TCONS_00007079 (transcript) - C. hemisphaerica

Overview
NameTCONS_00007079
Unique NameTCONS_00007079
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length2294

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00007079 ID=TCONS_00007079|Name=TCONS_00007079|organism=Clytia hemisphaerica|type=transcript|length=2294bp
AATCGCGATAGGATGTCGAAACCACTCATAAGAAAATGCACCAATGAACA
CAAACCACGAGAAATTTTCAAAGCCGAAAAAGCTTGCATCTACTtgctgt
gatttgattggctctttcatgaTGTAAACAAGTGGAAGGGACAAAAGCTA
TACTTCAAAACATCACTTCCAAACTTTGGCCTGGGCCAGCAGCAAAAACT
GAAGAAAACTTCATGTTTTCTTGAAAATCAAAGCTAACATTATTAATTTC
TTACAAGATGTGGACAGAAACGTCTTGGCTTTACAGGGTATTTTCCTCCC
TTTCAGTTTTATTGATGACACTGGACTTCAACTTTAACTTTATTGAAGGA
AATGCATCAGCAGATGTTGACCATCATTTAGAGATGGGAAAAAGGTTGTT
AGCAGCTGGACAATTAACAGAAGCTCTTTCACATTATCACTCTGCAATAG
AGGGTGACCCTGAAAACTACATGACTTATTTCAAGCGAGCAACTGTATTG
TTAGCCCTTGGCAGATCCAAAACAGCACTCAAAGATCTCACCAAAGTTGT
GGAATTGAGACATGATTTTATTAGGGCACGAGTTCAAAGGGCCAACATAT
ATTTGAAGCAAGGAAATCTCGATGAAGCTGTTGTAGATTATGAATATGTT
ATTGAAAATTCACCAGATGATAACGAGTCCGTTGAAAAGAAAGAGCTGGT
GGAGCAGCTTAGGATGGATGTAGCAAGTGCACAAGAATATTTTGATGAAC
ATCGTTATCAAGAAACAATTGATCTTTTACAAAGACCACTAGAGCATAGT
CCATGGAGTGTTTCTTTAAGAGAAATGAGGGCTGAGTGCTTTCAACACAC
TGGCCAGTATTTCAAAGCTATTCAAGATTTAAAACCAACAACAAAATTAG
TGAATGACAACACAGAAGCATATTTGAAAGTGAGCCATTTATATTACGCC
CTTGGTGAATCAGAAGAATCATTGAAGGAAATCAGAGAATGCCTAAAGCT
TGATCAAGATCACAAAGCATGTCATAAACATTATAAGAAAGTGAAGAAAC
TGGTCAAACTATTCACAGACGCACAAAAATACATGGATCGTGAACAaTTC
AGTGATGCTATATTCAAACTGAATGCAGCACTCAAGCATGAAAAGGAAAA
CATAAGATTTATTGCAAatgcaaaagaaaaattatgtACTTCACAATATA
AACTTGGTGATAGCAAAGAAGCCATTAAAGCTTGTACAGAGGCAATAGAA
CTTTCACCACAAAGCGCACATGTGTATTGTGACCGTGCTGAAGCATATTT
ACTAGAAGATAATTTTGACGAGGctttgaaagattttcaagaAGCAAAAA
CTATAAACAATGACCATCAACGGGCTAAAGAAGGTATTGACAGAGTAAAC
AAACTGATAAAACAATCCAAAAAGAGAGATTATTATAAAATATTAGGAGT
TAAAAGGAATGCAGCTAAACCAGAAATCTTGAAGAAATTTCGTAAGTTAG
CAGCAAAATGGCATCCTGATAAATTTCctgaagatgaagaaaagaagaaa
gcaGAAAAGAAATTCATTGATATAGCAGCAGCAAAAGAAGTTTTAACAGA
TCCAGaAAAACGACAAAAATATGATATGGGTGAGGATCCTTTAGATCCCG
AATCTCAACAAGGCCAAGGTTTCAACCCATTCCAGCAAGgttttggtggt
tttggtgatgGCTTTGGAGACTTCAAGTTTCATTTTAATTAGGttttttg
ttgttattttctatgttatttaaaaatagtttaaaatagTCCTCCTTTAG
GCATAGGCAAGAGGTTCTTAAAGTTTGTGAACAACATAAGCTTTCAAAGA
agactaaaatatttttttttatgacttgaattTATTAACTACTCTACCCA
AACCTCTTGACTATGCGAAATGGTTGTCTTTTTAGCCTTTCACGCAAACT
TTTATATCCttgattattttgaaagacTTGGATTTTTAGAACAAAATTTG
TTGTGTTTTTTAACTTTGCTTTTTCTTTGCGTTTTCTATTTCTAGTGAAG
GTTTATAACAATGTGTCAACTTCATACTTTTCACAATTTCTGATCCCTTT
TAATCACTCTTaactgttttattttttatttcttaaaattattTACTTCT
GTGCCGTTTCCTcatcaatgttttttaaaagataataTTTGTACCAAGTC
TCTAGGCTATGAAatacaaaaacaagcaaaacagaaatatcagtccaatt
tctttctttttgaaacaTATCTTGTTTAAGAATTCTTTTAATAC
Run BLAST on NCBI

transcript from alignment at sc0000073:473799..486167-

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00007079 ID=TCONS_00007079|Name=TCONS_00007079|organism=Clytia hemisphaerica|type=transcript|length=12369bp|location=Sequence derived from alignment at sc0000073:473799..486167- (Clytia hemisphaerica)
AATCGCGATAGGATGTCGAAACCACTCATAAGAAAATGCACCAATGAACA
CAAACCACGAGAAATTTTCAAAGCCGAAAAAGCTTGCATCTACTTGCTGT
GATTTGATTGGCTCTTTCATGATGTAAACAAGTGGAAGGGACAAAAGCTA
TACTTCAAAACATCACTTCCAAACTTTGGCCTGGGCCAGCAGCAAAAACT
GAAGAAAACTTCATGTTTTCTTGAAAATCAAAGCTAACATTATTAATTTC
TTACAAGATGTGGACAGAAACGTCTTGGCTTTACAGGGTATTTTCCTCCC
TTTCAGTTTTATTGATGACACTGGACTTCAACTTTAACTGTAAGTATATG
ACGTCTATAGGTTTTATACATACTTTTTCTTTTCCGCCTCTCTTGGTGTT
GACCGAATCGATACACACAGATAATTTGCATTTCTTTCTAGAATAAAAGT
ATTTGCAGGGGTACCATGAAGATGGGTAACTTTTATCAGCAGAGGCTAAC
ATGCATAGCCCTCGAATGAAGGACCTGGCTGGTCCTTAAAATACAAAGTT
AAATCAAAACAAAAATGGTAGATTAGATAGAAGAGCTGCAAGCAGAGCTG
CATAGTTCATTTGTTTTGAAATTTTACTGCTTTGATTGCTCAGTCATTTG
ATTTTTTTTCAACTGATGTTTCAACCAAATATTTGGACTTTAGTCTATGG
TGGTAGCTTGTACAGTCAGGGAAATCCCCTCGATTGCGGTAGTAAATTTT
TACTGCAATTGCAGTATAAACGTTACTTTTACAATTTTCATATACCGCAA
TTGCAGTATATTCAAGAATCAGCATTCAAGATTCAAGGACAAAACAGGCA
ATTTTTGTTCATAATTGATCATATCTTTTTAACGCACAGACAAAATATTT
TTTCCGTAGATCAGATTATTTTAATAAGGAAAAGCTTTCTTCTCATACAA
TTTTTTATAGTCGATGTTTGTTTATCTTTGTCTACCAGCACTATATTTAG
TCGTTATAAGCCTTTGAAGGCTAAACACAAATGAAAACTACCGCAATTGC
AGTATACCCTAATTGAGGGATTTCCCTGACTGTTGTATAGAACTCAGAAA
GAGTTTGAAGACTTTAAGAAACACTCTGCTAAACTTTCAAGGGTGTTTTT
GCAAATTTTTGGATGCTTTGAAATGGATCTTTTTGCTTTTCATCCACCAT
CTATCTTGCTTGGATTATACTGTATATGCAGATACAATGGTGTGGCAAAT
TTGTTGTGGCCAGATTTCATACATAAAAAAGTATGCAAAACCTATGTAAA
AACATTTCTTTCTAGCGAAAGGTCTATTTTGAAGGGGCTGGTTCTGAAAG
AAGAGAGAATATGATTTTTTCTGGTTTTCAAGAGAAGCAAAATTCTTCTA
CAAGATAACACTTTAATATAATACCAACTATACAACTTTTATATTAATAC
TAGTAAGTTGGTCTAATATCGACATCCCCCGTCTAATTCTGACACCCTTC
TTTAGGCGGCAATCAGAAATATCTTCGTTTCACGTCGCCCGACCGACTCA
CAAAAATTGAGTAGAATTGAGTCGTTGAGTCGGTAAATTTGTCGGACTTT
TTCTCAGACTTTTTCTGTCAATGACCTTTCCTTTGTTCAAAAATTTTATT
ATTGCCGATTTTTTGCGAGCGATTTCAAGCGTCGCAGCATTTTGACTTTG
TTTATCATTACATGCGCCATTTTGGGGTTGGACGTCACAGTGTTCAAAGA
ATGCACTCCAAAAATGGTTGGAAAAATGGAAACCCGAAAATTTTCGAATT
TTCCAAGATGGCAGATGGAAAAGGGAAAACGTCTATCTGTTTTGTAAGGA
AAATTCTTTTGACTTGGTCATGCCAATTGGTAGAGTTTTGGTCCGAACCA
TAATTTTGGTTGGGTCAATTCAATCTCTGTAAGGGTCACCTTAGAGAAAA
AGAGTCTCTGTCTTGAAAAAAGTGTGCTAAGTGTGGTAAAGTAGTTCTAA
TAATATTGCTTTATTATTTTTCAGTTATTGAAGGAAATGCATCAGCAGAT
GTTGACCATCATTTAGAGATGGGAAAAAGGTTGTTAGCAGCTGGACAATT
AACAGAAGCTCTTTCACATTATCACTCTGCAATAGGTAAGTTTAAAGGGA
TATACTATGATCACAAACTTTCTTACAAAATCCAATAATTTTGTTTTCTA
ATTTTTTTAAGTTAATAAATTACAATTATGTATTGTGTTATATGACTGCA
TGTAACATATCAAAATCATTTGATTTAGAGGGTGACCCTGAAAACTACAT
GACTTATTTCAAGCGAGCAACTGTATTGTTAGCCCTTGGCAGATCCAAAA
CAGCACTCAAAGATCTCACCAAAGTTGTGGAATTGAGACATGATTTTATT
AGGGTAAGATTACTTTCTGTTAAAATATATGTTTATTTGTTTATTGTTTA
CATATACATTAACATTATCTGACACCATACTGTGCAGGGGAGGTTCAAGG
TCCCACCACTTGAGAAACTGCCACCTCATAATTGACTTGAAATATTTATT
TAAAAAACGCTCTATTCGTATCATAGACCTTTTNCAGTGTTCAAAGAATG
CACTCCAAAAATGGTTGGAAAAATGGAAACCCGAAAATTTTCGAATTTTC
CAAGATGGCAGATGGAAAAGGGAAAACGTCTATCTGTTTTGTAAGGAAAA
TTCTTTTGACTTGGTCATGCCAATTGGTAGAGTTTTGGTCCGAACCATAA
TTTTGGTTGGGTCAATTCAATCTCTGTAAGGGTCACCTTAGAGAAAAAGA
GTCTCTGTCTTGAAAAAAGTGTGCTAAGTGTGGTAAAGTAGTTCTAATAA
TATTGCTTTATTATTTTTCAGTTATTGAAGGAAATGCATCAGCAGATGTT
GACCATCATTTAGAGATGGGAAAAAGGTTGTTAGCAGCTGGACAATTAAC
AGAAGCTCTTTCACATTATCACTCTGCAATAGGTAAGTTTAAAGGGATAT
ACTATGATCACAAACTTTCTTACAAAATCCAATAATTTTGTTTTCTAATT
TTTTTAAGTTAATAAATTACAATTATGTATTGTGTTATATGACTGCATGT
AACATATCAAAATCATTTGATTTAGAGGGTGACCCTGAAAACTACATGAC
TTATTTCAAGCGAGCAACTGTATTGTTAGCCCTTGGCAGATCCAAAACAG
CACTCAAAGATCTCACCAAAGTTGTGGAATTGAGACATGATTTTATTAGG
GTAAGATTACTTTCTGTTAAAATATATGTTTATTTGTTTATTGTTTACAT
ATACATTATCTGACACCATACTGTGCAGGGGAGGTTCAAGGTCCCACCAC
TTGAGAAATTGCCACCTCATAATTGACTTGAAATATTTATTTAAAAAACG
CTCTATTCGTATCATAGACCTTTCCTTCTCTCATTTCAATTTCTTCTCGG
GTAGGGCTAGAAACAGTAAACTATCGATTATATAAGTTTTTTTGATTCAG
AGTTGGTATCTGATTCTTAATATTTTATTAACTAAGGCCTGTATGTATAT
TCCACTTGAACAACAGGCTAAAACGAACTCAAAACCAAAATAAAAATGTA
AAAAATATCCAAAATAAAAATTTACAAATACAACAACAGAAACTTTTTTT
GGTTTGTTTTCTCAGATTAAAAATACACTCTTCTCGAGATGCATATATTT
ATTGTTGTCCTCGTTTTCAAACAGATTTTATTGCTATAAAATTACATATT
CACAATGATAATTGTGTTGTTTACACCTCATGAGACATTTTGAATTTCAA
GTACTTTTATTTTAGAGTTAATGTTTGCCTTTTGGGAATTTACATTGGTT
AAAATGTATAATTTCATAGCAATGAAATTTGTTTGAAAACGAGGACAACA
ATAAATTTATGCATCTCGAGAAGAGTGTATTAATGAGGGGAAAATTAAAT
AGGTTTACTTAGTGAAAGTGAAAATAAAACAGTGTCAGGAATAAACCTTT
TGCTAGTTACAATGTTGTGTTGAATAATTAAAAACTCCTGCACCCAAAAC
AATGATAAGTAAAATTCAAAGCACAATTTTAATGATTATGCATCAATGTG
TCGTTGTTTCANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNCAC
AATGATCAAAGATTTACAGGCAAGATATCAGGAATACATCAAGGATAAAA
ATCAAGTTACCAATCTAATACAGAGCCAGTTTTCCACGCTAGAAACAAAA
TTAACATCCAAGATAGAAGAGACGTTGAATAACAAGACTGCAAAAATTCA
AACCGCAACAGAACCACGTAAGAAAAGTTTTGCTGAAGCGACTAAAAACA
ACGATCAATTAAGTGTAAATAGCATGAAACAGCTACTACGAGAGGAAAAA
ATCGACGAACAAATTGAGGACCAAAGGAAACTATCGACAGACGCAAATAT
CATTATCCATGGGGTAANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNTGAATTGAAACAACACGAGAAGTACGTGAAATT
AAGTATCACCGACGACTTGACAAAAATGGAGAGGGAACAAATCAAAGAGT
GGAAAAAGAGAGCAGACAAGATGAATAAAGCCAGATCGAATGACGATTTT
AAATGGAGGGTACGAGGAAGCCCTCGTGAAAAGTTATATTTTAAAAAGAT
TTTTGGACAAGAACGGTTTAGAGGCCCTTGTGCCTCAACTGTAATCACCT
TACAAATTGTAAAGTAGCGTTGACTTTTATTAGCCTTTGTTGCTACCTGT
TCGTCAACTTGAAATAAACTATTACATACATACATACATACATTTCAGAT
TGTTTTAGTGTTGGATTTTTTTACTTATTCAACATAACTAGGAAAAGGTC
TATATAAATTGTGCACCTTTTGAAGCACAACGTTATTGCAGTCAAAAAAA
AAAAAAATTGCTCAATAAAGAATTGGAGATTGTTCAAAGAATTTTAAAAT
TACATAGTTTGGGGAAAATTGCTGCTTTGTAAAATTTGCAGAAGTCCCAC
CTGAACTTCTCTAGTCCCACTTAAGCCTAATTCCCTCACCTCAAAGCTCA
GAATTCACAATTCCTCTCAATTTAGGCTAAAAAATCCAGGGGGGTTGCAC
ACTATGGGCACTATGAGTAAGTGACCATGTTAATGATACACAAAATTTAT
TTTCAAATGACATTAAGATAGGATGCAGCATCTTTGTGTCAAACGTCTGT
TAAATGTGTATGAAACCCACATTATTTTTGGGGCACAGATTTATATAGAA
GTGTTGTCAAATATCTTGGCTAAAAATATTGTAAGCAACTTCCTTTCCCA
GCGCTTCCAGGAATAAATTAAGTGATCATTTTTTAAAAGGTTTATGATGT
CTGTTGTTGATACTTCTAACTTTTTTATGATCTTCAAAATTTGTGTTTTG
TAACCCATACAGTCACACTTCATTGAACTTTCTTATATTTAGGCACGAGT
TCAAAGGGCCAACATATATTTGAAGCAAGGAAATCTCGATGAAGCTGTTG
TAGATTATGAATATGTTGTAAGAAGCATTGTTTTTCTAAGTTCAGGTCTT
GGTTGGGAATAATTGCCTAAATTTGCGTTCAATATTAGGTCTGCTCTATA
TTCTGTCCTGCACAATACAGCCTTCGGTATTGTTGAACCCTATTAGTTTT
TTCTTGTGGCCTTAATTCAAATCCGCTTCCAGACAAATTTAATTCAAGTC
TCACTTAATTTTGCTAGTTTGTTTTTTATTATGTCAAAAGTCACGCCTTA
AAGCAGGATATGCGTAAGGGTCTCTGCTTAATTTTTGAATAACAGCTTTT
TCAATTTACTGTCTCAGATTGAAAATTCACCAGATGATAACGAGTCCGTT
GAAAAGGTTTGTCTTGGTTTCCTGAATAGAAATGACCTATTGCTTTTTGT
ATGTGTAAACCCAGCAGAATCATGACATCTAATAAAATATAGAGGTTGAT
ATAGATTTTATTTATTAGTGATTTAATTCTGAAATCATATCCAAATTCTT
TTCATCTTCTAAAACACAGAATCACAGCAAATTCATCACCATAATATTAA
CAACCTGAAATTACTCCTTTTAAATTATGCCTTGCATTTCAGAAAGAGCT
GGTGGAGCAGCTTAGGATGGATGTAGCAAGTGCACAAGAATATTTTGATG
AACATCGTTATCAAGAAACAATTGATCTTTTACAAAGACCACTAGAGGTT
TGAACTATTATAAAGCATGTTAATCTTACCTTACTTTAATGTAATGTGAA
ATATCAATGCTGAAAGAATTTCAGAATCGATGAATGTTGCAGTCTGACAA
ATGTTGGTTATATATTATACCGAGTGTGCCAGAAATGAGTTACTCTTTGA
CTTGATATTGCAGTCAGTAGCAGAAAGATTTTTCAAAGATTGGTTCGGAA
TCATTTAGAGGAAAGCCTAACTTAAAATTTGGTGTATTACTTTTTAATTT
TACTTCATTGGTTCAAAAGTTATGTTAAAAAACCTGAAATGGCAATTTTA
AAAGATGTAAAAAAAAGGCAAAAAATTTTCTACTGTCTACAATATCAAAT
CAAAGAGGGTAGCTTATTATGGCACACTCGGTACAATGGAATAATTTATG
TCTTTTAATAAAAAAAAGACCACACTTAAATCAGAAAGTTCTAAGTAAAT
GATATTAATCTCAAAGATGCCCCAGTCTGTCCTTTTTCCTTAAGATAATT
ATTAATGACTTTCTATTGAGAAACTTTTCTGCCCACTTTCAATAAAATCT
TTGTTATAATTTTAAATTATGTTTTCTATTTCAGCATAGTCCATGGAGTG
TTTCTTTAAGAGAAATGAGGGCTGAGTGCTTTCAACACACTGGCCAGTAT
TTCAAAGCTATTCAAGATTTAAAGTAAGTCTTCATGTTGTAAAGTAAAAA
GCACTTAAATATTCCTTCCTTCCTTCAATGTTGTAGAATTAACGTGTTAT
AGTTGAAAGCTTGAATGTCTTTCTTTTTAATGATTTTCTTTTATTGATTT
GAGTATGTCTTTAGTAATTCATAACATAATAAGGTCAGCAAACGGAATTG
GTTTTCTTTGACAGCAATAAAATATACCTAATGTGACAGAAATTTAAAAA
GTTCTATCGTGGTATACTAATATCTCATCTCATGGCCCCCGGCGTGCGCA
TCGAATTGAGGGGGCCAAAAAAATATGTTGCCCACCATGGTTGGGCGACG
AAGAAAATTTTCGACTTTTTGCCCTTGTTTNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNGGGGGGG
GGGGCCTGGCCCCCCTGGCCCCCCCGGTGACGGGGGCCATGCATCTTATT
CATAATATTGCATGGATATTTTATAGACCAACAACAAAATTAGTGAATGA
CAACACAGAAGCATATTTGAAAGTGAGCCATTTATATTACGCCCTTGGTG
AATCAGAAGAATCATTGAAGTAAGTTTCTGTGTAATCATAATTTTATTTA
CTCTGAGAGAAACATATTCTCATATTCATGAAAAAAAAACTCTCCAAGTA
ATTCTTTCGTCCCTTTTTAACAACAATTGTAATTGAATTGTAATTCAATT
AAATAGGTTAATAAAAATCAGCAATGCTTAGAATTTCTATAACCCTTTTC
ATTGTTTTTTATTCTTTTATTAGGGAAATCAGAGAATGCCTAAAGCTTGA
TCAAGATCACAAAGCATGTCATAAACATTATAAGGTAGTTATTTTCAACT
TGCACAGCTATCTTATTCTTTTGTTTTGTTGCACTTCCATCCACAGTTAC
AAGCTAGTAACTGAGTTAAAATGTCTCCAAACATGCAGAGTGTGCAGAGG
GGTCTAAACCCTCCCATTTTTATTTCATCTCCCCTATATGTGAATCCCCT
CAATTAAAAAAAATTTTCTAAACCGTTCTACCAGTCATTCAGAACCAAAA
ACATTGAACTAAAAGTTATATGAAAAAAGAGTTTAACATGGTGCAGCAGG
CAAAAATTTAGCTATCTACACTTGTTTTTAGTTGACCCACACCAAATATC
TTAATCAATATTAATATGATAGATATTTTGACCAAAAGTTGTTATCCCCC
TATTTTTACTTTCCCCCCCCCCCCCCCCCTAAAATCTTAAACCCCCCATT
TCTTTCGGGAAATCTCCTATCCGGGGGATAAAGCATTTTTGGAAAAGTTG
GATCCCCCCTTAAAAAGGGGGGGGGATTCACACTATGACATGACATTACT
ACTGTGGATTTGTTTTGTTCAGATGAATACTATTCTGAAATTTTTATGAC
CCTTTATTGCAGAAAGTGAAGAAACTGGTCAAACTATTCACAGACGCACA
AAAATACATGGATCGTGAACAGTAAGTCATCACTAATAAACTTTAATAGA
TAATTCTTTTAGGGTTAGAAGCCTCATGTTTCATGCAATGTAGTACGTTA
TCAAGCGCTGATTTTTAATCTTAATCCTTGATTATTAATTGTGATCTACA
TTGAACTATTCAATCATGGTGGTAAAATTGAAATATTTGTTTTTATTCAG
TCTTACAACTTTGACCTGGCCTCTTTTGCTCTGGTTTGAGAGCTCACTTT
TTTACCTGCTTTTTATGCAGTATTTCACTTTTATCCTTTAATTTTTTTCA
ACAGATTCAGTGATGCTATATTCAAACTGAATGCAGCACTCAAGCATGAA
AAGGAAAACATAAGATTTATTGCAAATGCAAAAGAAAAATTATGTACTTC
ACAATATAAAGTAAGAAATTCATCTTCAAGATTTTAATACTAAGAAGTAG
TAAGGTTACTAAGTACTGTTTCTATACTTAGATAAAATTTTGCATTTCTT
TTGCGTAAGAATTTCAATAATTTTCAACATTGGGCTTTTCCAGAAAAAAT
TCGTTCATGGGGGGTGGAGGATATATTATTTTTTCTGTGATCTACTAATG
GACATTTCGATTTTTCACCCCCTGGACACGTGTTTTACCCCTGGACAAGC
ATCGAGTTGACCCCCTGGACACAAATATTTACCCCTGGACATCGCAGATT
TACCCCATGGACATGGCAGTTTTTCAGGGTTTTTTCAATACCCCTGGACA
ATATATCCTCCACCCCCCATGAATGGTTTTTTTCTGGAAGAGCCCATTAC
ATTATCATTAAATATTCTCTAATTGATTATCTAGTCTTTAACCTTACTGC
AACTTACTGCTTTCAACCCCTTCATTTCAAAGAACCCTTGAGCTTTGTCT
CTGGTTTTTCATTGATTTTCCAGTTTTAGCCAAATACTAACAGTAAAATT
AAAATTCAATCACTCACTTTCTTTTAGCTTGGTGATAGCAAAGAAGCCAT
TAAAGCTTGTACAGAGGCAATAGAACTTTCACCACAAAGCGCACATGTGT
ATTGTGACCGTGCTGAAGCATATTTACTAGAAGATAATTTTGACGAGGGT
ATGTTTATCTTGTTTATTCAAGTCTTACATGTAAACAAGAGTTTTGCTTT
ACTAAATACATAGAAGCTAATTTCTAAGCTAATTTCTGATTATTTTATAA
CATATTTTTTCATTATAGCTTTGAAAGATTTTCAAGAAGCAAAAACTATA
AACAATGACCATCAACGGGTATTTCTTTAAATTTATTTCATTTCATTATT
GTCATACAAAATACTCTTCTTTTCTGTTCATATTCATCACTATGAAAGAA
GCTAAATCTTTTTTAGCCAAACTTAACTTTTGTTTGTCTATCTTTTCAGG
CTAAAGAAGGTATTGACAGAGTAAACAAACTGATAAAACAATCCAAAAAG
AGAGATTATTATAAAATATTAGGAGTTAAAAGGTATGCTTTATTAATTTA
TTAAGGTATTTTTATATTTTAGACTAATGGGCTCACGAGAATAGCATTTT
TTCATTTTTTCTTTCTTTTGTTTCAATTTTTTATTATAATTTTACAACTT
TTTACGACCTATGACTTGTAAAAAACTGAGATTTTTTTCAACAAAATTTT
GTATGCAGCTGATGATCTTCTGGACTTTTTTGTTGTTGATAATCAATTTC
ACCTTATTTGATATCTTATATCTGGTCCTAGTGATTCAAAAGTGAACTTT
GTTTTGCATGGTGGTGTAAACTTCATACATTCTATTTGTTTGGAGGGTTG
CATGTTTTTGGGCTACAAACGTTTTTAAATTGATGCTCTAAACAAGGAGA
GCCGTGAAATTTGTTTTCATACTTCCCTTGATGTCTGTGTTTTGTTTTTA
CAGGAATGCAGCTAAACCAGAAATCTTGAAGAAATTTCGTAAGTTAGCAG
CAAAATGGCATCCTGATAAATTTCCTGAAGATGAAGAAAAGAAGAAAGCA
GAAAAGAAATTCATTGATATAGCAGCAGCAAAAGAAGTTTTAACAGATCC
AGGTACTTTTAATAGATCTTATCAGAGTTTTTGATTTTTCTAAAAAAGCG
ATGCATTGTGGGATTGTTTCGGGAGTATTACAATAGAAATCTCTTAGGAA
TTCCTCGAGGGAATTATATTGTAATGCTCCCGAAACAATCTTACAATGCA
TCGCTTTTTTAGAAAAATAAAAAACTCTAAGATCTTTTCTTTTATCCCAT
TTATTTTACCCTGCCATTGGTTTTTACAGACTTTAAAGTAATGCATGATT
TATGATTCACAGTCTAGAAGACTATAAATTTAAATATGAATTTCATTTGA
AATGAAGCATGTAGAATTTTGATTTTTTGGTTGGTTTTATTTTTGAAAAG
AATTCATTTCTAGCTCTTTGCACATAGTGCGGAAAAGGGTCTGATCCCCC
CCTTCTTGGCATCCCCCAACCTTTAAAAATGCCTATCCCCCAAGGATTTT
GGGCTAAATTTTTTATGGTAAAAAGGGAAGGGAAATAGTAAAGAAAAATT
AAGTCTGGCAAATATAATACCACTTTTTAGTGAAAATAAAGAACTTCCTT
TCATGCAGACCAAATTTCATAACAGTGCTGGAAAATAATCTACAATATTT
GTAAGCCCCCCCCTTCTTAAACGATCCCCCCTCCTTGCTATCCCCCCCTT
TTTAATGAAAATTTCTGATCCCCCTCCCCTTCTTCACTTTTTTGAAGATG
TCATCCCTCCCCCTTAAGAAAGGGGGCGGGGGGGTCCGAACTATGTTAGC
ATGAACTTTATGTCAATCAAATATGACAAAGTTTGTAAAGTTGAGTTCAA
ATATTGAATGAAGAATTTTTTGCATTTTAGAAAAACGACAAAAATATGAT
ATGGGTGAGGATCCTTTAGATCCCGAATCTCAACAAGGCCAAGGTTTCAA
CCCATTCCAGCAAGGTTTTGGTGGTTTTGGTGATGGCTTTGGAGACTTCA
AGTTTCATTTTAATTAGGTTTTTTGTTGTTATTTTCTATGTTATTTAAAA
ATAGTTTAAAATAGTCCTCCTTTAGGCATAGGCAAGAGGTTCTTAAAGTT
TGTGAACAACATAAGCTTTCAAAGAAGACTAAAATATTTTTTTTTATGAC
TTGAATTTATTAACTACTCTACCCAAACCTCTTGACTATGCGAAATGGTT
GTCTTTTTAGCCTTTCACGCAAACTTTTATATCCTTGATTATTTTGAAAG
ACTTGGATTTTTAGAACAAAATTTGTTGTGTTTTTTAACTTTGCTTTTTC
TTTGCGTTTTCTATTTCTAGTGAAGGTTTATAACAATGTGTCAACTTCAT
ACTTTTCACAATTTCTGATCCCTTTTAATCACTCTTAACTGTTTTATTTT
TTATTTCTTAAAATTATTTACTTCTGTGCCGTTTCCTCATCAATGTTTTT
TAAAAGATAATATTTGTACCAAGTCTCTAGGCTATGAAATACAAAAACAA
GCAAAACAGAAATATCAGTCCAATTTCTTTCTTTTTGAAACATATCTTGT
TTAAGAATTCTTTTAATAC
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_003960XLOC_003960Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00007079-exon-sc0000073-1575043694:485829..486167TCONS_00007079-exon-sc0000073-1575043694:485829..486167Clytia hemisphaericaexon
TCONS_00007079-exon-sc0000073-1575043694:484051..484143TCONS_00007079-exon-sc0000073-1575043694:484051..484143Clytia hemisphaericaexon
TCONS_00007079-exon-sc0000073-1575043694:483186..483203TCONS_00007079-exon-sc0000073-1575043694:483186..483203Clytia hemisphaericaexon
TCONS_00007079-exon-sc0000073-1575043694:482918..483042TCONS_00007079-exon-sc0000073-1575043694:482918..483042Clytia hemisphaericaexon
TCONS_00007079-exon-sc0000073-1575043694:480301..480375TCONS_00007079-exon-sc0000073-1575043694:480301..480375Clytia hemisphaericaexon
TCONS_00007079-exon-sc0000073-1575043694:479962..480000TCONS_00007079-exon-sc0000073-1575043694:479962..480000Clytia hemisphaericaexon
TCONS_00007079-exon-sc0000073-1575043694:479621..479725TCONS_00007079-exon-sc0000073-1575043694:479621..479725Clytia hemisphaericaexon
TCONS_00007079-exon-sc0000073-1575043694:478945..479033TCONS_00007079-exon-sc0000073-1575043694:478945..479033Clytia hemisphaericaexon
TCONS_00007079-exon-sc0000073-1575043694:478249..478341TCONS_00007079-exon-sc0000073-1575043694:478249..478341Clytia hemisphaericaexon
TCONS_00007079-exon-sc0000073-1575043694:477984..478044TCONS_00007079-exon-sc0000073-1575043694:477984..478044Clytia hemisphaericaexon
TCONS_00007079-exon-sc0000073-1575043694:477347..477405TCONS_00007079-exon-sc0000073-1575043694:477347..477405Clytia hemisphaericaexon
TCONS_00007079-exon-sc0000073-1575043694:476958..477063TCONS_00007079-exon-sc0000073-1575043694:476958..477063Clytia hemisphaericaexon
TCONS_00007079-exon-sc0000073-1575043694:476270..476390TCONS_00007079-exon-sc0000073-1575043694:476270..476390Clytia hemisphaericaexon
TCONS_00007079-exon-sc0000073-1575043694:476100..476149TCONS_00007079-exon-sc0000073-1575043694:476100..476149Clytia hemisphaericaexon
TCONS_00007079-exon-sc0000073-1575043694:475886..475968TCONS_00007079-exon-sc0000073-1575043694:475886..475968Clytia hemisphaericaexon
TCONS_00007079-exon-sc0000073-1575043694:475316..475464TCONS_00007079-exon-sc0000073-1575043694:475316..475464Clytia hemisphaericaexon
TCONS_00007079-exon-sc0000073-1575043694:473799..474487TCONS_00007079-exon-sc0000073-1575043694:473799..474487Clytia hemisphaericaexon
TCONS_00007079-exon-sc0000073-1510915933:485829..486167TCONS_00007079-exon-sc0000073-1510915933:485829..486167Clytia hemisphaericaexon
TCONS_00007079-exon-sc0000073-1510915933:484051..484143TCONS_00007079-exon-sc0000073-1510915933:484051..484143Clytia hemisphaericaexon
TCONS_00007079-exon-sc0000073-1510915933:483186..483203TCONS_00007079-exon-sc0000073-1510915933:483186..483203Clytia hemisphaericaexon
TCONS_00007079-exon-sc0000073-1510915933:482918..483042TCONS_00007079-exon-sc0000073-1510915933:482918..483042Clytia hemisphaericaexon
TCONS_00007079-exon-sc0000073-1510915933:480301..480375TCONS_00007079-exon-sc0000073-1510915933:480301..480375Clytia hemisphaericaexon
TCONS_00007079-exon-sc0000073-1510915933:479962..480000TCONS_00007079-exon-sc0000073-1510915933:479962..480000Clytia hemisphaericaexon
TCONS_00007079-exon-sc0000073-1510915933:479621..479725TCONS_00007079-exon-sc0000073-1510915933:479621..479725Clytia hemisphaericaexon
TCONS_00007079-exon-sc0000073-1510915933:478945..479033TCONS_00007079-exon-sc0000073-1510915933:478945..479033Clytia hemisphaericaexon
TCONS_00007079-exon-sc0000073-1510915933:478249..478341TCONS_00007079-exon-sc0000073-1510915933:478249..478341Clytia hemisphaericaexon
TCONS_00007079-exon-sc0000073-1510915933:477984..478044TCONS_00007079-exon-sc0000073-1510915933:477984..478044Clytia hemisphaericaexon
TCONS_00007079-exon-sc0000073-1510915933:477347..477405TCONS_00007079-exon-sc0000073-1510915933:477347..477405Clytia hemisphaericaexon
TCONS_00007079-exon-sc0000073-1510915933:476958..477063TCONS_00007079-exon-sc0000073-1510915933:476958..477063Clytia hemisphaericaexon
TCONS_00007079-exon-sc0000073-1510915933:476270..476390TCONS_00007079-exon-sc0000073-1510915933:476270..476390Clytia hemisphaericaexon
TCONS_00007079-exon-sc0000073-1510915933:476100..476149TCONS_00007079-exon-sc0000073-1510915933:476100..476149Clytia hemisphaericaexon
TCONS_00007079-exon-sc0000073-1510915933:475886..475968TCONS_00007079-exon-sc0000073-1510915933:475886..475968Clytia hemisphaericaexon
TCONS_00007079-exon-sc0000073-1510915933:475316..475464TCONS_00007079-exon-sc0000073-1510915933:475316..475464Clytia hemisphaericaexon
TCONS_00007079-exon-sc0000073-1510915933:473799..474487TCONS_00007079-exon-sc0000073-1510915933:473799..474487Clytia hemisphaericaexon
TCONS_00007079-exon-sc0000073-1491911889:485829..486167TCONS_00007079-exon-sc0000073-1491911889:485829..486167Clytia hemisphaericaexon
TCONS_00007079-exon-sc0000073-1491911889:484051..484143TCONS_00007079-exon-sc0000073-1491911889:484051..484143Clytia hemisphaericaexon
TCONS_00007079-exon-sc0000073-1491911889:483186..483203TCONS_00007079-exon-sc0000073-1491911889:483186..483203Clytia hemisphaericaexon
TCONS_00007079-exon-sc0000073-1491911889:482918..483042TCONS_00007079-exon-sc0000073-1491911889:482918..483042Clytia hemisphaericaexon
TCONS_00007079-exon-sc0000073-1491911889:480301..480375TCONS_00007079-exon-sc0000073-1491911889:480301..480375Clytia hemisphaericaexon
TCONS_00007079-exon-sc0000073-1491911889:479962..480000TCONS_00007079-exon-sc0000073-1491911889:479962..480000Clytia hemisphaericaexon
TCONS_00007079-exon-sc0000073-1491911889:479621..479725TCONS_00007079-exon-sc0000073-1491911889:479621..479725Clytia hemisphaericaexon
TCONS_00007079-exon-sc0000073-1491911889:478945..479033TCONS_00007079-exon-sc0000073-1491911889:478945..479033Clytia hemisphaericaexon
TCONS_00007079-exon-sc0000073-1491911889:478249..478341TCONS_00007079-exon-sc0000073-1491911889:478249..478341Clytia hemisphaericaexon
TCONS_00007079-exon-sc0000073-1491911889:477984..478044TCONS_00007079-exon-sc0000073-1491911889:477984..478044Clytia hemisphaericaexon
TCONS_00007079-exon-sc0000073-1491911889:477347..477405TCONS_00007079-exon-sc0000073-1491911889:477347..477405Clytia hemisphaericaexon
TCONS_00007079-exon-sc0000073-1491911889:476958..477063TCONS_00007079-exon-sc0000073-1491911889:476958..477063Clytia hemisphaericaexon
TCONS_00007079-exon-sc0000073-1491911889:476270..476390TCONS_00007079-exon-sc0000073-1491911889:476270..476390Clytia hemisphaericaexon
TCONS_00007079-exon-sc0000073-1491911889:476100..476149TCONS_00007079-exon-sc0000073-1491911889:476100..476149Clytia hemisphaericaexon
TCONS_00007079-exon-sc0000073-1491911889:475886..475968TCONS_00007079-exon-sc0000073-1491911889:475886..475968Clytia hemisphaericaexon
TCONS_00007079-exon-sc0000073-1491911889:475316..475464TCONS_00007079-exon-sc0000073-1491911889:475316..475464Clytia hemisphaericaexon
TCONS_00007079-exon-sc0000073-1491911889:473799..474487TCONS_00007079-exon-sc0000073-1491911889:473799..474487Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000073supercontigsc0000073:473799..486167 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
Sort Descending | Sort Ascending | Only Non-Zero Values | Tile/Chart | Reset | Show/Hide Values

Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
19.2277	17.6815	7.78546	8.05787	8.23784	6.19233	38.6359	40.2645	31.402	31.0497	38.7537	38.725	44.2706	42.7024	33.6202	32.4557	20.406	26.5779	18.0574	21.2844	22.4501	22.0901	31.8401	33.0978	22.6079	27.85	29.7156	30.3038	24.618	22.1667
Blast
[Close]
BLAST of TCONS_00007079 vs. Swiss-Prot (Human)
Match: DNJC3 (DnaJ homolog subfamily C member 3 OS=Homo sapiens GN=DNAJC3 PE=1 SV=1)

HSP 1 Score: 388.267 bits (996), Expect = 2.258e-125
Identity = 235/472 (49.79%), Postives = 324/472 (68.64%), Query Frame = 3 
Query:  258 MWTETSWLYRVFSSLSVLLMTLDFNFNFIEGNASADVDHHLEMGKRLLAAGQLTEALSHYHSAIEGDPENYMTYFKRATVLLALGRSKTALKDLTKVVELRHDFIRARVQRANIYLKQGNLDEAVVDYEYVIENSPDDNESVE------KKELVEQLRMDVASAQEYFDEHRYQETIDLLQRPLEHSPWSVSLREMRAECFQHTGQYFKAIQDLKPTTKLVNDNTEAYLKVSHLYYALGESEESLKEIRECLKLDQDHKACXXXXXXXXXXXXXFTDAQKYMDREQFSDAIFKLNAALKHEKENIRFIANAKEKLCTSQYKLGDSKEAIKACTEAIELSPQSAHVYCDRAEAYLLEDNFDEALKDFQEAKTINNDHQRAKEGIDRVNKLIKQSKKRDYYKILGVKRNAAKPEILKKFRKLAAKWHXXXXXXXXXXXXXXXXXXXXXXXXXVLTDPEKRQKYDMGEDPLDPES 1655
            M    S   R+ S    LL+ +D  +   E   +ADV+ HLE+GK+LLAAGQL +ALS +H+A++GDP+NY+ Y++RATV LA+G+SK AL DLTKV++L+ DF  AR+QR ++ LKQG LDEA  D++ V++++P +NE  E      K + +++LR    +A   F    Y   I  L + LE   W   LRE+RAECF   G+  KAI DLK  +KL NDNTEA+ K+S LYY LG+ E SL E+RECLKLDQDHK C  HYK+VKKL KL   A++ +   +++DA  K  + +K E     +   +KE++C    K     EAI+ C+E +++ P + +   DRAEAYL+E+ +DEA++D++ A+  N + Q+ +EG+++  +L+KQS+KRDYYKILGVKRNA K EI+K +RKLA +WHPD F  +EEKKKAEKKFIDIAAAKEVL+DPE R+K+D GEDPLD ES
Sbjct:    1 MVAPGSVTSRLGSVFPFLLVLVDLQYEGAECGVNADVEKHLELGKKLLAAGQLADALSQFHAAVDGDPDNYIAYYRRATVFLAMGKSKAALPDLTKVIQLKMDFTAARLQRGHLLLKQGKLDEAEDDFKKVLKSNPSENEEKEAQSQLIKSDEMQRLRSQALNA---FGSGDYTAAIAFLDKILEVCVWDAELRELRAECFIKEGEPRKAISDLKAASKLKNDNTEAFYKISTLYYQLGDHELSLSEVRECLKLDQDHKRCFAHYKQVKKLNKLIESAEELIRDGRYTDATSKYESVMKTEPSIAEYTVRSKERICHCFSKDEKPVEAIRVCSEVLQMEPDNVNALKDRAEAYLIEEMYDEAIQDYETAQEHNENDQQIREGLEKAQRLLKQSQKRDYYKILGVKRNAKKQEIIKAYRKLALQWHPDNFQNEEEKKKAEKKFIDIAAAKEVLSDPEMRKKFDDGEDPLDAES 469
The following BLAST results are available for this feature:
BLAST of TCONS_00007079 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
DNJC32.258e-12549.79DnaJ homolog subfamily C member 3 OS=Homo sapiens ... [more]
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