TCONS_00007075 (transcript) - C. hemisphaerica

Overview
NameTCONS_00007075
Unique NameTCONS_00007075
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length1791

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00007075 ID=TCONS_00007075|Name=TCONS_00007075|organism=Clytia hemisphaerica|type=transcript|length=1791bp
GAAAAACAGTagaaataaaagcaaaaaaatgatCAAGATATCCACCGCAG
GAGGTTATGATCAACTGGTCTACACTGACTTGCCAGAATGTAATTATACA
GAAGGAGCAAACATTGGAATAGAAAAAATTGACAGCTCAGACTGTGTGGT
AGTTGCAACACACGCATGTGGAGTCAATTATGCAGACTGTATCATTCGGT
GGGGTTTGTACAAATCTGCAAAAGATCTAGTAGGCTGGCCAATCACACCT
GGCTTCGAGTTCAGTGGTACCATTACACACGTTGGGGAGAATGTAACAGA
TTACAAGATCGGGGATAAAGTTGCTGGAGTCAGTTTATTTGGATCTTATT
CCAAAAGGCTCAAAGTGCCTGCTTACCAGGTTCGCCATGTACCAGAAAAC
ATTTCCATGTCAGAAGCAGCTGGATTTCTAACAGTTGGATTAACCGCGCA
TTATGCTATATTTGAGTTGTGTAAACTGCGGAAGGGTGATTACGTATTGG
TTCACTCTGCGGCTGGTGGCGTTGGATCCATGCTGGTTCAAATGCTAAAG
AATAAGATTGGCTGCCATGTTGTGGGTGTTGTTGGTCAAACACATAAAGT
GGAGATGGCAAAGCAGCTTGGCTGTGATGATGTGATAGACAAGTCCACTC
AAGATCTGTGGTCAACCGCAGCTGATCTTACAGTTAATGGTTACAAAGCT
ATCTTTGATGCAAATGGTGTTGAAACGCTTCAACAAAGTTACAACAATCT
TGCACGAGGAGGAAGGCTTGTGACGTATGGTTACGCCACTATGATGCCGA
AATCATCGGAAGTTAGTTCGGGAGCGATCAAAACCACAGATTGGATGAAA
CTTCTATGGAAGTATAAAACAACACCCACCTTCAACCCTCTTGATATGAC
GTCAGAAAACAAAAGCGTGATGGCGTTCAACTTGAGTTATATGTTCAATG
AGAAGGAACTATTGAAAGAACTTTTTACCGGGCTTTTCCAGTGGATATCC
GATGGATCCCTCAAAGTCGCCAAAGTGACGGAGTTCTTGATGTCGGATGC
GGGTGGAGCTCATCGCGCGCTCGAGTCTGGTAGCACGGTCGGTAAATTGG
TCCTGCTAACGGAAGGAGATAAACCCATTCAGGAAATGGTAGTtgaggaa
aataaaaatgaaggaaaaaatcatgttgaATCAGACGAAACTAAGCTACT
CTGATGAACAATGGTAGATTTATCGTTGGCACCTTTGCCCCCGCGTTTGC
GCCTTAGTCTGCCAATAGCAAGAACCAATTTTAGCAAAATGAAGCTTTTG
CAAGACTTCCTTAAACCTGATTATCGCTGATTCGTGATTCTAAAAGACGA
TAGCACACAGATTAAAAGTGGTTCTTCcacgaaaaataaaattttaattt
tgatacaCAATATATTAGTTATGAATTTTAGTTATGAATTTTAGTTTACA
CCTGATTATACATATATCAAGATAATGAATTTTGTTAGTATTCCACCTAT
TAGACTTTACAAAACTCTCCTTTGCAAGATAAGAACCGCGGCACACGGCa
aggtttttcaaaaaagtaaaaattgcaAATGGTAGATGAGGGACTAGGGT
GATCACTTTTTATTCAATCTAAATTTGGTTCATTCCTTCTtcttcgattt
tcgaaaacaacacCACTGCCTTACCCATGATGAATGCCACTTTGGTAGAA
CAACTTCACATAAATTTTAGCGAAATATAATAGAGAAAATATGTAGTAAT
TTTATGTTTTCAGTTTTATAATTGTAAAAAATCTAGGCATT
Run BLAST on NCBI

protein sequence of TCONS_00007075-protein

>TCONS_00007075-protein ID=TCONS_00007075-protein|Name=TCONS_00007075-protein|organism=Clytia hemisphaerica|type=polypeptide|length=400bp
KNSRNKSKKMIKISTAGGYDQLVYTDLPECNYTEGANIGIEKIDSSDCVV
VATHACGVNYADCIIRWGLYKSAKDLVGWPITPGFEFSGTITHVGENVTD
YKIGDKVAGVSLFGSYSKRLKVPAYQVRHVPENISMSEAAGFLTVGLTAH
YAIFELCKLRKGDYVLVHSAAGGVGSMLVQMLKNKIGCHVVGVVGQTHKV
EMAKQLGCDDVIDKSTQDLWSTAADLTVNGYKAIFDANGVETLQQSYNNL
ARGGRLVTYGYATMMPKSSEVSSGAIKTTDWMKLLWKYKTTPTFNPLDMT
SENKSVMAFNLSYMFNEKELLKELFTGLFQWISDGSLKVAKVTEFLMSDA
GGAHRALESGSTVGKLVLLTEGDKPIQEMVVEENKNEGKNHVESDETKLL
Run BLAST on NCBI

transcript from alignment at sc0000073:468604..473541-

Legend: exonfive_prime_UTRCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00007075 ID=TCONS_00007075|Name=TCONS_00007075|organism=Clytia hemisphaerica|type=transcript|length=4938bp|location=Sequence derived from alignment at sc0000073:468604..473541- (Clytia hemisphaerica)
GAAAAACAGTAGAAATAAAAGCAAAAAAATGATCAAGATATCCACCGCAG
GAGGTTATGATCAACTGGTCTACACTGACTTGCCAGAATGTAATTATACA
GAAGGAGCAAACATTGGAATAGAAAGTAAGATTTGTGTTTATACTACATA
TCAAGGGTTTTAATATTTGATAGAATTCAAATTAACTAATATAGGTGATC
ATGACACTATGAGATGATTTTTTACTTGTTCATTTTAATTTTTATTTGCC
AAATTTATTTGCATAATTTCCTACTTATAATATCCCACTTTTGAATTTAT
TTCCAACAAGCACAAAAACGCCATTTTATTTGAATTCTATCAAAAGTTAC
AGCCCTTTTACTTTCAGACAGACTTAATTGGATAATGAAGATAGTGGATA
GATAATAATGATAATGAGAACGTTTCTTGGGGAATAATTTTGCTTTAGTT
GGACAAAAATATCGAATTGCATTATCGTGTTTATTTCAAGAAACTATACT
ATTATCATTTAGAAATTGACAGCTCAGACTGTGTGGTAGTTGCAACACAC
GCATGTGGAGTCAATTATGCAGACTGTATCATTCGGTGGGGTTTGTACAA
ATCTGCAAAAGATCTAGTAGGCTGGCCAATCACACCTGGCTTCGAGTTCA
GTGGTACCATTACACACGTTGGGGAGAATGTAACAGATTACAAGATCGGG
GATAAAGTTGCTGGAGTCAGTTTATTTGGATCTTATTCCAAAAGGCTCAA
AGTGCCTGCTTACCAGGTTCGCCATGTACCAGAAAACATTTCCATGTCAG
AAGCAGCTGGATTTCTAACAGTTGGATTAACCGCGCATTATGCTATATTT
GAGTTGTGTAAACTGCGGAAGGGTGATTACGTATTGGTTCACTCTGCGGC
TGGTGGCGTTGGATCCATGCTGGTTCAAATGCTAAAGAATAAGATTGGCT
GCCATGTTGTGGGTGTTGTTGGTCAAACACATAAAGTGGAGATGGCAAAG
CAGCTTGGTTTGTCTCATAAACACATTTACATTTAAAGATCATAATTTGG
CAGATGGATGATATTACCATAATGAATTTAATACAGTCTCTCTGATGATG
AGATCGACTGCAAACAAACAGATCTGGCATAATAGCAATATGTCCAACAC
ATTCCTGATTGTTAATTGTCTTTGTCTGGTTTTGTCTCTGTGATGCATAT
TAGAAACCTTGGTTTTCTCTTACGAATTATGAGATAGGAGAACTAATTTG
TATCTATTACAACAAATTTAATGATATTTTATCTGATTCATTTACCAGGC
TGTGATGATGTGATAGACAAGTCCACTCAAGATCTGTGGTCAACCGCAGC
TGATCTTACAGTTAATGGTTACAAAGCTATCTTTGATGCAAATGGTGTTG
AAACGCTTCAACAAAGTTACAACAATCTTGCACGAGGAGGAAGGCTTGTG
ACGTATGGTAAGAATTAAACAGAGCATTCCCCTTTGAAGATACAGGATTT
TCCTTTGAAAGTACAGAGGATTTCCCGTTGAAAATACAGAGAATTTTCCT
TTAAGAATATAGAGGATTTCCTTTGGAAATACATAGGATTTTCCCTTAAG
AATACATAGGATTTTTCTTTTGAAAATACATAGGATTTTCCTTGGAAAAT
ACATAGGATTTTCCTTGGAAAATAAAGAATGTTCTCCTTTGATTCAGACG
ATATTCCTTTGAAAATACAAACATTTTGCTTTGAAAATGCAAAACACTTT
CTTTTGAAACTCTTTTTTTAAACCCATACCGATTATCATCTTACAGGTTA
CGCCACTATGATGCCGAAATCATCGGAAGTTAGTTCGGGAGCGATCAAAA
CCACAGATTGGATGAAACTTCTATGGAAGTATAAAACAACACCCACCTTC
AACCCTCTTGATGTAAGTGATTGGATGTCCTTTTCTCTACTGACTAACTG
CTTCAAAAAGGTGTTTTTAGCCGCTTCTGATTTGTACTTGAATAATTATT
TTATCTTTGAGTCTATAGAGATGCTAGACATTTTCCGGGTTCTTTTGAGA
TGACTTGGCCTAAAAAAGTGTATAATGCGTCGGAGTCATATCCATTGAAG
GAGAGCCTCGAGGATCTTTTCACTCTGTCTCTTTTTTTGAAAGCCAAATA
AACATCATTGTAATAAACCGATAATACTTAGCTTTGCTTGAATAATTTGA
ATGATCTCTTTGAGTCTATGAAGATGTTATACATTGTCTGGTTCTTTTGA
TATAAATCTAAAATCTACATAAAATTAACATAGAAATTAACATAAAAAAA
CATGCGTATTTGTAATAAAAGTAGCATGAAGGAAGTTTAGAAGTGTGTTT
TACTAGACTCGTTTCTTCCGCAACGAAGAAACTCTATAAGTCTATCCCTA
GAATCGATATATGCTTTAAGATATATATTTGGCATAACGTACGAACAAGG
TTGATACTCGTAGCTTGAAATGTTGTCCTCCTTCACTGGTTACATGGAAA
GCGATAAGATTTAACGTGTNGTTACAACAATCTTGCACGAGGAGGAAGGC
TTGTGACGTATGGTAAGAATTAAACAGAGCATTCCCCTTTGAAGATACAG
GATTTTCCTTTGAAAGTACAGAGGATTTCCCGTTGAAAATACAGAGAATT
TTCCTTTAAGAATATAGAGGATTTCCTTTGGAAATACATAGGATTTTCCC
TTAAGAATACATAGGATTTTTCTTTTGAAAATACATAGGATTTTCCTTGG
AAAATACATAGGATTTTCCTTGGAAAATAAAGAATGTTCTCCTTTGATTC
AGACGATATTCCTTTGAAAATACAAACATTTTGCTTTGAAAATGCAAAAC
ACTTTCTTTTGAAACTCTTTTTTTAAACCCATACCGATTATCATCTTACA
GGTTACGCCACTATGATGCCGAAATCATCGGAAGTTAGTTCGGGAGCGAT
CAAAACCACAGATTGGATGAAACTTCTATGGAAGTATAAAACAACACCCA
CCTTCAACCCTCTTGATGTAAGTGATTGGATGTCCTTTTCTCTACTGACT
AACTGCTTCAAAAAGGTGTTTTTAGCCGCTTCTGATTTGTACTTGAATAA
TTATTTTATCTTTGAGTCTATAGAGATGCTAGACATTTTCCGGGTTCTTT
TGAGATGACTTGGCCTAAAAAAGTGTATAATGCGTCGGAGTCATATCCAT
TGAAGGAGAGCCTCGAGGATCTTTTCACTCTGTCTCTTTTTTTGAAAGCC
AAATAAACATCATTGTAATAAACCGATAATACTTAGCTTTGCTTGAATAA
TTTGAATGATCTCTTTGAGTCTATGAAGATGTTATACATTGTCTGGTTCT
TTTGATATAAATCTAAAATCTACATAAAATTAACATAGAAATTAACATAA
AAAAACATGCGTATTTGTAATAAAAGTAGCATGAAGGAAGTTTAGAAGTG
TGTTTTACTAGACTCGTTTCTTCCGCAACGAAGAAACTCTATAAGTCTAT
CCCTAGAATCGATATATGCTTTAAGATATATATTTGGCATAACGTACAAA
CAAGGTTGATACTCGTAGCTTGAAATGTTGTCTTCCTTCACCACTAGTTA
CATGGAAAGCGATAAGATTTAACGTGTTTTTTTTATACAATATTTGTTCA
CGCTCTATCCGTTTATATTTAGTACTGTGACATTATCGAGTAAATATTTT
TGACGATGTTTTCATTGAAAGTGGTCTTAAAGAGGATAAGTCCTTCCGGA
CTAACTTATAAGGATATTTATCATGTTTACTTCTACAAAGCGATTTTATA
AGAACTTTCATTTCTACTCCATGTTTTCCCTTTCATATAAGGAAGCTCCT
AAACAATTGTTACAATTATAAGCTACTCTTTAAAATTTGATGTTTCGAAA
TTAATTTATGGAAATTTAGTTTTAAATTTCAATACGGTCCCGTCTAAATT
TCACTTCACATCTTAAGGGCTTTTCTTGACGAAGAGGGGTGTCCAAATTG
AGTCAAAAATTGTTGATGTTGTTTTTGTTTTTGTTTACATAGATGACGTC
AGAAAACAAAAGCGTGATGGCGTTCAACTTGAGTTATATGTTCAATGAGA
AGGAACTATTGAAAGAACTTTTTACCGGGCTTTTCCAGTGGATATCCGAT
GGATCCCTCAAAGTCGCCAAAGTGACGGAGTTCTTGATGTCGGATGCGGG
TGGAGCTCATCGCGCGCTCGAGTCTGGTAGCACGGTCGGTAAATTGGTCC
TGCTAACGGAAGGAGATAAACCCATTCAGGAAATGGTAGTTGAGGAAAAT
AAAAATGAAGGAAAAAATCATGTTGAATCAGACGAAACTAAGCTACTCTG
ATGAACAATGGTAGATTTATCGTTGGCACCTTTGCCCCCGCGTTTGCGCC
TTAGTCTGCCAATAGCAAGAACCAATTTTAGCAAAATGAAGCTTTTGCAA
GACTTCCTTAAACCTGATTATCGCTGATTCGTGATTCTAAAAGACGATAG
CACACAGATTAAAAGTGGTTCTTCCACGAAAAATAAAATTTTAATTTTGA
TACACAATATATTAGTTATGAATTTTAGTTATGAATTTTAGTTTACACCT
GATTATACATATATCAAGATAATGAATTTTGTTAGTATTCCACCTATTAG
ACTTTACAAAACTCTCCTTTGCAAGATAAGAACCGCGGCACACGGCAAGG
TTTTTCAAAAAAGTAAAAATTGCAAATGGTAGATGAGGGACTAGGGTGAT
CACTTTTTATTCAATCTAAATTTGGTTCATTCCTTCTTCTTCGATTTTCG
AAAACAACACCACTGCCTTACCCATGATGAATGCCACTTTGGTAGAACAA
CTTCACATAAATTTTAGCGAAATATAATAGAGAAAATATGTAGTAATTTT
ATGTTTTCAGTTTTATAATTGTAAAAAATCTAGGCATT

Coding sequence (CDS) from alignment at sc0000073:468604..473541-

>TCONS_00007075 ID=TCONS_00007075|Name=TCONS_00007075|organism=Clytia hemisphaerica|type=CDS|length=7218bp|location=Sequence derived from alignment at sc0000073:468604..473541- (Clytia hemisphaerica)
ATGACGTCAGAAAACAAAAGCGTGATGGCGTTCAACTTGAGTTATATGTT
CAATGAGAAGGAACTATTGAAAGAACTTTTTACCGGGCTTTTCCAGTGGA
TATCCGATGGATCCCTCAAAGTCGCCAAAGTGACGGAGTTCTTGATGTCG
GATGCGGGTGGAGCTCATCGCGCGCTCGAGTCTGGTAGCACGGTCGGTAA
ATTGGTCCTGCTAACGGAAGGAGATAAACCCATTCAGGAAATGGTAGTTG
AGGAAAATAAAAATGAAGGAAAAAATCATGTTGAATCAGACGAAACTAAG
CTACTCTGAGTTACGCCACTATGATGCCGAAATCATCGGAAGTTAGTTCG
GGAGCGATCAAAACCACAGATTGGATGAAACTTCTATGGAAGTATAAAAC
AACACCCACCTTCAACCCTCTTGATGCTTGTGACGTATGGCTGTGATGAT
GTGATAGACAAGTCCACTCAAGATCTGTGGTCAACCGCAGCTGATCTTAC
AGTTAATGGTTACAAAGCTATCTTTGATGCAAATGGTGTTGAAACGCTTC
AACAAAGTTACAACAATCTTGCACGAGGAGGAAGAAATTGACAGCTCAGA
CTGTGTGGTAGTTGCAACACACGCATGTGGAGTCAATTATGCAGACTGTA
TCATTCGGTGGGGTTTGTACAAATCTGCAAAAGATCTAGTAGGCTGGCCA
ATCACACCTGGCTTCGAGTTCAGTGGTACCATTACACACGTTGGGGAGAA
TGTAACAGATTACAAGATCGGGGATAAAGTTGCTGGAGTCAGTTTATTTG
GATCTTATTCCAAAAGGCTCAAAGTGCCTGCTTACCAGGTTCGCCATGTA
CCAGAAAACATTTCCATGTCAGAAGCAGCTGGATTTCTAACAGTTGGATT
AACCGCGCATTATGCTATATTTGAGTTGTGTAAACTGCGGAAGGGTGATT
ACGTATTGGTTCACTCTGCGGCTGGTGGCGTTGGATCCATGCTGGTTCAA
ATGCTAAAGAATAAGATTGGCTGCCATGTTGTGGGTGTTGTTGGTCAAAC
ACATAAAGTGGAGATGGCAAAGCAGCTTGAAAAACAGTAGAAATAAAAGC
AAAAAAATGATCAAGATATCCACCGCAGGAGGTTATGATCAACTGGTCTA
CACTGACTTGCCAGAATGTAATTATACAGAAGGAGCAAACATTGGAATAG
AAAATGACGTCAGAAAACAAAAGCGTGATGGCGTTCAACTTGAGTTATAT
GTTCAATGAGAAGGAACTATTGAAAGAACTTTTTACCGGGCTTTTCCAGT
GGATATCCGATGGATCCCTCAAAGTCGCCAAAGTGACGGAGTTCTTGATG
TCGGATGCGGGTGGAGCTCATCGCGCGCTCGAGTCTGGTAGCACGGTCGG
TAAATTGGTCCTGCTAACGGAAGGAGATAAACCCATTCAGGAAATGGTAG
TTGAGGAAAATAAAAATGAAGGAAAAAATCATGTTGAATCAGACGAAACT
AAGCTACTCTGAGTTACGCCACTATGATGCCGAAATCATCGGAAGTTAGT
TCGGGAGCGATCAAAACCACAGATTGGATGAAACTTCTATGGAAGTATAA
AACAACACCCACCTTCAACCCTCTTGATGCTTGTGACGTATGGCTGTGAT
GATGTGATAGACAAGTCCACTCAAGATCTGTGGTCAACCGCAGCTGATCT
TACAGTTAATGGTTACAAAGCTATCTTTGATGCAAATGGTGTTGAAACGC
TTCAACAAAGTTACAACAATCTTGCACGAGGAGGAAGAAATTGACAGCTC
AGACTGTGTGGTAGTTGCAACACACGCATGTGGAGTCAATTATGCAGACT
GTATCATTCGGTGGGGTTTGTACAAATCTGCAAAAGATCTAGTAGGCTGG
CCAATCACACCTGGCTTCGAGTTCAGTGGTACCATTACACACGTTGGGGA
GAATGTAACAGATTACAAGATCGGGGATAAAGTTGCTGGAGTCAGTTTAT
TTGGATCTTATTCCAAAAGGCTCAAAGTGCCTGCTTACCAGGTTCGCCAT
GTACCAGAAAACATTTCCATGTCAGAAGCAGCTGGATTTCTAACAGTTGG
ATTAACCGCGCATTATGCTATATTTGAGTTGTGTAAACTGCGGAAGGGTG
ATTACGTATTGGTTCACTCTGCGGCTGGTGGCGTTGGATCCATGCTGGTT
CAAATGCTAAAGAATAAGATTGGCTGCCATGTTGTGGGTGTTGTTGGTCA
AACACATAAAGTGGAGATGGCAAAGCAGCTTGAAAAACAGTAGAAATAAA
AGCAAAAAAATGATCAAGATATCCACCGCAGGAGGTTATGATCAACTGGT
CTACACTGACTTGCCAGAATGTAATTATACAGAAGGAGCAAACATTGGAA
TAGAAAATGACGTCAGAAAACAAAAGCGTGATGGCGTTCAACTTGAGTTA
TATGTTCAATGAGAAGGAACTATTGAAAGAACTTTTTACCGGGCTTTTCC
AGTGGATATCCGATGGATCCCTCAAAGTCGCCAAAGTGACGGAGTTCTTG
ATGTCGGATGCGGGTGGAGCTCATCGCGCGCTCGAGTCTGGTAGCACGGT
CGGTAAATTGGTCCTGCTAACGGAAGGAGATAAACCCATTCAGGAAATGG
TAGTTGAGGAAAATAAAAATGAAGGAAAAAATCATGTTGAATCAGACGAA
ACTAAGCTACTCTGAGTTACGCCACTATGATGCCGAAATCATCGGAAGTT
AGTTCGGGAGCGATCAAAACCACAGATTGGATGAAACTTCTATGGAAGTA
TAAAACAACACCCACCTTCAACCCTCTTGATGCTTGTGACGTATGGCTGT
GATGATGTGATAGACAAGTCCACTCAAGATCTGTGGTCAACCGCAGCTGA
TCTTACAGTTAATGGTTACAAAGCTATCTTTGATGCAAATGGTGTTGAAA
CGCTTCAACAAAGTTACAACAATCTTGCACGAGGAGGAAGAAATTGACAG
CTCAGACTGTGTGGTAGTTGCAACACACGCATGTGGAGTCAATTATGCAG
ACTGTATCATTCGGTGGGGTTTGTACAAATCTGCAAAAGATCTAGTAGGC
TGGCCAATCACACCTGGCTTCGAGTTCAGTGGTACCATTACACACGTTGG
GGAGAATGTAACAGATTACAAGATCGGGGATAAAGTTGCTGGAGTCAGTT
TATTTGGATCTTATTCCAAAAGGCTCAAAGTGCCTGCTTACCAGGTTCGC
CATGTACCAGAAAACATTTCCATGTCAGAAGCAGCTGGATTTCTAACAGT
TGGATTAACCGCGCATTATGCTATATTTGAGTTGTGTAAACTGCGGAAGG
GTGATTACGTATTGGTTCACTCTGCGGCTGGTGGCGTTGGATCCATGCTG
GTTCAAATGCTAAAGAATAAGATTGGCTGCCATGTTGTGGGTGTTGTTGG
TCAAACACATAAAGTGGAGATGGCAAAGCAGCTTGAAAAACAGTAGAAAT
AAAAGCAAAAAAATGATCAAGATATCCACCGCAGGAGGTTATGATCAACT
GGTCTACACTGACTTGCCAGAATGTAATTATACAGAAGGAGCAAACATTG
GAATAGAAAATGACGTCAGAAAACAAAAGCGTGATGGCGTTCAACTTGAG
TTATATGTTCAATGAGAAGGAACTATTGAAAGAACTTTTTACCGGGCTTT
TCCAGTGGATATCCGATGGATCCCTCAAAGTCGCCAAAGTGACGGAGTTC
TTGATGTCGGATGCGGGTGGAGCTCATCGCGCGCTCGAGTCTGGTAGCAC
GGTCGGTAAATTGGTCCTGCTAACGGAAGGAGATAAACCCATTCAGGAAA
TGGTAGTTGAGGAAAATAAAAATGAAGGAAAAAATCATGTTGAATCAGAC
GAAACTAAGCTACTCTGAGTTACGCCACTATGATGCCGAAATCATCGGAA
GTTAGTTCGGGAGCGATCAAAACCACAGATTGGATGAAACTTCTATGGAA
GTATAAAACAACACCCACCTTCAACCCTCTTGATGCTTGTGACGTATGGC
TGTGATGATGTGATAGACAAGTCCACTCAAGATCTGTGGTCAACCGCAGC
TGATCTTACAGTTAATGGTTACAAAGCTATCTTTGATGCAAATGGTGTTG
AAACGCTTCAACAAAGTTACAACAATCTTGCACGAGGAGGAAGAAATTGA
CAGCTCAGACTGTGTGGTAGTTGCAACACACGCATGTGGAGTCAATTATG
CAGACTGTATCATTCGGTGGGGTTTGTACAAATCTGCAAAAGATCTAGTA
GGCTGGCCAATCACACCTGGCTTCGAGTTCAGTGGTACCATTACACACGT
TGGGGAGAATGTAACAGATTACAAGATCGGGGATAAAGTTGCTGGAGTCA
GTTTATTTGGATCTTATTCCAAAAGGCTCAAAGTGCCTGCTTACCAGGTT
CGCCATGTACCAGAAAACATTTCCATGTCAGAAGCAGCTGGATTTCTAAC
AGTTGGATTAACCGCGCATTATGCTATATTTGAGTTGTGTAAACTGCGGA
AGGGTGATTACGTATTGGTTCACTCTGCGGCTGGTGGCGTTGGATCCATG
CTGGTTCAAATGCTAAAGAATAAGATTGGCTGCCATGTTGTGGGTGTTGT
TGGTCAAACACATAAAGTGGAGATGGCAAAGCAGCTTGAAAAACAGTAGA
AATAAAAGCAAAAAAATGATCAAGATATCCACCGCAGGAGGTTATGATCA
ACTGGTCTACACTGACTTGCCAGAATGTAATTATACAGAAGGAGCAAACA
TTGGAATAGAAAATGACGTCAGAAAACAAAAGCGTGATGGCGTTCAACTT
GAGTTATATGTTCAATGAGAAGGAACTATTGAAAGAACTTTTTACCGGGC
TTTTCCAGTGGATATCCGATGGATCCCTCAAAGTCGCCAAAGTGACGGAG
TTCTTGATGTCGGATGCGGGTGGAGCTCATCGCGCGCTCGAGTCTGGTAG
CACGGTCGGTAAATTGGTCCTGCTAACGGAAGGAGATAAACCCATTCAGG
AAATGGTAGTTGAGGAAAATAAAAATGAAGGAAAAAATCATGTTGAATCA
GACGAAACTAAGCTACTCTGAGTTACGCCACTATGATGCCGAAATCATCG
GAAGTTAGTTCGGGAGCGATCAAAACCACAGATTGGATGAAACTTCTATG
GAAGTATAAAACAACACCCACCTTCAACCCTCTTGATGCTTGTGACGTAT
GGCTGTGATGATGTGATAGACAAGTCCACTCAAGATCTGTGGTCAACCGC
AGCTGATCTTACAGTTAATGGTTACAAAGCTATCTTTGATGCAAATGGTG
TTGAAACGCTTCAACAAAGTTACAACAATCTTGCACGAGGAGGAAGAAAT
TGACAGCTCAGACTGTGTGGTAGTTGCAACACACGCATGTGGAGTCAATT
ATGCAGACTGTATCATTCGGTGGGGTTTGTACAAATCTGCAAAAGATCTA
GTAGGCTGGCCAATCACACCTGGCTTCGAGTTCAGTGGTACCATTACACA
CGTTGGGGAGAATGTAACAGATTACAAGATCGGGGATAAAGTTGCTGGAG
TCAGTTTATTTGGATCTTATTCCAAAAGGCTCAAAGTGCCTGCTTACCAG
GTTCGCCATGTACCAGAAAACATTTCCATGTCAGAAGCAGCTGGATTTCT
AACAGTTGGATTAACCGCGCATTATGCTATATTTGAGTTGTGTAAACTGC
GGAAGGGTGATTACGTATTGGTTCACTCTGCGGCTGGTGGCGTTGGATCC
ATGCTGGTTCAAATGCTAAAGAATAAGATTGGCTGCCATGTTGTGGGTGT
TGTTGGTCAAACACATAAAGTGGAGATGGCAAAGCAGCTTGAAAAACAGT
AGAAATAAAAGCAAAAAAATGATCAAGATATCCACCGCAGGAGGTTATGA
TCAACTGGTCTACACTGACTTGCCAGAATGTAATTATACAGAAGGAGCAA
ACATTGGAATAGAAAATGACGTCAGAAAACAAAAGCGTGATGGCGTTCAA
CTTGAGTTATATGTTCAATGAGAAGGAACTATTGAAAGAACTTTTTACCG
GGCTTTTCCAGTGGATATCCGATGGATCCCTCAAAGTCGCCAAAGTGACG
GAGTTCTTGATGTCGGATGCGGGTGGAGCTCATCGCGCGCTCGAGTCTGG
TAGCACGGTCGGTAAATTGGTCCTGCTAACGGAAGGAGATAAACCCATTC
AGGAAATGGTAGTTGAGGAAAATAAAAATGAAGGAAAAAATCATGTTGAA
TCAGACGAAACTAAGCTACTCTGAGTTACGCCACTATGATGCCGAAATCA
TCGGAAGTTAGTTCGGGAGCGATCAAAACCACAGATTGGATGAAACTTCT
ATGGAAGTATAAAACAACACCCACCTTCAACCCTCTTGATGCTTGTGACG
TATGGCTGTGATGATGTGATAGACAAGTCCACTCAAGATCTGTGGTCAAC
CGCAGCTGATCTTACAGTTAATGGTTACAAAGCTATCTTTGATGCAAATG
GTGTTGAAACGCTTCAACAAAGTTACAACAATCTTGCACGAGGAGGAAGA
AATTGACAGCTCAGACTGTGTGGTAGTTGCAACACACGCATGTGGAGTCA
ATTATGCAGACTGTATCATTCGGTGGGGTTTGTACAAATCTGCAAAAGAT
CTAGTAGGCTGGCCAATCACACCTGGCTTCGAGTTCAGTGGTACCATTAC
ACACGTTGGGGAGAATGTAACAGATTACAAGATCGGGGATAAAGTTGCTG
GAGTCAGTTTATTTGGATCTTATTCCAAAAGGCTCAAAGTGCCTGCTTAC
CAGGTTCGCCATGTACCAGAAAACATTTCCATGTCAGAAGCAGCTGGATT
TCTAACAGTTGGATTAACCGCGCATTATGCTATATTTGAGTTGTGTAAAC
TGCGGAAGGGTGATTACGTATTGGTTCACTCTGCGGCTGGTGGCGTTGGA
TCCATGCTGGTTCAAATGCTAAAGAATAAGATTGGCTGCCATGTTGTGGG
TGTTGTTGGTCAAACACATAAAGTGGAGATGGCAAAGCAGCTTGAAAAAC
AGTAGAAATAAAAGCAAAAAAATGATCAAGATATCCACCGCAGGAGGTTA
TGATCAACTGGTCTACACTGACTTGCCAGAATGTAATTATACAGAAGGAG
CAAACATTGGAATAGAAA
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_003959XLOC_003959Clytia hemisphaericagene
The following polypeptide feature(s) derives from this transcript:
Feature NameUnique NameSpeciesType
TCONS_00007075-proteinTCONS_00007075-proteinClytia hemisphaericapolypeptide
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00007075-exon-sc0000073-1575043694:473417..473541TCONS_00007075-exon-sc0000073-1575043694:473417..473541Clytia hemisphaericaexon
TCONS_00007075-exon-sc0000073-1575043694:472535..473029TCONS_00007075-exon-sc0000073-1575043694:472535..473029Clytia hemisphaericaexon
TCONS_00007075-exon-sc0000073-1575043694:472099..472243TCONS_00007075-exon-sc0000073-1575043694:472099..472243Clytia hemisphaericaexon
TCONS_00007075-exon-sc0000073-1575043694:470980..470993TCONS_00007075-exon-sc0000073-1575043694:470980..470993Clytia hemisphaericaexon
TCONS_00007075-exon-sc0000073-1575043694:470525..470640TCONS_00007075-exon-sc0000073-1575043694:470525..470640Clytia hemisphaericaexon
TCONS_00007075-exon-sc0000073-1575043694:468604..469499TCONS_00007075-exon-sc0000073-1575043694:468604..469499Clytia hemisphaericaexon
TCONS_00007075-exon-sc0000073-1510915933:473417..473541TCONS_00007075-exon-sc0000073-1510915933:473417..473541Clytia hemisphaericaexon
TCONS_00007075-exon-sc0000073-1510915933:472535..473029TCONS_00007075-exon-sc0000073-1510915933:472535..473029Clytia hemisphaericaexon
TCONS_00007075-exon-sc0000073-1510915933:472099..472243TCONS_00007075-exon-sc0000073-1510915933:472099..472243Clytia hemisphaericaexon
TCONS_00007075-exon-sc0000073-1510915933:470980..470993TCONS_00007075-exon-sc0000073-1510915933:470980..470993Clytia hemisphaericaexon
TCONS_00007075-exon-sc0000073-1510915933:470525..470640TCONS_00007075-exon-sc0000073-1510915933:470525..470640Clytia hemisphaericaexon
TCONS_00007075-exon-sc0000073-1510915933:468604..469499TCONS_00007075-exon-sc0000073-1510915933:468604..469499Clytia hemisphaericaexon
TCONS_00007075-exon-sc0000073-1491911889:473417..473541TCONS_00007075-exon-sc0000073-1491911889:473417..473541Clytia hemisphaericaexon
TCONS_00007075-exon-sc0000073-1491911889:472535..473029TCONS_00007075-exon-sc0000073-1491911889:472535..473029Clytia hemisphaericaexon
TCONS_00007075-exon-sc0000073-1491911889:472099..472243TCONS_00007075-exon-sc0000073-1491911889:472099..472243Clytia hemisphaericaexon
TCONS_00007075-exon-sc0000073-1491911889:470980..470993TCONS_00007075-exon-sc0000073-1491911889:470980..470993Clytia hemisphaericaexon
TCONS_00007075-exon-sc0000073-1491911889:470525..470640TCONS_00007075-exon-sc0000073-1491911889:470525..470640Clytia hemisphaericaexon
TCONS_00007075-exon-sc0000073-1491911889:468604..469499TCONS_00007075-exon-sc0000073-1491911889:468604..469499Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000073supercontigsc0000073:468604..473541 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
22.12	21.2559	28.4404	28.0362	1.74766	1.37361	12.3241	13.4859	15.2517	16.903	11.1605	7.62452	13.7805	10.5829	19.6875	22.7301	23.96	23.7392	5.69033	11.2939	9.97169	11.5881	10.8885	12.3229	14.1378	17.9938	11.3216	6.68294	17.5493	10.4819
Annotated Terms
The following terms have been associated with this transcript:
Vocabulary: INTERPRO
TermDefinition
IPR020843PKS_ER
IPR013154ADH_N
IPR013149ADH_C
IPR002364Quin_OxRdtase/zeta-crystal_CS
IPR011032GroES-like
IPR016040NAD(P)-bd_dom
Vocabulary: Molecular Function
TermDefinition
GO:0016491oxidoreductase activity
GO:0008270zinc ion binding
Vocabulary: Biological Process
TermDefinition
GO:0055114oxidation-reduction process
GO Annotation
GO Assignments
This transcript is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0055114 oxidation-reduction process
molecular_function GO:0016491 oxidoreductase activity
molecular_function GO:0008270 zinc ion binding
Blast
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BLAST of TCONS_00007075 vs. Swiss-Prot (Human)
Match: VAT1 (Synaptic vesicle membrane protein VAT-1 homolog OS=Homo sapiens GN=VAT1 PE=1 SV=2)

HSP 1 Score: 143.28 bits (360), Expect = 2.674e-37
Identity = 98/323 (30.34%), Postives = 155/323 (47.99%), Query Frame = 2 
Query:  161 HACGVNYADCIIRWGLYKSAKDLVGWPITPGFEFSGTITHVGENVTDYKIGDKVAGVSLFGSYSKRLKVPAYQVRHVPENISMSEAAGFLTVGLTAHYAIFELCKLRKGDYVLVHSAAGGVGSMLVQMLKNKIGCHVVGVVGQTHKVEMAKQLGCDDVIDKSTQDLWSTAADLTVNGYKAIFDANGVETLQQSYNNLARGGRLVTYGYATMM--PKSSEVSSGAIKTTDWMKLLWKYKTTPTFNPLDMTSENKSVMAFNLSYMFNEKELLKELFTGLFQWISDGSLKVAKVTEFLMSDAGGAHRALESGSTVGKLVLLTEGDK 1123
             ACG+N+AD + R GLY     L   P+TPG E +G +  VGE V+D K GD+V  ++  G + + + VP+ Q   +PE ++  EAA  L   +TA+  +F+   L+ G  VLVH AAGGVG   VQ+ +      V G    + K E  K+ G    ID  T D       ++  G   + D  G     + YN L   G++VTYG A ++  PK + +   A+  T W +         +   L +   N++V  F+L Y+  E EL+  +   L    + G +K    + +       A + ++    VGK++L+   +K
Sbjct:   84 RACGLNFADLMARQGLYDRLPPL---PVTPGMEGAGVVIAVGEGVSDRKAGDRVMVLNRSGMWQEEVTVPSVQTFLIPEAMTFEEAAALLVNYITAYMVLFDFGNLQPGHSVLVHMAAGGVGMAAVQLCRTVENVTVFGTASAS-KHEALKENGVTHPIDYHTTDYVDEIKKISPKGVDIVMDPLGGSDTAKGYNLLKPMGKVVTYGMANLLTGPKRNLM---ALARTWWNQF--------SVTALQLLQANRAVCGFHLGYLDGEVELVSGVVARLLALYNQGHIKPHIDSVWPFEKVADAMKQMQEKKNVGKVLLVPGPEK 391
The following BLAST results are available for this feature:
BLAST of TCONS_00007075 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
VAT12.674e-3730.34Synaptic vesicle membrane protein VAT-1 homolog OS... [more]
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