TCONS_00007134 (transcript) - C. hemisphaerica

Overview
NameTCONS_00007134
Unique NameTCONS_00007134
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length289

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00007134 ID=TCONS_00007134|Name=TCONS_00007134|organism=Clytia hemisphaerica|type=transcript|length=289bp
CTAGCTTTGTTTCATTTCTGAGGGACACTCCTTGTTGCTTGACGTCTTGC
ACGTCATTATTGACAGTTTACCCGGCGTACGGGTAGAACATTGACATatg
tgttattttttttttcttatgttGACATCATCTTACATGGTCTCAACGGG
TGTTGATCTCATCTTATATGCTTTCAACATGGGGGGGATATAGGATTTTA
TGTCATGTATATATCTTTCTCTTGTTCTTTAGATTAACATTCATAGTTAC
TATAAATAAACATATGAATAAGACATTCTTCAATTTGGA
Run BLAST on NCBI

transcript from alignment at sc0000073:747777..748065

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00007134 ID=TCONS_00007134|Name=TCONS_00007134|organism=Clytia hemisphaerica|type=transcript|length=289bp|location=Sequence derived from alignment at sc0000073:747777..748065 (Clytia hemisphaerica)
TCCAAATTGAAGAATGTCTTATTCATATGTTTATTTATAGTAACTATGAA
TGTTAATCTAAAGAACAAGAGAAAGATATATACATGACATAAAATCCTAT
ATCCCCCCCATGTTGAAAGCATATAAGATGAGATCAACACCCGTTGAGAC
CATGTAAGATGATGTCaacataagaaaaaaaaaataacacatATGTCAAT
GTTCTACCCGTACGCCGGGTAAACTGTCAATAATGACGTGCAAGACGTCA
AGCAACAAGGAGTGTCCCTCAGAAATGAAACAAAGCTAG
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_004002XLOC_004002Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00007134-exon-sc0000073-1491911889:747777..748065TCONS_00007134-exon-sc0000073-1491911889:747777..748065Clytia hemisphaericaexon
TCONS_00007134-exon-sc0000073-1510915933:747777..748065TCONS_00007134-exon-sc0000073-1510915933:747777..748065Clytia hemisphaericaexon
TCONS_00007134-exon-sc0000073-1575043694:747777..748065TCONS_00007134-exon-sc0000073-1575043694:747777..748065Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000073supercontigsc0000073:747777..748065 .
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
1.19894	0	0.819491	1.10271	0.79947	0	1.13522	1.16065	3.9075	4.24874	1.07858	1.75944	2.3666	2.70702	2.15252	1.46418	1.05418	1.15934	0.938632	1.31526	2.66847	2.10943	1.19359	1.33645	1.57684	0.477909	0.0801429	2.2164	0	0
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00007134 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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