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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00007173 ID=TCONS_00007173|Name=TCONS_00007173|organism=Clytia hemisphaerica|type=transcript|length=261bp
TCATGAACACGGTCACGGTCATGAGGGAGAGCACGATCACACACATCACG
ATCACGGTCATTATCATTACATCGAGCTTGAGCACGGTCACCACGGAGGA
GGACATCACGGTGGCATGTCTGGCCATCACGGGATAGAAGGTGACTATGG
GGGAGGTGGTGGAGGAGGCTATGGAGATGGTATGGATAGTGGCTTCGGTA
TTCGGGATCATACCCATGGAGAAGGAGGATATGGTGATAGtggtggtggt
ggaggtggCTA Run BLAST on NCBI transcript from alignment at sc0000074:79265..82085- Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00007173 ID=TCONS_00007173|Name=TCONS_00007173|organism=Clytia hemisphaerica|type=transcript|length=2821bp|location=Sequence derived from alignment at sc0000074:79265..82085- (Clytia hemisphaerica)
TCATGAACACGGTCACGGTAAGCACCAAATAGCAAGACATAGACAAATGA
AACTTGACAGAAGCAATGTTGATATTTCGATATATTAATATCATCATCAG
TAATTATTTAGTGTTCTAAAAATGAATAAAGATTAGGCTATTAAAAGTGC
AAGTAAAATTATAAAATGAGACGAAGTATAAGGACAAAATCAAGATAATC
AAACTATCAAATTAACTTTTCAACGTTTTCTGAATATTTAAGACACCTCT
TAAACGTTCATTTCATAAGTATTCCCTTTCAGAAATTGAGTACATGTTTT
CAAGGTATTGAACTGAGAAATCAGCCCGGGGGGGGGGGGGNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNAGCTGACGGGGGGTGCCGCCCGACTTTCGAACTTTGGACCTTTA
CCGGGACTAAAAAGGAGAAAACAAAGGAAAATTTTGGGAATTTTGCGACC
CTTAGCAGGACAAATTTGACCAATTTTGACCAAATTTCGATCTTTCAGGG
AGTAAAAAGTTGAAATTTTCAAATTTTTCGACCCTTATTGGGACTGAAAT
TTGATTTTCTGATTTTTCCGACCCTTAGCGGGACTTTGGAAGTCCAAAAA
AGGTACCCTTAAGGGCGGCACATACCGTACCCTCCATTTGCCTAAGTTAC
CCCCCCCCCGGGGAAATCAGTTTTCTCTTTACCAACACTACAAGTTTTCG
AGTGTTCCGAAACTGCCGAGGTGCGTGATTTTTGGAAATGTAAATAAGTC
CAAATATATCGTACACGTTTTTTTATAAGAACTATATAAGGCTATGATGG
ACAAAATATAAAGAGAAAGTTAAGAAATTTTATGGATTCGCGAACTCTGA
AATACTAGATTTTGAAGGATCATGGACAAAAATAGTCACAAAATGGTGAA
ATTAAGAACACTTTAAGAACATTATTAGGCGTAAAACCCAAAGAATAAAA
ACATGCAAAGGCTTAAGAAATTTTGGATGTTCTTATAAAAAAATGTGTAG
TCTTTTACATACACTTTGTCTTTTTTAATCCTCTACCACCAGCAATATTG
CGACCATGTTTATTGAGAAATCCTTGCCCCACCCGTGATATATTTAAACA
AACAGGAAGTACTAAAAAAATTCACTTATTCTCGATATGACTTTGATTTA
TTTTTAAGGGCTCTGACCATAGTGAATTTTTCATAATTGCCGTGTTTAAA
ATGTGTTTTCTGACTGATGTAACTAACAAAACTATGACATGTTATACATT
TTCTGTTAGACAAACTATTCCTGAATCTGAAAATTCAAAAATTGCATTGA
AAAAATTAGATGAAAAAGAAAATGAAGACTTTTGCGAGGAAGAGTATTTC
AACTTTGAAGAGCTTAGTTTCGGCGAAAAAAAAACATTTTGAAAATTTTT
TCGCAGTACATGGTGTATCTTTTACCGAAAAATAAAAATTTTTGCGGAAA
ATTTTTGTAAATGCTTCTTTGTCTCGAAATCTTCAAAATAGTGGTTTTTC
ATCAATTTTTCATCTTGATTTTGCTTAAAAAAACAGTCATAACTTTTGAC
ACATCTTTTTAAAAATATTTTCCGCAAAATTTGAAATAGTTCAATTCTTT
GCAGACAGTTTGAAAAAAGTTCGAAACAAAAAGGTTAATTACCCATTAAA
ACTTAGCACTTTTTATAAAATAAGGTGATGCAACATATTATTAACGTCTT
TTTAAAGTTCATAACATCATTTTTGCAATTAAGTTCTTAATTACTCTTAA
GGGGTTTGATTAAAAAGCTATTTATAAAGGCAATTCTTTGTTAAAAGTGT
TAAAGAATCTAAAACATAACTTTTATGTTCAGATACTAAAATTAGTTTTC
TGACTATGGTCAGAGCCATTGAGTTTCAAGCCCGAAGGGCTAGAGGTCAA
TCTCTAACCTTTCTCAGGCAAGAAAAATTGAAGCCTTAAAATATGCGCCG
TATTTTTGATGACGGATTGAATCTAGCAATTCCTTTGTTTTCGAGTGATA
TACTTTTCGAAATCAAGCGGTAAATTTTAGTTTTAATCTGTCATTTGTGT
AAAAACCAGGCGGGTCGCTCAAGGCCGCGCAACTTTGGGAGGATTTGTTG
GCTTCAAATCCTACCAAAGAGATTGACCTCTAGCCCTTCGGGCTTGAAAC
TCAATGGTCAGAGCCCTTAAAACTATGTGACTGTGTTTTCAAGTTTCTAA
ACTCAGAGCACTTACTTCAACATTTGAAACAAAACTTAAACCGAATACGC
TCATCTTCTTGATTTCGACATTCACTAGAAAAAAAGGGAGAGATTGTGAA
ATTTTACCTCAATATATTTTTTTTAACAGGTTCAACTTTTCCCCGTGTCA
AAAAATTGATTTCTTAATATAAACTTAGAATAACTAATACTTGGAGACAT
TGATACTTTCCAATTCAATCTTTACAGGTCATGAGGGAGAGCACGATCAC
ACACATCACGATCACGGTCATTATCATTACATCGAGCTTGAGCACGGTCA
CCACGGAGGAGGACATCACGGTGGCATGTCTGGCCATCACGGGATAGAAG
GTGACTATGGGGGAGGTGGTGGAGGAGGCTATGGAGATGGTATGGATAGT
GGCTTCGGTATTCGGGATCATACCCATGGAGAAGGAGGATATGGTGATAG
TGGTGGTGGTGGAGGTGGCTA
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00007173-exon-sc0000074-1575043694:82069..82085 | TCONS_00007173-exon-sc0000074-1575043694:82069..82085 | Clytia hemisphaerica | exon |
| TCONS_00007173-exon-sc0000074-1575043694:79265..79508 | TCONS_00007173-exon-sc0000074-1575043694:79265..79508 | Clytia hemisphaerica | exon |
| TCONS_00007173-exon-sc0000074-1510915933:82069..82085 | TCONS_00007173-exon-sc0000074-1510915933:82069..82085 | Clytia hemisphaerica | exon |
| TCONS_00007173-exon-sc0000074-1510915933:79265..79508 | TCONS_00007173-exon-sc0000074-1510915933:79265..79508 | Clytia hemisphaerica | exon |
| TCONS_00007173-exon-sc0000074-1491911889:82069..82085 | TCONS_00007173-exon-sc0000074-1491911889:82069..82085 | Clytia hemisphaerica | exon |
| TCONS_00007173-exon-sc0000074-1491911889:79265..79508 | TCONS_00007173-exon-sc0000074-1491911889:79265..79508 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000074 | supercontig | sc0000074:79265..82085 - |
Blast
The following BLAST results are available for this feature:
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