TCONS_00007255 (transcript) - C. hemisphaerica

Overview
NameTCONS_00007255
Unique NameTCONS_00007255
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length985

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00007255 ID=TCONS_00007255|Name=TCONS_00007255|organism=Clytia hemisphaerica|type=transcript|length=985bp
TCCCGATTAACCGAAAGCGGATTATATTTTCCCGAAAATTTATATTCCcg
caaaaaaactttcttgacGATTCCATGTGCgtcatttgataaaaaactcA
AAAGTGAAAGCCAGTTTTCCAGAGTTTTCTCAAAATACCACATTTTTAAT
ACTTTGATCAGAACAGAGACAATGGCTGAAGGAAATGTTGAAATAATTAC
TGAGCTGAAAAATGATGTTCAAGAACTGGAGAAGATTTTATCAAGTGTAA
TCAGAAGTAATGTTCGTCAAATTATTGTTCAGTCCATATCTTCACTGAAA
TCACAAATAGAAAAACTTGAAGCTGAAAAAGCCAAAGCCCAAGCAGCATC
CAAAGCGCCATCAGATGAAAAAAGTAGCACCAAACCTATCTACACAGTAA
AGATTTCTACATACGGTTTTGATGAGTCGagtaaatttgtcaaaatttat
gTCAGCATTAAAAACGTAGAAAAGATTAAAGATGATCAAATTATCTTCAA
AACAACCGAGACTTCAATGAAAATGACAGTGCAAAATCACATGGATCGCC
ACCACGTTCTACATATCCAGAGACTGGCACATCCAATCAATACCACTGCT
TGCACTTGTAAAGTAAAAGCCGGTAATATTGTGATAGCACTTCGAAAAGC
AGAGGACGGTCAGACATGGGGTGGAATGACTGAAGCACAACGCAAAGATA
AAGAGGCAAAGGATAGTAAATTCAACTCGAGCACGCCTTCAGACGCGAAC
GAAGATCCACAAGCGGGCATCATGAACTTGATGAAGAAGATGTATGATGA
TGGTGACGATGATATGAAAAGAATGATCAAGAAGACTTGGTATGAATCTT
CGCAAAAACAAGGCGGTGCAGGTGCTGGTGGTATGCCAGGAATGCCCGGT
ATGCCTGGTATGCCTGGATTGTAACAAAATATAGGTTCAGAAttgaagaa
aagagaaaaagatatCAAATATTCAGAAAGAAAAA
Run BLAST on NCBI

transcript from alignment at sc0000075:335394..347379+

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00007255 ID=TCONS_00007255|Name=TCONS_00007255|organism=Clytia hemisphaerica|type=transcript|length=11986bp|location=Sequence derived from alignment at sc0000075:335394..347379+ (Clytia hemisphaerica)
TCCCGATTAACCGAAAGCGGATTATATTTTCCCGAAAATTTATATTCCcg
caaaaaaactttcttgacGATTCCATGTGCgtcatttgataaaaaactcA
AAAGTGAAAGCCAGTTTTCCAGAGTTTTCTCAAAATACCACATTTTTAAT
ACTTTGATCAGAACAGAGACAATGGCTGAAGGAAATGTTGAAATAATTAC
TGAGGTAAGAACTTCATCTATCATCATATTAAGTATAGTTTTTCAACACT
ACAATACAGACATAGTCAAATAGTTGTTTTAGAGAAGAACACATaaatta
ctttccctcagccaataaaaatggtttacaccgtttaggagtctcgccat
ttcacggtactccattgcagaggcccggtaaaaatggtaggtaaaaatgc
gcactttagtactgtgaaaggttagaNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNccgtttttctgctatgtttccttatgagaaccaga
tgtttacctaccgtttttttacggaggagagtgaattttccgtgatcgct
aaaatcaaaacaatggaagtcgacactcctaaacggtgtattatcTTGTC
TCTTGGTAACTGTTGTGGAGTaattaccgtgagtggtcctaaatccgaca
gccctgcctaactcaggccctttaagtggatttattttgagaaaaaaaac
tttgcaacTTTTTTCCGCCTAATTAGGCAGCAATCACAAAATTCTTCGTT
TCGCGTCACCCGACCGACtctcaaaaattgagtaaaattgagtcggtgag
tcggtaaatttgtcggaatttttctgtcaatgacctttcctttgttcaaa
aattttattattgccgattttttgcgagcgatttctagcgcattcgcagc
attttgtgactttgtttatcattagtTACATGCACCATTTTGgggtcgga
ggtcacagtgttcaaaggtcataattttaaaccacccattacacgcAATT
GTTTTGGCCGgttggctggctggcagttttctccaagaatgcactctaaa
aatggatggaaaaatggaaactggaaaaattttacgaccaaccgaccgac
cgactcactttttagacccaacgaggacgcaaaatgaagatatttttgat
tgccgccttatatactctttcgaaaaaaattctttttaagaAATTCTTGC
GACTTCATGACCAAAAAAGATAGAGTTTTAATATGGTTACAATGATACCC
ATCAAGCCGGTGAAAAATCTACATAAAATGATATTAATGTGGAGAAAATT
GCTAACAAATACATAAAATGGCGCCTCCGCGGGATACAGCGTTGAGCTTT
TCACCTCAACTTTTGTACATAAGTAGTTCAAGCAGCTACCCCAATAgtga
aatatttatttatagtCTTTTCTCTAGGCACGAAAGAATTACCAAAACTT
CAGTATTTTCACTTGAGTTCAAAGTTCAAGCCGTATTTTAACTATATTGC
ATAATGAAACCCTCCACTACAGAGGTACTTTCAATACGCTGTCTCTCCTC
CCTAGTGccttggaaaaagaaaatcacgaattttcaattttgtatNGCTG
GCTCTCCTCCCTAGTTTAccttggaaaaagaaaatcacgaattttcaatt
ttgtatcgCACGGAATGTAGGGAAAAACATAGTTTCTCcaagaaaaaact
tcaaaaatggaAGGTACAGGCCAATGTTAAACCTGCTTGTTAAAAATGGT
TGATTGACAAGTAGAATCTTACGCAATAAGCcagtaatcaaatttaaaag
gaagacgcaatagaccttttcgcctttccatccgccatattgaattgtat
gcaaaaattatggtggccgaattgccgtggtgaaattcccttagaaagta
tgcaaaacatNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNagaaagtttgatgtgtgtactccgtcttcgtggaat
ttcttaatggcatgaaaacagaatatgctatgtctttaagaaaaaatttc
taaaaggcttttgttgttctgtgaatatttctttttggattgagaaattt
catctttaattgttctaatgattataatatttattcataagatgctttgt
tgtccttttaatctttgtgtaaacttgcatatgttttgcatactttccaa
ctaaatccaaccacggctttttcgttcctctatttttgcatacaattcaa
gatggcaaatggaaaggcgaaaaggtctattctttcGTTCTTTTGAGCAT
AGACCAATTAGCTCTCTCTcttatatttttcttaaaagaatgtttacaag
aataaGATTTCGTTTATTgaataatcttttaaaagtgttgATTGATGCGT
GAGGCCTTCAACTCTGTCGGTATTTTTTTAGACTGTACCAGAGAGATCTT
AGAAAAGAGGGAAAAgagaattttcttttcagaaccACTTAAAGGGCCTG
AGAAATcggatggggtctttcaaagatacaaactaaaataaaaacaaacc
tttcgctgtgacgcaatgaagataccaaagtgtcaactaaactgagagat
ttgttacactgaaccaattgaaccaaaacaataattgcttcttaaacaaa
aaataattttttattacaaaattgataAACGTTTTNTTACACATTGATTT
GTTACACATTGATTTGAACCAAATTACAATAATtgtgcttcttatacaaa
agataattttttattacataattgttaacattttaaacatgagcaacaga
ttcagaatgATTGAGgtaattaattttacaactcacacttttttgatcac
attaattgacatcttgacattataacCATCTTgctagatgttttgtttcg
agagtccttgcaatagtttatcgttcaacttggagaaggaatgtttgtaa
acatagaatttctttcataacagttatttggctttggggtgtcggaatta
ggcagggctgtcggatttaggaccactcgcGGTAGTTCTTCAAACTAACT
AAACTTCAGATAGtcgcgttctccaaaacaactaccgtaacttggtctaa
tgtcgacacccctcctccaatttcgacacccttttaatcagctgaaattt
atagaaagtttgaaactgtttttctttgcttggtGGTAGTGGTCAGAGAA
gaataatcttttttcaatcagtgattcaagctttcatattattcctttct
ctaaagaagagAAGGGTGTCTGAATTAGACGAGGgttgtcgatattagac
caacttacggtatagaCTGGATTTGCCAATCAGGATGTTGTATACCGTAa
tttggtctaatatcgacacccTCCTCTAACAGGCTAACTCTaaacaggga
tatgttatagcggagctgaataacgcacatttaaaaaagccttgttctat
ctctgtccctgacattaaaatttgatatgaaatttaacttttttaattac
aaactcgtgaaatttggatttcctcttagccaatgattctgctgctgcat
ttatcgttcacgattaaaaacttttaattatcaagagcgtctgtaaaaca
ttggtgaatgacaatttaaaaaaatgaaaaatattgttttcattagtaaa
gttatttaagaagtttcttctctaagattataaatagtactttttcattt
tgaaataccgTGCTACACCGCGGGATGCCTCACTTTcttaactgatattt
tcagatagcaagtcggtatgtctgattatggaaaaaatttcaagtcaatt
gaaacaagatttgtcaaaatatttacatccaaaatttttaaagagaaatc
atgaaagcttctcaaattcataacacacgctgataaaaatagatttcatt
tacaaggaaacTTTTagggtatcttctacaaatattattttgatgaaaag
cgggaacatcatagcaaaatatgtgcaaacatactgcatgaatactttgt
ctgcttcatttttcttatgaaacaaaacactcaaggggacagagatggat
ttctatatGAACAgattacaatagaaaagacaaagaagcaatccgctaag
gaattctcttctttcatccagctccgctataacatatccctgctcTAAAG
CTCtgaaacagcatctaataacatgaaaaccagaatatgattcttcaatg
ggaatcaaaactataaagtgcacttacaaacatcaatttgtcagatctaa
caaaattaataaccgcactgtcatcattcagttagggaaaccatccagga
tcctgccattctataagccagcaaaaactaaacgACACTTGtgaacttaa
gtttcttaccattttccatcgaaaacaatcaaaaacatcgctacttccca
aagctggagaccaaaacaaattatcttccaagattatggcgcccttttgg
atctattgttaaggccatcaaaatggtggaaagagttgtgGAAAATCAGA
GGCGCCCGCTGctttgagggtggtaacgccaaaacgcccaatatgatctt
ccaataGAAGTCGAGTTAGTTGCCttgcgagttacgtcatgcactccacc
acAGCACGCAAAGAACGGTGCTTccgtgaatatcaataattataagaata
tcttatgtgcttaacttcagtaaactttgagtgcttcattgaagatgaag
aagataagaagataaaaaatgcgctggataattatcattgtaacagtttg
gtcaatcattgctaaaagttaaaaaaagtttattccgacaaaaaaaattc
agccaattaaaagcacagtgtccaaatgttcctaactgtcattgaaaata
aaacaaacgattttctgtcaagagccttgtaaacattccaacaacttcca
tcgaaatgatctatcacagctcagtcagAAGATGGAGTCGAGAACGCTCG
CAGAAAGCCCGCGAGCTCCCAcacgggtgaaaaactttaatctgtcaatt
attttctcaagcgaagagtacttGAAGCGATTCTAGATTTACGATAGTGC
cacggatcatcaatggatagtattcaattatcattatccctttattttca
atcctagaacttttgcaaaaaaaaggaaaaatagaaaaggtgtatttttt
actgctctattcacatactgaatttgaaagatcttctatgtggcgttttt
tctgcaaatttcaaaaaactgatttttgtctcacctttgcgggactttgg
cttaagtgcttgtgtgcagcatagggtacaaagtccaaacatgcgtttcc
cgtaatttttgtatgaagagttaggtctatactgtctatttccgacaccc
ttttttagagacagtaataatatgaaagcttgaatcactgattgaaaacg
gattattcctctctggaccactaagcaaagaaaaacagtttcaacctttc
tataaatttcagctgatgaaaagggtgtcggaattagagagGAGgggtgt
tgacattagaccaagttacggtaccaGACTATCCCACTCGATACAATCGA
TAACTTTTTCCAATCAATGTCAATGACTAAGGCGGCATAGAAAAACTGTT
CTGTTCGCATCACAGCAGTTGTTAAAAACACATACGGGTGGGCGGGTGGC
CAGAAAGATTTTCTGGTTTTAGAAAATCGCATCAGAAACAGTCAGAAAGC
CAATGGGCCATTCctgaatttgtctgtaacagggggggcGGACAACACAG
GATTtctgagggcaaaagttttcaccaaaatttgaaatttccaaggcgag
aaaagaaaatgaatgaatttccaaggcaattgaattaaaaaaggcaaaaa
agagtggaattccaatgcatttttcaaaagtacatggatttttatcggaa
tttccaaccaccactggaaaagaaaaaatatttccgaTACTAAGAAAAAA
TTGGAATGGCCTCTTCTTCTGATCAGGGTGAGGGGGTTCAAGGTCAAGAG
AAAAACTCGTTGAATCTTCAATCTCAGACAGAAAAAAAGGCCTGAAGGCA
AAAATTCATTTCCTTCAATGTGGAGTGGATTTGGCTTCTACAATagtaag
gcggcaatcacaaatatcttcgtttcacGTTGCCAgaaaaaattgagtag
aattgaatCAGTGAGTTGGTAAATTTGTCcaactttttctgtcaatgaca
ttccttcgttcaaaaatttattttcactttttagacccaacgaggacgca
aaatgaagatatttgtgattgccaccTAACCCAAACTCcccaaatccaat
aaaaacaacattggcATCGGTAAAAAAGGGGTTTTCAGAGCttgttttgg
aatttttcatgcatttttgaaaagtctacaaccttttgtctgTGATTATC
AATAGAGCGAGCAGTATAAAagacaacttttctatttttcctttttttca
aaagttccagaaatgaaaataaagggataatgataattgagtATTGTCTA
CTGAAGATATGTGGCagtatcgtaaagctagaatcgcttcgcttACTCTT
CGCCTGAAAAAATGGTTGACAGTTTAAAGTTTTCCACCCATCGTGCGGGA
ACTCGCAGGCGTTCTGCGAGCTTCCTTAGCTCAATCCTCAAACAGCACAA
AATGGTAGAATTTAGCTGCTGGAGATGATTTTGATGGAAGTCGTTGAAAT
CTTTACAaggttcttgacagaaaatcctttgtttgatGTCCATGATGACA
GTgtcattattaatttttttagatctgacaaattcaGTGCGGCTGGAact
tccaggattagaaaaagctatatatacctgttatcttttttctttaaaga
atcaacaagccatcaacatcgataaatttcacacatttcctcatcagaaa
cttttaaaattatctgccatcataactttcttgaagccgctccaaaatta
accaatcggtatcgggttatgtatcggaattcctacaGGAGCtctttgta
aaatagctaagttggcaaaaagacttttcccgggggtttgaggaaaaaac
aaAACTGGATCATAATTTGCCttaagtctatttcaaattggctggcagtg
ttttttcaaacctcaataacttttgatagaatttgaattagttagCGGTT
TTGtactcgttaaaaagataatccagagtggaatattatcaaaaaagaaa
aaaattcaagaaatggaaaaacaattttcttcttcttcattttcaatctt
tttatttttcgatctttttggagttttttcttttaaaagcaataattcca
ctcctgtttgtcttttcaatgagcacaaaatcgctacttaattcaaatta
tatcaaaagttattgaggtttgaaaaaacactgccagctaatttgaaata
gactttaaattTACACTGTCACATGCTTAAAATGAATAAGTAATCATTCT
ATCGTGGGTGCAAAATAAGGCGGAACTAAATATAGCGTCCTTGGCCATAA
TATTGCTGCCTCATCTCTATTCGCCCGCACGAGAACacaagctaatcatt
tttttctcgcacaCTAAAGGGGAAAAAGAAAGTGATCTATATTCTTCGAA
GAaagaacgtcaaaaaaaacCCATTGACCAAGAGATGTATTTTGGGGTAG
AGAATTGATCCTATGAAGACGAAAAAATTTTGGCAAACAGAGGGGCCACC
TAGAATATTTTCCAGTAGGGGGGCTACCTGTATCCTAGAAGAAGTTGGGT
CCAGTGCATTGCACACGTTCAACTATTAGTACTAgtttccgaggtaatcg
tcagtaaacattcgaaaacctcctttttttcttttgtttaaaaagaaaac
attgcagtgaaatatttctttgttttcaattaaaagaagctattgtaacg
taaaatttctttgttcttttttatattgaagaaaaaaaatNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNccgccgaagagtgcaaaaagtggta
atagtgcaattaacgattaatcgcactcctctaaaccaatcagattcgag
taattttgcacggctgacgattattaaagttatttcaatttttaaaaatt
ttcattcgaGTGCCTGTATTAATGGATCATGACGATTCTTTTTTTCAGCT
GAAAAATGATGTTCAAGAACTGGAGAAGATTTTATCAAGTGTAATCAGAA
GTAATGTTCGTCAAATTATTGTTCAGTCCATATCTTCACTGAAATCACAA
ATAGAAAAACTTGAAGCTGAAAAAGCCAAAGCCCAAGCAGCATCCAAAGC
GCCATCAGATGAAAAAAGTAGCACCAAACCTATCTACACAGTAAAGATTT
CTACATACGGTAAGGggaattgaatttaaaatatctaATTGATAGActta
attgaaaatatattaaaaaaggCATTTGGAGGCTCACAATAAATATTATT
GAATATTTTAGCATTTGAATCAAGAGATTACTACCAGTTTTgaaattgca
aattttacaTAACAATAAATATTATTGaatataatattttatgttatatc
aaaataaattaataGTCTACACATTGGAGTTGATTTATGCTGATTCTGAC
ACAACCTCTATTTAGGTTTTGATGAGTCGagtaaatttgtcaaaatttat
gTCAGCATTAAAAACGTAGAAAAGATTAAAGATGATCAAATTATCTTCAA
AACAACCGAGACTTCAATGAAAATGACAGTGCAAAATCACATGGATCGCC
ACCACGTTCTACATATCCAGAGACTGGCACATCCAATCAATACCACTGCT
TGCACTTGTAAAGTAAGCTTGTAACTTTTTTGCACTCGCATATCATTTTA
TAACGAATTAGCCAAAAAAAAGCGCTCAAAGATAGTAGTTTACTTGTTAC
AGCAATCATCTTTCTAACCTTCATGGTTCCTTTTCCATACTTAATGGTAC
TAATAGTCCTGATCATTTTATTAATCAATGACCGAAAAAAAGTATTGCTG
CAAGATTTTGTTTTCTTATTatgattatgaaaatttttgattctgACTGA
TCTGTATTGATTTTGCACCTTACGCTATTAAATCGAACGTTTTTTCGTCA
TAATGGTATCAATTGCTTGACAGTTTTGTAAAATTAACTATTGTTTCCAT
TCAGGTAAAAGCCGGTAATATTGTGATAGCACTTCGAAAAGCAGAGGACG
GTCAGACATGGGGTGGAATGACTGAAGCACAACGCAAAGATAAAGAGGCA
AAGTAAGAGATTTTCGTAATGGATAAATCAAATCCGGTGTTCATAGTGGG
Tgagaattttactgaatttaaaagaaaggggggcttgtgaaaatttcaaa
taaaaggggtGGCTTGGACAAAAAGAGTGGGGTtaattttttaagggggg
ggggcttggaagatttggcaatttgcaaaagagtgttttccattcatttt
taaatttctcaacaatGATTATATTTCCATTCATTTGAATAAAGCAAAAA
CTCTGTTTCTACAACTCTTGATGGAGTTTGTTGCTTTTTCAACCTTTGCA
AGACAGCTGCTTTTGTAAAAGGGCTCATAAAAAAAGGTCGAAAAAATAGG
GGAGTTGAACTTAAACCTGGgaaaaagaggggggttgaaTGAAAAGAGGG
GAGTtgaggaattttcatttttaagagggGGGCTGAGCTAAAAGAGGGGG
TGCCATTCCTCTGCCCACTATGGTGTATGGCGTTCTTCAGCTCTTTGTTC
ATCGGTTCTTATTTATAGCCACTAATCTCATGCAATAACATTCtatgttg
aaaatgttttattcgCTCTCTGTAGGCTGAGGCTAAATCCTTTAAAACTT
GGTACAATAGAATAGGCCttaaaaatgtttcacattttagAACCTGCAAA
TGATTTTTGAATGCTACTACACAGGAATGTTGAATTTCAGCTCGATTCGA
GGTCTTTCCTTTCAAACGACATATTTCGAACATTCTTTAATTCTTCAGTG
GCCGTAGCATATGGGTAGGGAATCCGGTTACCGCGATGTACAAAGTCGGG
GGTTAGAAGATTCCTCATCCGGGTCATGCGGAAAAGGCCTGAGAGTGATA
GCTATTTAATGAATTTCTGCTTGCTCTCAGCAACCACATAGTATAGTAGA
CGATCGATGGTTATAGTAGTAAAAGGAGTGGCGCTCGTCTAATATTCAGG
TAAGACAGTCAAATAAAAGGTTGTCCTCTTTAACTTCTTCCTTCACACAG
GGATAGTAAATTCAACTCGAGCACGCCTTCAGACGCGAACGAAGATCCAC
AAGCGGGCATCATGAACTTGATGAAGAAGATGTATGATGATGGTGACGAT
GATATGAAAAGAATGATCAAGAAGACTTGGTATGAATCTTCGCAAAAACA
AGGCGGTGCAGGTGCTGGTGGTATGCCAGGAATGCCCGGTATGCCTGGTA
TGCCTGGATTGTAACAAAATATAGTATGTTCTTTGTATGGAGTGAGCAAT
TAGTGGAATTTTCTTCAGTTCAATTTTCGTCGTGTGCTGTCTATTCTAGA
AAGATTCATTTTCAAGTTTTGGGTTATTTGATGGCttaagcatttttaag
caattttataGATTAAAGGAATTTCATAAATTCTACTAACTGACACGGCT
TAATATAGAGTATAATATCAGGATGACATGAGATGGAATTTTTTTCAGCA
CTAggattttctattatttttttactatattttcgACCAAAACTTATTCT
AAACTCGATTTTAAGTAATTGTTATAAAGTGTAGATGAATTTATTATCAA
GAACTGATGCACGAATCAATTGTAATTTCTGTAGGGTTCAGAAttgaaga
aaagagaaaaagatatCAAATATTCAGAAAGAAAAA
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_004076XLOC_004076Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00007255-exon-sc0000075-1491911889:335394..335597TCONS_00007255-exon-sc0000075-1491911889:335394..335597Clytia hemisphaericaexon
TCONS_00007255-exon-sc0000075-1510915933:335394..335597TCONS_00007255-exon-sc0000075-1510915933:335394..335597Clytia hemisphaericaexon
TCONS_00007255-exon-sc0000075-1575043694:335394..335597TCONS_00007255-exon-sc0000075-1575043694:335394..335597Clytia hemisphaericaexon
TCONS_00007255-exon-sc0000075-1491911889:344642..344852TCONS_00007255-exon-sc0000075-1491911889:344642..344852Clytia hemisphaericaexon
TCONS_00007255-exon-sc0000075-1510915933:344642..344852TCONS_00007255-exon-sc0000075-1510915933:344642..344852Clytia hemisphaericaexon
TCONS_00007255-exon-sc0000075-1575043694:344642..344852TCONS_00007255-exon-sc0000075-1575043694:344642..344852Clytia hemisphaericaexon
TCONS_00007255-exon-sc0000075-1491911889:345109..345305TCONS_00007255-exon-sc0000075-1491911889:345109..345305Clytia hemisphaericaexon
TCONS_00007255-exon-sc0000075-1510915933:345109..345305TCONS_00007255-exon-sc0000075-1510915933:345109..345305Clytia hemisphaericaexon
TCONS_00007255-exon-sc0000075-1575043694:345109..345305TCONS_00007255-exon-sc0000075-1575043694:345109..345305Clytia hemisphaericaexon
TCONS_00007255-exon-sc0000075-1491911889:345648..345745TCONS_00007255-exon-sc0000075-1491911889:345648..345745Clytia hemisphaericaexon
TCONS_00007255-exon-sc0000075-1510915933:345648..345745TCONS_00007255-exon-sc0000075-1510915933:345648..345745Clytia hemisphaericaexon
TCONS_00007255-exon-sc0000075-1575043694:345648..345745TCONS_00007255-exon-sc0000075-1575043694:345648..345745Clytia hemisphaericaexon
TCONS_00007255-exon-sc0000075-1491911889:346744..346966TCONS_00007255-exon-sc0000075-1491911889:346744..346966Clytia hemisphaericaexon
TCONS_00007255-exon-sc0000075-1510915933:346744..346966TCONS_00007255-exon-sc0000075-1510915933:346744..346966Clytia hemisphaericaexon
TCONS_00007255-exon-sc0000075-1575043694:346744..346966TCONS_00007255-exon-sc0000075-1575043694:346744..346966Clytia hemisphaericaexon
TCONS_00007255-exon-sc0000075-1491911889:347328..347379TCONS_00007255-exon-sc0000075-1491911889:347328..347379Clytia hemisphaericaexon
TCONS_00007255-exon-sc0000075-1510915933:347328..347379TCONS_00007255-exon-sc0000075-1510915933:347328..347379Clytia hemisphaericaexon
TCONS_00007255-exon-sc0000075-1575043694:347328..347379TCONS_00007255-exon-sc0000075-1575043694:347328..347379Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000075supercontigsc0000075:335394..347379 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
87.3096	86.3762	29.3905	18.9263	17.4753	13.7206	22.4154	21.1962	21.0496	24.4301	22.7235	17.1585	31.5099	31.6608	16.0684	30.7967	42.4043	33.2546	0	5.72758e-05	35.1908	34.2323	66.401	54.3366	33.2979	34.9942	31.3061	27.1213	37.9337	42.2235
Blast
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BLAST of TCONS_00007255 vs. Swiss-Prot (Human)
Match: CYBP (Calcyclin-binding protein OS=Homo sapiens GN=CACYBP PE=1 SV=2)

HSP 1 Score: 86.6557 bits (213), Expect = 9.038e-20
Identity = 73/223 (32.74%), Postives = 125/223 (56.05%), Query Frame = 1 
Query:  202 ELKNDVQELEKILSSVIRSNVRQIIVQSISSLKSQIXXXXXXXXXXXXXXXXPSDEKSSTKPI---YTVKISTYGFDESSKFVKIYVSIKNVEKIKDDQIIFKTTETSMKMTVQNHMDRHHVLHIQRLAHPINTTACTCKVKAGNIVIALRKAEDGQTWGGMTEAQRKDKEAKDSKFNSSTPSDANEDPQAGIMNLXXXXXXXXXXXXXXXXXXTWYESSQKQ 861
            EL+ D++E++ +L    R  VR  +    S ++++I+    +K++ +A         +   PI   YTVKIS YG+D+S KFVKIY+++  V ++  + +    TE S  + V+N   + + + +  L  PI+    + KVK   ++I  RK  +   W  +T+ +++ KE +   +++ T      DP  G+MN++KK+Y+DGDDDMKR I K W ES +KQ
Sbjct:    5 ELQKDLEEVKVLLEKATRKRVRDALTAEKSKIETEIKNKMQQKSQKKAELLDNEKPAAVVAPITTGYTVKISNYGWDQSDKFVKIYITLTGVHQVPTENVQVHFTERSFDLLVKNLNGKSYSMIVNNLLKPISVEGSSKKVKTDTVLILCRKKVENTRWDYLTQVEKECKEKEKPSYDTET------DPSEGLMNVLKKIYEDGDDDMKRTINKAWVESREKQ 221
The following BLAST results are available for this feature:
BLAST of TCONS_00007255 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
CYBP9.038e-2032.74Calcyclin-binding protein OS=Homo sapiens GN=CACYB... [more]
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