TCONS_00007003 (transcript) - C. hemisphaerica

Overview
NameTCONS_00007003
Unique NameTCONS_00007003
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length2027

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00007003 ID=TCONS_00007003|Name=TCONS_00007003|organism=Clytia hemisphaerica|type=transcript|length=2027bp
tgGAGGAATTGCATCAGTAGATGGATATCAATGGGTTGGTTATCGGAATG
CAAAATCCTTCCCAAGTGGAAATTTCCCTCTGCGCTGTCGTAATcTTAAA
AAGTTATGTTGCTTTCAATTCAAAGGAGCCACTTTCTTTGATGCTGCTTA
TTTGGTCGGTGGTTGGACCACAGCTGAATGGCTAGGCATTATGGGAAAAT
TTTATGATGCTGATGTTGAGAAATCACTTGGTCATTACCGTGAATTTCCC
ATCAATGATATTTTTACGgtTGGTCCTGAGTATGGTATGATTTACGATGC
GTTGAAGACCAAAATTTACGCCATGGAGAATATCATGAAACGAAATGGAA
CGATTAGTGGTACTACCCTTTCGAAAGAAATTCGTGAAAATACCAACTTT
ACTGGCTTGACAATGCTAGTAGAATTGGATAAACAAACTGGAATGCGTCT
ACATTTTAATGGTTACGCAAGTGTCAACTGGCCCAACTCCGATTTCTTTC
AGTCTCAACACGTTATTGAATTGTTGACTGGTCGTCTACAAAAATGGGAT
TATTCAAACTTAGGTGTTTTATACGTCAACACTCTTTTCAAAGTAGAAGG
TTCTTCTTATGAATACGAACTGAAAGCAGACGGTGGTAAATCTCACAGGA
AAAGAATTGATTTGTACAATGATATTGACAGTGTGGTTGGTTATATCCAG
GttgataaaaaattcaagaaCAAAAGAAGTTATACGAAAGGAAAAGGACT
GTTTGGTTTTGAACTACAAAAACAAATCAATGAAAATTACGACAACTCAG
TACCGAATCAAGTGATTCCTTTGGAGATGGAACAAGCTGTGGAATATGTT
CCAGCGCCTTACTATTGTACCGATGGCTGCGGTGGCAACATTACTGATCC
TTCAAACATCAATGTTTATTCGAATGGTGTCTGTATCAAACAAAATGTCT
GCAAATGTAATGTCGGATCAAATGGCGAAAATTTATGGACTGGTCCCACA
TGTGCTATAGCTCAATGTCCCGATGGATGCTTCAAAGGCTCCTGTACCGC
cCCGAAGACATGTACTTGTATCAATGGTTGGTCAGGAATTGATTGTAATA
CTGCAGTATGCTCCTCATGTTCGTCGACCGGTGGCAATTGTATTTCTCCA
GAAGTTTGTGTTTGCAAACCTGGACAATTTGGCCCATCTTGTGAACAGAA
ATGCACCTGTGAAAACGGCATATGTAACGGAGGACAAACAGGAGATGGTA
CTTGTCAATCGTGTGATTCCGGATACACTGGCACAAATTGTGAGATCgat
ttggttgttttggtggTTCCTCTCGTCTTTGGTGTTGGAGCACTAGCTTG
TCTTCTCTACTTTTTGGTCCAATATTTCATTGCTCAAACACGATTGAAAG
CAGCGTTGTACAATAATGATTGGATAGTCAATTGGCCAGATGTTACACGA
GATGATGGAAACACTGGAAGAAGTTCCATGTTTATTTCTGCCATGTCCAT
GAATAACAACAACAGAAAAGAAAGaaaacaaATTAATACCGGTACTTGGG
ATGGTATTGATATTCACTACCAAACACTTGACAAAGATTCCATTGCTCTT
ACCGACGCCCTTCGACTTGAAGTCAAACAAATGCGTGATATGAGACATAC
TAATATCTGTCTTTTTGTTGGTTCGTGCATTGATAGTCCCAATGTTTCCA
TCTTAACTGAATTGCAACCTAAAGGTTCTTTGGATGACGTTCTAACCAAT
GAAGATATTAAGCTTCCATGGAATTTCCGATTCGCTATTTTGAAGGGAAT
TGTAGCTGGTCTAGATTTCATTCACAGAAGTGAAATCAGAAGTCATGGTC
GATTGAAAACCAGTAATTGTTTAATCGATAACAGATGGACCGTTAAACTG
TCAGGCTTTGGTTTACACCATTTAAAGTCGAACCAAAAGAATGTGGGTCA
TTTCAATCCCCACGAGATGTCAACCACTACTGTTGACGATGCAAAAGCTA
ACTACGgCTCATTGATTTGGACGGCAC
Run BLAST on NCBI

transcript from alignment at sc0000073:34448..44300+

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00007003 ID=TCONS_00007003|Name=TCONS_00007003|organism=Clytia hemisphaerica|type=transcript|length=9853bp|location=Sequence derived from alignment at sc0000073:34448..44300+ (Clytia hemisphaerica)
tgGAGGAATTGCATCAGTAGATGGATATCAATGGGTTGGTTATCGGAATG
CAAAATCCTTCCCAAGTGGAAATTTCCCTCTGCGCTGTCGTAATGTAAGA
TATTTTAATTACAAAGTGTTTTTCTCTCGCCTCTTTCCTTAATTCTTACC
CCCCCCATCATCTCGCGCATCTGTGAGCTTTTGGTTGCTGAGGTGAAATC
AAGAATGAAATCACTTTTTATGTTTTCTAATCTTTCACTTTCCGACATTT
AACATTATTATAGCTTTCTACTAAGTTTTGTTGTAAAATTGAGAGCTATT
GAGATGTGAATCATCCGACATTTAACATTATTATAGCTTTCTACTAAGTT
TTGTTGTAAAATTGAGAGCTATTGAGATGtgaatttattgatttttgtac
acaatttatcttttttttcagcTTAAAAAGTTATGTTGCTTTCAATTCAA
AGGAGCCACTTTCTTTGATGCTGCTTATTTGGTCGGTGGTTGGACCACAG
CTGAATGGCTAGGCATTATGGGAAAATTTTATGATGCTGATGTTGAGAAA
TCACTTGGTCATTACCGTGAATTTCCCATCAATGATATTTTTACGGTATG
TGTGTTTGTTTTCCTAAATTAAAGGCCACCTTTTTTAAATAACGTAGTCA
GCGTTTGGTTTACTTTGAATGCTCTACTTGGTATACAATTAATAAATAAt
ccttttgaattttgtttaatGATGCGTTGATGATGCGTTGTAGCTAATCA
AGCAATTTTTGTGGGGAATAGTTTCacgttttgaaatatttggaaaaGAT
GTGTGTTCGTGTGTTCTGATTTTCTTGGTTTAGAACCGCAAAACAAAAGA
TTACTGAAATTACTCTANAATGCAAAATCCTTCCCAAGTGGAAATTTCCC
TCTGCGCTGTCGTAATGTAAGATATTTTAATTACAAAGTGTTTTTCTCTC
GCCTCTTTCCTTAATTCTTACCCCCCCCATCATCTCGCGCATCTGTGAGC
TTTTGGTTGCTGAGGTGAAATCAAGAATGAAATCACTTTTTATGTTTTCT
AATCTTTCACTTTCCGACATTTAACATTATTATAGCTTTCTACTAAGTTT
TGTTGTAAAATTGAGAGCTATTGAGATGTGAATCATCCGACATTTAACAT
TATTATAGCTTTCTACTAAGTTTTGTTGTAAAATTGAGAGCTATTGAGAT
GTGAATCATCCGACATTTAACATTATTATAGCTTTCTACTAAGTTTTGTT
GTAAAATTGAGAGCTATTGAGATGTGAATCATCCGACATTTAACATTATT
ATAGCTTTCTACTAAGTTTTGTTGTAAAATTGAGAGCTATTGAGATGTGA
ATCATCCGACATTTAACATTATTATAGCTTTCTACTAAGTTTTGTTGTAA
AATTGAGAGCTATTGAGATGtgaatttattgatttttgtacacaatttat
cttttttttcagcTTAAAAAGTTATGTTGCTTTCAATTCAAAGGAGCCAC
TTTCTTTGATGCTGCTTATTTGGTCGGTGGTTGGACCACAGCTGAATGGC
TAGGCATTATGGGAAAATTTTATGATGCTGATGTTGAGAAATCACTTGGT
CATTACCGTGAATTTCCCATCAATGATATTTTTACGGTATGTGTGTTTGT
TTTCCTAAATTAAAGGCCACCTTTTTTAAATAACGTAGTCAGCGTTTGGT
TTACTTTGAATGCTCTACTTGGTATACAATTAATAAATAAtccttttgaa
ttttgtttaatGATGCGTTGATGATGCGTTGTAGCTAATCAAGCAATTTT
TGTGGGGAATATTTTCacgttttgaaatatttggaaaaGATAAGTGTTCG
TGTGTTCTGGTTTTCTTGTTTTAGAACCGCAAAACAAAAGATTACTGAAA
TTActctaaaattacatttttttctttaggtTGGTCCTGAGTATGGTATG
ATTTACGATGCGTTGAAGACCAAAATTTACGCCATGGAGAATATCATGAA
ACGAAATGGAACGATTAGTGGTACTACCCTTTCGAAAGAAATTCGTGAAA
ATGTATGTAGAGCTATTTTCCCCTTTTAATACGTTCTACCAAAACTGTCT
TGCCTCGTGAACCTTATTTTTCAATTGAAGTCCAGTTTCTTTTATGGTTT
ATATCAATCAAAACCAtaatcaaatttgaatatatatttttatatgacTT
TAATTGCATTCCATCTCTAAAAACCTGTTaatttattttggttttattcA
GACCAACTTTACTGGCTTGACAATGCTAGTAGAATTGGATAAACAAACTG
GAATGCGTCTACATTTTAATGGTAAGTAAGAACCTCCTCGACTTCGCAGT
GTCATGTAATTAACTACTGGACAATGATTCTGTATTGACTATTACTACAT
CCATTCTTATCGAAATACATTATACCCTACATGAATTGACATCTTTGACA
ATTTTGACACCGCTACCCGATGACGTCAAAATccttgaaaatgttgaaaa
cggGACCCCTTCTAACTTTCGCATTCATCTTTTCTACTCAAATTTCGAAG
GCAACTTTTGGTGACATGTTCACATCTTTTGGATCCATTTTTTCCACCTG
CCGGTATTGTGTATTATATTGTTATGAGTTAATTCCCAAGCTTTTTTAAA
TTAGGCTCTTAATTGAACTTCCTTTTTTTATAGGTTACGCAAGTGTCAAC
TGGCCCAACTCCGATTTCTTTCAGTCTCAACACGTTATTGAATTGTTGAC
TGGTCGTCTACAAAAATGGGATTATTCAAACTTAGGTGTAAGTGATACaa
tgatctttgttttgatagatttctcCTACTAACAtttataaaaagtttga
aacgaTAGTCACTGCTATACATAAAATCTCTTATATAAATGCTTCTTTCC
CCTTCTGGTTATACGCGCTACCGTGTGACAAAATCGTTGAATACCATGAA
TGTTTTTCTGTATACCTGGAAAATATTTGAACCTTTTCCCTGTCTGGCAA
GCTAAGGGACATTTATTTGTATAAAGTTGATGTTTTGTATTACAGGTTTT
ATACGTCAACACTCTTTTCAAAGTAGAAGGTTCTTCTTATGAATACGAAC
TGAAAGCAGACGGTGGTAAATCTCACAGGAAAAGAATTGATTTGTACAAT
GATATTGACAGTGTGGTTGGTTATATCCAGGttgataaaaaattcaagaa
CAAAAGAAGGTAGCTTCATACTTATTGACCGTATAAATTAATCCTCTCTG
GATTTAGTTTTGCACTCAGCGTACCATTGTTATAATTGTTTTGTAGTTCG
CTAAGTTTCGTAGATCAGGAAGGTGTTTTATCCATGTGCGAGCTCTTCTT
TCTATAATAATAAATATCCAGACCTACAATTATGTTAAATGGAATAATCT
GGGAATTGTACAGATATATTTTTCGTCTGCTGGATTATTTTATTGCTTTC
CCAAACTACTATCATTCGTTTTCATCGTTTCCTTCTCAGTTATACGAAAG
GAAAAGGACTGTTTGGTTTTGAACTACAAAAACAAATCAATGAAAATTAC
GACAACTCAGTACCGAATCAAGTGATTCCTTTGGAGATGGAACAAGCTGT
GGAATATGTTCCAGCGCCTTACTATTGTACCGATGGCTGCGGTGGCAACA
TTACTGATCCTTCAAACATCAATGTTTATTCGAATGGTGTCTGTATCAAA
CAAAATGTCTGCAAGTATGTTTTGGAACGAATTTTTAAGaactttataag
atgcttttaACGATAGGACTTTAAgatctttaaaattaaaaacactTTAA
AGAAGGTTTTTGGTGCAAAATCTTATTCTATATTTGACATTGTATCATTT
TAGATGTAATGTCGGATCAAATGGCGAAAATTTATGGACTGGTCCCACAT
GTGCTATAGCTCAATGTCCCGATGGATGCTTCAAAGGCTCCTGTACCGCG
TAAGCTTTAAGTGTTTTGTAGATGAAGAGCTAAACCTTGAACgtcaaatt
ttaatgttttattcTTTGTTTTTGGCTCATcgtataccgtattacttcga
ataacagCCCCTCCCTTGAGAGAAATTTATCAATAAACGTCCTGTCAAAT
AAACGCTCCTTTCGAATAAATGCCTCCCCTTTGGGAGAGGCGCTTATTTG
AAACAAGTAATTAGGGAGAATTATATGAAGGAAAACATAATTATGTCTTA
ATGATTGTATTCTTTCAGTCTTTCAGTattcaaactaattttgacccatt
tttacACCActaaaaataacatatttgaattgaaagaaagtgaaaaggtC
AAATAAGTTTTCCATTTACTTAATTAAAATGACCTTgcttaaagattttc
aaataaacgcccccttctttttaaCACCCCTCGAATAAACCGAAGTAATA
TGGTATGTCTGGCTATAAACTTGTCAACCCTTAGTGGCGCGGTCAGCCTT
TGAGGAAACTGGTACTGATTCATgggaaatttcttttgaaaacgcTAGCA
TACTACCGTGTAGTTTGTCGGTTAAGTTGATACCAGCTTCAGTTTGTAAA
ATAAggatttgtttttctctttcagcCCGAAGACATGTACTTGTATCAAT
GGTTGGTCAGGAATTGATTGTAATACTGCAGTATGCTCCTCGTAAGTTTC
CCAAATGTTTCTCAAGACCACTAATGAAAACATTAACTGTAAACTGAAAT
TACTTTAATCgaattaactttcgcgagattaaatttcgcaatttcgcgaa
tttttgcctttttcggTAAACTAAAACTCGCGGaaacgcgtgagattcct
gactcgcgaaattaaatccacaacaaaaatttttaaattcgcATTTTCGG
TGGAGAAACCACTCCAAAATCTCCATCtatggcaaaaaatggctattgTT
TAGCTGCTTtcaggcttattcgcgaaattaaatccatgcgaaatttttca
aaactttgactcgcgaaatttttcaaaactttgactcgcgaaatttaatc
cgattaaagtaaatTGTTATCCAATATCTTTCAATatatttttcgcaaat
ttttctGCAAAGTTCCAGCACCAAAACCCTTTTAGAAAATCAATTTATTA
ATGTTTCATATTTGCCTTACCTTTGTAAGCCCGGGGCCACTTTTCGATAG
TCTGGATGCCGCTGATAAGTGGCTCGGTGTAAATATGTCAGAAATCTATA
CCTCTAATTTAGAAATCTTTAGAtactttttttgaagattttatccCTCG
TAATCAGTAtaggaaaatttaagaaattctCATTTTCATGTTCTTTACAG
ATGTTCGTCGACCGGTGGCAATTGTATTTCTCCAGAAGTTTGTGTTTGCA
AACCTGGACAATTTGGCCCATCTTGTGAACAGAAATGCACCTGTGAAAAC
GGCATATGTAACGGAGGTACAAAACATTAGTGTAGAGCTTCCTGTCGAAG
CATTAATTTAGATAAAGTTTTATTGTAACACTCTGTTAGTATATAAAGTT
ACTTGGGAcgaattttaaagctttaaagggacataacagtacttgcgaaa
tttgtaaacaaactgtatgcagcggatacaaatcaaaacaaatgtcacat
gtcaaaataaaaaatcaaaccaaatatggccaattttgattgtttaattg
ttttacaagtttgttttggacacgtgattttaattgttctctttaatgac
acgtgattcgcgcaatgtttacattttactacttttattcCCCTTTAAAA
ATGGTATTTATGTGATATAATTTACAATAATCTTTCCATTTCATTTCACG
TGACCAGGACAAACAGGAGATGGTACTTGTCAATCGTGTGATTCCGGATA
CACTGGCACAAATTGTGAGATCgatttggttgttttggtggTTCCTCTCG
TCTTTGGTGTTGGAGCACTAGCTTGTCTTCTCTACTTTTTGGTCCAATAT
TTCATTGCTCAGTAAGTGTATCATTTGTATCACTGTTTGAGGTGTTTGTT
TGAGGTGGTTAACAGAGCACCACATGGCGGTAAAACTAGACTGCTTTTTT
TGGATCATCAGACGATTCTATAGTACAGGTTATTAAAAAAGTAATTATCT
AAGCCTCGGGAAGATTTCCTATTTGTGCAAGTAAACAAAACAGGGCCAGG
GTCTCCCCTACCAATCGTTTGAAGGACTGATTAAAATTGGCGCAGTGATG
CATTCACAGCATCGATGTTCACAACTACTCAAAAATATCTCAGGACCAAA
GTGAAAGAGGATTTTGATTAACTGCTTTATTTAATATCAATAATACAAAA
ATTCGGTTATCCACCTTGTCTCTAGAACACGATTGAAAGCAGCGTTGTAC
AATAATGATTGGATAGTCAATTGGCCAGATGTTACACGAGATGATGGAAA
CACTGGAAGAAGTTCCATGTTTATTTCTGCCATGTCCATGAATAACAACA
ACAGAAAAGAAAGGTGTGCATTCTCATTACAGAGATTCCGGTGTCTGTTT
AGACGTATTTATTCATAAGTTTATGTTCCTGCAGCTAACCATATGCTAAT
TGCTTGTTTGTAAAGGCAATACCGTTAAATATTGATTTGAGCTTTTTCCA
CATACTTGTTTGTTCTATAGAAATTCAAACTGATATCCAATTCATCATGT
CATCCAGTACCTCTtaaatttctaataaaaatgagcatttttttttctag
aaaacaaATTAATACCGGTACTTGGGATGGTATTGATATTCACTACCAAA
CACTTGACAAAGATTCCATTGCTCTTACCGACGCCCTTCGACTTGAAGTC
AAACAAATGCGTGATATGAGACATACTAATATCTGTCTTTTTGTTGGTTC
GTGCATTGATAGTCCCAATGTTTCCATCTTAACTGAATTGCAACCTAAAG
GTTCTTTGGATGACGTTCTAACCAATGAAGATATTAAGCTTCCATGGAAT
TTCCGATTCGCTATTTTGAAGGTATGTGTATTAGCCCCTAAGCTactgtt
ttcaatcaaaaaaagtCTTCAATCAATGAGATCGGTGATTGTTATTGAAC
TGATGAAGAATCGATTCTTCTCTTTTGTTCCCTTGATTTCTTCTTGGAGG
GAATTCGGCAAGAATAAAACTTCTTAATGTCTTTATCTTTCATCATGTAA
ACCAGTGCGTTCAAACCAGAACATAGAAAAACTGGTAGGTGGAAGAATGC
AAATAGATTGTGAGCAGACTCTAATATTTTCTCATTACCTTCATAAGTCA
AAAGTAGTCCGCCAAGCAATAAGTAATACAAGCTCAATGGGCCCGTGCAT
AAATTATAAActaaagataaaaaattcaGGACTCCAACAGTCTTTTGATT
ACGGATCATTCTTACTTTGTCAGCTTCGTTTCCATGACGCTCTTTTGATA
CTTGATTTGTTAAAACATTTTTGGACCAAAGATTTAAAACAGTGCTGGCT
ATAACTCCGATGGAAAGTAAACTTCCAACAGACAACCAATAATAACAATA
GAGCGTATGTGATGTATATCTTGGATTATACGTGAGAAAGGTCATGGTAG
CGGTTAATAAAGATACGCCATTCCAAACAACGAGTATACCATAGATGGTC
CTGGTCTTTACCTCATAGAATGGTTTCCTTATTGCAATATGTCGTAGGGC
TGAAATGACAACAAAAGTACAGAGGCCTGTACCACCTGTGTATACTGATA
TAGCCATACTGATACTCTGAGCCACGCAAAAAtcaattgaagaaaaaagt
gtaacAGGCATGTATCCCAGATATAATACACCAGTAAGGCCGTCGGTCAA
TGACAAATAAATGTAGATCTTTTGTGATAGAGTTAAATGTTTGTTCGTCT
TTTTCAAACCAACTATCAAAGCTACATTTGTGAGTATCAAGAATATAGAT
GAAATGAGAAGGAAGAGTACTTCACGATAAACCATCGATTCGTTTCTAGT
CGACGTTGGTTTGTTGTTCGTGAGGTTGTGAACGAAAGGAATACAAGATT
CCATCTCTGGATGttatcgaaaaaaattgaacaggaataatattttctaa
ttttccaaatctttgaatACTATTGGTTCTaaaataatgcaaaaaaaaga
cataattCTCTCAAAAATTGTCAAGAGAAAAGGGTAGAAATGTCACATGA
CCAAAATATCAATGtctaacgatgtagtaatctgAAAAAATGCGACACGT
ACGCGGGGAAACAAActttcgaaaaaagaaaaaccaaaactcgatgattt
tgatttaaaaaagatattatTATTTCTAACGCTGGTCCAATAATTCTGAC
CATACACCTATCTACTATCAACCCTTTTGAAGAAGCCAGTAAGGGTTGTT
TGCGATACCGTCGTCAAAAAGTGTTTTCCAAGTAAACCCGTTGCAAGTCT
CTACCCAAGCTGACCGTGCCGTCAGAGGTGATAAGTGTGtcacaaaaaaa
gtttatttgttTACTCCTTGCCAAGATCCCTGAAAATATTGGACTGTGAT
CGTTCAGcgaatttaaacaataaagtTAACGTTAAAAAGGAAACACTCGA
AGCAGCTCGAAGATATAAAACTGGGAAAAGTAGCGTATAAGTAGTGAAAC
TAATTCCAATTAACGAATTTTTTGCGACTTATGTATGAAATCGCCAAAAg
ctttttataataaaaaatgattaaaattaaaattaatttaacaaaaaaat
attatctgTGATTCGGGTGTTATTTTTAGATAAATTATCATAGGAAGATA
AAAGAAGGGTCTAAGAAATACACAAATGAAAATAATCATAGCATAATAAT
AGAATGATGAATATTTTGGTGAACGTTCATAGGTCTCTAAGATATTGTCT
CGTTCACTGAAGTACAACGAGAAAGATTTTTCCCAtgtgaaaataattat
aaagcatcttaaagaggaaaaaattccGTGCACAAAATTATTCAGATACA
AAAATTGACATAAACAACCTACCAGCGGAAATTTTCGTCGGCCTATCAAT
CCTTCCATTATCTGCATAAAGTCGGGTGGGTTTTTCTGAAGGTTTCATCA
GCAACCATTCCACACGTTTGGAATCCAGCCTTTAAGTGATGACATTTACT
GTTTTTTTGTGTTTAGGGAATTGTAGCTGGTCTAGATTTCATTCACAGAA
GTGAAATCAGAAGTCATGGTCGATTGAAAACCAGTAATTGTTTAATCGAT
AACAGATGGACCGTTAAACTGTCAGGTGCGATACGTAgtatttaatttaa
attttgtttctaTGATTTTTGCAGGCGCTTCATCTTTTCGTTCCCGTTTT
TGGGCTTGTAAAGACTGCTTAGTTTTTTATGTAATGTTTGACATGAAAAT
TGAGAAGAAGCTGATGTCAATGATATGAGGTTGAAATTTTATGGTACCAT
CTCACAGGGAATAATTTTGTGCGTGATTCTTCTTGTACTTTATGGGTCCC
ACGTGGTGCAACCGAGTCTTTCATACAGGGATGTATTCCTTTAGattgga
aaacaaaatcaaacgctggtgttgtgatatttttttcgtttttgtgATGT
TGTATGCTTCCTTTTCAGGCTTTGGTTTACACCATTTAAAGTCGAACCAA
AAGAATGTGGGTCATTTCAATCCCCACGAGATGTCAACCACTACTGTTGA
CGATGCAAAAGCTAACTACGggtataaaaaacatttttcagggGAATTAG
TCCCAATGACAATTATTCTGATACAATTAACTTTCACTGAAAGAAAGAAG
ATCTAGATCCAGCCCCGGGTAGAATCTTTTCATTGTTCTTCTTCAGACTT
GGGGTCCTAAACATACGGTTGTATTTGTTTTAGCTCATTGATTTGGACGG
CAC
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_003921XLOC_003921Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00007003-exon-sc0000073-1491911889:34448..34541TCONS_00007003-exon-sc0000073-1491911889:34448..34541Clytia hemisphaericaexon
TCONS_00007003-exon-sc0000073-1510915933:34448..34541TCONS_00007003-exon-sc0000073-1510915933:34448..34541Clytia hemisphaericaexon
TCONS_00007003-exon-sc0000073-1575043694:34448..34541TCONS_00007003-exon-sc0000073-1575043694:34448..34541Clytia hemisphaericaexon
TCONS_00007003-exon-sc0000073-1491911889:35910..36083TCONS_00007003-exon-sc0000073-1491911889:35910..36083Clytia hemisphaericaexon
TCONS_00007003-exon-sc0000073-1510915933:35910..36083TCONS_00007003-exon-sc0000073-1510915933:35910..36083Clytia hemisphaericaexon
TCONS_00007003-exon-sc0000073-1575043694:35910..36083TCONS_00007003-exon-sc0000073-1575043694:35910..36083Clytia hemisphaericaexon
TCONS_00007003-exon-sc0000073-1491911889:36377..36499TCONS_00007003-exon-sc0000073-1491911889:36377..36499Clytia hemisphaericaexon
TCONS_00007003-exon-sc0000073-1510915933:36377..36499TCONS_00007003-exon-sc0000073-1510915933:36377..36499Clytia hemisphaericaexon
TCONS_00007003-exon-sc0000073-1575043694:36377..36499TCONS_00007003-exon-sc0000073-1575043694:36377..36499Clytia hemisphaericaexon
TCONS_00007003-exon-sc0000073-1491911889:36699..36768TCONS_00007003-exon-sc0000073-1491911889:36699..36768Clytia hemisphaericaexon
TCONS_00007003-exon-sc0000073-1510915933:36699..36768TCONS_00007003-exon-sc0000073-1510915933:36699..36768Clytia hemisphaericaexon
TCONS_00007003-exon-sc0000073-1575043694:36699..36768TCONS_00007003-exon-sc0000073-1575043694:36699..36768Clytia hemisphaericaexon
TCONS_00007003-exon-sc0000073-1491911889:37131..37234TCONS_00007003-exon-sc0000073-1491911889:37131..37234Clytia hemisphaericaexon
TCONS_00007003-exon-sc0000073-1510915933:37131..37234TCONS_00007003-exon-sc0000073-1510915933:37131..37234Clytia hemisphaericaexon
TCONS_00007003-exon-sc0000073-1575043694:37131..37234TCONS_00007003-exon-sc0000073-1575043694:37131..37234Clytia hemisphaericaexon
TCONS_00007003-exon-sc0000073-1491911889:37493..37656TCONS_00007003-exon-sc0000073-1491911889:37493..37656Clytia hemisphaericaexon
TCONS_00007003-exon-sc0000073-1510915933:37493..37656TCONS_00007003-exon-sc0000073-1510915933:37493..37656Clytia hemisphaericaexon
TCONS_00007003-exon-sc0000073-1575043694:37493..37656TCONS_00007003-exon-sc0000073-1575043694:37493..37656Clytia hemisphaericaexon
TCONS_00007003-exon-sc0000073-1491911889:37937..38161TCONS_00007003-exon-sc0000073-1491911889:37937..38161Clytia hemisphaericaexon
TCONS_00007003-exon-sc0000073-1510915933:37937..38161TCONS_00007003-exon-sc0000073-1510915933:37937..38161Clytia hemisphaericaexon
TCONS_00007003-exon-sc0000073-1575043694:37937..38161TCONS_00007003-exon-sc0000073-1575043694:37937..38161Clytia hemisphaericaexon
TCONS_00007003-exon-sc0000073-1491911889:38301..38396TCONS_00007003-exon-sc0000073-1491911889:38301..38396Clytia hemisphaericaexon
TCONS_00007003-exon-sc0000073-1510915933:38301..38396TCONS_00007003-exon-sc0000073-1510915933:38301..38396Clytia hemisphaericaexon
TCONS_00007003-exon-sc0000073-1575043694:38301..38396TCONS_00007003-exon-sc0000073-1575043694:38301..38396Clytia hemisphaericaexon
TCONS_00007003-exon-sc0000073-1491911889:39023..39088TCONS_00007003-exon-sc0000073-1491911889:39023..39088Clytia hemisphaericaexon
TCONS_00007003-exon-sc0000073-1510915933:39023..39088TCONS_00007003-exon-sc0000073-1510915933:39023..39088Clytia hemisphaericaexon
TCONS_00007003-exon-sc0000073-1575043694:39023..39088TCONS_00007003-exon-sc0000073-1575043694:39023..39088Clytia hemisphaericaexon
TCONS_00007003-exon-sc0000073-1491911889:39748..39863TCONS_00007003-exon-sc0000073-1491911889:39748..39863Clytia hemisphaericaexon
TCONS_00007003-exon-sc0000073-1510915933:39748..39863TCONS_00007003-exon-sc0000073-1510915933:39748..39863Clytia hemisphaericaexon
TCONS_00007003-exon-sc0000073-1575043694:39748..39863TCONS_00007003-exon-sc0000073-1575043694:39748..39863Clytia hemisphaericaexon
TCONS_00007003-exon-sc0000073-1491911889:40255..40408TCONS_00007003-exon-sc0000073-1491911889:40255..40408Clytia hemisphaericaexon
TCONS_00007003-exon-sc0000073-1510915933:40255..40408TCONS_00007003-exon-sc0000073-1510915933:40255..40408Clytia hemisphaericaexon
TCONS_00007003-exon-sc0000073-1575043694:40255..40408TCONS_00007003-exon-sc0000073-1575043694:40255..40408Clytia hemisphaericaexon
TCONS_00007003-exon-sc0000073-1491911889:40773..40910TCONS_00007003-exon-sc0000073-1491911889:40773..40910Clytia hemisphaericaexon
TCONS_00007003-exon-sc0000073-1510915933:40773..40910TCONS_00007003-exon-sc0000073-1510915933:40773..40910Clytia hemisphaericaexon
TCONS_00007003-exon-sc0000073-1575043694:40773..40910TCONS_00007003-exon-sc0000073-1575043694:40773..40910Clytia hemisphaericaexon
TCONS_00007003-exon-sc0000073-1491911889:41148..41418TCONS_00007003-exon-sc0000073-1491911889:41148..41418Clytia hemisphaericaexon
TCONS_00007003-exon-sc0000073-1510915933:41148..41418TCONS_00007003-exon-sc0000073-1510915933:41148..41418Clytia hemisphaericaexon
TCONS_00007003-exon-sc0000073-1575043694:41148..41418TCONS_00007003-exon-sc0000073-1575043694:41148..41418Clytia hemisphaericaexon
TCONS_00007003-exon-sc0000073-1491911889:43564..43672TCONS_00007003-exon-sc0000073-1491911889:43564..43672Clytia hemisphaericaexon
TCONS_00007003-exon-sc0000073-1510915933:43564..43672TCONS_00007003-exon-sc0000073-1510915933:43564..43672Clytia hemisphaericaexon
TCONS_00007003-exon-sc0000073-1575043694:43564..43672TCONS_00007003-exon-sc0000073-1575043694:43564..43672Clytia hemisphaericaexon
TCONS_00007003-exon-sc0000073-1491911889:44016..44118TCONS_00007003-exon-sc0000073-1491911889:44016..44118Clytia hemisphaericaexon
TCONS_00007003-exon-sc0000073-1510915933:44016..44118TCONS_00007003-exon-sc0000073-1510915933:44016..44118Clytia hemisphaericaexon
TCONS_00007003-exon-sc0000073-1575043694:44016..44118TCONS_00007003-exon-sc0000073-1575043694:44016..44118Clytia hemisphaericaexon
TCONS_00007003-exon-sc0000073-1491911889:44281..44300TCONS_00007003-exon-sc0000073-1491911889:44281..44300Clytia hemisphaericaexon
TCONS_00007003-exon-sc0000073-1510915933:44281..44300TCONS_00007003-exon-sc0000073-1510915933:44281..44300Clytia hemisphaericaexon
TCONS_00007003-exon-sc0000073-1575043694:44281..44300TCONS_00007003-exon-sc0000073-1575043694:44281..44300Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000073supercontigsc0000073:34448..44300 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
Sort Descending | Sort Ascending | Only Non-Zero Values | Tile/Chart | Reset | Show/Hide Values

Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	314.733	183.234	0	0	0	0
Blast
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BLAST of TCONS_00007003 vs. Swiss-Prot (Human)
Match: ANPRB (Atrial natriuretic peptide receptor 2 OS=Homo sapiens GN=NPR2 PE=1 SV=1)

HSP 1 Score: 129.798 bits (325), Expect = 5.861e-31
Identity = 63/164 (38.41%), Postives = 100/164 (60.98%), Query Frame = 2 
Query: 1535 NTGTWDGIDIHYQTLDKDSIALTDALRLEVKQMRDMRHTNICLFVGSCIDSPNVSILTELQPKGSLDDVLTNEDIKLPWNFRFAILKGIVAGLDFIHRSEIRSHGRLKTSNCLIDNRWTVKLSGFGLHHLKSNQKNVGHFNPHEMSTTTVDDAKANYGSLIWTA 2026
            NTG + G  +  + ++K  I LT  +  E+K MRD++  ++  F+G+CID PN+ I+TE  P+GSL D+L N+ I L W FR++++  +V G+ F+H S I SHG LK+SNC++D+R+ +K++ +GL   +              ST   DD+ A Y   +WTA
Sbjct:  539 NTGHFKGNVVAIKHVNKKRIELTRQVLFELKHMRDVQFNHLTRFIGACIDPPNICIVTEYCPRGSLQDILENDSINLDWMFRYSLINDLVKGMAFLHNSIISSHGSLKSSNCVVDSRFVLKITDYGLASFR--------------STAEPDDSHALYAKKLWTA 688
The following BLAST results are available for this feature:
BLAST of TCONS_00007003 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
ANPRB5.861e-3138.41Atrial natriuretic peptide receptor 2 OS=Homo sapi... [more]
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