TCONS_00007230 (transcript) - C. hemisphaerica

Overview
NameTCONS_00007230
Unique NameTCONS_00007230
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length322

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00007230 ID=TCONS_00007230|Name=TCONS_00007230|organism=Clytia hemisphaerica|type=transcript|length=322bp
agaaaatgttaaaaaaattcagtcctgaaattacacgcctgtttaaatca
tgttttcaaaaattggcccgagtgtggcccgtgcgtggccCGCGTGTGGC
CCGAATTCTCGGGCCAGCTCGGGCCATACTagggctttacgcgaattcca
ataaaagttttggcccgagaattctcgggccatgtcgagggtcgtagcAA
GCGAAGCGATCCAGCGCGCCAGACTCCACTCCACTGGTCTGACCCTTTCC
TGGTCACAACTACCTCATAATTCTCTTATTCGCAACTTTTTTGTGCTAGG
AATTTTAGTCTTAATCTTCTCG
Run BLAST on NCBI

transcript from alignment at sc0000074:631359..631680

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00007230 ID=TCONS_00007230|Name=TCONS_00007230|organism=Clytia hemisphaerica|type=transcript|length=322bp|location=Sequence derived from alignment at sc0000074:631359..631680 (Clytia hemisphaerica)
CGAGAAGATTAAGACTAAAATTCCTAGCACAAAAAAGTTGCGAATAAGAG
AATTATGAGGTAGTTGTGACCAGGAAAGGGTCAGACCAGTGGAGTGGAGT
CTGGCGCGCTGGATCGCTTCGCTTgctacgaccctcgacatggcccgaga
attctcgggccaaaacttttattggaattcgcgtaaagccctAGTATGGC
CCGAGCTGGCCCGAGAATTCGGGCCACACGCGggccacgcacgggccaca
ctcgggccaatttttgaaaacatgatttaaacaggcgtgtaatttcagga
ctgaatttttttaacattttct
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_004061XLOC_004061Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00007230-exon-sc0000074-1491911889:631359..631680TCONS_00007230-exon-sc0000074-1491911889:631359..631680Clytia hemisphaericaexon
TCONS_00007230-exon-sc0000074-1510915933:631359..631680TCONS_00007230-exon-sc0000074-1510915933:631359..631680Clytia hemisphaericaexon
TCONS_00007230-exon-sc0000074-1575043694:631359..631680TCONS_00007230-exon-sc0000074-1575043694:631359..631680Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000074supercontigsc0000074:631359..631680 .
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
16.0226	10.9795	32.4294	34.3354	53.1685	44.1933	57.0471	69.908	36.8211	42.4952	46.614	38.5077	27.7082	24.0122	23.3558	23.9882	31.6585	25.624	16.9831	23.4267	28.1591	29.29	5.60923	8.07741	29.2449	33.6431	25.0915	16.6369	21.0068	22.1458
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00007230 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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