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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00007012 ID=TCONS_00007012|Name=TCONS_00007012|organism=Clytia hemisphaerica|type=transcript|length=309bp
CTACACTTGAACAATCTTGATACATTGATCTATACTGCAAAAATGAATTC
TTTTCTCGTTTTCACTTTACTTGTTGTCaccatgatgacgtcatcagttt
tcgGTCACGGTTACATGAGAAGTCCACCAGCCAGAAACAGCATGTGGAGA
TTCGGCTTCCGGCAAAATGGAGCAAATTATAATGATAATCAACTGTGGTG
TGGAGGCCGTTCAACACAAAGGAGAAACAAGGGTCGATGTGGCGTCTGTG
GAGATCCTTTCGATGCAAAAATTCAACCTCACATGGATGGAGGTCGTTTT
GGAAACCGC Run BLAST on NCBI transcript from alignment at sc0000073:99836..101086+ Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00007012 ID=TCONS_00007012|Name=TCONS_00007012|organism=Clytia hemisphaerica|type=transcript|length=1251bp|location=Sequence derived from alignment at sc0000073:99836..101086+ (Clytia hemisphaerica)
CTACACTTGAACAATCTTGATACATTGATCTATACTGCAAAAATGAATTC
TTTTCTCGTTTTCACTTTACTTGTTGTCaccatgatgacgtcatcagttt
tcgGTCACGGTTACATGAGAAGTCCACCAGCCAGAAACAGCATGTGGAGA
TTCGGCTTCCGGCAAAATGGAGCAAATTATAATGATAATCAACTGTGGTG
TGGAGGTATCCCTTTTGAATGAATTCCAtcgttttgcaatttttttatat
ataggGGTACTCTTACCCCTAGCGCACCCAAGATGAGTTTCAAAATACCT
TTATAAGTGCATCAATGATAATCGGTCCCAATGAGGCCATTCCGCTTTAC
GTCCATCAGGGGGGTGGATgaatatttccagggggtctaaaagagttttt
catttttccaggcgGTTTTTTTTCAGCAgttaaaagactgattttagttc
aactaccgtcactttaaggtatgaaaataaatttcataaagtttttttta
gcaAGTTTGTcactttccagggggtatccacacaagAAATGCTTTTTACG
TGAAAAGGTTCGTCAACCCTCCCTACATGGAAATTTAATAGAATGGTGTA
AACGCCCTTAAGTAAAGTACTGACCATTCGGTGACCCTTACTGTACTGat
tgtcaaaacaaaaaaccgattttcgtaagctttgttttctttttcaatgt
tATTAGGGTTTCAAATCCCCCTCCACTCGACGGTTGTTTCTCGATTTTAT
CGATGATATTTATTCCACTACAATCGCAATTTTCAGGCCGTTCAACACAA
AGGAGAAACAAGGGTCGATGTGGCGTCTGTGGAGATCCTTTCGATGCAAA
AATTCAACCTCACATGTAAGCACCTTTTTATGTTGTGGTTACATCTTACC
CCTGTTGATTGTCGAAAGAAACAtaggaattttttttctattctaaTCAT
ATTTTAGGAAACTTTTAATCACATTTATTTTTttcggcgagaactaattt
tggcaaatttggcgAGTTTAGACAAATTCACCAAAGTTATCTATTTTACT
CACtcataaaattttcaagattttagctcctcgccaaaattagttattTT
AATGTAGAAAGAAAGTATTGCAAGGTGGCTTTAGGAATACCATAACGAAA
ATCGCAAAATTGATTTCTACATTAAATAGAAAGAAGGAGTTTGAAATCGT
CAATTCCCGACATTTACATTTTTCAGGGATGGAGGTCGTTTTGGAAACCG
C
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00007012-exon-sc0000073-1491911889:99836..100040 | TCONS_00007012-exon-sc0000073-1491911889:99836..100040 | Clytia hemisphaerica | exon |
| TCONS_00007012-exon-sc0000073-1510915933:99836..100040 | TCONS_00007012-exon-sc0000073-1510915933:99836..100040 | Clytia hemisphaerica | exon |
| TCONS_00007012-exon-sc0000073-1575043694:99836..100040 | TCONS_00007012-exon-sc0000073-1575043694:99836..100040 | Clytia hemisphaerica | exon |
| TCONS_00007012-exon-sc0000073-1491911889:100622..100700 | TCONS_00007012-exon-sc0000073-1491911889:100622..100700 | Clytia hemisphaerica | exon |
| TCONS_00007012-exon-sc0000073-1510915933:100622..100700 | TCONS_00007012-exon-sc0000073-1510915933:100622..100700 | Clytia hemisphaerica | exon |
| TCONS_00007012-exon-sc0000073-1575043694:100622..100700 | TCONS_00007012-exon-sc0000073-1575043694:100622..100700 | Clytia hemisphaerica | exon |
| TCONS_00007012-exon-sc0000073-1491911889:101062..101086 | TCONS_00007012-exon-sc0000073-1491911889:101062..101086 | Clytia hemisphaerica | exon |
| TCONS_00007012-exon-sc0000073-1510915933:101062..101086 | TCONS_00007012-exon-sc0000073-1510915933:101062..101086 | Clytia hemisphaerica | exon |
| TCONS_00007012-exon-sc0000073-1575043694:101062..101086 | TCONS_00007012-exon-sc0000073-1575043694:101062..101086 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000073 | supercontig | sc0000073:99836..101086 + |
Blast
The following BLAST results are available for this feature:
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