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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00007221 ID=TCONS_00007221|Name=TCONS_00007221|organism=Clytia hemisphaerica|type=transcript|length=925bp
CTTTAAGAAGGCGATAGAAAAGTTGATCAAACAAACCCCGCCAAGTAATT
CCGTCATGCAATGGTATTTCAGATTCGAACCAAATGAAATTGGTGAAAAA
GCTGAGCATATTTTCTGCGACCACCTTTTTTCCCTTAAAGATGATGAAGT
ACTCAAAGACACTGTCATTCTCAATTCTCTTGACTTTCATTATAATGTAA
ACAACGGAATGCAACAAGAATTTGACGTCCTTCTTTTCTCTTGGTCCAGA
AAATTGATTATTGGTGTTGAGGTCAAACGCAAACTTTCTTCCAAGGCCTT
TGCACAACTCGACAGATATTATGAACGGATAGAGAAAGGGCTGAGTGATC
AACTCGGGCCAGGTTGGACGTTCTCCCTGTGGTTTGTGTGGAGAACGATA
CGGAGCTTTATGGCACTCAGCATTACATCAATCTAGACACTGAATTGAAA
GGCTGGCTTTCAAACATATTCAGAAGATACCCAATCATACCAGCTTGTAT
CCCATACGTACCCCCTGTCAATCAACTTAAGGATGTTTTACGAATCGTCA
TCTTCGCTCTCCACTCTTCGAAGACTGCACCCATCACAACAACGAATTGG
GTGGATTACATCACCCAAGCCATTGATACCGTATGTACCACGGACAATAT
CTTATTCTACAGTAAGAAACAGCTCCCCGTCATGAAAGCTCGCGATCCCC
AGTTCAATAAAGTATTGCTCTACGGTGGCTGGGGCTGCGGCAAATCTTTC
TTATTGCTAGAAAAAGCCAAACAGTTGAACGGAATTAACAAATACAAAGG
CAGGATATTGTATGTTGTAACACGATCTATCTCAGGGGAAGAAACTTTAT
GGGAATGGCAATTGAAGGAGGACCTTGAAAAGGAGCAAGGTGTGTTTGTC
AAAGGGCTGAACTACACTAAGGAAG Run BLAST on NCBI protein sequence of TCONS_00007221-protein >TCONS_00007221-protein ID=TCONS_00007221-protein|Name=TCONS_00007221-protein|organism=Clytia hemisphaerica|type=polypeptide|length=144bp
FKKAIEKLIKQTPPSNSVMQWYFRFEPNEIGEKAEHIFCDHLFSLKDDEV
LKDTVILNSLDFHYNVNNGMQQEFDVLLFSWSRKLIIGVEVKRKLSSKAF
AQLDRYYERIEKGLSDQLGPGWTFSLWFVWRTIRSFMALSITSI Run BLAST on NCBI transcript from alignment at sc0000074:272785..273709 Legend: exonthree_prime_UTRCDSfive_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00007221 ID=TCONS_00007221|Name=TCONS_00007221|organism=Clytia hemisphaerica|type=transcript|length=925bp|location=Sequence derived from alignment at sc0000074:272785..273709 (Clytia hemisphaerica)
CTTCCTTAGTGTAGTTCAGCCCTTTGACAAACACACCTTGCTCCTTTTCA
AGGTCCTCCTTCAATTGCCATTCCCATAAAGTTTCTTCCCCTGAGATAGA
TCGTGTTACAACATACAATATCCTGCCTTTGTATTTGTTAATTCCGTTCA
ACTGTTTGGCTTTTTCTAGCAATAAGAAAGATTTGCCGCAGCCCCAGCCA
CCGTAGAGCAATACTTTATTGAACTGGGGATCGCGAGCTTTCATGACGGG
GAGCTGTTTCTTACTGTAGAATAAGATATTGTCCGTGGTACATACGGTAT
CAATGGCTTGGGTGATGTAATCCACCCAATTCGTTGTTGTGATGGGTGCA
GTCTTCGAAGAGTGGAGAGCGAAGATGACGATTCGTAAAACATCCTTAAG
TTGATTGACAGGGGGTACGTATGGGATACAAGCTGGTATGATTGGGTATC
TTCTGAATATGTTTGAAAGCCAGCCTTTCAATTCAGTGTCTAGATTGATG
TAATGCTGAGTGCCATAAAGCTCCGTATCGTTCTCCACACAAACCACAGG
GAGAACGTCCAACCTGGCCCGAGTTGATCACTCAGCCCTTTCTCTATCCG
TTCATAATATCTGTCGAGTTGTGCAAAGGCCTTGGAAGAAAGTTTGCGTT
TGACCTCAACACCAATAATCAATTTTCTGGACCAAGAGAAAAGAAGGACG
TCAAATTCTTGTTGCATTCCGTTGTTTACATTATAATGAAAGTCAAGAGA
ATTGAGAATGACAGTGTCTTTGAGTACTTCATCATCTTTAAGGGAAAAAA
GGTGGTCGCAGAAAATATGCTCAGCTTTTTCACCAATTTCATTTGGTTCG
AATCTGAAATACCATTGCATGACGGAATTACTTGGCGGGGTTTGTTTGAT
CAACTTTTCTATCGCCTTCTTAAAG Coding sequence (CDS) from alignment at sc0000074:272785..273709 >TCONS_00007221 ID=TCONS_00007221|Name=TCONS_00007221|organism=Clytia hemisphaerica|type=CDS|length=435bp|location=Sequence derived from alignment at sc0000074:272785..273709 (Clytia hemisphaerica)
CTAGATTGATGTAATGCTGAGTGCCATAAAGCTCCGTATCGTTCTCCACA
CAAACCACAGGGAGAACGTCCAACCTGGCCCGAGTTGATCACTCAGCCCT
TTCTCTATCCGTTCATAATATCTGTCGAGTTGTGCAAAGGCCTTGGAAGA
AAGTTTGCGTTTGACCTCAACACCAATAATCAATTTTCTGGACCAAGAGA
AAAGAAGGACGTCAAATTCTTGTTGCATTCCGTTGTTTACATTATAATGA
AAGTCAAGAGAATTGAGAATGACAGTGTCTTTGAGTACTTCATCATCTTT
AAGGGAAAAAAGGTGGTCGCAGAAAATATGCTCAGCTTTTTCACCAATTT
CATTTGGTTCGAATCTGAAATACCATTGCATGACGGAATTACTTGGCGGG
GTTTGTTTGATCAACTTTTCTATCGCCTTCTTAAA
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this transcript:
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00007221-exon-sc0000074-1491911889:272785..273709 | TCONS_00007221-exon-sc0000074-1491911889:272785..273709 | Clytia hemisphaerica | exon |
| TCONS_00007221-exon-sc0000074-1510915933:272785..273709 | TCONS_00007221-exon-sc0000074-1510915933:272785..273709 | Clytia hemisphaerica | exon |
| TCONS_00007221-exon-sc0000074-1575043694:272785..273709 | TCONS_00007221-exon-sc0000074-1575043694:272785..273709 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000074 | supercontig | sc0000074:272785..273709 . |
Blast
The following BLAST results are available for this feature:
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