TCONS_00007105 (transcript) - C. hemisphaerica

Overview
NameTCONS_00007105
Unique NameTCONS_00007105
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length263

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00007105 ID=TCONS_00007105|Name=TCONS_00007105|organism=Clytia hemisphaerica|type=transcript|length=263bp
AAAGGCGTACAAACAACCAGCCTCGCTTTGAAACGATTACCATGGTGACC
ATCTCATTCGAGACTTTACATTAATCATAAATAGCACGCTTTTaatcatt
taaaacaaaataaaatttacagcacatttttatagaaaaatatattaaat
acacagtattttagaaaaagaataaATAGCTTGAAAACTAAGAAATACTA
AAACAGCAAATGAAAATATACAGCGGAATATTTAACTTAATGTACAGATA
ATCTAAACGAGGT
Run BLAST on NCBI

transcript from alignment at sc0000073:125167..125429

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00007105 ID=TCONS_00007105|Name=TCONS_00007105|organism=Clytia hemisphaerica|type=transcript|length=263bp|location=Sequence derived from alignment at sc0000073:125167..125429 (Clytia hemisphaerica)
ACCTCGTTTAGATTATCTGTACATTAAGTTAAATATTCCGCTGTATATTT
TCATTTGCTGTTTTAGTATTTCTTAGTTTTCAAGCTATttattctttttc
taaaatactgtgtatttaatatatttttctataaaaatgtgctgtaaatt
ttattttgttttaaatgattAAAAGCGTGCTATTTATGATTAATGTAAAG
TCTCGAATGAGATGGTCACCATGGTAATCGTTTCAAAGCGAGGCTGGTTG
TTTGTACGCCTTT
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_003973XLOC_003973Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00007105-exon-sc0000073-1491911889:125167..125429TCONS_00007105-exon-sc0000073-1491911889:125167..125429Clytia hemisphaericaexon
TCONS_00007105-exon-sc0000073-1510915933:125167..125429TCONS_00007105-exon-sc0000073-1510915933:125167..125429Clytia hemisphaericaexon
TCONS_00007105-exon-sc0000073-1575043694:125167..125429TCONS_00007105-exon-sc0000073-1575043694:125167..125429Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000073supercontigsc0000073:125167..125429 .
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0.627542	1.2239	0	0	1.69255	0.668738	0.806804	3.7766	4.23054	3.27513	4.45049	1.67176	1.66943	2.16715	0.356339	1.14722	0.942186	0.965711	0	0	1.21349	0.887844	0.719527	0	8.75893	5.41186	1.72097	3.67333	0	0.709646
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00007105 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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