TCONS_00007080 (transcript) - C. hemisphaerica

Overview
NameTCONS_00007080
Unique NameTCONS_00007080
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length2426

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00007080 ID=TCONS_00007080|Name=TCONS_00007080|organism=Clytia hemisphaerica|type=transcript|length=2426bp
GGGGGCTTGGATcgactcaaaattcactttcgatttctgaGTTCTAGGAA
CAAAAAATCGATAACGCAATGGGTTTGAATATCTGAACCTGGTTTCTTTC
TTCATAAAAGGAAAAGGAATTAAAACTAGGGAAATCGCGATAGGATGTCG
AAACCACTCATAAGAAAATGCACCAATGAACACAAACCACGAGAAATTTT
CAAAGCCGAAAAAGCTTGCATCTACTtgctgtgatttgattggctctttc
atgaTGTAAACAAGTGGAAGGGACAAAAGCTATACTTCAAAACATCACTT
CCAAACTTTGGCCTGGGCCAGCAGCAAAAACTGAAGAAAACTTCATGTTT
TCTTGAAAATCAAAGCTAACATTATTAATTTCTTACAAGATGTGGACAGA
AACGTCTTGGCTTTACAGGGTATTTTCCTCCCTTTCAGTTTTATTGATGA
CACTGGACTTCAACTTTAACTTTATTGAAGGAAATGCATCAGCAGATGTT
GACCATCATTTAGAGATGGGAAAAAGGTTGTTAGCAGCTGGACAATTAAC
AGAAGCTCTTTCACATTATCACTCTGCAATAGAGGGTGACCCTGAAAACT
ACATGACTTATTTCAAGCGAGCAACTGTATTGTTAGCCCTTGGCAGATCC
AAAACAGCACTCAAAGATCTCACCAAAGTTGTGGAATTGAGACATGATTT
TATTAGGGCACGAGTTCAAAGGGCCAACATATATTTGAAGCAAGGAAATC
TCGATGAAGCTGTTGTAGATTATGAATATGTTATTGAAAATTCACCAGAT
GATAACGAGTCCGTTGAAAAGAAAGAGCTGGTGGAGCAGCTTAGGATGGA
TGTAGCAAGTGCACAAGAATATTTTGATGAACATCGTTATCAAGAAACAA
TTGATCTTTTACAAAGACCACTAGAGCATAGTCCATGGAGTGTTTCTTTA
AGAGAAATGAGGGCTGAGTGCTTTCAACACACTGGCCAGTATTTCAAAGC
TATTCAAGATTTAAAACCAACAACAAAATTAGTGAATGACAACACAGAAG
CATATTTGAAAGTGAGCCATTTATATTACGCCCTTGGTGAATCAGAAGAA
TCATTGAAGGAAATCAGAGAATGCCTAAAGCTTGATCAAGATCACAAAGC
ATGTCATAAACATTATAAGAAAGTGAAGAAACTGGTCAAACTATTCACAG
ACGCACAAAAATACATGGATCGTGAACAaTTCAGTGATGCTATATTCAAA
CTGAATGCAGCACTCAAGCATGAAAAGGAAAACATAAGATTTATTGCAAa
tgcaaaagaaaaattatgtACTTCACAATATAAACTTGGTGATAGCAAAG
AAGCCATTAAAGCTTGTACAGAGGCAATAGAACTTTCACCACAAAGCGCA
CATGTGTATTGTGACCGTGCTGAAGCATATTTACTAGAAGATAATTTTGA
CGAGGctttgaaagattttcaagaAGCAAAAACTATAAACAATGACCATC
AACGGGCTAAAGAAGGTATTGACAGAGTAAACAAACTGATAAAACAATCC
AAAAAGAGAGATTATTATAAAATATTAGGAGTTAAAAGGAATGCAGCTAA
ACCAGAAATCTTGAAGAAATTTCGTAAGTTAGCAGCAAAATGGCATCCTG
ATAAATTTCctgaagatgaagaaaagaagaaagcaGAAAAGAAATTCATT
GATATAGCAGCAGCAAAAGAAGTTTTAACAGATCCAGaAAAACGACAAAA
ATATGATATGGGTGAGGATCCTTTAGATCCCGAATCTCAACAAGGCCAAG
GTTTCAACCCATTCCAGCAAGgttttggtggttttggtgatgGCTTTGGA
GACTTCAAGTTTCATTTTAATTAGGttttttgttgttattttctatgtta
tttaaaaatagtttaaaatagTCCTCCTTTAGGCATAGGCAAGAGGTTCT
TAAAGTTTGTGAACAACATAAGCTTTCAAAGAagactaaaatattttttt
ttatgacttgaattTATTAACTACTCTACCCAAACCTCTTGACTATGCGA
AATGGTTGTCTTTTTAGCCTTTCACGCAAACTTTTATATCCttgattatt
ttgaaagacTTGGATTTTTAGAACAAAATTTGTTGTGTTTTTTAACTTTG
CTTTTTCTTTGCGTTTTCTATTTCTAGTGAAGGTTTATAACAATGTGTCA
ACTTCATACTTTTCACAATTTCTGATCCCTTTTAATCACTCTTaactgtt
ttattttttatttcttaaaattattTACTTCTGTGCCGTTTCCTcatcaa
tgttttttaaaagataataTTTGTACCAAGTCTCTAGGCTATGAAataca
aaaacaagcaaaacagaaatatcagtccaatttctttctttttgaaacaT
ATCTTGTTTAAGAATTCTTTTAATAC
Run BLAST on NCBI

transcript from alignment at sc0000073:473799..486299-

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00007080 ID=TCONS_00007080|Name=TCONS_00007080|organism=Clytia hemisphaerica|type=transcript|length=12501bp|location=Sequence derived from alignment at sc0000073:473799..486299- (Clytia hemisphaerica)
GGGGGCTTGGATCGACTCAAAATTCACTTTCGATTTCTGAGTTCTAGGAA
CAAAAAATCGATAACGCAATGGGTTTGAATATCTGAACCTGGTTTCTTTC
TTCATAAAAGGAAAAGGAATTAAAACTAGGGAAATCGCGATAGGATGTCG
AAACCACTCATAAGAAAATGCACCAATGAACACAAACCACGAGAAATTTT
CAAAGCCGAAAAAGCTTGCATCTACTTGCTGTGATTTGATTGGCTCTTTC
ATGATGTAAACAAGTGGAAGGGACAAAAGCTATACTTCAAAACATCACTT
CCAAACTTTGGCCTGGGCCAGCAGCAAAAACTGAAGAAAACTTCATGTTT
TCTTGAAAATCAAAGCTAACATTATTAATTTCTTACAAGATGTGGACAGA
AACGTCTTGGCTTTACAGGGTATTTTCCTCCCTTTCAGTTTTATTGATGA
CACTGGACTTCAACTTTAACTGTAAGTATATGACGTCTATAGGTTTTATA
CATACTTTTTCTTTTCCGCCTCTCTTGGTGTTGACCGAATCGATACACAC
AGATAATTTGCATTTCTTTCTAGAATAAAAGTATTTGCAGGGGTACCATG
AAGATGGGTAACTTTTATCAGCAGAGGCTAACATGCATAGCCCTCGAATG
AAGGACCTGGCTGGTCCTTAAAATACAAAGTTAAATCAAAACAAAAATGG
TAGATTAGATAGAAGAGCTGCAAGCAGAGCTGCATAGTTCATTTGTTTTG
AAATTTTACTGCTTTGATTGCTCAGTCATTTGATTTTTTTTCAACTGATG
TTTCAACCAAATATTTGGACTTTAGTCTATGGTGGTAGCTTGTACAGTCA
GGGAAATCCCCTCGATTGCGGTAGTAAATTTTTACTGCAATTGCAGTATA
AACGTTACTTTTACAATTTTCATATACCGCAATTGCAGTATATTCAAGAA
TCAGCATTCAAGATTCAAGGACAAAACAGGCAATTTTTGTTCATAATTGA
TCATATCTTTTTAACGCACAGACAAAATATTTTTTCCGTAGATCAGATTA
TTTTAATAAGGAAAAGCTTTCTTCTCATACAATTTTTTATAGTCGATGTT
TGTTTATCTTTGTCTACCAGCACTATATTTAGTCGTTATAAGCCTTTGAA
GGCTAAACACAAATGAAAACTACCGCAATTGCAGTATACCCTAATTGAGG
GATTTCCCTGACTGTTGTATAGAACTCAGAAAGAGTTTGAAGACTTTAAG
AAACACTCTGCTAAACTTTCAAGGGTGTTTTTGCAAATTTTTGGATGCTT
TGAAATGGATCTTTTTGCTTTTCATCCACCATCTATCTTGCTTGGATTAT
ACTGTATATGCAGATACAATGGTGTGGCAAATTTGTTGTGGCCAGATTTC
ATACATAAAAAAGTATGCAAAACCTATGTAAAAACATTTCTTTCTAGCGA
AAGGTCTATTTTGAAGGGGCTGGTTCTGAAAGAAGAGAGAATATGATTTT
TTCTGGTTTTCAAGAGAAGCAAAATTCTTCTACAAGATAACACTTTAATA
TAATACCAACTATACAACTTTTATATTAATACTAGTAAGTTGGTCTAATA
TCGACATCCCCCGTCTAATTCTGACACCCTTCTTTAGGCGGCAATCAGAA
ATATCTTCGTTTCACGTCGCCCGACCGACTCACAAAAATTGAGTAGAATT
GAGTCGTTGAGTCGGTAAATTTGTCGGACTTTTTCTCAGACTTTTTCTGT
CAATGACCTTTCCTTTGTTCAAAAATTTTATTATTGCCGATTTTTTGCGA
GCGATTTCAAGCGTCGCAGCATTTTGACTTTGTTTATCATTACATGCGCC
ATTTTGGGGTTGGACGTCACAGTGTTCAAAGAATGCACTCCAAAAATGGT
TGGAAAAATGGAAACCCGAAAATTTTCGAATTTTCCAAGATGGCAGATGG
AAAAGGGAAAACGTCTATCTGTTTTGTAAGGAAAATTCTTTTGACTTGGT
CATGCCAATTGGTAGAGTTTTGGTCCGAACCATAATTTTGGTTGGGTCAA
TTCAATCTCTGTAAGGGTCACCTTAGAGAAAAAGAGTCTCTGTCTTGAAA
AAAGTGTGCTAAGTGTGGTAAAGTAGTTCTAATAATATTGCTTTATTATT
TTTCAGTTATTGAAGGAAATGCATCAGCAGATGTTGACCATCATTTAGAG
ATGGGAAAAAGGTTGTTAGCAGCTGGACAATTAACAGAAGCTCTTTCACA
TTATCACTCTGCAATAGGTAAGTTTAAAGGGATATACTATGATCACAAAC
TTTCTTACAAAATCCAATAATTTTGTTTTCTAATTTTTTTAAGTTAATAA
ATTACAATTATGTATTGTGTTATATGACTGCATGTAACATATCAAAATCA
TTTGATTTAGAGGGTGACCCTGAAAACTACATGACTTATTTCAAGCGAGC
AACTGTATTGTTAGCCCTTGGCAGATCCAAAACAGCACTCAAAGATCTCA
CCAAAGTTGTGGAATTGAGACATGATTTTATTAGGGTAAGATTACTTTCT
GTTAAAATATATGTTTATTTGTTTATTGTTTACATATACATTAACATTAT
CTGACACCATACTGTGCAGGGGAGGTTCAAGGTCCCACCACTTGAGAAAC
TGCCACCTCATAATTGACTTGAAATATTTATTTAAAAAACGCTCTATTCG
TATCATAGACCTTTTNCAGTGTTCAAAGAATGCACTCCAAAAATGGTTGG
AAAAATGGAAACCCGAAAATTTTCGAATTTTCCAAGATGGCAGATGGAAA
AGGGAAAACGTCTATCTGTTTTGTAAGGAAAATTCTTTTGACTTGGTCAT
GCCAATTGGTAGAGTTTTGGTCCGAACCATAATTTTGGTTGGGTCAATTC
AATCTCTGTAAGGGTCACCTTAGAGAAAAAGAGTCTCTGTCTTGAAAAAA
GTGTGCTAAGTGTGGTAAAGTAGTTCTAATAATATTGCTTTATTATTTTT
CAGTTATTGAAGGAAATGCATCAGCAGATGTTGACCATCATTTAGAGATG
GGAAAAAGGTTGTTAGCAGCTGGACAATTAACAGAAGCTCTTTCACATTA
TCACTCTGCAATAGGTAAGTTTAAAGGGATATACTATGATCACAAACTTT
CTTACAAAATCCAATAATTTTGTTTTCTAATTTTTTTAAGTTAATAAATT
ACAATTATGTATTGTGTTATATGACTGCATGTAACATATCAAAATCATTT
GATTTAGAGGGTGACCCTGAAAACTACATGACTTATTTCAAGCGAGCAAC
TGTATTGTTAGCCCTTGGCAGATCCAAAACAGCACTCAAAGATCTCACCA
AAGTTGTGGAATTGAGACATGATTTTATTAGGGTAAGATTACTTTCTGTT
AAAATATATGTTTATTTGTTTATTGTTTACATATACATTATCTGACACCA
TACTGTGCAGGGGAGGTTCAAGGTCCCACCACTTGAGAAATTGCCACCTC
ATAATTGACTTGAAATATTTATTTAAAAAACGCTCTATTCGTATCATAGA
CCTTTCCTTCTCTCATTTCAATTTCTTCTCGGGTAGGGCTAGAAACAGTA
AACTATCGATTATATAAGTTTTTTTGATTCAGAGTTGGTATCTGATTCTT
AATATTTTATTAACTAAGGCCTGTATGTATATTCCACTTGAACAACAGGC
TAAAACGAACTCAAAACCAAAATAAAAATGTAAAAAATATCCAAAATAAA
AATTTACAAATACAACAACAGAAACTTTTTTTGGTTTGTTTTCTCAGATT
AAAAATACACTCTTCTCGAGATGCATATATTTATTGTTGTCCTCGTTTTC
AAACAGATTTTATTGCTATAAAATTACATATTCACAATGATAATTGTGTT
GTTTACACCTCATGAGACATTTTGAATTTCAAGTACTTTTATTTTAGAGT
TAATGTTTGCCTTTTGGGAATTTACATTGGTTAAAATGTATAATTTCATA
GCAATGAAATTTGTTTGAAAACGAGGACAACAATAAATTTATGCATCTCG
AGAAGAGTGTATTAATGAGGGGAAAATTAAATAGGTTTACTTAGTGAAAG
TGAAAATAAAACAGTGTCAGGAATAAACCTTTTGCTAGTTACAATGTTGT
GTTGAATAATTAAAAACTCCTGCACCCAAAACAATGATAAGTAAAATTCA
AAGCACAATTTTAATGATTATGCATCAATGTGTCGTTGTTTCANNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNCACAATGATCAAAGATTTACA
GGCAAGATATCAGGAATACATCAAGGATAAAAATCAAGTTACCAATCTAA
TACAGAGCCAGTTTTCCACGCTAGAAACAAAATTAACATCCAAGATAGAA
GAGACGTTGAATAACAAGACTGCAAAAATTCAAACCGCAACAGAACCACG
TAAGAAAAGTTTTGCTGAAGCGACTAAAAACAACGATCAATTAAGTGTAA
ATAGCATGAAACAGCTACTACGAGAGGAAAAAATCGACGAACAAATTGAG
GACCAAAGGAAACTATCGACAGACGCAAATATCATTATCCATGGGGTAAN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNT
GAATTGAAACAACACGAGAAGTACGTGAAATTAAGTATCACCGACGACTT
GACAAAAATGGAGAGGGAACAAATCAAAGAGTGGAAAAAGAGAGCAGACA
AGATGAATAAAGCCAGATCGAATGACGATTTTAAATGGAGGGTACGAGGA
AGCCCTCGTGAAAAGTTATATTTTAAAAAGATTTTTGGACAAGAACGGTT
TAGAGGCCCTTGTGCCTCAACTGTAATCACCTTACAAATTGTAAAGTAGC
GTTGACTTTTATTAGCCTTTGTTGCTACCTGTTCGTCAACTTGAAATAAA
CTATTACATACATACATACATACATTTCAGATTGTTTTAGTGTTGGATTT
TTTTACTTATTCAACATAACTAGGAAAAGGTCTATATAAATTGTGCACCT
TTTGAAGCACAACGTTATTGCAGTCAAAAAAAAAAAAAATTGCTCAATAA
AGAATTGGAGATTGTTCAAAGAATTTTAAAATTACATAGTTTGGGGAAAA
TTGCTGCTTTGTAAAATTTGCAGAAGTCCCACCTGAACTTCTCTAGTCCC
ACTTAAGCCTAATTCCCTCACCTCAAAGCTCAGAATTCACAATTCCTCTC
AATTTAGGCTAAAAAATCCAGGGGGGTTGCACACTATGGGCACTATGAGT
AAGTGACCATGTTAATGATACACAAAATTTATTTTCAAATGACATTAAGA
TAGGATGCAGCATCTTTGTGTCAAACGTCTGTTAAATGTGTATGAAACCC
ACATTATTTTTGGGGCACAGATTTATATAGAAGTGTTGTCAAATATCTTG
GCTAAAAATATTGTAAGCAACTTCCTTTCCCAGCGCTTCCAGGAATAAAT
TAAGTGATCATTTTTTAAAAGGTTTATGATGTCTGTTGTTGATACTTCTA
ACTTTTTTATGATCTTCAAAATTTGTGTTTTGTAACCCATACAGTCACAC
TTCATTGAACTTTCTTATATTTAGGCACGAGTTCAAAGGGCCAACATATA
TTTGAAGCAAGGAAATCTCGATGAAGCTGTTGTAGATTATGAATATGTTG
TAAGAAGCATTGTTTTTCTAAGTTCAGGTCTTGGTTGGGAATAATTGCCT
AAATTTGCGTTCAATATTAGGTCTGCTCTATATTCTGTCCTGCACAATAC
AGCCTTCGGTATTGTTGAACCCTATTAGTTTTTTCTTGTGGCCTTAATTC
AAATCCGCTTCCAGACAAATTTAATTCAAGTCTCACTTAATTTTGCTAGT
TTGTTTTTTATTATGTCAAAAGTCACGCCTTAAAGCAGGATATGCGTAAG
GGTCTCTGCTTAATTTTTGAATAACAGCTTTTTCAATTTACTGTCTCAGA
TTGAAAATTCACCAGATGATAACGAGTCCGTTGAAAAGGTTTGTCTTGGT
TTCCTGAATAGAAATGACCTATTGCTTTTTGTATGTGTAAACCCAGCAGA
ATCATGACATCTAATAAAATATAGAGGTTGATATAGATTTTATTTATTAG
TGATTTAATTCTGAAATCATATCCAAATTCTTTTCATCTTCTAAAACACA
GAATCACAGCAAATTCATCACCATAATATTAACAACCTGAAATTACTCCT
TTTAAATTATGCCTTGCATTTCAGAAAGAGCTGGTGGAGCAGCTTAGGAT
GGATGTAGCAAGTGCACAAGAATATTTTGATGAACATCGTTATCAAGAAA
CAATTGATCTTTTACAAAGACCACTAGAGGTTTGAACTATTATAAAGCAT
GTTAATCTTACCTTACTTTAATGTAATGTGAAATATCAATGCTGAAAGAA
TTTCAGAATCGATGAATGTTGCAGTCTGACAAATGTTGGTTATATATTAT
ACCGAGTGTGCCAGAAATGAGTTACTCTTTGACTTGATATTGCAGTCAGT
AGCAGAAAGATTTTTCAAAGATTGGTTCGGAATCATTTAGAGGAAAGCCT
AACTTAAAATTTGGTGTATTACTTTTTAATTTTACTTCATTGGTTCAAAA
GTTATGTTAAAAAACCTGAAATGGCAATTTTAAAAGATGTAAAAAAAAGG
CAAAAAATTTTCTACTGTCTACAATATCAAATCAAAGAGGGTAGCTTATT
ATGGCACACTCGGTACAATGGAATAATTTATGTCTTTTAATAAAAAAAAG
ACCACACTTAAATCAGAAAGTTCTAAGTAAATGATATTAATCTCAAAGAT
GCCCCAGTCTGTCCTTTTTCCTTAAGATAATTATTAATGACTTTCTATTG
AGAAACTTTTCTGCCCACTTTCAATAAAATCTTTGTTATAATTTTAAATT
ATGTTTTCTATTTCAGCATAGTCCATGGAGTGTTTCTTTAAGAGAAATGA
GGGCTGAGTGCTTTCAACACACTGGCCAGTATTTCAAAGCTATTCAAGAT
TTAAAGTAAGTCTTCATGTTGTAAAGTAAAAAGCACTTAAATATTCCTTC
CTTCCTTCAATGTTGTAGAATTAACGTGTTATAGTTGAAAGCTTGAATGT
CTTTCTTTTTAATGATTTTCTTTTATTGATTTGAGTATGTCTTTAGTAAT
TCATAACATAATAAGGTCAGCAAACGGAATTGGTTTTCTTTGACAGCAAT
AAAATATACCTAATGTGACAGAAATTTAAAAAGTTCTATCGTGGTATACT
AATATCTCATCTCATGGCCCCCGGCGTGCGCATCGAATTGAGGGGGCCAA
AAAAATATGTTGCCCACCATGGTTGGGCGACGAAGAAAATTTTCGACTTT
TTGCCCTTGTTTNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNGGGGGGGGGGGCCTGGCCCCCCTGG
CCCCCCCGGTGACGGGGGCCATGCATCTTATTCATAATATTGCATGGATA
TTTTATAGACCAACAACAAAATTAGTGAATGACAACACAGAAGCATATTT
GAAAGTGAGCCATTTATATTACGCCCTTGGTGAATCAGAAGAATCATTGA
AGTAAGTTTCTGTGTAATCATAATTTTATTTACTCTGAGAGAAACATATT
CTCATATTCATGAAAAAAAAACTCTCCAAGTAATTCTTTCGTCCCTTTTT
AACAACAATTGTAATTGAATTGTAATTCAATTAAATAGGTTAATAAAAAT
CAGCAATGCTTAGAATTTCTATAACCCTTTTCATTGTTTTTTATTCTTTT
ATTAGGGAAATCAGAGAATGCCTAAAGCTTGATCAAGATCACAAAGCATG
TCATAAACATTATAAGGTAGTTATTTTCAACTTGCACAGCTATCTTATTC
TTTTGTTTTGTTGCACTTCCATCCACAGTTACAAGCTAGTAACTGAGTTA
AAATGTCTCCAAACATGCAGAGTGTGCAGAGGGGTCTAAACCCTCCCATT
TTTATTTCATCTCCCCTATATGTGAATCCCCTCAATTAAAAAAAATTTTC
TAAACCGTTCTACCAGTCATTCAGAACCAAAAACATTGAACTAAAAGTTA
TATGAAAAAAGAGTTTAACATGGTGCAGCAGGCAAAAATTTAGCTATCTA
CACTTGTTTTTAGTTGACCCACACCAAATATCTTAATCAATATTAATATG
ATAGATATTTTGACCAAAAGTTGTTATCCCCCTATTTTTACTTTCCCCCC
CCCCCCCCCCCTAAAATCTTAAACCCCCCATTTCTTTCGGGAAATCTCCT
ATCCGGGGGATAAAGCATTTTTGGAAAAGTTGGATCCCCCCTTAAAAAGG
GGGGGGGATTCACACTATGACATGACATTACTACTGTGGATTTGTTTTGT
TCAGATGAATACTATTCTGAAATTTTTATGACCCTTTATTGCAGAAAGTG
AAGAAACTGGTCAAACTATTCACAGACGCACAAAAATACATGGATCGTGA
ACAGTAAGTCATCACTAATAAACTTTAATAGATAATTCTTTTAGGGTTAG
AAGCCTCATGTTTCATGCAATGTAGTACGTTATCAAGCGCTGATTTTTAA
TCTTAATCCTTGATTATTAATTGTGATCTACATTGAACTATTCAATCATG
GTGGTAAAATTGAAATATTTGTTTTTATTCAGTCTTACAACTTTGACCTG
GCCTCTTTTGCTCTGGTTTGAGAGCTCACTTTTTTACCTGCTTTTTATGC
AGTATTTCACTTTTATCCTTTAATTTTTTTCAACAGATTCAGTGATGCTA
TATTCAAACTGAATGCAGCACTCAAGCATGAAAAGGAAAACATAAGATTT
ATTGCAAATGCAAAAGAAAAATTATGTACTTCACAATATAAAGTAAGAAA
TTCATCTTCAAGATTTTAATACTAAGAAGTAGTAAGGTTACTAAGTACTG
TTTCTATACTTAGATAAAATTTTGCATTTCTTTTGCGTAAGAATTTCAAT
AATTTTCAACATTGGGCTTTTCCAGAAAAAATTCGTTCATGGGGGGTGGA
GGATATATTATTTTTTCTGTGATCTACTAATGGACATTTCGATTTTTCAC
CCCCTGGACACGTGTTTTACCCCTGGACAAGCATCGAGTTGACCCCCTGG
ACACAAATATTTACCCCTGGACATCGCAGATTTACCCCATGGACATGGCA
GTTTTTCAGGGTTTTTTCAATACCCCTGGACAATATATCCTCCACCCCCC
ATGAATGGTTTTTTTCTGGAAGAGCCCATTACATTATCATTAAATATTCT
CTAATTGATTATCTAGTCTTTAACCTTACTGCAACTTACTGCTTTCAACC
CCTTCATTTCAAAGAACCCTTGAGCTTTGTCTCTGGTTTTTCATTGATTT
TCCAGTTTTAGCCAAATACTAACAGTAAAATTAAAATTCAATCACTCACT
TTCTTTTAGCTTGGTGATAGCAAAGAAGCCATTAAAGCTTGTACAGAGGC
AATAGAACTTTCACCACAAAGCGCACATGTGTATTGTGACCGTGCTGAAG
CATATTTACTAGAAGATAATTTTGACGAGGGTATGTTTATCTTGTTTATT
CAAGTCTTACATGTAAACAAGAGTTTTGCTTTACTAAATACATAGAAGCT
AATTTCTAAGCTAATTTCTGATTATTTTATAACATATTTTTTCATTATAG
CTTTGAAAGATTTTCAAGAAGCAAAAACTATAAACAATGACCATCAACGG
GTATTTCTTTAAATTTATTTCATTTCATTATTGTCATACAAAATACTCTT
CTTTTCTGTTCATATTCATCACTATGAAAGAAGCTAAATCTTTTTTAGCC
AAACTTAACTTTTGTTTGTCTATCTTTTCAGGCTAAAGAAGGTATTGACA
GAGTAAACAAACTGATAAAACAATCCAAAAAGAGAGATTATTATAAAATA
TTAGGAGTTAAAAGGTATGCTTTATTAATTTATTAAGGTATTTTTATATT
TTAGACTAATGGGCTCACGAGAATAGCATTTTTTCATTTTTTCTTTCTTT
TGTTTCAATTTTTTATTATAATTTTACAACTTTTTACGACCTATGACTTG
TAAAAAACTGAGATTTTTTTCAACAAAATTTTGTATGCAGCTGATGATCT
TCTGGACTTTTTTGTTGTTGATAATCAATTTCACCTTATTTGATATCTTA
TATCTGGTCCTAGTGATTCAAAAGTGAACTTTGTTTTGCATGGTGGTGTA
AACTTCATACATTCTATTTGTTTGGAGGGTTGCATGTTTTTGGGCTACAA
ACGTTTTTAAATTGATGCTCTAAACAAGGAGAGCCGTGAAATTTGTTTTC
ATACTTCCCTTGATGTCTGTGTTTTGTTTTTACAGGAATGCAGCTAAACC
AGAAATCTTGAAGAAATTTCGTAAGTTAGCAGCAAAATGGCATCCTGATA
AATTTCCTGAAGATGAAGAAAAGAAGAAAGCAGAAAAGAAATTCATTGAT
ATAGCAGCAGCAAAAGAAGTTTTAACAGATCCAGGTACTTTTAATAGATC
TTATCAGAGTTTTTGATTTTTCTAAAAAAGCGATGCATTGTGGGATTGTT
TCGGGAGTATTACAATAGAAATCTCTTAGGAATTCCTCGAGGGAATTATA
TTGTAATGCTCCCGAAACAATCTTACAATGCATCGCTTTTTTAGAAAAAT
AAAAAACTCTAAGATCTTTTCTTTTATCCCATTTATTTTACCCTGCCATT
GGTTTTTACAGACTTTAAAGTAATGCATGATTTATGATTCACAGTCTAGA
AGACTATAAATTTAAATATGAATTTCATTTGAAATGAAGCATGTAGAATT
TTGATTTTTTGGTTGGTTTTATTTTTGAAAAGAATTCATTTCTAGCTCTT
TGCACATAGTGCGGAAAAGGGTCTGATCCCCCCCTTCTTGGCATCCCCCA
ACCTTTAAAAATGCCTATCCCCCAAGGATTTTGGGCTAAATTTTTTATGG
TAAAAAGGGAAGGGAAATAGTAAAGAAAAATTAAGTCTGGCAAATATAAT
ACCACTTTTTAGTGAAAATAAAGAACTTCCTTTCATGCAGACCAAATTTC
ATAACAGTGCTGGAAAATAATCTACAATATTTGTAAGCCCCCCCCTTCTT
AAACGATCCCCCCTCCTTGCTATCCCCCCCTTTTTAATGAAAATTTCTGA
TCCCCCTCCCCTTCTTCACTTTTTTGAAGATGTCATCCCTCCCCCTTAAG
AAAGGGGGCGGGGGGGTCCGAACTATGTTAGCATGAACTTTATGTCAATC
AAATATGACAAAGTTTGTAAAGTTGAGTTCAAATATTGAATGAAGAATTT
TTTGCATTTTAGAAAAACGACAAAAATATGATATGGGTGAGGATCCTTTA
GATCCCGAATCTCAACAAGGCCAAGGTTTCAACCCATTCCAGCAAGGTTT
TGGTGGTTTTGGTGATGGCTTTGGAGACTTCAAGTTTCATTTTAATTAGG
TTTTTTGTTGTTATTTTCTATGTTATTTAAAAATAGTTTAAAATAGTCCT
CCTTTAGGCATAGGCAAGAGGTTCTTAAAGTTTGTGAACAACATAAGCTT
TCAAAGAAGACTAAAATATTTTTTTTTATGACTTGAATTTATTAACTACT
CTACCCAAACCTCTTGACTATGCGAAATGGTTGTCTTTTTAGCCTTTCAC
GCAAACTTTTATATCCTTGATTATTTTGAAAGACTTGGATTTTTAGAACA
AAATTTGTTGTGTTTTTTAACTTTGCTTTTTCTTTGCGTTTTCTATTTCT
AGTGAAGGTTTATAACAATGTGTCAACTTCATACTTTTCACAATTTCTGA
TCCCTTTTAATCACTCTTAACTGTTTTATTTTTTATTTCTTAAAATTATT
TACTTCTGTGCCGTTTCCTCATCAATGTTTTTTAAAAGATAATATTTGTA
CCAAGTCTCTAGGCTATGAAATACAAAAACAAGCAAAACAGAAATATCAG
TCCAATTTCTTTCTTTTTGAAACATATCTTGTTTAAGAATTCTTTTAATA
C
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_003960XLOC_003960Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00007080-exon-sc0000073-1575043694:485829..486299TCONS_00007080-exon-sc0000073-1575043694:485829..486299Clytia hemisphaericaexon
TCONS_00007080-exon-sc0000073-1575043694:484033..484143TCONS_00007080-exon-sc0000073-1575043694:484033..484143Clytia hemisphaericaexon
TCONS_00007080-exon-sc0000073-1575043694:482918..483042TCONS_00007080-exon-sc0000073-1575043694:482918..483042Clytia hemisphaericaexon
TCONS_00007080-exon-sc0000073-1575043694:480301..480375TCONS_00007080-exon-sc0000073-1575043694:480301..480375Clytia hemisphaericaexon
TCONS_00007080-exon-sc0000073-1575043694:479962..480000TCONS_00007080-exon-sc0000073-1575043694:479962..480000Clytia hemisphaericaexon
TCONS_00007080-exon-sc0000073-1575043694:479621..479725TCONS_00007080-exon-sc0000073-1575043694:479621..479725Clytia hemisphaericaexon
TCONS_00007080-exon-sc0000073-1575043694:478945..479033TCONS_00007080-exon-sc0000073-1575043694:478945..479033Clytia hemisphaericaexon
TCONS_00007080-exon-sc0000073-1575043694:478249..478341TCONS_00007080-exon-sc0000073-1575043694:478249..478341Clytia hemisphaericaexon
TCONS_00007080-exon-sc0000073-1575043694:477984..478044TCONS_00007080-exon-sc0000073-1575043694:477984..478044Clytia hemisphaericaexon
TCONS_00007080-exon-sc0000073-1575043694:477347..477405TCONS_00007080-exon-sc0000073-1575043694:477347..477405Clytia hemisphaericaexon
TCONS_00007080-exon-sc0000073-1575043694:476958..477063TCONS_00007080-exon-sc0000073-1575043694:476958..477063Clytia hemisphaericaexon
TCONS_00007080-exon-sc0000073-1575043694:476270..476390TCONS_00007080-exon-sc0000073-1575043694:476270..476390Clytia hemisphaericaexon
TCONS_00007080-exon-sc0000073-1575043694:476100..476149TCONS_00007080-exon-sc0000073-1575043694:476100..476149Clytia hemisphaericaexon
TCONS_00007080-exon-sc0000073-1575043694:475886..475968TCONS_00007080-exon-sc0000073-1575043694:475886..475968Clytia hemisphaericaexon
TCONS_00007080-exon-sc0000073-1575043694:475316..475464TCONS_00007080-exon-sc0000073-1575043694:475316..475464Clytia hemisphaericaexon
TCONS_00007080-exon-sc0000073-1575043694:473799..474487TCONS_00007080-exon-sc0000073-1575043694:473799..474487Clytia hemisphaericaexon
TCONS_00007080-exon-sc0000073-1510915933:485829..486299TCONS_00007080-exon-sc0000073-1510915933:485829..486299Clytia hemisphaericaexon
TCONS_00007080-exon-sc0000073-1510915933:484033..484143TCONS_00007080-exon-sc0000073-1510915933:484033..484143Clytia hemisphaericaexon
TCONS_00007080-exon-sc0000073-1510915933:482918..483042TCONS_00007080-exon-sc0000073-1510915933:482918..483042Clytia hemisphaericaexon
TCONS_00007080-exon-sc0000073-1510915933:480301..480375TCONS_00007080-exon-sc0000073-1510915933:480301..480375Clytia hemisphaericaexon
TCONS_00007080-exon-sc0000073-1510915933:479962..480000TCONS_00007080-exon-sc0000073-1510915933:479962..480000Clytia hemisphaericaexon
TCONS_00007080-exon-sc0000073-1510915933:479621..479725TCONS_00007080-exon-sc0000073-1510915933:479621..479725Clytia hemisphaericaexon
TCONS_00007080-exon-sc0000073-1510915933:478945..479033TCONS_00007080-exon-sc0000073-1510915933:478945..479033Clytia hemisphaericaexon
TCONS_00007080-exon-sc0000073-1510915933:478249..478341TCONS_00007080-exon-sc0000073-1510915933:478249..478341Clytia hemisphaericaexon
TCONS_00007080-exon-sc0000073-1510915933:477984..478044TCONS_00007080-exon-sc0000073-1510915933:477984..478044Clytia hemisphaericaexon
TCONS_00007080-exon-sc0000073-1510915933:477347..477405TCONS_00007080-exon-sc0000073-1510915933:477347..477405Clytia hemisphaericaexon
TCONS_00007080-exon-sc0000073-1510915933:476958..477063TCONS_00007080-exon-sc0000073-1510915933:476958..477063Clytia hemisphaericaexon
TCONS_00007080-exon-sc0000073-1510915933:476270..476390TCONS_00007080-exon-sc0000073-1510915933:476270..476390Clytia hemisphaericaexon
TCONS_00007080-exon-sc0000073-1510915933:476100..476149TCONS_00007080-exon-sc0000073-1510915933:476100..476149Clytia hemisphaericaexon
TCONS_00007080-exon-sc0000073-1510915933:475886..475968TCONS_00007080-exon-sc0000073-1510915933:475886..475968Clytia hemisphaericaexon
TCONS_00007080-exon-sc0000073-1510915933:475316..475464TCONS_00007080-exon-sc0000073-1510915933:475316..475464Clytia hemisphaericaexon
TCONS_00007080-exon-sc0000073-1510915933:473799..474487TCONS_00007080-exon-sc0000073-1510915933:473799..474487Clytia hemisphaericaexon
TCONS_00007080-exon-sc0000073-1491911889:485829..486299TCONS_00007080-exon-sc0000073-1491911889:485829..486299Clytia hemisphaericaexon
TCONS_00007080-exon-sc0000073-1491911889:484033..484143TCONS_00007080-exon-sc0000073-1491911889:484033..484143Clytia hemisphaericaexon
TCONS_00007080-exon-sc0000073-1491911889:482918..483042TCONS_00007080-exon-sc0000073-1491911889:482918..483042Clytia hemisphaericaexon
TCONS_00007080-exon-sc0000073-1491911889:480301..480375TCONS_00007080-exon-sc0000073-1491911889:480301..480375Clytia hemisphaericaexon
TCONS_00007080-exon-sc0000073-1491911889:479962..480000TCONS_00007080-exon-sc0000073-1491911889:479962..480000Clytia hemisphaericaexon
TCONS_00007080-exon-sc0000073-1491911889:479621..479725TCONS_00007080-exon-sc0000073-1491911889:479621..479725Clytia hemisphaericaexon
TCONS_00007080-exon-sc0000073-1491911889:478945..479033TCONS_00007080-exon-sc0000073-1491911889:478945..479033Clytia hemisphaericaexon
TCONS_00007080-exon-sc0000073-1491911889:478249..478341TCONS_00007080-exon-sc0000073-1491911889:478249..478341Clytia hemisphaericaexon
TCONS_00007080-exon-sc0000073-1491911889:477984..478044TCONS_00007080-exon-sc0000073-1491911889:477984..478044Clytia hemisphaericaexon
TCONS_00007080-exon-sc0000073-1491911889:477347..477405TCONS_00007080-exon-sc0000073-1491911889:477347..477405Clytia hemisphaericaexon
TCONS_00007080-exon-sc0000073-1491911889:476958..477063TCONS_00007080-exon-sc0000073-1491911889:476958..477063Clytia hemisphaericaexon
TCONS_00007080-exon-sc0000073-1491911889:476270..476390TCONS_00007080-exon-sc0000073-1491911889:476270..476390Clytia hemisphaericaexon
TCONS_00007080-exon-sc0000073-1491911889:476100..476149TCONS_00007080-exon-sc0000073-1491911889:476100..476149Clytia hemisphaericaexon
TCONS_00007080-exon-sc0000073-1491911889:475886..475968TCONS_00007080-exon-sc0000073-1491911889:475886..475968Clytia hemisphaericaexon
TCONS_00007080-exon-sc0000073-1491911889:475316..475464TCONS_00007080-exon-sc0000073-1491911889:475316..475464Clytia hemisphaericaexon
TCONS_00007080-exon-sc0000073-1491911889:473799..474487TCONS_00007080-exon-sc0000073-1491911889:473799..474487Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000073supercontigsc0000073:473799..486299 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
Sort Descending | Sort Ascending | Only Non-Zero Values | Tile/Chart | Reset | Show/Hide Values

Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0	0.0873646	0.101439	0	0	0	0.115182	0	0	0.187028	0	0.119333	0	0	0.0508723	0.0545938	0.336275	0	0.285709	0	0.0866209	0.126752	0	0	0	0.0858465	0.122846	0	0	0
Blast
[Close]
BLAST of TCONS_00007080 vs. Swiss-Prot (Human)
Match: DNJC3 (DnaJ homolog subfamily C member 3 OS=Homo sapiens GN=DNAJC3 PE=1 SV=1)

HSP 1 Score: 388.267 bits (996), Expect = 7.086e-125
Identity = 235/472 (49.79%), Postives = 324/472 (68.64%), Query Frame = 3 
Query:  390 MWTETSWLYRVFSSLSVLLMTLDFNFNFIEGNASADVDHHLEMGKRLLAAGQLTEALSHYHSAIEGDPENYMTYFKRATVLLALGRSKTALKDLTKVVELRHDFIRARVQRANIYLKQGNLDEAVVDYEYVIENSPDDNESVE------KKELVEQLRMDVASAQEYFDEHRYQETIDLLQRPLEHSPWSVSLREMRAECFQHTGQYFKAIQDLKPTTKLVNDNTEAYLKVSHLYYALGESEESLKEIRECLKLDQDHKACXXXXXXXXXXXXXFTDAQKYMDREQFSDAIFKLNAALKHEKENIRFIANAKEKLCTSQYKLGDSKEAIKACTEAIELSPQSAHVYCDRAEAYLLEDNFDEALKDFQEAKTINNDHQRAKEGIDRVNKLIKQSKKRDYYKILGVKRNAAKPEILKKFRKLAAKWHXXXXXXXXXXXXXXXXXXXXXXXXXVLTDPEKRQKYDMGEDPLDPES 1787
            M    S   R+ S    LL+ +D  +   E   +ADV+ HLE+GK+LLAAGQL +ALS +H+A++GDP+NY+ Y++RATV LA+G+SK AL DLTKV++L+ DF  AR+QR ++ LKQG LDEA  D++ V++++P +NE  E      K + +++LR    +A   F    Y   I  L + LE   W   LRE+RAECF   G+  KAI DLK  +KL NDNTEA+ K+S LYY LG+ E SL E+RECLKLDQDHK C  HYK+VKKL KL   A++ +   +++DA  K  + +K E     +   +KE++C    K     EAI+ C+E +++ P + +   DRAEAYL+E+ +DEA++D++ A+  N + Q+ +EG+++  +L+KQS+KRDYYKILGVKRNA K EI+K +RKLA +WHPD F  +EEKKKAEKKFIDIAAAKEVL+DPE R+K+D GEDPLD ES
Sbjct:    1 MVAPGSVTSRLGSVFPFLLVLVDLQYEGAECGVNADVEKHLELGKKLLAAGQLADALSQFHAAVDGDPDNYIAYYRRATVFLAMGKSKAALPDLTKVIQLKMDFTAARLQRGHLLLKQGKLDEAEDDFKKVLKSNPSENEEKEAQSQLIKSDEMQRLRSQALNA---FGSGDYTAAIAFLDKILEVCVWDAELRELRAECFIKEGEPRKAISDLKAASKLKNDNTEAFYKISTLYYQLGDHELSLSEVRECLKLDQDHKRCFAHYKQVKKLNKLIESAEELIRDGRYTDATSKYESVMKTEPSIAEYTVRSKERICHCFSKDEKPVEAIRVCSEVLQMEPDNVNALKDRAEAYLIEEMYDEAIQDYETAQEHNENDQQIREGLEKAQRLLKQSQKRDYYKILGVKRNAKKQEIIKAYRKLALQWHPDNFQNEEEKKKAEKKFIDIAAAKEVLSDPEMRKKFDDGEDPLDAES 469
The following BLAST results are available for this feature:
BLAST of TCONS_00007080 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
DNJC37.086e-12549.79DnaJ homolog subfamily C member 3 OS=Homo sapiens ... [more]
back to top