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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00007184 ID=TCONS_00007184|Name=TCONS_00007184|organism=Clytia hemisphaerica|type=transcript|length=2210bp TAAGGTTGCCAAACAATCAGTTTATCAAATCTTTAGGctgataaacaaaa attaccagAAGAAAAGTAAACGAAATACTTATATACTGAAAGTATTTTAA GTATCAATCGACTTTAACgtatttattttgatattataaACGTTACGGGA ATTCTTTGATTCAGTGACACAGTCAGATGCGGCCACCATTTAATTGGGAT AGTTTAGGTCAAACTACAACCCACTCCACTTTTTCACTATTCTGATAGCA GTCATCACGATAGGTATCACATCCTTCAGTAAAACCAGAAAATGGTCCAA GTGGATTTGCGTACGAGATTGAGTCTAGTCAAAAATCCTCTCACAGTTGT CCCTAGATATACAGCATTTTTCCATCAGCTCATTTTTAAACTTGCAATTC CAGTAGGGGAAACCATGCTCTGTTTGTTTATACGTTTAAAATAAAAAGCT AGAAATGACGTATGTAGGGTAGGAATCTTTTGGAAAGGATCAATCTTCAC TCGTACATATGGGTTCATACGGCTTTAACCACaaacaaataaagaatttt aGCGCTAATAAGAATTTGAGACGCGGAGGAAGTTATTGTTAACGTTAACG AATGCCATCAAAATTGGTGCTTCCCTACAGCGGTTTTTTGTAATTGTCGG TAAATAAGACGTGAAAATGCAGATGAAAAAACGCGTGGTTAAATGGTTTC AAAAAGCAAATAATGTACCCCATCTCATCATCACATTAAATCACAAATGC TTGTAGACTGGCCACATATAAAAAATCATAAGTGATTCCACTATACATAA TAGCGAGTGGTGGATAATCAAATGGTTGAAATCTAAGATACTGTAGGGTT TTTCAACAAAATGGTCGATGGCAGAATTGGTGATCGTTGGCTccaatcat tttttcatttttgctgaaaaagaaCAAGCCTGAGATGAACAAGTCGTCGC GCGGCATCAACTATGACTTAGAGACGTCACTAACCTACGATGTATCCAGG AAAATATTTACTGATAAGCTTAGTATTGACCCTGGAGTCTGTCCTGGTCA TGGCGAAAAGTTTGACGATGCAGTTGAATGGATATGATGACGATTGTGTT TACTTATCTAAAGAGAAAGACGAAAAGCTTGATTATATGTTGATATCAGG AGGTGCGAAAGTGGATTTTACCATGTTCGAACCGAACGAAAACAGTCCAA ATGTACAACGACATGAAGTTACCGAGCATGAACAAATTGGATTGCTGCTT AATAAGACAGgCGATTACAAATTCTGTTTCGCTAACGCCTACCAGAGTCA CCCCATCAATGTGCTGTTTGAGTATGATATGTTTGAAGATATAGAAGCTG CACCCAATGGAAACATGCAGAAAGAGAAAGACATTTTCGTAAAGAAGGCA AAAGACGCCGTTAGAGAAATGTTCGACCAGCAAGGTTACCATTTGACAGA CGATGCGCACAGACGTTCCTTCATGAAAGCAGTTGTAGAACATCAAAAAG AAGCGCTCTACCACGGTGAAGGGAAAGGCGCTGACGATCGACTGAAGGGT ACAATTACAATGATTGGTATCTACAtggatgaaatggaaaaatcaTTGAG CAGACATGGAAAACGCATCGGGCGCCATCACTTCTTACAGATGATCAACC ATGACCGAGTAATGCAATATTCTATCCTAATCTCCTTAGCTATGGTTGTC AGTACATGTGTCCAATTGGTTGTGGTCAAAGGATTCTTTAATGGCAAAAT GTCTTTGAATGtcttttcttataaatagcaaATTTTATGATATATAGGTT TAAGCGTTTATAGGAGTGGCttctttgattaaaaaaaagaattttcaaac caACATTCGTACGCGTATACGAGTGGTAGCCACCGTGCATCATTGTTGGT GGACCTGTTTTAGTTTGCGATCTACGTTGAGGTCTTTATTGGTTTGGAAT TGGGCATTTCAAGAGCCTGGACTTGAATTTTTGTAGCTTTTGTATAATAT TTCTTATAGATTATCTTATAGGGggttacaaagaaaatttttaaattaca aTAGTATCATAGAATAAATTTAGGGAAGAAAGAGAAAAGATTATTAGAAT ATATGATTGACTTAACTTATCTATAGTTCTCCTTTGTAACAAGCGAAGAT GAAATCCTCGCAAGGGCGACTTTTCTGCGCGGTTGCTGGTCGAATGGAGT TGACTGTGTT Run BLAST on NCBI transcript from alignment at sc0000074:160230..167374- Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00007184 ID=TCONS_00007184|Name=TCONS_00007184|organism=Clytia hemisphaerica|type=transcript|length=7145bp|location=Sequence derived from alignment at sc0000074:160230..167374- (Clytia hemisphaerica) TAAGGTTGCCAAACAATCAGTTTATCAAATCTTTAGGCTGATAAACAAAA
ATTACCAGAAGAAAAGTAAACGAAATACTTATATACTGAAAGTATTTTAA
GTATCAATCGACTTTAACGTATTTATTTTGATATTATAAACGTTACGGGA
ATTCTTTGATTCAGTGACACAGTCAGATGCGGCCACCATTTAATTGGGAT
AGTTTAGGTCAAACTACAACCCACTCCACTTTTTCACTATTCTGATAGCA
GTCATCACGATAGGTATCACATCCTTCAGTAAAACCAGAAAATGGTCCAA
GTGGATTTGCGTACGAGATTGAGTCTAGTCAAAAATCCTCTCACAGTTGT
CCCTAGATATACAGCATTTTTCCATCAGCTCATTTTTAAACTTGCAATTC
CAGTAGGGGAAACCATGCTCTGTTTGTTTATACGTTTAAAATAAAAAGCT
AGAAATGACGTATGTAGGGTAGGAATCTTTTGGAAAGGATCAATCTTCAC
TCGTACATATGGGTTCATACGGCTTTAACCACAAACAAATAAAGAATTTT
AGCGCTAATAAGAATTTGAGACGCGGAGGAAGTTATTGTTAACGTTAACG
AATGCCATCAAAATTGGTGCTTCCCTACAGCGGTTTTTTGTAATTGTCGG
TAAATAAGACGTGAAAATGCAGATGAAAAAACGCGTGGTTAAATGGTTTC
AAAAAGCAAATAATGTACCCCATCTCATCATCACATTAAATCACAAATGC
TTGTAGACTGGCCACATATAAAAAATCATAAGTGATTCCACTATACATAA
TAGCGAGTGGTGGATAATCAAATGGTTGAAATCTAAGATACTGTAGGGTT
TTTCAACAAAATGGTCGATGGCAGAATTGGTGATCGTTGGCTCCAATCAT
TTTTTCATTTTTGCTGAAAAAGAACAAGCCTGAGATGAACAAGTCGTCGC
GCGGCATCAACTATGACTTAGGTAAGTTTTTCCATTTTCTAATTTCACCC
AAAAGCATGTTCTCCATTCTTTTTTATCATATTTCATTACTTACAGTAAT
ATATTTCCCAGGTCTATCGACCTTTATGAAATAATCATACTTAACATTTT
ACAATTTATGGAGATCTTTTTCCCATTCTGTGAGCAATTTTAATGCCCCC
CAGCGGTTTGCATGATTGAATATTCATATAAAGTACATTCTTATAAAAGA
GACCGTGTACTAAACGAGAATTTTCTTTCTGTAAAGTTCTTATAAAAATT
ATGAGAATTGAGACTATTTTCGTTTGACCACGAAAATGCAATTATTCTAA
TCACAACTTTTGGCAATAAATCGATTATGAGAACGCGTAACCTTGACTTT
TTTCATAAAGAGGTTGACATAAATTAAGAAATTTAAGACTTTAGAGGGTA
GAAAAGTGCAGAAACAGGACTTGTAGACCCTAGGCCCGAGGCCCAATAAA
GGCACCGTTAGAGTGGGCGCACCGAGCTTACACCCTCTTTTTCCAGGTAA
CTCCCGCTTCATCCCTTGTATGTGTTTCTTACAATAAAATTAGTTCCTAT
GAAAAACTTTTGAATACCACATTTAGAAGTCGTTACCATTTCTCTTTGTG
TGCTTTCTCTTATCAAACATCTACATAAATGCAATTAAATAATTCGAAAA
AAAATATTTATCCATAATGGTAGATAAAGTAGTGAGGTTCTCTTAAAATA
CGCGTGTACTAATAAAGGTACAAGCTCCCTTGAGGGAAGTCTTATATTGT
GAAAAGGAAAAGCAGTTCTTTTATTATGATTTAAAAAATCTTTGATTTGG
AGCTTTTGTTATTTAGGATAGATGTGCTATGCTATTACTAAGAAAACGTT
AAAATTTAAAATTGAAAATATTATTTGTATTTATCATTTTTTTCAAAACA
TGTGAATTTTTGAGAAGTGAAGAGCAAAGAGGAAGGATTTCAACGTGAAG
AAGAAATTTGTGTAGTGAATCCGGTATAAGTAATGTTATAGAAACGGGAG
ATTTGTTCTGAGGGAGTGTTTTGAATTTGTAAGCTACGATAAAAATGCGT
TCGATCGAGTTAGATACGAAGAGCCTCGAGTTATAGAATGATGACCCGAA
ATCAAGTGAGCTGGCACCAACACCAAACCATAGTCAATTGGAGAGTTGTA
TAGCATCAGGTTCAAAATTTGTGATGATATATTTTACAGCCATTCCATTT
GTATGGTGATTCGGAGGATAAGTATAGAGTCAAAGAGATAAAACAGCCCT
ATCTCGACTCGAGGCACAGTCCTGTCTCACACCCCAGCGAATCTTTTTTC
TCGCAGTGCGGATGAAAGGAGGTTGATAGCTTCGAAGTTTTTTTATTCCT
AGCTAAAAAAATCCAGTGGGAATGGCTTAATTCTTCCCGTCAGGAACACA
ACTTTGTCCGAATTTTCCGGTGGGGCAGGGATTCTCCCGAGTCTATGACA
AAAGGGTATCGAGACGCATTGAAAAGTTTTGGTCAGATGTTCCTATGGTT
AAGGAGTTTCACCCGGTCTACGATACAGGGGTATATTATAGTTAGAGTTG
ATAAGGAAATTCATTCAACACAGCAAATGATAACAGAGACTTGATAAGTG
ACAGATAGAATCTTTTTAATGATATAATTCTTTGATATCAGAATTTGCAG
CTTGTAACTATTAGATTAGATTAGATAATAAGATTCTACCGGATAGTAAG
ACAGTGATGTTAGTAAGTTTTAATGAAAATTGTGATGTTTTTGTGCCAAT
AGACTAATGTATGATATAATATGTAATGGTTGTAATGTAGGTTTAATATT
AGCTTGCTAAATTAGTAGATGACTGTTATAGATCATTGAAATGATTGCCA
CGGTTAGAGCAAATCCAAGTTAGTTATTACCAGGGCCAAATGTAGCTAAA
AGTTTTTAAAATTCAAAGCCAGGGAGCAGTGGGCTTACCAAATGACCCCT
ACAGTGCAGAAAAATGTCGGTGAAATTCATACCCTTACAGTGCATTTTTC
TCAAATTATCAAACAAATAAAAATTTTCGGGCAACAATGCGTAATTTTTC
CTAGACTTGTAATTATTTCTCAGTCAATTTGACTGACTGCCATCTTCTTC
CCGAGAATTCATAGTAAAGAGGGTCGACTTCCATAAACATAAGTGATAAT
ATCGAGTCCCTTTAGAATCTCCCTGGTTAATAATTTTATAATTTTACCAA
AATTAATTCAAAATGTTCATATATTTCTCGTCTAGAGACGTCACTAACCT
ACGATGTATCCAGGAAAATATTTACTGATAAGCTTAGTATTGACCCTGGA
GTCTGTCCTGGTCATGGCGAAAAGTTTGACGATGCAGTTGAATGGATATG
ATGACGATTGTGTTTACTTATCTAAAGAGAAAGACGAAAAGCTTGATTAT
ATGGTAAGTTTACCTAAAGGTCAGTAGCGTGGTGGGTCAAGGCAAACTGG
GGAGGCAATTTTAGAAGATTTGGGTTTTGGCGCCCCCTATGAAAAGTAAA
TATTTTTTAAAGAATAACGCGAGCGAAGCGAGCACGAAAATCTTTGGGTA
TTTTCTTCTTTTTGGCTGAAAACTGCCATATTTAAGGTGTAAAAGGGACG
CCGAAATTATAGGCTAGCGAAAAAAGTTTCTGCGATTCAGACTACCGAAA
TTAGTAATTTAAAGCGTCCTTTTTGCACCCTTTATAATTCGGCGCCCCTT
TGAAAAACCACCCTGCACCCTGCCACCACGCTACTGCCAAAGGTTTCTTA
TTTTGATAGAACTTTGGAGATTTTGAAATTTTCCATAATAACAGGTGTTT
TACAAAAGTATGATAGGTAGGATTCTGGACTCTCTTTTCATTGGAAGAAT
AAAGTGAGAAATGTTCCCTTTGAAAGAAATACCCGACTGAGATTTTGGAT
GTTCTTAAATGAAAAAACAACTTGTATCGACATTTATATTCTTCATCTTG
CTTCCTTCTCACTTGGTCACTAAGGGTGTATAATACAAAAAGGATTGGGC
TGAAAAATTATAATTTCGGATATTAAGAACGTCAAAAGCCTTTGGACGTT
TTAATTTTTTAAGCTTCTAAGGATTCTATTGTTTAAACAGTTTATAAGTA
GCTGACTCCCTAACAAACTCATTCACAGTTTAAAGTCTTCAAAGCTTTAA
AATCTCTTAGAATGTTTTAAAAATTATTCTAGCTTCGGAGTCTTATGTTA
TAAGAAACTTTGTTTTGAGAAACCTGTTCTTGAATTTCAGTTGATATCAG
GAGGTGCGAAAGTGGATTTTACCATGTTCGAACCGAACGAAAACAGTCCA
AATGTACAACGACATGAAGTTACCGAGCATGAACAAATTGGATTGCTGCT
TAATAAGACAGGTAGATGCTCTTTTTATTACCAGTTTGATCTCAAATTGT
TCTCATCTTGTTCTTATCTTAAAGGCAAAATTGAGATATTAAAAGCGCAT
TTTCGTTTTACTGTCTAAATCTTAACTTGCTTGAAATTCAACCATTCCAG
GCTCAAATGTTTTCTTAAATTATTCTTATTTTTCGGTATAAAATTGTTCT
TATAAAATAAAAAAGGCGATTAAAAATCTGAAGTGGATGGAAGGTAATGG
CAATTATCATTTGTCTGAAATTTAAACGGTGAATCTTTGTTTGATGGTTT
TTGCAACTATAGCACCTCATACCCAAATGTAGCCTGTACCAGACTCTTCG
TCGCTGACTGAAAATATAACCTACGGCAAGTTTTTTTCAAAATATAGAAA
ACGCCCGTGGCGGCAGGGTGATAAGGCTAACCCAAATGAAGTTTTCTTAG
ACTTTTCTTAAATTTCAGGCGATTACAAATTCTGTTTCGCTAACGCCTAC
CAGAGTCACCCCATCAATGTGCTGTTTGAGTATGATATGTTTGAAGATAT
AGAAGCTGCACCCAATGGAAACATGCAGAAAGAGAAAGACATTTTCGTAA
AGAAGGCAAAAGACGCCGTTAGAGAAATGTTCGACCAGCAAGGTACTGTA
AAACCCTAATCTAGCAACACTGATCTTTCGTTATGCAAGGGCTACAAAAT
CAGTATTTAAAAAAAACTCAAACCCACTCTCCTAGTTCGNTATCTAGCAA
CACTGATCTTTTGTTATGCAAGGGCTATAAAATCAATTCTTAAATTAAAC
TCAAACCCACTCTCCTAGTTCGCTTTTAAGATTCTCAAAGCGTTCACAAT
TTTGTATTGCCCATCAGTAAAATAAAAAAAAGTGATGTATATGGCTCTGG
GGTCTATTACGAAATAGGCTTTTATGTCAGACGGGCAAATCGATGACTTT
GGACCCCTGTGAAAATTGACTCTGTTGATTCTAAAACATATAAAGCAGGG
AAAAGTTTCGCCATAAGCTATATTTTAAGAAAATTGATAAGTGACTGGAA
GTTCTGGAACTGAAATTTTTATTTTGCTCCAACTATTTTTTGTGTCGGAC
NCTTAGGGGATATGCAAAGAGCAAGAAAAAAAATGGTTTCATATACAAAT
TGAAATTTCGTCGAGCAGTGAGACAGGACCGTCTCTAAATAAACTTGAAT
TACTTTGATTGGATATAATTTAGCGGGGATTAAATTTCACGATTTTAGTG
TCATCCAAGAAAATAAGTCCACGTGGAATATTTATCAGCCATCACCAGTG
GGCTTTTCCAGAAATAGTCCGTGTTCCCCCTGTTGAGGAATATCCAGGAG
GTTAACGATTTTTGTTCAAAAGTGGATATCCAGGAGGTTAAATATCGACA
AGGGAGCGGATATCCAGGGGGTAAGCATCTTTATAAAAGAGGATATCTAG
GGAGTTGAGCATATTTTTAAGAGTGGATATCCAGGGGGTTTTTACGAATA
AAGCGGGATATCCAAGGGGTGCGATACTTTGAAAAATCAATATCCTCAAC
AGTGGGGACAAATTTTTTTTCTGGAAAAGCCCATCTTGTTCGGTTCGCAA
AACTTTTCATTTCATTCCATTGGCATAGGTTACCATTTGACAGACGATGC
GCACAGACGTTCCTTCATGAAAGCAGTTGTAGAACATCAAAAAGAAGCGC
TCTACCACGGTGAAGGGAAAGGCGCTGACGATCGACTGAAGGTAAATACA
CGATCCTTTCTCGAAGTTTACTGGATATGTTTTACTTTTCCAGTGCGCAC
AGTTTTTTGAAAAATATGAACACTTTTTGAAAAATATGAACATTTTCAAA
ATTTTTGAAATCCAATAAAATCCAATAAAACTAAAACTGACATAAAAGCA
TGTAACCTGAAAGGTTTTTTTGTAATTGTGCATTGTAATTGTGCATCTTT
CATTTTTNAAAAGCATGTAACCTGAAAGTTTTTTTTGTAATTGTGCATAG
TCATTCATTTTTGTTCCATTTTCGAAGGCAAAAACTAAAATTGTACGTAT
TTTAATTTCTGTCCTTTCAAGCAAAAAGAGGTCTGTATGTTTACCCCAAA
AAACTATTTATTTTCTTAACAATCCAACTTAGGGTACAATTACAATGATT
GGTATCTACATGGATGAAATGGAAAAATCATTGAGCAGACATGGAAAACG
CATCGGGCGCCATCACTTCTTACAGATGATCAACCATGACCGAGTAATGC
AATATTCTATCCTAATCTCCTTAGCTATGGTTGTCAGTACATGTGTCCAA
TTGGTTGTGGTCAAAGGATTCTTTAATGGCAAAATGTCTTTGAATGTCTT
TTCTTATAAATAGCAAATTTTATGATATATAGGTTTAAGCGTTTATAGGA
GTGGCTTCTTTGATTAAAAAAAAGAATTTTCAAACCAACATTCGTACGCG
TATACGAGTGGTAGCCACCGTGCATCATTGTTGGTGGACCTGTTTTAGTT
TGCGATCTACGTTGAGGTCTTTATTGGTTTGGAATTGGGCATTTCAAGAG
CCTGGACTTGAATTTTTGTAGCTTTTGTATAATATTTCTTATAGATTATC
TTATAGGGGGTTACAAAGAAAATTTTTAAATTACAATAGTATCATAGAAT
AAATTTAGGGAAGAAAGAGAAAAGATTATTAGAATATATGATTGACTTAA
CTTATCTATAGTTCTCCTTTGTAACAAGCGAAGATGAAATCCTCGCAAGG
GCGACTTTTCTGCGCGGTTGCTGGTCGAATGGAGTTGACTGTGTT
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
Feature Name | Unique Name | Species | Type |
TCONS_00007184-exon-sc0000074-1575043694:166404..167374 | TCONS_00007184-exon-sc0000074-1575043694:166404..167374 | Clytia hemisphaerica | exon |
TCONS_00007184-exon-sc0000074-1575043694:163972..164139 | TCONS_00007184-exon-sc0000074-1575043694:163972..164139 | Clytia hemisphaerica | exon |
TCONS_00007184-exon-sc0000074-1575043694:163014..163134 | TCONS_00007184-exon-sc0000074-1575043694:163014..163134 | Clytia hemisphaerica | exon |
TCONS_00007184-exon-sc0000074-1575043694:162383..162556 | TCONS_00007184-exon-sc0000074-1575043694:162383..162556 | Clytia hemisphaerica | exon |
TCONS_00007184-exon-sc0000074-1575043694:161284..161396 | TCONS_00007184-exon-sc0000074-1575043694:161284..161396 | Clytia hemisphaerica | exon |
TCONS_00007184-exon-sc0000074-1575043694:160230..160892 | TCONS_00007184-exon-sc0000074-1575043694:160230..160892 | Clytia hemisphaerica | exon |
TCONS_00007184-exon-sc0000074-1510915933:166404..167374 | TCONS_00007184-exon-sc0000074-1510915933:166404..167374 | Clytia hemisphaerica | exon |
TCONS_00007184-exon-sc0000074-1510915933:163972..164139 | TCONS_00007184-exon-sc0000074-1510915933:163972..164139 | Clytia hemisphaerica | exon |
TCONS_00007184-exon-sc0000074-1510915933:163014..163134 | TCONS_00007184-exon-sc0000074-1510915933:163014..163134 | Clytia hemisphaerica | exon |
TCONS_00007184-exon-sc0000074-1510915933:162383..162556 | TCONS_00007184-exon-sc0000074-1510915933:162383..162556 | Clytia hemisphaerica | exon |
TCONS_00007184-exon-sc0000074-1510915933:161284..161396 | TCONS_00007184-exon-sc0000074-1510915933:161284..161396 | Clytia hemisphaerica | exon |
TCONS_00007184-exon-sc0000074-1510915933:160230..160892 | TCONS_00007184-exon-sc0000074-1510915933:160230..160892 | Clytia hemisphaerica | exon |
TCONS_00007184-exon-sc0000074-1491911889:166404..167374 | TCONS_00007184-exon-sc0000074-1491911889:166404..167374 | Clytia hemisphaerica | exon |
TCONS_00007184-exon-sc0000074-1491911889:163972..164139 | TCONS_00007184-exon-sc0000074-1491911889:163972..164139 | Clytia hemisphaerica | exon |
TCONS_00007184-exon-sc0000074-1491911889:163014..163134 | TCONS_00007184-exon-sc0000074-1491911889:163014..163134 | Clytia hemisphaerica | exon |
TCONS_00007184-exon-sc0000074-1491911889:162383..162556 | TCONS_00007184-exon-sc0000074-1491911889:162383..162556 | Clytia hemisphaerica | exon |
TCONS_00007184-exon-sc0000074-1491911889:161284..161396 | TCONS_00007184-exon-sc0000074-1491911889:161284..161396 | Clytia hemisphaerica | exon |
TCONS_00007184-exon-sc0000074-1491911889:160230..160892 | TCONS_00007184-exon-sc0000074-1491911889:160230..160892 | Clytia hemisphaerica | exon |
Position
The following features are aligned
Aligned Feature | Feature Type | Alignment Location |
sc0000074 | supercontig | sc0000074:160230..167374 - |
Blast
The following BLAST results are available for this feature:
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