TCONS_00007083 (transcript) - C. hemisphaerica

Overview


Name	TCONS_00007083
Unique Name	TCONS_00007083
Type	transcript
Organism	Clytia hemisphaerica (Jellyfish)
Sequence length	4164

Sequence

The following sequences are available for this feature:

transcript sequence
transcript from alignment at sc0000073:546825..560634-

transcript sequence

>TCONS_00007083 ID=TCONS_00007083|Name=TCONS_00007083|organism=Clytia hemisphaerica|type=transcript|length=4164bp
AATATACAGACCTTTTGGTTTTGATGGTCGACTTCTCTCAAATAGATGCT
GTTTGTTTTGGCTGGTATGTACAGTCGGTGAATCATTCTATCGGAAATAA
CTGATTCGAGAGAAAACATGACATTTTGACTTTAACTTGATTCCTGTTTC
AACTAAATGTCTACGAAGGAAATCAACGGAAAACTTTTATAGCTCGTACT
TGTGACCGAGCATAGAAGATTGGTACTCACCCGACCAACTGACAAATGAT
GACGTCCTCAGAAAACGTCACAACGTCAATACGAATCCGTCAAAAGCCGC
CCCGTCGACGAAAATCAGCTGACGAAAGCGTACAACAGCCGAGCGAGAAA
CTGCGGATGGTTCACAGCCCAGGTGGTGTTTATTATCTTCAACAGAAATC
CGTGTCCCGAAGCTTGGATGATCTGATTAGCTCGGATGACAaagataatg
acgtcatcatggtAAATGGTAGCCCTAGCAGTGATGCGTATCAGACAGGT
TTAACGGTGAAGAGCGCGGCCGTAATAAGATTGACGGGCGGAAAGGAAGA
GGACAATCACGAAGCGGTtagtaaaacaaaagaagagttAATTGGTGATC
GGAACAATAACTCGGTTGCTGAGTTGACAAAACCGCATAATGAGAAAAGA
GGACCTTACATTGCACTTTTGAAGTCTGATGGAGATGTTTTGAATGATGG
TAAACAATATCAACAGAAACGTAAAATGCGAAATAAATCGACTTCTGATG
TTATCGATGAGGATGATTCGAAGACTTTCTCCATTCAACATCCCAGTGAT
GTATCAGCCAGTGTGGATAATATTTATGAGAATGGACTTTATACCAAGCT
GATGGAATCTGACACTGAAACGCTGGATGGTTCTTCCCTGACCCTTTCAT
CGAGGTCATCGAGCAAATCGAGACCTCCAAAACCGAAGCGATCGAATGCG
TCTTTGAATCGGACTTTTGATTACGATCGAGCTCGTATTCTACCGCCTCT
CGATATTGGTGATGAGGAGGTCTCGAAATATCATCGAGAATTGAATACTT
CACTCGATGAACATAACAATTTGTCGATGTCGAAAGAGAATTTTGAGGCG
TTCATTTCTCGTGAGAAGAAGAAATATAGCGGACAAGTGTCAAATTCCGG
ACATGATACAACTTTTCCTTCGGATGAAGAGAATTCAGATATCTCCAGAA
GTCGAGTTCATTCATGGGGAAGCGATTCTGCGAACATGTCTCAACGCTCG
TTCGATTTAGTCGAGCAAAGAATCATCGATGAATCGAAAGTCAAAGAAAT
CGGAGAAGTTCTTGATTCGCAACTTCACTCTTTAGAAACTCTTTTATCGA
CAAGTGCCCCTCCGCGACGTTCGAGTGCCAGTTATCGGTCCCGTAGTGTT
GAAAATATCAGCGAAAAGAAACGATTAAGCGCAATCGAGGAGACGCATTC
TCGAAACAATTCGAGACGAAACATGAATCGGTTATCGTACGATGTTTTAT
CCGATAAGAATTACGTCGAACCTCAAAACAGGAAAACTTTACCGAAAGTT
CCACAACGACCTACATCGTTAAAAGATCGAATGAAATCGCTTAAACGTTC
ATTGTCATTATCTCGTAAGCGAATCGTGAAAAAGAGTGGTCGAAACATCG
AATTCCCTGCCATCCGAAAATCGATTCGCCTTCCCAATTCCTCGAAATCG
ATGCGCCCCCGAAAACGATCTGTCTCGTTGAAAGACATTTCCCAACGAAA
AAACTCTAACGGTGTTTTAAACGACGATCAAAATGTCGTTTTACGCCGAG
AAGTTTCGGCCCGACGACTTTTCCCCGACAATCGTTCGTCTCGTGTCATC
GCGCACGAGTGTGACGTCATGAAAACACAATTAGCCGCTGAAAGACAAAA
GATCGAGGAAGAAAAGAATCGATTGAGCGATTTGCGTCGAATCGCATCGG
AAAAAGCTGAACTGGAATGGATCGAGAAGAAACGAGATTTGGAACGTCGT
GAGATCGAGGAGAAGGAGCTGGAAAACAAACGAGAAATGTTGGAAAAGTT
GAAGAAGGAACAAGAAGAGAAAGCAGAACAAGAACGACAGGTCATCGCTC
AACAAAccgaaaaaatgaaattacaaGAAGATCTTCTCAAGCAACGCGAG
CGGGAACTAGCGGAACTACACAAAGAGCGGGAGAGAAGAGAAGAGTTGGA
ACGGCTTCTCTTACACGAACGAGCGCAAGAAAACGTCCTCGAACGAACGC
TGAAtcaagagaaagaaaaattcacgACGCTGGAACGAAGTCTTGCGGAA
GAGCGTTCCAAACGAATGGAAACGGAGAAAagATTACAAGAAGAAGAGAC
GAGGAATCGAACGCTAGAACATAAACGCGGTGGCGGTGATACGCGAAGTA
ACGGTGCAATGAGCGGTAACGGAACTCTCAAACGGCGTGTCCCTTCATAC
ACACTATCGATCCGTTCCGGTCAATCGGGAAATTCGGAAGAAGTCAACCT
CCTCCATCACGTTGTAGCAGCGGGACACGTCATTGAAAATTGTCCGGCCG
TCAAAATCAACCGCTACTCGTGTAGAGGGTATCTCTTGAAGATGGGAAAA
TCACGGCTCAAAGTTTCCTGGAATAAAAGGTGGTTCGTGTTCGATCGGAA
ATTACGCGCGCTTTTATATTACCAAGATGAACGAAAGACAAAATCGAAAg
gcattttatattttcaatctaTACAAGAAGTTTACGTGGACAGTAGCATT
AAGAAAAGCCCGAACTCTAAGACGACTTTTTGCGTGAGGACGCCTCAAAG
GAACTTTTATCTTTCTGCACCTTCTCCTATTGCCATGAGCATTTGGATTG
ACGTCATTTGTACCGGCAAAGAAGGTGCTTTCACTAGTATGACCTTATAA
GGAGGTTGGATATCCGTATAAGGAGTGTTCGGTTGATTATGTGTGTCCAC
CTTAACAGAGTGTGACTGGTTTGGTCGATGACCTTAAAGTGTCACCTGTT
TTACATCTGGTGGAATTGGATAAACCTTGGTTGACAACCCTGGGCCGAAG
TCCGTAGAAGCGCTTGCTTGGGAAACAGTTGTAAAGAACATCACTCCCAG
AGATGATTATAAGATGGCTATTGAACAAAAGGAAATTATGCGATGTTAAA
TGTTTGGAGTGATAATGTTAGAGCAACCTATGGTCGCTAACATGATAATT
AGTTAAAAGGCCGGATGCGTGTATGACTGGTTGCAATTTTGTCGTCATGT
GCGACATATAGCTCTGTTTTAATTTAGCAATAAATTTTCTGGATCTGGAG
ATTCGCAATAATTTCATCTCGCCGAAGAAATCAGCCGAAAATTTGTGTAC
CCGTAAACGACAAAAAAGCATATTTAcagttttgaaatcttttgaagaGT
TTTATTTGCCCGAAAAGGGAAAATGCGTAATTAAATCTCGCAAAAATCAA
GTAGCATAGAATAAAACTCCAAGTTAAAAATGTGAATGATATCAAAACCA
AAAGTCTCTAAACCAAAAAGGCTGAAATTCCTTTTAGTGAAGAAATGTTA
GCTAATACATTAAATCTTtactttagattttttatttataactttattta
tattttgaaaatcttgaattttttacATTGCTTTCAACAATTGAAATTGT
TAGTGTAGGTAACCTGTTGCGACTTTAACCTAAGAGTGCCACTCTACGAG
CTTCttatcgcgccatccagtctattacaaagctttaagtggaccccgtc
TCTAGAATATTTAACCCATTATTCTAAGCTGACTGAAACCGTGTCGACAC
TATTTTTTAGTGCagaaaatgcattttttttaaatatccaCTCATCCTTC
TTTCTCTCatctttgaatttgttttgttttttaagaattctatataaatc
aatatttttttgtcaCAGTAACGTATTTTTTGCTATGTAAACCAACCATC
ACATGTGATTTTCCTCGAAGCACTCtctatgtgtgtgtgtgtgtttgTAA
ATAGATCATTTTTTGTATTACCCATAAACCcatctttttgcaaaatgaaA
ATACCAAAACATAAGACGAATTCTTTTGTCTTTCAGACACagtgaagttt
ttttaactcgaaactcGATAACTcaatatctccttaactcgaacaagcgT
TATGTTCACTTCAG

Run BLAST on NCBI

transcript from alignment at sc0000073:546825..560634-

Legend: exon

Hold the cursor over a type above to highlight its positions in the sequence below.

>TCONS_00007083 ID=TCONS_00007083|Name=TCONS_00007083|organism=Clytia hemisphaerica|type=transcript|length=13810bp|location=Sequence derived from alignment at sc0000073:546825..560634- (Clytia hemisphaerica)
AATATACAGACCTTTTGGTTTTGATGGTCGACTTCTCTCAAATAGATGCT
GTTTGTTTTGGCTGGTATGTACAGTCGGTGAATCATTCTATCGGAAATAA
CTGATTCGAGAGAAAACATGACATTTTGACTTTAACTTGATTCCTGTTTC
AACTAAATGTCTACGAAGGAAATCAACGGAAAACTTTTATAGCTCGTACT
TGTGACCGAGCATAGAAGATTGGTACTCACCCGACCAACTGACAAATGAT
GACGTCCTCAGAAAACGTCACAACGTCAATACGAATCCGTCAAAAGCCGC
CCCGTCGACGAAAATCAGCTGACGAAAGCGTACAACAGCCGAGCGAGAAA
CTGCGGATGGTTCACAGCCCAGGTGGTGTTTATTATCTTCAACAGAAATC
CGTGTCCCGAAGCTTGGATGATCTGATTAGCTCGGATGACAAAGATAATG
ACGTCATCATGGTAAATGGTAGCCCTAGCAGTGATGCGTATCAGACAGGT
TTAACGGTGAAGAGCGCGGCCGTAATAAGATTGACGGGCGGAAAGGAAGA
GGACAATCACGAAGCGGTTAGTAAAACAAAAGAAGAGTTAATTGGTGATC
GGAACAATAACTCGGTTGCTGAGTTGACAAAACCGCATAATGAGAAAAGA
GGACCTTACATTGCACTTTTGAAGTCTGATGGAGATGTTTTGAATGATGG
TAAACAATATCAACAGAAACGTAAAATGCGAAATAAATCGACTTCTGATG
TTATCGATGAGGATGATTCGAAGACTTTCTCCATTCAACATCCCAGTGAT
GTATCAGCCAGTGTGGATAATATTTATGAGAATGGACTTTATACCAAGCT
GATGGAATCTGACACTGAAACGCTGGATGGTTCTTCCCTGACCCTTTCAT
CGAGGTCATCGAGCAAATCGAGACCTCCAAAACCGAAGCGATCGAATGCG
TCTTTGAATCGGACTTTTGATTACGATCGAGCTCGTATTCTACCGCCTCT
CGATATTGGTGATGAGGAGGTCTCGAAATATCATCGAGAATTGAATACTT
CACTCGATGAACATAACAATTTGTCGATGTCGAAAGAGAATTTTGAGGCG
TTCATTTCTCGTGAGAAGAAGAAATATAGCGGACAAGTGTCAAATTCCGG
ACATGATACAACTTTTCCTTCGGATGAAGAGAATTCAGATATCTCCAGAA
GTCGAGTTCATTCATGGGGAAGCGATTCTGCGAACATGTCTCAACGCTCG
TTCGATTTAGTCGAGCAAAGAATCATCGATGAATCGAAAGTCAAAGAAAT
CGGAGAAGTTCTTGATTCGCAACTTCACTCTTTAGAAACTCTTTTATCGA
CAAGTGCCCCTCCGCGACGTTCGAGTGCCAGTTATCGGTCCCGTAGTGTT
GAAAATATCAGCGAAAAGAAACGATTAAGCGCAATCGAGGAGACGCATTC
TCGAAACAATTCGAGACGAAACATGAATCGGTTATCGTACGATGTTTTAT
CCGATAAGAATTACGTCGAACCTCAAAACAGGAAAACTTTACCGAAAGTT
CCACAACGACCTACATCGTTAAAAGATCGAATGAAATCGCTTAAACGTTC
ATTGTCATTATCTCGTAAGCGAATCGTGAAAAAGAGTGGTCGAAACATCG
AATTCCCTGCCATCCGAAAATCGATTCGCCTTCCCAATTCCTCGAAATCG
ATGCGCCCCCGAAAACGATCTGTCTCGTTGAAAGACATTTCCCAACGAAA
AAACTCTAACGGTGTTTTAAACGACGATCAAAATGTCGTTTTACGCCGAG
AAGTTTCGGCCCGACGACTTTTCCCCGACAATCGTTCGTCTCGTGTCATC
GCGCACGAGTGTGACGTCATGAAAACACAATTAGCCGCTGAAAGACAAAA
GGTGGGTATTTTCAAATGTTTTACTTCTTATTTCGCTCACGACACTAGAC
TGTGAGATGAGCCGATTTTTTGTCTAGCCTCTATCCAGATACAAAATTTT
GTGTTGGAATTGTCTTTAATCAATCAACTTCTCATTTGGAAGCCTAGAAA
AGAATATTGGCTTAATTTGCCCTCTTTTGATAATAATTTTGGTATTCCAA
ACACTATTTTTCATGTTTTTGATGAAAGTTTAATGATGTATATATTTTTT
TTGGTTCACTTTGTTTGTTTAATTGGGTTCATTTTTAATTTATAATTTTT
TTGATGTAAATTGTTAATAAACGTATTTTAATAGAAATCTTTACGAGTCC
TATTTTTTTCTGTTTGAGCAGAAGTTTTACCATAAGTTTGAGATATTTAT
AGAACTACTCCGAAAGAAATTATTCCTTATCTTCTCAAAGTTGTGTTTAA
ATTACGAGTTAGTTAAGTAGTCTTGATAACAACATACGTATTGGGTGCAC
TTCCATTTTTATGGGAAAACTGGCGATGCCGTTCCAGTGAGGTAGTTAGA
GATCAGTGATGCTCCTTGAAATTCGAATCTGGAATTCTCAATTTGCTTGC
TACATGAAAGTACCTTGTGTTTAAGTGGATACGAAGTTAGTCAAATCAGA
AAATTAATAGATATCAAAATTTGACAACAACTCGAAAGTTTTGTTCTCCG
TTCGAGAACGTCATAGTTGAAATCTAACAAGTTCCAAAAATTTTTTTGGA
GAAGTGACGACAATCTTGGAGAGATTACGAATCTTTTCCTAGACAAAAAT
AATTAATTGACACGCTTTATTTAATTTGTTCATAACCGACCATAACTCTT
ACCCGAATTTCCGATCAAAACCTTTCCGGATTGAAGATTTCTTTCCCAAA
TATGGTCGGTATAAAATCGTCGGCCAAAAGTGTCGAAAATAACTCTAGGT
GACAAAATGTTTCCCGCCGTAGATGTTTTCTCCGACGTGCTGAAACCTCG
ACTTTTTATCTTCAATAAGGTATATTGATCCAGTATATTCCGAAAGTGCT
CATGTTTTTTTTCTGGAATTTTGGCTCGTTTATTGTCTATTGTGTAATGG
TGTTATCACGCCGCAGTAGAATTGATTAGAAGAACACTTTGGTTTTGATC
TTCGAAACGGAAAAGCGATCACCAATCTACATGTGGTTCTGTGTTTCTCT
CTGTAGCATAATTCATAAAGTTTTTTTTATAAGAACAAAGGGTCTAAGAG
CATCAAAACCTTCTTATTAAATATAGACCGTCTAATATTTTCAAAGAATA
AATAAGAATTACTTCTGATATACATGTTTTTTATAAGAATATCCAAAATT
TTTGAAGCCGTGGATGATCTTAACTTTTTGGGTTTCAAGCCTAAAACTGT
TCTTTATGTTCTTATTTTTCGCATTTTTTGAGTATTTGTGTCCGTTTTCC
GAAGAAAACAGGTGTTTTAGAGCCCTCGAAGCCTTTAAATGTTCCTAAGG
TGTTTTTAAGATTTTGGCAACCGAAGCATTATTAGTAAAGTGAAGTTCTT
ATATAGTTTGTTCTTATAGAAAAATGTGTAATAAACATTGCAAAAGCTAG
GATAAAGATCTTGATGATAGATGCAGGGGAAATGCAGACATGTTTTCAAC
ATCTTACAAAAAAGATTTCTCTCTGTTTTTCTTTCACTGGTATCTTACAT
TGTGTGGATTAAGTGACGCAGATAAAATACTTTGACTTCTTGTGTTTCAC
TGCTTAATGATTCAGAAGAAGTAATTAACCGTTCTACCAATCAATTAATC
AATTAGTATTTCCATTCGAAAAATATGAATGCTCTTTCTCCATCAATAGT
TTGGTTTTTTTCTCTCTTGTTAAATCATGGGAACATATTGATTACTTCAG
ATTTGACATAATTCTCCATATTAACCTGCAGTACTGCCATTGAGATTTTA
GTCTTTGTGATTTTCATTTTTGTATGGGTATAATTTCTGATTGTATTTGT
TTTCATTTTGTGAAGAAGAAATTTAAAGATGGTGTTGACAGTTCATTTGG
TTGGTTCATTTTCTCTTTTTTTGACGATCCCATTTTGTTGCTTATCTAGC
ATAGTGTTAAAAGATTTGTACTAGTAATCTCATGGTTATAAGGGAAATTC
GGGATAAATTTCCCGAGGTCAATTTTGAAATTTTTTGAAATTTCCCGAGT
GCAACGAGGGANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNTTCCAAACGATGAAAATTTCAC
TTTTGCGGGAAATTACAAAATCTAGGAGGGAAATTACAAAAGCTAGGAGG
GAAATTACAAGTTCGCAGGAAATTACAATTTAACGTAAGCAAAAACGTCA
ATCGAATTTCAATCAACCATGAGATTACATTTAGAATAATTCTTCTAGCG
CTCAATAACTTTTAAATTACTCAAACCCATTTCTTTAAATCGTTTCTTTT
TTGTCAAAATTCATTGATTTTCAGTCAAAAAAGCTGAAAATTCACTCCAT
ATTTTTTAGCATCAAACTCAGGTTTTTCACTGTCCAATGTCATAGACTTC
TAACAGCCTCAATAAATAATACTCAGCATGCTTGAAAAACATTAGATTTT
AAGAAATAGCTGTAATAAGGGTCAACTTAGCCCTTTAGAATTCCACTTTG
AATCAATGCCATCTTTGAACAAATATTTAACAAGAATATTTTTTGCAAAG
GTGCGTCACGAGATGGGTAGACTAGAGTCTACTTCTGACTGAACTTTGCT
TTCTGATGGTGCTGAGTCCAGTAAAGTAGACTAGAGGATATCGCCAAACT
TTGAAAACAATCAATCCCTAGGTCACAATTCCCTGTTTGTTTTTCTCCAA
AAAGGGACTGGATCTAGTGGCATGGATTTGCTACCACCTCAAAAAATGGA
GCATGCCAAATTACACCGTCCAGTCTATCAAAAAGCGGCCCCAGACTACA
AGATGGGTGACTGGCGGCAAAATTAGGTTGTTAGTTACGTTTGCGGTAGC
GCCCATTGTACTGTCCCTGTTGGCAGTTCCTTTTTCGAGAGATAAGTCCC
TGAAAGAGTTCTTTTTTTTTTCAGTCCCATTCTCATATGCAGGGTCCACC
ACATTCGGTCGACAAGGGTAGCACCACCGTCCCGGCTTTAAAGCTCCATT
CTCAATGGGAGCCAAAACAAGCGTGATTACCCACCTGTTCGTCTTTCTGC
TATTAGCACATTTGCCAAATATAATTTTGTTACTGGTGCCATTTCAAAAT
GATGATGATCGCCTTTTAATTTTGATTGGTGGATCGTGTTTATCCTTGTG
GCCTCGTTGCGGTGAAAAGTCTTTACTTTAAAAGTACTTTTTGCACATTG
TCAGTTTCAATGATTAGAGTTAATTGGTGGATGAAGGTTTGAGTGTATGC
AATAAAATCTGCAATGTAACAATTGAGCTGACTTTTTGCGAAATTTGCAT
TTATTACTCAGATACTATCATTATGGACAAATCAGAATGTCTCTTTTTCT
TGAATCACAATCTTCTGTTTTTGATTCCCCCTATTTTCAAGAAAGCCACA
AAAGAGTTCGTTGTTAAGCAAAATTTTGTTTTACCTATGCATAATGAACT
GGATTCATTTCCAGTTTTATGGGACCAATAAGAAAAGAGGCTCGTAATTT
CTCCCTAATAGTCAATATCAAATGATTTCCGAACAATCTTCGAAATGACC
TGTTGAGGCCTCGATACTTTATTACTTCATTTCTCACAGTAGTTAGGTGT
AGAGTTTTATCTCCATGGCAATGGAGTTAAATAAGCCATGCTATATATTT
TACTTTTGGTTCAGTTTATCCTTCATGTAAATTAGATTAAGATTATTTTT
AATGTTTGAAAGAGATCGTTAACTTTTATGAACAAGAAATCTTTAGAATC
CTTGTTTATCACGGACTTCTGTAAAAGGAATTGAATCTTTAGTGACGAAT
ACCGTTGTAAATCTGTAGTGTAGACTAATGCTATTTCAAGTGAGGTATAC
GTCTTTCTTCTTTCTTTTGATTTCAATTTCGTTGACCTCATTTTTGCCGA
TTTTATATACCGTTCTTATCATAAAAAAACTTCTTCTTTTTGTTTTCTTT
TTTCATCTTTGAAACTTTTTGAAATCATCCACTCAAAATTATCCTTCTAG
CGATGTATCACTACAACCGTTCAATAAGTATTTAAGGACAAGTATCAAGA
AGCAGCGGCTGTTAATGCTCTTGGAAAAGATTTGATGGGGGCCCCTAGTG
GGTTGCGTGAATGCGTGAATGGGCATTTTCGCTTGCGTGAATGCGTGAAA
ATTGAAAAAAGAATACGTAAATGCGTGAATTGAAAAAACTGGCGTGATTG
CGTGAATTGAGGGTCCGCTGCGCTGGGGGGGGGGCTCTTTGATCAATGAG
TGCTCTCAAATTGACTCTTTTTGGCGTCTCTGCATGGAAACTATTTAATC
TTCGAAATTCATCGCAAAATGAACCTTAAATTAAATTCTCAGCATTTCAA
ATAAAAAAGGCCATTTGCATTTTCTTTTGAGAAAATTTAATATTCATAAT
TTCTCCTCTATGTTTTCAATGCGGTCACTATGTTTATGAAGACAGTTGAA
ACATTTTATCATTTTCTTACAAGCTTGCGGGATATTTGATAAGGGGACAA
TTTTCAAAGTTATATTTTGTTACTGTCTCCTCTTAAAAATGAAACTTTAC
ATTTGTGTGGTTTCAACGATGAGTCCCTTATTGTGAGTACTCGACTTCAT
TTTTCTATTCCTTCGACATGGTCTCCTCTTAACACAATATACGTCGTCTT
TGTTCTTTTAGAAAGAATAGTGATTTTATACTGAAAGTACAATTCCATTT
TTCTTTCTGACTTTCCCCAGAAGGTATTAGTGAACTAACCAGAAATATTA
AACTGATGCCATAAAAACATTTGTATTTAATCCAATATGCAACAAGATTA
AAAGTAACTTAAATCACTTTCCTCTTCTCTTCTATTTGTAAAACACCGAC
TCCCTGACTCATTACATCACCAGAATACTTGGTTTTAAGAGCTAATAACC
GAGTGTTTTTAAAAAATGCGCAAAAATATTTTTCCAAACGTACCAAATAT
GCGGAAGTTTAAACCCTCAAGTCTCAAGCTACAAACTCGATGAAGCCAAT
CTAAACTTTCCGAAGAAATTACAGCTTCGCGAAAGGGTTAATACCTTGCT
CTTGTTGAATGCGTGCATTTGAAAAGCTATATCTTAAACAACACACTGAA
ATCGGAGACTGAATTGCAATTTTTTTAAGTACCTGAAGTATATTCTGTGC
TTTCGATGTTTAATAAAACAGTGTTTCGGTAGTTGCAGTAGAAGAGTATC
ATTTTCAGCGAGCGTTTCAGATCATGTTATTGGTGAGAATATTTTCGAAA
CAAGTTAAGACAGAAACAAATTAGATTTCAAGATTTGACGAGTTGGCTAT
CGGTATTTGGTTGGGTTTACACTGTTTGCGGAAAGTTGAAATATACAGGA
AGTAACATTTAATATTGCGCAGAGTCGGTCAGGAATTCGTTTTGTTATAT
AGCATATCTTCTCATGTTTTTGATTTAGCAAAAAATTGAAGCAACACAGT
TAGAGATTTTATAGTACGTAATTGCTTTTTTTCACTCACATAAATGGATA
TAAATGGTCATAAACTATATAAGGGCAGAAACTTCCGCGATTTTCGTGAT
TTTTGCCCATTTTAGTGAAAGTTTCTGCCAAGTAAGAAATTACACGAGAA
ATTCGCGAAAGTTTCCTTCGCGAAAAATGCATTTTTTTTGCTATTTTATA
CTCAGTTTCCAGTCTTTGTGCATTTTTATCGCTTTTTTGCCGGCAAAATG
AAATAATAACATTCTAAAATTAGCAGAAGTTATATCCGCTGAATTCGCTC
CAAAAGTAAAACCTTACGAAAGTTTCTGCTCTTAAAGTAGAAAGAACACA
AGCGCATAGCATGTGTATACTTTATTTATTCGTTGAACGTTTAACGTAAT
TTCATCGATACTTTTCATGGTAATAATAACCCTTTACCTCAAACGTTTTA
ATGATGGAATCTTCTCGTCTTATTTCAGATCGAGGAAGAAAAGAATCGAT
TGAGCGATTTGCGTCGAATCGCATCGGAAAAAGCTGAACTGGAATGGATC
GAGAAGAAACGAGATTTGGAACGTCGTGAGATCGAGGAGAAGGAGCTGGA
AAACAAACGAGAAATGTTGGAAAAGTTGAAGAAGGAACAAGAAGAGAAAG
CAGAACAAGAACGACAGGTCATCGCTCAACAAACCGAAAAAATGAAATTA
CAAGAAGATCTTCTCAAGGTACCATTATTATATTTCGTTCGTTCGTTCGT
TCGTTCGTTCGTTCGTTCGTTCGTTCGTTCGTTCGTTCGTTCGTTCGTTC
GTTCGTTCGTTCGTTCGTTCGTTCGTAGTTCGAACCTCGCCTCTCAAAAG
AAAAGATCTTGTTTGGTTTGAATCTCGGATATACATTAAGAGTGTTGCCA
TCATTTTACCATGTCCGGGGGTGTGTCCACTCAGTTGATAAGGAAAGTCG
AAACTTGACTCGAAGGTGAGGCCACTGTTGGCGTGTGATCTCTAGTTGTC
TTTCAATGCCTATAGTGAGAAAGAATTCATATAACCTGAATTTCAAGCTC
ATCTAACTAAGTAGCACGAGGGCGTTCTTTTCCTGTCTGCAGAATACACG
CCTTTTTGATGAGAATGGTTTTTTCCATTCGATCATGGATATTCTAAGGA
ACTTGGATATTCTAAGGAACTTGGATATTCTAAGGAACTTGGATATCCTT
AACTTTCAAACAAAAGTCGTTTTAGAATATTCTCAACAGCATTCTCAGGT
TGATATCCAAAACCAAAAGCGTGTATTTTCCAAAGTTTTGTCTGATATCT
TTTGAGCGAAAGATAAAATCTAGTGAGATTTCTTCCGTCCTTTCTTTCCC
TTCTTTGGGATTTGATTTTAATCTTCTTTTTGATTTTTCGTGTTGCTTTA
AAAAGTGCCCCGTTTGAAGATGAAGTTTTTGAAATAAAAGTTGAAAGAGA
TAAAACAAAACAAAAATTAGATAAAAATGTCACTTTTCAATAAAATTTAA
TCTTCCTTCGGGAAAACTAATTATTGAGAAAGAAGTGATGAGTATTGGGA
AAAAAAAGGGAAAATGTATTATTTTTCNGAAAACTAATCATTGTATAGAA
ATAAGTGGAGAAAGAGTATTGGGTAAAAAAAGGGAAAATGTATTATTTTT
CAAGTCCTCGAGTTATGTTTTTCAACAATTATCAATCAGCTTATTATGTT
AGCACGCTCTCGAGATAACCTCCCATCTCATCTCATCTTCAAATTTCTTC
TTTTTTCTCTACTCATCAATTATTGATGACTCAGCAAAAAACGCTGTTTT
AGAAGTGGGGAGAATTCTTTGGACTTTTAATAAATGATGATGGATGGATG
GATGGATGGATGGACAACTCGAGAGGATAGATATGCGTTGATGATGGAGA
GCTTTCTTTTCAATTCTTCATTTCTCTTCTTCTTTTGAGATAAAAAAAGC
TCTTTTCTCTTCTAATAAAACTCACTGCGTGATCTTTTAAAAGGCTTCAG
AGAGGAGATGACATGAAACATTCATTGACTTTTATCATTCTCCGGCAGAT
GGCTGTCTTTCTTTGAACGCCTCTTTTTCAGTTCGCAATGCTTCTTAGAA
TCTTACTGTATCATGCATTTTTGAAGACCAATCGGTGTGTTTTACGGATA
GGAAACTGTTGATTTAGATTGATCGTTGCAGCCCTTTGTTGATCGTTTGC
TTTCTGGCGACTAGTGAGACTTACCTTAGAAAAGTTTCTTTGGAGCAGCC
GTGTTAACTTTTGGTCCAATACTTGATTATTTTTCCATGTTGAAGTGACT
TCATAGCGAGTTTATGTACGTGTGTTTTCCTGTGACGGAGAGGGTTTAGA
TTTAGCTTCTGAGTTGTCTAGGTCTTGATCAACTAAGGACGACGGTAAAT
CAGCACTTTTACCGTCCTCGATTTTGTGGGTCAAAACTGCGGGTTATTCC
AAATCGCTTTAGAATTTTTACCGTCCTCAAAGTGCAAATACATAAACTCG
CTATTCATCGGTTAGACTTTCTTTACAATAAGAAATTAGAGAAGAGAAGA
CATCCATTCATACACAATGATCACGAATTTCGGGTTGAGTCCTTCCAAAG
TGATCCACCCGGTCACCTCCATGCAAAACATCATCGGGCAATGGCAAGAG
GATGACAGCGGAGAAAATAAACCCAAAATATGTATCATTTACATGTATGC
TAACAATAAGGTACTTGTCGCGATGGCTTCTTGCAAGTGCATTACAGTGG
AGCCTCTTTAACCCGAACCTCTGTAACTCTATTCTTAATTCGAACAGGTT
TTCTTGTTTTTTTTTTCAGTTAACTTACTCCATAACTCAAATTTACCTTA
TCTGAAGTAAATTTGTGTTCCCCGTATGGGTTTGAATATCTTCGACGCTT
ATTGCACCTCTAACCATTACATATTCCGGGGGTCATTGTTTGCATTGATG
GCTATACAATTTATTAGCCTGACGAAATTATTTGGTTCACAAAACACACA
AAATCAAATTGAATCATCTGTTCTTCCCTGGGTGAAATTTTCAAGATTGT
CTCTTTTATTACACTGTTTCTTAAGCCGTTCCTTGATCAAATTCCCTTTC
ATTTTCTAGCAACGCGAGCGGGAACTAGCGGAACTACATAAAGAACGAGA
GAGAAGAGAAGAGTTGGAACGACTTCTTTTACACNTTACACAAAGAGCGG
GAGAGAAGAGAAGAGTTGGAACGGCTTCTCTTACACGAACGAGCGCAAGA
AAACGTCCTCGAACGAACGCTGAATCAAGAGAAAGAAAAATTCACGACGC
TGGAACGAAGTCTTGCGGAAGAGCGTTCCAAACGAATGGAAACGGAGAAA
AGGTTTGATATTTTTTTTAATGATTCTTACTTATTCAATCTTACTATGTT
ACAGTACTGATAGCACTGGAGTAGGCGCTTAAAACACACAACCGAAATTT
TGTTTTATTCAAGTGCAAAATCATCATTCATAACAAGTTTAAAAAAGGCG
TAAGAGGGCTCACTTTGCATACACATTTTGTAACTGCCAGCCGAAATCTT
TAGCAAACTCAGTTGAAATCTGGCGTCAATAAAACTGCATGTATTGGTCA
CAGATATTGTCAAATTTTAGCCTGCTATCTGCTCGGAGACCTGTCCCAGT
CCACATCATTGTCATGTTTGAAAATTGAAAAGTAGCAGATTAAGCGTTGT
AACTAACTATCACAGTCAAGCCTTTTGTGCAGTCCGTTTTTAATAGACCT
TTTCATAAATTACGTTACGAACATCACTTGCCTCGTTTTGAAATTATTGC
CATGATGATTAACTCCCAGCAGTTTTCATTAAAACTACTTTCTATTCATA
ATAAAATCATTTTTTTCTCAAGGGACATAATAACCATGGTAATTGTTTGA
ATACCAGGGAAGTGATGTTCGTGACGTAATTTATGAAAAGGCCTATTGAA
TAACGGTTCTTTCTTTTGCTTTGTTTCAGATTACAAGAAGAAGAGACGAG
GAATCGAACGCTAGAACATAAACGCGGTGGCGGTGATACGCGAAGTAACG
GTGCAATGAGCGGTAACGGAACTCTCAAACGGCGTGTCCCTTCATACGTA
AGAAATCTTCCGATTCTTCCATGGAAGAGTTTTAGGTTTCTCAGTCATTG
TGCATTTTGCGATACTGAAACTTTGTCGAAATAGTTCATCGCTGATATTT
TTGTTGTTTCTATTGTGTCAAATCATAACAATAGGTATGAGGGTGTTCCA
GGAATTTTGGTTACCTTCTCAGTCGTTCGCTGCTTTGTTTTAAGCTATTG
ATTATCCTGGAGTTTTAATTTTATGCTCACATTTTAAAGAAAGGAAAGGG
TCTCGAAAGGATGTTTTTCTATTCCGATTATTTTCTTCTATTGCAGACAC
TATCGATCCGTTCCGGTCAATCGGGAAATTCGGAAGAAGTCAACCTCCTC
CATCACGTTGTAGCAGCGGGACACGTCATTGAAAATTGTCCGGCCGTCAA
AATCAACCGCTACTCGTGTAGAGGGTATCTCTTGAAGATGGGAAAATCAC
GGCTCAAAGTTTCCTGGAATAAAAGGTGGTTCGTGTTCGATCGGAAATTA
CGCGCGCTTTTATATTACCAAGATGAACGAAAGACAAAATCGAAAGGCAT
TTTATATTTTCAATCTATACAAGAAGTTTACGTGGACAGTAGCATTAAGA
AAAGCCCGAACTCTAAGACGACTTTTTGCGTGAGGACGCCTCAAAGGAAC
TTTTATCTTTCTGCACCTTCTCCTATTGCCATGAGCATTTGGATTGACGT
CATTTGTACCGGCAAAGAAGGTGCTTTCACTAGTATGACCTTATAAGGAG
GTTGGATATCCGTATAAGGAGTGTTCGGTTGATTATGTGTGTCCACCTTA
ACAGAGTGTGACTGGTTTGGTCGATGACCTTAAAGTGTCACCTGTTTTAC
ATCTGGTGGAATTGGATAAACCTTGGTTGACAACCCTGGGCCGAAGTCCG
TAGAAGCGCTTGCTTGGGAAACAGTTGTAAAGAACATCACTCCCAGAGAT
GATTATAAGATGGCTATTGAACAAAAGGAAATTATGCGATGTTAAATGTT
TGGAGTGATAATGTTAGAGCAACCTATGGTCGCTAACATGATAATTAGTT
AAAAGGCCGGATGCGTGTATGACTGGTTGCAATTTTGTCGTCATGTGCGA
CATATAGCTCTGTTTTAATTTAGCAATAAATTTTCTGGATCTGGAGATTC
GCAATAATTTCATCTCGCCGAAGAAATCAGCCGAAAATTTGTGTACCCGT
AAACGACAAAAAAGCATATTTACAGTTTTGAAATCTTTTGAAGAGTTTTA
TTTGCCCGAAAAGGGAAAATGCGTAATTAAATCTCGCAAAAATCAAGTAG
CATAGAATAAAACTCCAAGTTAAAAATGTGAATGATATCAAAACCAAAAG
TCTCTAAACCAAAAAGGCTGAAATTCCTTTTAGTGAAGAAATGTTAGCTA
ATACATTAAATCTTTACTTTAGATTTTTTATTTATAACTTTATTTATATT
TTGAAAATCTTGAATTTTTTACATTGCTTTCAACAATTGAAATTGTTAGT
GTAGGTAACCTGTTGCGACTTTAACCTAAGAGTGCCACTCTACGAGCTTC
TTATCGCGCCATCCAGTCTATTACAAAGCTTTAAGTGGACCCCGTCTCTA
GAATATTTAACCCATTATTCTAAGCTGACTGAAACCGTGTCGACACTATT
TTTTAGTGCAGAAAATGCATTTTTTTTAAATATCCACTCATCCTTCTTTC
TCTCATCTTTGAATTTGTTTTGTTTTTTAAGAATTCTATATAAATCAATA
TTTTTTTGTCACAGTAACGTATTTTTTGCTATGTAAACCAACCATCACAT
GTGATTTTCCTCGAAGCACTCTCTATGTGTGTGTGTGTGTTTGTAAATAG
ATCATTTTTTGTATTACCCATAAACCCATCTTTTTGCAAAATGAAAATAC
CAAAACATAAGACGAATTCTTTTGTCTTTCAGACACAGTGAAGTTTTTTT
AACTCGAAACTCGATAACTCAATATCTCCTTAACTCGAACAAGCGTTATG
TTCACTTCAG

Gene-mRNA-Prot

This transcript is a part of the following gene feature(s):


Feature Name	Unique Name	Species	Type
XLOC_003961	XLOC_003961	Clytia hemisphaerica	gene

The following exon feature(s) are a part of this transcript:

Position

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
sc0000073	supercontig	sc0000073:546825..560634 -

Expression

Values :

    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0.475538	0.289208	0.354116	0.28494	8.58696	7.20152	5.46239	4.97472	3.02962	8.61547	1.98277	3.46195	11.0193	10.2698	7.52831	6.08876	8.54975	8.38186	28.6584	26.7164	7.32874	6.12909	4.49438	5.3989	8.11908	10.8927	34.9787	35.3398	70.3073	63.2563

Blast

[Close]

BLAST of TCONS_00007083 vs. Swiss-Prot (Human)
Match: PHLB2 (Pleckstrin homology-like domain family B member 2 OS=Homo sapiens GN=PHLDB2 PE=1 SV=2)

HSP 1 Score: 153.295 bits (386), Expect = 2.926e-37
Identity = 92/226 (40.71%), Postives = 125/226 (55.31%), Query Frame = 3

Query: 2238 LERTLNQEKEKFTTLERSLAEERSKRMETEKRLQEEETRNRTLEHKRGGGDTRSNGAMSGNGTLKRRVPSYTLSIRSGQSGNS-----------EEVNLLHHVVAAGHVIENCPAVKINRYSCRGYLLKMGKSRLKVSWNKRWFVFDRKLRALLYYQDERKTKSKGILYFQSIQEVYVDS--SIKKSPNSKTTFCVRTPQRNFYLSAPSPIAMSIWIDVICTGKEG 2876
            +ER L Q   + T L     E R + ME +KR  EEE R R +  KR   +T          + ++++    + IR  Q   +           E+ +L  HV  AGH I+ C  V I   +CRG+L+KMG  ++K +W KRWFVFDR  R   YY D+ +TK KG++YFQ+I+EVY D   +  KSPN   TF V+T  R +Y+ APSP AM IW+DVI TG EG
Sbjct: 1038 MERLLKQAHAEKTRL----LESREREMEAKKRALEEEKRRREILEKRLQEET----------SQRQKLIEKEVKIRERQRAQARPLTRYLPVRKEDFDLRSHVETAGHNIDTCYHVSITEKTCRGFLIKMG-GKIK-TWKKRWFVFDRNKRTFSYYADKHETKLKGVIYFQAIEEVYYDHLKNANKSPNPLLTFSVKTHDRIYYMVAPSPEAMRIWMDVIVTGAEG 1247

The following BLAST results are available for this feature:

BLAST of TCONS_00007083 vs. Swiss-Prot (Human)

BLAST of TCONS_00007083 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 1


Match Name	E-value	Identity	Description
PHLB2	2.926e-37	40.71	Pleckstrin homology-like domain family B member 2 ...	[more]

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TCONS_00007083 (transcript) - C. hemisphaerica