttagattCCTTGGCGAAGAAGA
AACAAGAGGTTGATAAACAAACAAGTTCTTCTTTAACGAAAAGTATCACC
AGCCCTCTCTTCCTCGTTCGCAAAGACATTAAAGGTATACGTGAAAAACT
AAGGAATTCATGATTTTCATGacgtaatacacttttttttataagaacaa
tttaataagaacaatgaggctcaaaatcgtcaaaaaaaagaacaatttta
agaacaatgctgatcctgaaattactcaatttcaagtaatttaggggtca
aagaagtaaaaatttggtataacgcctaagctctagtttagacggccgac
tttctgccctgcctattctaattgttagagtaggcagaaagtggGCGTAA
AGTTGGCAATTAAAACCTTTGCtcggaaaagattgaaagaaaacattatt
cattaacgtcaaaagagggcaatgcattgactttagacagccaactatca
gtccactttaattcacaattagaataggcagggcgaaaagtgggccgtct
aaactagagctaaaatacctcaatttacaattacaccctataaataagaa
caggataagaacaattcgaggctcaaattgccaaaaaagtaagaacaacc
gagcctcagcaaaattttactgtTTCTTATacctataaaaaaaatttcta
cgGATTTTGTCAgaagtgtcaaattttattttctctaGCTTAAATTTACC
GCTGCTAAAAAATTGGGTGtttccatagaaaacattacgtcatgaatata
atGAATATAGATATTATTATTCAAAGTCTTCCTTCCAAACACAAAGAACA
CAAAATGTTACTATATCAATGTGTTTAGTTTTACTGGCTAAGTACAAGCT
CGATTtagataattttggttattcgATTAGGTTAGGAACATGGGAGACTA
GCCAGCAGTCAAACCATGCATCGTGAATTTTCTGATTTGCTCTTAGCATC
TTTAACTTCATTAAAATTTATTAAGAGGCTCGAAAGAATAAAACGTGTAG
CCAAAATGCCAAATGGCACAATCCTGGACAGAACTGTTTGTCCACTCCTC
TCCCAATTTCAATGTTGATAGTGGAGTCTTGTGAACGTGCAAAAATTCGG
CTCAAACATTGATTTTGAGGGGATACGGAGGAAAAGGGTCATCGGACGTT
AGTTCTACCCATGATTGAAATCAGAAAACCTATGCAATTCTATTACATTC
GGTGGTCATCTTTAGTTAGAGGAAAGCGTTCTTTCCAAGTTTAGATTTTA
GGTGCGGTGCCCTTTAAAGGGTGGTTCTCATCATAGGAAATAtggtaccc
cccccccaccgTTCAATATAACCTATCACACGTccatttttcataatttc
tcAGTAGAACAGACATCTCAGAAAGCACGTTCGCCACTCGCTCCATCATC
ACCAACACCTAATGAAGGACgaacgaaaaagaagaaagcgattttctttg
acgaagaagaagatgaagataaTATGCTTATGCAATACTCAAGATGAGCA
GTCATTCAAACTTTACCGATAATATGTAAGGAGGTTACTTTTTGATTCCT
TCAGTAATACTTTAGgcatacaaactttcgcgaacagaaCCTTTACGAGG
CCGAAAAATTGCGTAATCTACAACATTTACTTCCGCGAATTTGACAAAGA
aagtttttcgcgagcataaactttcgcgaatgaggTATATTTTTAGTAGA
AAATTCAAGTTTTCGGTGCATGAAACAGGGGCTgcggctccactttgaaa
gtgGTTGGGCCATGgtttagtgtctaaggaggtgCCACCGgttggcgccg
acgggagaaatttttgaaaattagccctTCCAGAATGCCTAAAACAggtc
tttttcaaggttttttacacaaaccgctggggggccccaTCTATGGGAAC
AGAATACAGAGAGAGATTTACTTTGAATGAATCTactaaattttaaaatg
ctATGAACAGTTTTCTTAATTGCTAAACAATTGAATTTAAGTTTATTcag
aaaatgagtaaacaaTTGGATATTTGTACACATTAaactcttttgtttta
tttgattttcctttttgttcGTTTTTGATCAAATCTTTAATAATGTAAAT
TGGAAGAATTTCAATGATGATGgattttaaaatgtaaacaataaACAAAC
ATGTCAATAATGAAGAGTATATTTTTGACACTTTGGATTTTGCAATTAGC
AGGTTAAATTATGTTTCCTTTGTAATTTTCAACCTAGATATTGAAATagt
aatacacatttttttataagaacaagcctTCGCTTGTTCTTGACTTcttg
agatttaagcctaagaatattcttaacatgttcttattttcaccgtttcG
TGAGCATTTtcgtccatttttctaagaaatcgggtgttttagagtccgca
aagccttcagatattcttaacttgctcttagtATTTTGGGCAGACCCATG
TTCCTTTatagcatgttcttataaaaaggattatctcgatagtttttgtt
tttcagattaagaatttgaatttgaagtaATTGTGGCTTTAAAAGTACAa
ggttactcttaggtgccaaataaccccccccccccccgcttgttaatttt
tcgatttttttccacccccccccNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNCCC
CCCCCCCTCGTTTATTTGGCACCAAAGAGTAATCGAAAGTCTATTTGAGT
AACCCAGTACTATTTTCTCTTTATTCAGAATGCAGATTCGGACTGGTCAA
TAGTGGAGTCCGAGCATCTATCCAATCGACCATTCTCCAAAAGAAGAAAG
GAGCAAGTCATTGGTATGACAGTGTTACAGAACCTCTTTTTGATGAAGGG
AATGCCAATATTCATACTATGAGAGAAGGCCAGTTCATTGATGAAATACC
TACCTCTAAATATTTCTCACATAAAACAAACTCAAATCTACTATCACGAA
GACAAAAAGGTCCAATATTTCATCATGTCACACCACACATAAAACCATCA
TCTTCACATGTATCACGTGGCAGGTTTTTAACAAATCAGGAGCAATCACA
TGAGTCACGTGCCAAACTTTTGACCAATCACGGACCGTCTGAATACGAAA
CACCAATAACATATCAGCAAGTCGGTAAAGGCCTTCAAAAATCATTGCTG
GGTCAGAAATGGCTGAAAGAGAACGACTTCAAATTATCGGATTTCGGTCT
TTCAGAGGACGCCCATTCAGCATTGGATGATGTCCCGGTTTATCCAGTCG
ATGGTAGTGTAGAGGGAGCTTTAACAAAATCATATTCTAACAACCTTTTA
TCAAGCCTTGGTGTAAACGAACCACAAATGTCATCCTTGGCTACACCCAA
ACAAATCAATGCTGCAGTCTCGTCCAATAAGCGTCACCATGCTAAGAAAC
TCGattcaacaacaaacaaacatttagagaaaattctaaatttgaTATCT
TTGGTGAAAGATTTTTCTCACACGTATGACCAAGAAAGAAAGTTGGCTTC
TACGTTGCACCACCAACGCCATTTGATGGTACCAGAGCTGCGTCCACCGG
AAGTAATCACTAGCAGTGAACATGTAGCTGAAGAGGAAACAGCTGCAAGT
GATAGTGAAGCCAAATGGAAAGGTGACGTCATCCAAAATGCTGCGAAACT
CAAAATCAACAACGCTTATCATAAGAGTTTGAAAACAGCTCCAATATTAG
ATCCTGATCTTCATCATTTAGTCACTGTTGATACAACTACGGGGGAGATT
TTTAACGAGCGAACTCTCCCTCGAGAGGCATTAGCCAAATTTGGTTTAGG
CAGTTCTCCAGTTATTAAAAAGACTTCTATGGGTTATGTGCCTAAAAAAG
TGAAACGTAAAACTACGGTATCGAAAGGTACACGGCGTGCTCACGTTATA
GTTACAAAACCTACTCCCCGTATTTTACGTAACATAACCAATAGACGTAA
GACGTCGTTACGTGCTAAAGCTGCAAGAAAACTGACATCGAGAAACGAAA
TGATGACAGAAATTAGAAAGGACCTTTCTTTTGTCGATGATAAACAACTC
CTGAAATTGGAAAATACTTTAGAAAGTATTAAGCGCCTTAAAAAGATCCA
TTGAGATTTATTTTATTAAAGTTTTTTATGTTAGTATATTTGTTGTACAT
AATtaatatttttcgttttcaattttattttttttgaagtaTTGGAAATT
GCAACTTCATTCCTTACACCATTGACTATATTTTAATGAC

Coding sequence (CDS) from alignment at sc0000075:451746..463485+

>TCONS_00007258 ID=TCONS_00007258|Name=TCONS_00007258|organism=Clytia hemisphaerica|type=CDS|length=1236bp|location=Sequence derived from alignment at sc0000075:451746..463485+ (Clytia hemisphaerica)
ATGAGAGAAGGCCAGTTCATTGATGAAATACCTACCTCTAAATATTTCTC
ACATAAAACAAACTCAAATCTACTATCACGAAGACAAAAAGGTCCAATAT
TTCATCATGTCACACCACACATAAAACCATCATCTTCACATGTATCACGT
GGCAGGTTTTTAACAAATCAGGAGCAATCACATGAGTCACGTGCCAAACT
TTTGACCAATCACGGACCGTCTGAATACGAAACACCAATAACATATCAGC
AAGTCGGTAAAGGCCTTCAAAAATCATTGCTGGGTCAGAAATGGCTGAAA
GAGAACGACTTCAAATTATCGGATTTCGGTCTTTCAGAGGACGCCCATTC
AGCATTGGATGATGTCCCGGTTTATCCAGTCGATGGTAGTGTAGAGGGAG
CTTTAACAAAATCATATTCTAACAACCTTTTATCAAGCCTTGGTGTAAAC
GAACCACAAATGTCATCCTTGGCTACACCCAAACAAATCAATGCTGCAGT
CTCGTCCAATAAGCGTCACCATGCTAAGAAACTCGattcaacaacaaaca
aacatttagagaaaattctaaatttgaTATCTTTGGTGAAAGATTTTTCT
CACACGTATGACCAAGAAAGAAAGTTGGCTTCTACGTTGCACCACCAACG
CCATTTGATGGTACCAGAGCTGCGTCCACCGGAAGTAATCACTAGCAGTG
AACATGTAGCTGAAGAGGAAACAGCTGCAAGTGATAGTGAAGCCAAATGG
AAAGGTGACGTCATCCAAAATGCTGCGAAACTCAAAATCAACAACGCTTA
TCATAAGAGTTTGAAAACAGCTCCAATATTAGATCCTGATCTTCATCATT
TAGTCACTGTTGATACAACTACGGGGGAGATTTTTAACGAGCGAACTCTC
CCTCGAGAGGCATTAGCCAAATTTGGTTTAGGCAGTTCTCCAGTTATTAA
AAAGACTTCTATGGGTTATGTGCCTAAAAAAGTGAAACGTAAAACTACGG
TATCGAAAGGTACACGGCGTGCTCACGTTATAGTTACAAAACCTACTCCC
CGTATTTTACGTAACATAACCAATAGACGTAAGACGTCGTTACGTGCTAA
AGCTGCAAGAAAACTGACATCGAGAAACGAAATGATGACAGAAATTAGAA
AGGACCTTTCTTTTGTCGATGATAAACAACTCCTGAAATTGGAAAATACT
TTAGAAAGTATTAAGCGCCTTAAAAAGATCCATTGA
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_004078XLOC_004078Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00007258-exon-sc0000075-1491911889:451746..452331TCONS_00007258-exon-sc0000075-1491911889:451746..452331Clytia hemisphaericaexon
TCONS_00007258-exon-sc0000075-1510915933:451746..452331TCONS_00007258-exon-sc0000075-1510915933:451746..452331Clytia hemisphaericaexon
TCONS_00007258-exon-sc0000075-1575043694:451746..452331TCONS_00007258-exon-sc0000075-1575043694:451746..452331Clytia hemisphaericaexon
TCONS_00007258-exon-sc0000075-1491911889:453529..453647TCONS_00007258-exon-sc0000075-1491911889:453529..453647Clytia hemisphaericaexon
TCONS_00007258-exon-sc0000075-1510915933:453529..453647TCONS_00007258-exon-sc0000075-1510915933:453529..453647Clytia hemisphaericaexon
TCONS_00007258-exon-sc0000075-1575043694:453529..453647TCONS_00007258-exon-sc0000075-1575043694:453529..453647Clytia hemisphaericaexon
TCONS_00007258-exon-sc0000075-1491911889:453951..454039TCONS_00007258-exon-sc0000075-1491911889:453951..454039Clytia hemisphaericaexon
TCONS_00007258-exon-sc0000075-1510915933:453951..454039TCONS_00007258-exon-sc0000075-1510915933:453951..454039Clytia hemisphaericaexon
TCONS_00007258-exon-sc0000075-1575043694:453951..454039TCONS_00007258-exon-sc0000075-1575043694:453951..454039Clytia hemisphaericaexon
TCONS_00007258-exon-sc0000075-1491911889:454590..454640TCONS_00007258-exon-sc0000075-1491911889:454590..454640Clytia hemisphaericaexon
TCONS_00007258-exon-sc0000075-1510915933:454590..454640TCONS_00007258-exon-sc0000075-1510915933:454590..454640Clytia hemisphaericaexon
TCONS_00007258-exon-sc0000075-1575043694:454590..454640TCONS_00007258-exon-sc0000075-1575043694:454590..454640Clytia hemisphaericaexon
TCONS_00007258-exon-sc0000075-1491911889:454764..454814TCONS_00007258-exon-sc0000075-1491911889:454764..454814Clytia hemisphaericaexon
TCONS_00007258-exon-sc0000075-1510915933:454764..454814TCONS_00007258-exon-sc0000075-1510915933:454764..454814Clytia hemisphaericaexon
TCONS_00007258-exon-sc0000075-1575043694:454764..454814TCONS_00007258-exon-sc0000075-1575043694:454764..454814Clytia hemisphaericaexon
TCONS_00007258-exon-sc0000075-1491911889:458564..458642TCONS_00007258-exon-sc0000075-1491911889:458564..458642Clytia hemisphaericaexon
TCONS_00007258-exon-sc0000075-1510915933:458564..458642TCONS_00007258-exon-sc0000075-1510915933:458564..458642Clytia hemisphaericaexon
TCONS_00007258-exon-sc0000075-1575043694:458564..458642TCONS_00007258-exon-sc0000075-1575043694:458564..458642Clytia hemisphaericaexon
TCONS_00007258-exon-sc0000075-1491911889:459178..459279TCONS_00007258-exon-sc0000075-1491911889:459178..459279Clytia hemisphaericaexon
TCONS_00007258-exon-sc0000075-1510915933:459178..459279TCONS_00007258-exon-sc0000075-1510915933:459178..459279Clytia hemisphaericaexon
TCONS_00007258-exon-sc0000075-1575043694:459178..459279TCONS_00007258-exon-sc0000075-1575043694:459178..459279Clytia hemisphaericaexon
TCONS_00007258-exon-sc0000075-1491911889:460553..460720TCONS_00007258-exon-sc0000075-1491911889:460553..460720Clytia hemisphaericaexon
TCONS_00007258-exon-sc0000075-1510915933:460553..460720TCONS_00007258-exon-sc0000075-1510915933:460553..460720Clytia hemisphaericaexon
TCONS_00007258-exon-sc0000075-1575043694:460553..460720TCONS_00007258-exon-sc0000075-1575043694:460553..460720Clytia hemisphaericaexon
TCONS_00007258-exon-sc0000075-1491911889:461974..463485TCONS_00007258-exon-sc0000075-1491911889:461974..463485Clytia hemisphaericaexon
TCONS_00007258-exon-sc0000075-1510915933:461974..463485TCONS_00007258-exon-sc0000075-1510915933:461974..463485Clytia hemisphaericaexon
TCONS_00007258-exon-sc0000075-1575043694:461974..463485TCONS_00007258-exon-sc0000075-1575043694:461974..463485Clytia hemisphaericaexon
The following polypeptide feature(s) derives from this transcript:
Feature NameUnique NameSpeciesType
TCONS_00007258-proteinTCONS_00007258-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000075supercontigsc0000075:451746..463485 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
3.71535	4.49927	4.49419	0.875462	0.399036	0.647345	0.336716	1.90333	0.301624	0.793545	0.45966	0	1.16652	0	1.53278	0.241833	1.10686	1.57426	2.37406	0.368369	0.789626	1.74281e-07	2.99239	2.12528	1.01453	0.69718	0.010257	2.84799	2.35629	3.31505
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00007258 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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