TCONS_00007253 (transcript) - C. hemisphaerica

Overview
NameTCONS_00007253
Unique NameTCONS_00007253
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length2649

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00007253 ID=TCONS_00007253|Name=TCONS_00007253|organism=Clytia hemisphaerica|type=transcript|length=2649bp
AATCCAGGGAGGAAAGACTGGCACCCTCTCCTACCTTCTATCAAAAGAAG
AGCCTTTGGGTTGCTTTGGACTGTGGTCACAATACCCATCAAGAGATTGT
TAGTGAAGGAGTGCTTTTAGCTATTGGGAACAGTGTCCCTAAAATTTCAC
ATCTTACCTAGTACAAAGGCCTAGACATTTATCTTTAGGCAAAGGTTGTG
GACATGAAAGACCATTGCTTATTTCTGGAGGTCGAACATGGGTGTGGCAT
TGCTTCCAAAAAGTCCAAAAAATCGCACTGAATGTTATGACGTTGAACGT
AGATTCACCAAAAGTATATACAGTACAAGGTGTCCCTATCTCTGTCACTG
GTATTGCTCAGGTCAAAGTACAAGGTCAGAATGAAGAAATGTTACACGCT
GCTTGCCAACAATTTTTGGGAAAGTCAGAACAAGAAATCCGAAAAGTTGC
TCTTGAAACTTTGGAAGGCCATCAAAGAGCCATCATGGGAACCATGACAG
TTGAACAAATCTACCAAGATCGTAAAATGTTCTCCAAATCAGTATTTGAG
GTTGCATCATCTGATCTTGTGCACATGGGAATCAGTGTCATCTCGTACAC
ATTGAAAGATATTCGAGATGAAGAGGGTTATTTGAGATCCCTTGGTATGC
AACGTGTCGCTGAAGTTCAATGTGAAGCCAGAATTGGTCAAGCAACAGCC
ACTATGCAGTCTGGAATTAAGGAAGCTATTGCTGAAGAACAACGTATGAA
AGCCGAGTTCGTCAACAAGATTGAAGTGGCTCGTGCTGAAAGAgatttct
ctttgaaaaaagccTCTTATGACCAAGAGGTCAACACCAAGaaagcaACA
TCAGAATTGGCCTACGATTTACAGgCTGCAATTACCaaacaacaaattaa
agaagaaaacatGAATGTCAAGGTTATCGAACGTAGCCAACAGATCAAAG
TCCAAGCTGAAGAAATCATCCGTAAGGAGAAAGAGTTGGAAGCCAATGTC
CGCAAACCAGCTGAAGCACAGAAatacaaagaagaaaaaattgccGAAGC
TAACAAGAACAAAATCATCTTAGAAGCTGAGGCCGAGGCTGAATCCATCC
GAGTCCGTGGAGAAGCAGAAgcttttgccatcgaagccaaGGCCCTAGCC
GAAGCCGAACAGATGACCAAGAAAGCCGATGCGTGGAGAGATTATCAAGA
AGCCGCCATGGTTGACATGTTGTTGGAGACTTTACCAAAGGTTGCTGCCG
AAATTGCTGCACCATTATCCAAGGTCAAGAAGGTGACGATGGTATCCAAT
GGTGGTGCAGATGTTGGTGCATCCAAAATCACAGGGGAATTATTGGATAT
TGTTATTCGTATGCCGCAAGCAATGGAACAGCTCACTGGTGTCGATATCA
CAAAGtCCTTCCGCAAAGGGGCATAAACTCACGGGTTGAATGGAAAACCA
TCATTGACCGTTGGAAAATGATTATCACATATAGATTGTATATATTTAGT
CCTCTTGATTTTCAATAATCAACCGGCCATCGCCATGGTTTTATCACATC
ATGAAATGATAGACACTAAAAGTATCCTTTTGGCTTCATATAATAACTAA
ATAATGAAATTATGTAAAATCATTGTAGTAAAGTATCAATTATTTAATCA
AATTTAATCCTCATAGGTTCTGTTTTGGAAGAGGTTCAAATTTTCGGTCA
TGAGGCTATTTTATACCCAgtggaagaaattttgaaattcctcCTCCTTA
CAATCTaaactctttgtttttttaagGCTAATCATAAAGCTTTGTTTTAA
CTTTACTAAAATCTTTCGCTTTACCATTACTCTCTCACTAACTGTACCTT
CTTAGCATAGATACAACTTTACATGAACTGTAAACCCACTCAAGTTTCCC
TATTAAAGGTGATGAGTATTTTCTAATTGACATCACCTCATTTTAGACCA
CTCTTTCCCTTGTTTTAAACAGTTTATACTTTACTTTGTTTGTAACAACT
ATTTTCAATCAATAGCAGGTCCACTTTGAATGCACACACTTTATTTAAAA
ACGTATTTTAATACTTAATGGCTCTCCCAGAAAATTTTTgcacatggggg
gtggaggacaTATCGGATATTTTGTCCTTGTTTTGGAGGCAAATTTTCTC
TGTTTAGGGGTGAGTTCGAATGTCCGGGGGGTCGACTCATGCTTGTCTAG
AGGGTGAGATctgctgtccgggggtaaatttccaaaaaatgttatatcct
acaaccccccccccccNGTTTAtgggtgattttgaatgtccggggggtca
actgatgcttgtccagagGGTGAGATAAATCCGGggataaatttccaaaa
aatgttatacctacccccccccatattcaatttttttctggaggATCCCA
ATCTTATATTTTGTTAATGCGAGTGTTATCCATAAAAGCACTTTGATCTC
TTCTCTTACTTCGATAGTTTCATGTATGAGATGGATTTCTATAGCACTAC
gtatgatttttttattctgATTTCCTGTGTTGTTTTTTCAACCAAAATAA
TTCGAGGATCCAGAATTTGTTTATTCGAATATTATAAAGATAATTGTACA
TTTATATTATTTCTGATGACCTAAAATATATCCTGGAAAAACTTTAAGC
Run BLAST on NCBI

transcript from alignment at sc0000075:325611..334085+

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00007253 ID=TCONS_00007253|Name=TCONS_00007253|organism=Clytia hemisphaerica|type=transcript|length=8475bp|location=Sequence derived from alignment at sc0000075:325611..334085+ (Clytia hemisphaerica)
AATCCAGGGAGGAAAGACTGGCACCCTCTCCTACCTTCTATCAAAAGAAG
AGCCTTTGGGTTGCTTTGGACTGTGGTCACAATACCCATCAAGAGATTGT
TAGTGAAGGAGTGCTTTTAGCTATTGGGAACAGTGTCCCTAAAATTTCAC
ATCTTACCTAGTACAAAGGCCTAGACATTTATCTTTAGGCAAAGGTTAGC
CTTTATTTATTTAAAGTTATACCTTATGTTATTTATCTTGatcatagttt
ctagaggggtcaagacccccccacttaggtaagaggacccccccccttaa
gtgctaacccccccttaggaaattcatttaaaatttcacaccccccttag
aaaatcagtataaatgaaacgATTGTACAAGAGTCACAATTNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNtaggaa
aatcaaacttttaacaccccccttgcttttggttcatcaaaacccaagac
cccccccggcccctaaatgtaggggggtagaaactatgtagctgatatga
tttcttttgaaaatacagCAATACTGTTGGTTCAGACTGAGTAGctataa
aatttaatttttttccatcaGGTTGTGGACATGAAAGACCATTGCTTATT
TCTGGAGGTCGAACATGGGTGTGGCATTGCTTCCAAAAAGTCCAAAAGTA
AGGAAATTTTGCACCTTTTTTTAGTAGAGTGTACTGTCTCAATGACTTTA
AAAGCAAGAtttaatttgttaaaatttctttaattatttTAGAATCGCAC
TGAATGTTATGACGTTGAACGTAGATTCACCAAAAGTATATACAGTACAA
GGTGTCCCTATCTCTGTCACTGGTATTGCTCAGGTTTGTTATTATAATAG
TTAGTGTCTTGGTCCAGTCAACGTTTTGAATCTCTTAGGTCAAAGTACAA
AGTCAGAATCATatatcttttctttaaagtacaTTAAGCCTTTTTTACAC
AATTTGTTCATTAAATATAATAATCCTGGAAAGGGTTGATTTTAAAGTAT
GTTCAATAGAATTTTAGTTCTAAGTATTTCTCAACTGTTATAAATATTTC
TCATAGGTCAAAGTACAAGGTCAGAATGAAGAAATGTTACACGCTGCTTG
CCAACAATTTTTGGGAAAGTCAGAACAAGAAATCCGAAAAGTTGCTCTTG
AAACTTTGGtatgaaaaaaactttgaaatatttcttctcttgcatcttga
aagattttgttgtgttcttttactttaaaaaaactttctgtGTTGACCAA
TAACTTTCTTTATTTatcaatttcttttctttttgacaAATAGGAAGGCC
ATCAAAGAGCCATCATGGGAACCATGACAGTTGAAGTAAGGACCAACTTT
TAATTACTTCTTAATAGTTATTTAAAGAACAAAGTTGTGAATATAGTATT
TGGACAATATAATACTTTTAGTGATTGACTCCTCCATTAGGCTATTGCCC
TtctaaaatttcttttcctgttttatccattttttttttatagaacaGTA
ATCtttctttcaacaaaaaaaggtgctcttatgctgacaaagcagaatta
gtgttgtttcttttgtttaaacatTATTTGCAGTAGCAAATCTTGAAAAG
CCCTTTTAACCTGAACTGAGCAAAACGAGCAAAAGATGAAATGATTTCCT
ATTAATTCTTTGTAGCAAATCTACCAAGATCGTAAAATGTTCTCCAAATC
AGTATTTGAGGTAAAATATTCATATCCATACTTCAATGTACACAATTGCA
ATTtagtttaaaatttcattagAATGATCAAATTAGGAAAATTTTGCACT
TATTACTTTTGATTAATCTTTTGACATTATATTTATCATTGGCTTTATGA
GTTAGATGGTAAACCTTTCGAGCAGCTATTTCTTTGAAATCGAAAATCAA
ACTATATCTTGTTTGTTTTAGGTTGCATCATCTGATCTTGTGCACATGGG
AATCAGTGTCATCTCGTACACATTGAAAGATATTCGAGATGAAGAGGTAT
AACAATttcattatattattttgccTAGAGCTCCGAGCTTGTGTTCAATC
AAACAACTTGGGTGACATCCGGGGTAGGTGGTCAGTTAAATGAGGTGGGA
AATCCAGGGAGGTCGGTAAAACTGGTAAATCCAGTGTTATCcgaataatg
aaaaaatgaatttaagggGGTCCTgaaagattgaaaaaagaatCCAGGGG
CTCCTTTCCCAAAcaagacctcctcaacataggatGAGAGAactttttgg
aatagcccaattttaGGCAATACACTATTCTCAAAATACCAAATATATTA
CTGTCCTTGTATTCAATGTTTGTGAGCGCCTTgcacttttgttttaaaat
cgaTTACTgtattttagcaaaaaaatattgatatatgtaaattgaattct
ttttctaatgaaattattttcatagGGTTATTTGAGATCCCTTGGTATGC
AACGTGTCGCTGAAGTTCAATGTGAAGCCAGAATTGGTCAAGCAACAGCC
ACTATGCAGTCTGGAATTAAGGTGAGAAACAGAACTTCTCCTAGGCTAGA
ATAACATTCAAAACTTTGTTAAAtatggttaaattttcataccGATGTTT
ATCCTTTATATCAAGATTTTTCGGAACTTTTACCTTCAATCCCTCACATC
AAATATTGAATATCATTTTCAAACCAATTCTATTCAGTCTcctattttgt
ttattttcctcAACCAATGAAGTTTGAAACCATTTTTCGGCTTTGGTTGT
TTTAGGAAGCTATTGCTGAAGAACAACGTATGAAAGCCGAGTTCGTCAAC
AAGATTGAAGTGGCTCGTGCTGAAAGAgatttctctttgaaaaaagccTC
TTATGACCAAGAGGTCAACACCAAGGTATGAAGTATTTTAATTGCAATTG
ATCATAATCCATACTCAACCTGACCTTAATAAATTCATTAGTTCTCAACA
TTGTTTTCTTTCACCTTTTCGTCGTTTTGGGCTTATTCTCAAAAAGGAGT
TTGAAAGAACTTCTATATCTTTTCtagaattttgttttttttaaactata
tttttactaaaatgaaataaatttttttttttagaaagcaACATCAGAAT
TGGCCTACGATTTACAGGTAATTTTAACTTTTATGATTCAGAGTAAATTT
ATAAATCGTTGGTAAGGTTAAAGATAATAAAAGTCAAACCTTGCTAATTT
GGGCGTAGCTACTAGTCACTtggtatattttttcttttgtaggCTGCAAT
TACCaaacaacaaattaaagaagaaaacatGAATGTCAAGGTTATCGAAC
GTAGCCAACAGATCAAAGTCCAAGCTGAAGAAATCATCCGTAAGGAGAAA
GAGTTGGAAGCCAATGTCCGCAAACCAGCTGAAGCACAGAAatacaaaga
agaaaaaattgccGAAGCTAACAAGAACAAAATCATCTTAGAAGCTGAGG
CCGAGGCTGAATCCATCCGAGTAAGTTGTACTGTACTGGTTTGCTATCAT
TATAATTGAGCTACATGGGGATCGGTTTTGATCTTTCGTGTGTCTAAGCT
AAGAATTGTGTATATTTATACAGCGTTAATGTGATAACTCCTGACATTTG
ATGTCAATCAATGGACCATGAACTTAATCTCTCGTTAAGTCTTTGACAGA
AATTAGGAAACCAACCTAGTGAATTTTCGTCTTTTGGTTTTGAGTCTCAT
TCGCTCTTTTTGGACTAAAATCTGAAACCATTGAATTCTTAGGTCCGTGG
AGAAGCAGAAgcttttgccatcgaagccaaGGCCCTAGCCGAAGCCGAAC
AGATGACCAAGAAAGCCGATGCGTGGAGAGATTATCAAGAAGCCGCCATG
GTTGACATGTTGTTGGAGACTTTACCAAAGGTATTTTCATATTACTATCT
CCATTATATATTGATCGTTTCGCTGTTTACATAGATCAATTCACCGTCAA
AATTAAGCAGAGCTGACTGCGCTCCCTTCACGACTTCCCTTTGGTTGGAC
GCAAAACCCCTCTTAATTTTAGACCAACAAAAAGTCGCACTTCTGATTAA
GCATTGTACGGTCGAAATAGCCTACTTTGGGATTGATAAAAATGTCTACC
TCATACAAattgtcttttatggaagaatcAACAAGGTTTCGAGTCGGAGC
AAGATATTTGACTGCTATTTAAAAGAGCGACCATCTTTTTGAAATGTACA
GTAAATTCATTCAAATTAAACGCTAAAAAGGGATTGGGTCGATTTAACAT
GTTAGGAAGGAAAAGAAAATGTATGTTTCATTAAGAACATCAATACAAAC
ACTTTCGGCAATTTCAGGGTTGATACGTGTTTGTATTGTCGTTGGTTAtg
ttgtttacattttaaaGCCTATATTTTGAGGCTAAAGGGATTCGTCAAAA
TATGAAGTAACTTAAGTTTTTCTCCATCTATTTGGCCATTCTTTTACACG
GGGACACTTTTATGATCACTGCCTTCATTGATAAAAGTAACTAGTGATAA
ACAACTGCAATGCATCATGTTTCTCCTGATAACTTCTCACTTTATGCTTC
AGCGGTTGTTTTTGAAGTGCTTTCAATACTAAATTACGTAATTTCGTTTT
AATTTGCTTACATTTGCTTGCACGAAATTGCAAAGGCGGATTAGCATTCA
AATCACTCAAACAATGAAGAAAATGCAATTAAAGCAGTTAAAATTGATAA
CTGAATATAATAGCGCATGCTATTGTGAAGTGTCTCAAAGAAATTCCTGC
CATATATCATGCTCATGTGATCTCCTGCTGATGATTCAGTTTTATTCATT
GTTGGTATTTTTCATAAGGAAATGTATCTTTTACTCTTTTATAAAAGCAC
TTTGGTCTAGATACGACCCTAATAGCACTGCAGGTAATAAGATCAGTTtg
ctataagaatatttctgaTTTCTTATAAGAAATAGAATCAAACTCGGAAG
TGTAACTTTGAAAACGAGAGAAAAAACTAAATGGTCCCTAATGCATGAAT
ACTAACCACTGAAAGTGGTTAAAGTTTCTACAATCTTTACCCTCTTTTTT
CCTGTTTATACTTTTCGTTCACAGCGGGTATGAACTAAATATCTTATATG
CATTAAATTTCTCTCTGTTGTCAGAAAATTGCCTGAGCTGTCTGAACAGT
GCTTCTGTAGATACTTATATTGTAACTTCAAGTCAAAAATGTTTAAGATC
AGAATACATATTACATTAGTGGTTTGTCTTAAGACCCGCCCATAGATTTT
TTACAAGACACTTCTCTTAAGGGTTTCCCACGGACTGATAAGTTAAAAAT
TACTCGATTTTTACTGTTCATACTAAATCAAGCAGGAATTTCTCAATGTT
TCTTTAAGTATTTTAAGCCAGTATTGCTGACTGCTTTGTACAACCAACGA
ATAACTTATATTTAATAACTATATCATTAAAAAACAGGTTGCTGCCGAAA
TTGCTGCACCATTATCCAAGGTCAAGAAGGTGACGATGGTATCCAATGGT
GGTGCAGATGTTGGTGCATCCAAAATCACAGGGGAATTATTGGATATTGT
TATTCGTATGCCGCAAGCAATGGAACAGCTCACTGGTGTCGATATCACAA
AGGTagtctttctttgttttgtacACCTTTGTTTACATTTGCCAAATATT
AAATAATTAAAGCCTCATTATTTCAattctaaaaatgccaataccctttt
aagtcaaaaaaggAGCCCTCTATGTAAGTTTTGTCTCAAAGGATTTAAAC
TTCTATTTTTTGGGGTGGAGAGGTTGGGATTCAGTACCAATCATCTTATT
GGGCTGTTGTAAACCCTACTGGTGTAGTCATATCAAGTATCGATACTTGA
TATCAAGATAGTAAATATTCGTTGAAGTTGGAGGGATGAGTTAATTTGAC
TTCTTCTCTCTTCACATTCAGGAACAACTGACTTTTTTAGTAATATgtga
atttttgttttctcttttagtCCTTCCGCAAAGGGGCATAAACTCACGGG
TNAATATgtgaatttttgttttctcttttagtCCTTCCGCAAAGGGGCAT
AAACTCACGGGTTGAATGGAAAACCATCATTGACCGTTGGAAAATGATTA
TCACATATAGATTGTATATATTTAGTCCTCTTGATTTTCAATAATCAACC
GGCCATCGCCATGGTTTTATCACATCATGAAATGATAGACACTAAAAGTA
TCCTTTTGGCTTCATATAATAACTAAATAATGAAATTATGTAAAATCATT
GTAGTAAAGTATCAATTATTTAATCAAATTTAATCCTCATAGGTTCTGTT
TTGGAAGAGGTTCAAATTTTCGGTCATGAGGCTATTTTATACCCAgtgga
agaaattttgaaattcctcCTCCTTACAATCTaaactctttgttttttta
agGCTAATCATAAAGCTTTGTTTTAACTTTACTAAAATCTTTCGCTTTAC
CATTACTCTCTCACTAACTGTACCTTCTTAGCATAGATACAACTTTACAT
GAACTGTAAACCCACTCAAGTTTCCCTATTAAAGGTGATGAGTATTTTCT
AATTGACATCACCTCATTTTAGACCACTCTTTCCCTTGTTTTAAACAGTT
TATACTTTACTTTGTTTGTAACAACTATTTTCAATCAATAGCAGGTCCAC
TTTGAATGCACACACTTTATTTAAAAACGTATTTTAATACTTAATGGCTC
TCCCAGAAAATTTTTgcacatggggggtggaggacaTATCGGATATTTTG
TCCTTGTTTTGGAGGCAAATTTTCTCTGTTTAGGGGTGAGTTCGAATGTC
CGGGGGGTCGACTCATGCTTGTCTAGAGGGTGAGATctgctgtccggggg
taaatttccaaaaaatgttatatcctacaaccccccccccccNGTTTAtg
ggtgattttgaatgtccggggggtcaactgatgcttgtccagagGGTGAG
ATAAATCCGGggataaatttccaaaaaatgttatacctacccccccccat
attcaatttttttctggaggATCCCAATCTTATATTTTGTTAATGCGAGT
GTTATCCATAAAAGCACTTTGATCTCTTCTCTTACTTCGATAGTTTCATG
TATGAGATGGATTTCTATAGCACTACgtatgatttttttattctgATTTC
CTGTGTTGTTTTTTCAACCAAAATAATTCGAGGATCCAGAATTTGTTTAT
TCGAATATTATAAAGATAATTGTACATTTATATTATTTCTGATGACCTAA
AATATATCCTGGAAAAACTTTAAGC
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_004075XLOC_004075Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00007253-exon-sc0000075-1491911889:325611..325804TCONS_00007253-exon-sc0000075-1491911889:325611..325804Clytia hemisphaericaexon
TCONS_00007253-exon-sc0000075-1510915933:325611..325804TCONS_00007253-exon-sc0000075-1510915933:325611..325804Clytia hemisphaericaexon
TCONS_00007253-exon-sc0000075-1575043694:325611..325804TCONS_00007253-exon-sc0000075-1575043694:325611..325804Clytia hemisphaericaexon
TCONS_00007253-exon-sc0000075-1491911889:327382..327457TCONS_00007253-exon-sc0000075-1491911889:327382..327457Clytia hemisphaericaexon
TCONS_00007253-exon-sc0000075-1510915933:327382..327457TCONS_00007253-exon-sc0000075-1510915933:327382..327457Clytia hemisphaericaexon
TCONS_00007253-exon-sc0000075-1575043694:327382..327457TCONS_00007253-exon-sc0000075-1575043694:327382..327457Clytia hemisphaericaexon
TCONS_00007253-exon-sc0000075-1491911889:327553..327643TCONS_00007253-exon-sc0000075-1491911889:327553..327643Clytia hemisphaericaexon
TCONS_00007253-exon-sc0000075-1510915933:327553..327643TCONS_00007253-exon-sc0000075-1510915933:327553..327643Clytia hemisphaericaexon
TCONS_00007253-exon-sc0000075-1575043694:327553..327643TCONS_00007253-exon-sc0000075-1575043694:327553..327643Clytia hemisphaericaexon
TCONS_00007253-exon-sc0000075-1491911889:327867..327968TCONS_00007253-exon-sc0000075-1491911889:327867..327968Clytia hemisphaericaexon
TCONS_00007253-exon-sc0000075-1510915933:327867..327968TCONS_00007253-exon-sc0000075-1510915933:327867..327968Clytia hemisphaericaexon
TCONS_00007253-exon-sc0000075-1575043694:327867..327968TCONS_00007253-exon-sc0000075-1575043694:327867..327968Clytia hemisphaericaexon
TCONS_00007253-exon-sc0000075-1491911889:328104..328145TCONS_00007253-exon-sc0000075-1491911889:328104..328145Clytia hemisphaericaexon
TCONS_00007253-exon-sc0000075-1510915933:328104..328145TCONS_00007253-exon-sc0000075-1510915933:328104..328145Clytia hemisphaericaexon
TCONS_00007253-exon-sc0000075-1575043694:328104..328145TCONS_00007253-exon-sc0000075-1575043694:328104..328145Clytia hemisphaericaexon
TCONS_00007253-exon-sc0000075-1491911889:328476..328520TCONS_00007253-exon-sc0000075-1491911889:328476..328520Clytia hemisphaericaexon
TCONS_00007253-exon-sc0000075-1510915933:328476..328520TCONS_00007253-exon-sc0000075-1510915933:328476..328520Clytia hemisphaericaexon
TCONS_00007253-exon-sc0000075-1575043694:328476..328520TCONS_00007253-exon-sc0000075-1575043694:328476..328520Clytia hemisphaericaexon
TCONS_00007253-exon-sc0000075-1491911889:328732..328806TCONS_00007253-exon-sc0000075-1491911889:328732..328806Clytia hemisphaericaexon
TCONS_00007253-exon-sc0000075-1510915933:328732..328806TCONS_00007253-exon-sc0000075-1510915933:328732..328806Clytia hemisphaericaexon
TCONS_00007253-exon-sc0000075-1575043694:328732..328806TCONS_00007253-exon-sc0000075-1575043694:328732..328806Clytia hemisphaericaexon
TCONS_00007253-exon-sc0000075-1491911889:329236..329331TCONS_00007253-exon-sc0000075-1491911889:329236..329331Clytia hemisphaericaexon
TCONS_00007253-exon-sc0000075-1510915933:329236..329331TCONS_00007253-exon-sc0000075-1510915933:329236..329331Clytia hemisphaericaexon
TCONS_00007253-exon-sc0000075-1575043694:329236..329331TCONS_00007253-exon-sc0000075-1575043694:329236..329331Clytia hemisphaericaexon
TCONS_00007253-exon-sc0000075-1491911889:329566..329685TCONS_00007253-exon-sc0000075-1491911889:329566..329685Clytia hemisphaericaexon
TCONS_00007253-exon-sc0000075-1510915933:329566..329685TCONS_00007253-exon-sc0000075-1510915933:329566..329685Clytia hemisphaericaexon
TCONS_00007253-exon-sc0000075-1575043694:329566..329685TCONS_00007253-exon-sc0000075-1575043694:329566..329685Clytia hemisphaericaexon
TCONS_00007253-exon-sc0000075-1491911889:329895..329927TCONS_00007253-exon-sc0000075-1491911889:329895..329927Clytia hemisphaericaexon
TCONS_00007253-exon-sc0000075-1510915933:329895..329927TCONS_00007253-exon-sc0000075-1510915933:329895..329927Clytia hemisphaericaexon
TCONS_00007253-exon-sc0000075-1575043694:329895..329927TCONS_00007253-exon-sc0000075-1575043694:329895..329927Clytia hemisphaericaexon
TCONS_00007253-exon-sc0000075-1491911889:330053..330280TCONS_00007253-exon-sc0000075-1491911889:330053..330280Clytia hemisphaericaexon
TCONS_00007253-exon-sc0000075-1510915933:330053..330280TCONS_00007253-exon-sc0000075-1510915933:330053..330280Clytia hemisphaericaexon
TCONS_00007253-exon-sc0000075-1575043694:330053..330280TCONS_00007253-exon-sc0000075-1575043694:330053..330280Clytia hemisphaericaexon
TCONS_00007253-exon-sc0000075-1491911889:330553..330690TCONS_00007253-exon-sc0000075-1491911889:330553..330690Clytia hemisphaericaexon
TCONS_00007253-exon-sc0000075-1510915933:330553..330690TCONS_00007253-exon-sc0000075-1510915933:330553..330690Clytia hemisphaericaexon
TCONS_00007253-exon-sc0000075-1575043694:330553..330690TCONS_00007253-exon-sc0000075-1575043694:330553..330690Clytia hemisphaericaexon
TCONS_00007253-exon-sc0000075-1491911889:332248..332412TCONS_00007253-exon-sc0000075-1491911889:332248..332412Clytia hemisphaericaexon
TCONS_00007253-exon-sc0000075-1510915933:332248..332412TCONS_00007253-exon-sc0000075-1510915933:332248..332412Clytia hemisphaericaexon
TCONS_00007253-exon-sc0000075-1575043694:332248..332412TCONS_00007253-exon-sc0000075-1575043694:332248..332412Clytia hemisphaericaexon
TCONS_00007253-exon-sc0000075-1491911889:332842..334085TCONS_00007253-exon-sc0000075-1491911889:332842..334085Clytia hemisphaericaexon
TCONS_00007253-exon-sc0000075-1510915933:332842..334085TCONS_00007253-exon-sc0000075-1510915933:332842..334085Clytia hemisphaericaexon
TCONS_00007253-exon-sc0000075-1575043694:332842..334085TCONS_00007253-exon-sc0000075-1575043694:332842..334085Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000075supercontigsc0000075:325611..334085 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
49.4524	49.2225	23.6125	21.7059	93.6742	59.5436	78.2881	82.16	70.4698	80.3401	85.915	52.6756	103.529	85.0607	34.9719	40.1702	80.4446	88.373	71.6932	76.5848	145.27	146.067	62.6802	65.141	82.2535	81.3247	73.3966	70.02	55.0051	53.4926
Blast
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BLAST of TCONS_00007253 vs. Swiss-Prot (Human)
Match: FLOT1 (Flotillin-1 OS=Homo sapiens GN=FLOT1 PE=1 SV=3)

HSP 1 Score: 461.07 bits (1185), Expect = 3.691e-153
Identity = 248/412 (60.19%), Postives = 339/412 (82.28%), Query Frame = 2 
Query:  170 PRHLSLGKGCGHERPLLISGGRTWVWHCFQKVQKIALNVMTLNVDSPKVYTVQGVPISVTGIAQVKVQGQNEEMLHAACQQFLGKSEQEIRKVALETLEGHQRAIMGTMTVEQIYQDRKMFSKSVFEVASSDLVHMGISVISYTLKDIRDEEGYLRSLGMQRVAEVQCEARIGQATATMQSGIKEAIAEEQRMKAEFVNKIEVARAERDFSLKKASYDQEVNTKKATSELAYDLQAAITKQQIKEENMNVKVIERSQQIKVQAEEIIRKEKELEANVRKPAEAQKYXXXXXXXXXXXXXXLXXXXXXXSIRVRGXXXXXXXXXXXXXXXXQMTKKADAWRDYQEAAMVDMLLETLPKVAAEIAAPLSKVKKVTMVSNGGADVGASKITGELLDIVIRMPQAMEQLTGVDITK 1405
            P    +  G     P++++GGR +V  C Q++Q+I+LN +TLNV S KVYT  GVPISVTGIAQVK+QGQN+EML AACQ FLGK+E EI  +ALETLEGHQRAIM  MTVE+IY+DR+ FS+ VF+VASSDLV+MGISV+SYTLKDI D++ YL SLG  R A+VQ +ARIG+A A   +GI+EA A+++++ A+++++IE+A+A+RD+ LKKA+YD EVNT++A ++LAY LQ A TKQQI+E+ + V+V+ER+QQ+ VQ +EI R+EKELEA VRKPAEA++YK E++AEA K+++I++AEAEA S+R+RGEAEAFAI A+A AEAEQM KKA+A++ YQEAA +DMLLE LP+VA EI+ PL+   K+T+VS+G   +GA+K+TGE+LDI+ R+P+++E+LTGV I++
Sbjct:    7 PNEAMVVSGFCRSPPVMVAGGRVFVLPCIQQIQRISLNTLTLNVKSEKVYTRHGVPISVTGIAQVKIQGQNKEMLAAACQMFLGKTEAEIAHIALETLEGHQRAIMAHMTVEEIYKDRQKFSEQVFKVASSDLVNMGISVVSYTLKDIHDDQDYLHSLGKARTAQVQKDARIGEAEAKRDAGIREAKAKQEKVSAQYLSEIEMAKAQRDYELKKAAYDIEVNTRRAQADLAYQLQVAKTKQQIEEQRVQVQVVERAQQVAVQEQEIARREKELEARVRKPAEAERYKLERLAEAEKSQLIMQAEAEAASVRMRGEAEAFAIGARARAEAEQMAKKAEAFQLYQEAAQLDMLLEKLPQVAEEISGPLTSANKITLVSSGSGTMGAAKVTGEVLDILTRLPESVERLTGVSISQ 418
The following BLAST results are available for this feature:
BLAST of TCONS_00007253 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
FLOT13.691e-15360.19Flotillin-1 OS=Homo sapiens GN=FLOT1 PE=1 SV=3[more]
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