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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00007040 ID=TCONS_00007040|Name=TCONS_00007040|organism=Clytia hemisphaerica|type=transcript|length=728bp
GAAATAAGGTGACACCTCTACATTTAAAACATTATAAACAAAAAACCAGT
AATTGTTGTTAAAACCTTTTTAATCGGTACCACAATATAATCATCAATAA
ATAAACTTGTCCGGAATTCGATTAACAAGACAAAAAGCGGTCATTTTTTC
ACGGACACTTTTAAagtctataaacaataaaacattACAGTATAAAATAC
AACTCAAACCTTCTTATTTACACATTTTTGTTATAtattaaaaagatttt
atgattcaaaaaatatattaactgGCAAAATAAATTTATCAGAAAAAGAC
CAGATGGTCCACGGTAGTAAATCATGATCTTCAAGATCAATAGCCAAAGC
CACAGCCAGACAAATTCAGTAGCTTGAAGGAACTATAATGCAGGTAATTT
CTTCAGTTTAATCAAGCCCACTTTTGTTACATTCACCATACTATATTCCT
AGCAAAAGGACATGTTTTCTTCGCAATAAACCTATCAACTCTTGCTTGAG
GGTTGGATGCGAGTTCGCCAGGGTCAGGTGACACCAAATGTATGAATTAG
CACAGCCCTGTAAAAGTGACCCGGTAAGATCCGCCCCGGTGGAGAACCCA
GTGAAAAACATTGCATTGGATTATTGAGTGAAcccggtcaaaatatattg
aggtTCTCTACCCcagtcaaaaatcgaaaaaatacacATTAGTGAATTTT
AGGAAAACCAGACTCGCAACTgttgaaa Run BLAST on NCBI transcript from alignment at sc0000073:394332..395136+ Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00007040 ID=TCONS_00007040|Name=TCONS_00007040|organism=Clytia hemisphaerica|type=transcript|length=805bp|location=Sequence derived from alignment at sc0000073:394332..395136+ (Clytia hemisphaerica)
GAAATAAGGTGACACCTCTACATTTAAAACATTATAAACAAAAAACCAGT
AATTGTTGTTAAAACCTTTTTAATCGGTACCACAATATAATCATCAATAA
ATAAACTTGTCCGGAATTCGATTAACAAGACAAAAAGCGGTCATTTTTTC
ACGGACACTTTTAAagtctataaacaataaaacattACAGTATAAAATAC
AACTCAAACCTTCTTATTTACACATTTTTGTTATAtattaaaaagatttt
atgattcaaaaaatatattaactgGCAAAATAAATTTATCAGAAAAAGAC
CAGATGGTCCACGGTAGTAAATCATGATCTTCAAGATCAATAGCCAAAGC
CACAGCCAGACAAATTCAGTAGCTTGAAGGAACTATAATGCAGGTAATNG
ATGATCTTAAAGATCAATAGCCAAAGCCACAGCCAGACAAATTCAGTAGC
TTGAAGGAACTATAATGCAGGTAATTTCTTCAGTTTAATCAAGCCCACTT
TTGTTACATTCACCATACTATATTCCTAGCAAAAGGACATGTTTTCTTCG
CAATAAACCTATCAACTCTTGCTTGAGGGTTGGATGCGAGTTCGCCAGGG
TCAGGTGACACCAAATGTATGAATTAGCACAGCCCTGTAAAAGTGACCCG
GTAAGATCCGCCCCGGTGGAGAACCCAGTGAAAAACATTGCATTGGATTA
TTGAGTGAAcccggtcaaaatatattgaggtTCTCTACCCcagtcaaaaa
tcgaaaaaatacacATTAGTGAATTTTAGGAAAACCAGACTCGCAACTgt
tgaaa
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00007040-exon-sc0000073-1491911889:394332..394724 | TCONS_00007040-exon-sc0000073-1491911889:394332..394724 | Clytia hemisphaerica | exon |
| TCONS_00007040-exon-sc0000073-1510915933:394332..394724 | TCONS_00007040-exon-sc0000073-1510915933:394332..394724 | Clytia hemisphaerica | exon |
| TCONS_00007040-exon-sc0000073-1575043694:394332..394724 | TCONS_00007040-exon-sc0000073-1575043694:394332..394724 | Clytia hemisphaerica | exon |
| TCONS_00007040-exon-sc0000073-1491911889:394802..395136 | TCONS_00007040-exon-sc0000073-1491911889:394802..395136 | Clytia hemisphaerica | exon |
| TCONS_00007040-exon-sc0000073-1510915933:394802..395136 | TCONS_00007040-exon-sc0000073-1510915933:394802..395136 | Clytia hemisphaerica | exon |
| TCONS_00007040-exon-sc0000073-1575043694:394802..395136 | TCONS_00007040-exon-sc0000073-1575043694:394802..395136 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000073 | supercontig | sc0000073:394332..395136 + |
Blast
The following BLAST results are available for this feature:
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