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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00007103 ID=TCONS_00007103|Name=TCONS_00007103|organism=Clytia hemisphaerica|type=transcript|length=933bp
TCACATGTGTAACCGGGATTCAGTGTCAGTGTATTCTTATTTGTTGGATG
AAGAATCTGCAATGTCCAATCACGTCTCAGGTTACTGCAGAATTCATCCA
CGATGATGCATTGTGTTCCCGTTGTTCTTTTTTTCGCTGATACAAAGAAA
ACCTCTTCAAAACACCCATCCATTTCTTTTCTGcaaaagaaataatttct
ttGGTAATACACTTTCCCATCTTCCATGAAGGACGAAATATCTTTGTACC
ATAGTTCGTAAGAAGGGTACACGTTTTGTAGAAGACCCTTTTCTCGTTGA
ACGAACTTTTTTGCACCCCAAATAAGTTTATCTGTCTCCGACATGCTCTT
TTTTGTCTCTACCATTTTCGATTTCTCACTTTCTTCCTTGATTGTTTGAA
CCACCTTTTCTAGAGCCTTGTTATTATTCTCCAATTCTGACATTCTTTTG
TCCATGTCTCTCAATTTGTCAGCGGTTTCGGCATTTTTCACTCCTATTTC
CGTTTCCAATCCTTTTAGTTTATCACCTTGTGCTATTCCCAAATGCTCCA
ATTTGTTCCCGAATTCGTGTGAGACTCTTTGTTGTCCCTCTTGAATTTCC
TTTATCAACCTATCTAATTTCTTATCGATTTCCTGTTCCTTTTCCGTTCC
GCTTTTTCCACCGGTTCCGATCTCACTTCCTGGCTTACATGACTGTAATT
TCATCACTTCAATGTTATGCTTTAAAGTCTGTATCATGATATCTTTTTGA
GCCATTTCTAACTCTTTGAGTCTACTTTCGTTTTGAACTTCCAAAAGTTT
GATTTTGTGCTCATAAGTCAACACTTGTATTTTCTGTTCATAATCGTCTT
TCATTTTCGACATTTCTTCTTTCATTCTTTGAATTTCAtcgccattttga
tttggtTTCAAACGCAAAGGGTCAGTAGCGCAG Run BLAST on NCBI protein sequence of TCONS_00007103-protein >TCONS_00007103-protein ID=TCONS_00007103-protein|Name=TCONS_00007103-protein|organism=Clytia hemisphaerica|type=polypeptide|length=310bp
CATDPLRLKPNQNGDEIQRMKEEMSKMKDDYEQKIQVLTYEHKIKLLEVQ
NESRLKELEMAQKDIMIQTLKHNIEVMKLQSCKPGSEIGTGGKSGTEKEQ
EIDKKLDRLIKEIQEGQQRVSHEFGNKLEHLGIAQGDKLKGLETEIGVKN
AETADKLRDMDKRMSELENNNKALEKVVQTIKEESEKSKMVETKKSMSET
DKLIWGAKKFVQREKGLLQNVYPSYELWYKDISSFMEDGKVYYQRNYFFC
RKEMDGCFEEVFFVSAKKRTTGTQCIIVDEFCSNLRRDWTLQILHPTNKN
TLTLNPGYTC Run BLAST on NCBI transcript from alignment at sc0000073:65379..66311 Legend: exonfive_prime_UTRCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00007103 ID=TCONS_00007103|Name=TCONS_00007103|organism=Clytia hemisphaerica|type=transcript|length=933bp|location=Sequence derived from alignment at sc0000073:65379..66311 (Clytia hemisphaerica)
CTGCGCTACTGACCCTTTGCGTTTGAAaccaaatcaaaatggcgaTGAAA
TTCAAAGAATGAAAGAAGAAATGTCGAAAATGAAAGACGATTATGAACAG
AAAATACAAGTGTTGACTTATGAGCACAAAATCAAACTTTTGGAAGTTCA
AAACGAAAGTAGACTCAAAGAGTTAGAAATGGCTCAAAAAGATATCATGA
TACAGACTTTAAAGCATAACATTGAAGTGATGAAATTACAGTCATGTAAG
CCAGGAAGTGAGATCGGAACCGGTGGAAAAAGCGGAACGGAAAAGGAACA
GGAAATCGATAAGAAATTAGATAGGTTGATAAAGGAAATTCAAGAGGGAC
AACAAAGAGTCTCACACGAATTCGGGAACAAATTGGAGCATTTGGGAATA
GCACAAGGTGATAAACTAAAAGGATTGGAAACGGAAATAGGAGTGAAAAA
TGCCGAAACCGCTGACAAATTGAGAGACATGGACAAAAGAATGTCAGAAT
TGGAGAATAATAACAAGGCTCTAGAAAAGGTGGTTCAAACAATCAAGGAA
GAAAGTGAGAAATCGAAAATGGTAGAGACAAAAAAGAGCATGTCGGAGAC
AGATAAACTTATTTGGGGTGCAAAAAAGTTCGTTCAACGAGAAAAGGGTC
TTCTACAAAACGTGTACCCTTCTTACGAACTATGGTACAAAGATATTTCG
TCCTTCATGGAAGATGGGAAAGTGTATTACCaaagaaattatttcttttg
CAGAAAAGAAATGGATGGGTGTTTTGAAGAGGTTTTCTTTGTATCAGCGA
AAAAAAGAACAACGGGAACACAATGCATCATCGTGGATGAATTCTGCAGT
AACCTGAGACGTGATTGGACATTGCAGATTCTTCATCCAACAAATAAGAA
TACACTGACACTGAATCCCGGTTACACATGTGA Coding sequence (CDS) from alignment at sc0000073:65379..66311 >TCONS_00007103 ID=TCONS_00007103|Name=TCONS_00007103|organism=Clytia hemisphaerica|type=CDS|length=930bp|location=Sequence derived from alignment at sc0000073:65379..66311 (Clytia hemisphaerica)
TGCGCTACTGACCCTTTGCGTTTGAAaccaaatcaaaatggcgaTGAAAT
TCAAAGAATGAAAGAAGAAATGTCGAAAATGAAAGACGATTATGAACAGA
AAATACAAGTGTTGACTTATGAGCACAAAATCAAACTTTTGGAAGTTCAA
AACGAAAGTAGACTCAAAGAGTTAGAAATGGCTCAAAAAGATATCATGAT
ACAGACTTTAAAGCATAACATTGAAGTGATGAAATTACAGTCATGTAAGC
CAGGAAGTGAGATCGGAACCGGTGGAAAAAGCGGAACGGAAAAGGAACAG
GAAATCGATAAGAAATTAGATAGGTTGATAAAGGAAATTCAAGAGGGACA
ACAAAGAGTCTCACACGAATTCGGGAACAAATTGGAGCATTTGGGAATAG
CACAAGGTGATAAACTAAAAGGATTGGAAACGGAAATAGGAGTGAAAAAT
GCCGAAACCGCTGACAAATTGAGAGACATGGACAAAAGAATGTCAGAATT
GGAGAATAATAACAAGGCTCTAGAAAAGGTGGTTCAAACAATCAAGGAAG
AAAGTGAGAAATCGAAAATGGTAGAGACAAAAAAGAGCATGTCGGAGACA
GATAAACTTATTTGGGGTGCAAAAAAGTTCGTTCAACGAGAAAAGGGTCT
TCTACAAAACGTGTACCCTTCTTACGAACTATGGTACAAAGATATTTCGT
CCTTCATGGAAGATGGGAAAGTGTATTACCaaagaaattatttcttttgC
AGAAAAGAAATGGATGGGTGTTTTGAAGAGGTTTTCTTTGTATCAGCGAA
AAAAAGAACAACGGGAACACAATGCATCATCGTGGATGAATTCTGCAGTA
ACCTGAGACGTGATTGGACATTGCAGATTCTTCATCCAACAAATAAGAAT
ACACTGACACTGAATCCCGGTTACACATGT
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this transcript:
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00007103-exon-sc0000073-1491911889:65379..66311 | TCONS_00007103-exon-sc0000073-1491911889:65379..66311 | Clytia hemisphaerica | exon |
| TCONS_00007103-exon-sc0000073-1510915933:65379..66311 | TCONS_00007103-exon-sc0000073-1510915933:65379..66311 | Clytia hemisphaerica | exon |
| TCONS_00007103-exon-sc0000073-1575043694:65379..66311 | TCONS_00007103-exon-sc0000073-1575043694:65379..66311 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000073 | supercontig | sc0000073:65379..66311 . |
Blast
The following BLAST results are available for this feature:
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