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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00006994 ID=TCONS_00006994|Name=TCONS_00006994|organism=Clytia hemisphaerica|type=transcript|length=1671bp
GTTTCCATGAaagtaaaatatcaaaaatatgttttaaaaaactatggaca
tttttttttaactatttGTTCTACTTTACTGAATTTTAATTAGGTAATTT
AAccttatttttttttagaataaagtaaaacaaaatGCCTGCCAACAAAG
GTAGGACTTCAGAGATTAAAAAACGAGTTGCTGCTGTCAGATCAAAAAAA
GATAATCCAGGAGAGCCAGTTTACTTCAATGTCCAATTATTATCAGCAAC
GCCAGCTGGGAAAGCCATGAAATTTGAGCGCTTGGGAACCTTGGAGTCTG
TTCTTTTGACTGGTGAAAATACCCTACAAGATATTAAAACCTCTTGTTTA
AAACATTTCCAGGAAGAGACCAAAGTGTGTGACATATTGTTGGGAGAGAG
GGGCCCATCAGCTAGAGAAGGTTACAAGGCAGATTTAAGCAAAATTGTTC
ACTGCAGGCTTCTTCAGATAGATGACTTAGATGAAGTAAACAAAAAGGCA
TCAACATCCAAGTCAAAGAACACTGAACGATCCGTGGAGCCTGAAGGAcc
tttgaaatatttgaaacctgAGAAGTCTACACAACCATCAACAATTATGA
AGAGTATTGTAGTTCCAAAATCTGTCCATCCTTCAATATACATGAAAGCT
GGTCATTTGATTGAATCCAACAAGGCGATTTTTGAGTTGACATTAGAAAA
ATTTAATGTGGAGAAAATGGAATGGTGTGATCCAATATTTGCAAAGTTTG
TTATCAACAAGGGTGAATTTTCAAGGGGTGGCTTCCAAAAGGTTTTTAAA
GCCAAATGTATCAAAGGTGGATTAGAAAGAGGGTATTATCTTTTGAAATT
CCCACTTGATGATGAACCTTGGGAAAATCCTTCAGTGGCTGGTGATCCTA
ATATACCTAGAAAATCAGTCCAAATGCACTCTTTGGCTCAATATTTTGCT
TCTCGTATGTCTTTTGAAGCTCCAGGGGAGTTTGGAGAATGTTTCAAGTA
TACCACACCCTATTTTACAACAGTCAATGATGTAGCTGCAACATTAGAGG
AGTATTTGGGAGATGGTACATTTGTCAAACATATCAACAACAATGGCGAC
TTCGTCCAAGGTGACGATAAAGATGAGGTTATGATGAAAGCCGAaacttt
catgcatttttcctATGTGAAATCAAACGAGGCATTAATGGTTACTGATA
TTCAAGGCATTCGTTATTATCTAACTGACCCTGAAGTTGCATCGAAACAA
GCATTAGATGGTGATAAGAGATTTTTTTGTGAAGGTAATTGTTCAATTGT
TGCAATtaccaattttttggaaaatcatgaATGTAAAGTTAATAAGTTCT
GTAAACTTTTTGGTTTCGATAaggaatgatttttttaaagattgttgTAC
ATTTGAAACTGGTGATGAGGGTGACTTAATTATTTTCATTCTCAAGTCtt
ctttcgttttctttttctgaCTTTATATTATGACTATGTTACTTTTTAGA
AAGAATATTTGGACTCGGCAAGTATGGTCTTCtttcgttttgttttgttt
ttctgactTTATAGTATGACTATGTTACTTTTTAGAAAGAATATTTGGAC
TCTGCAATTAGTTTGGGATTTATTGAAATCATATTGGGCTTAGATGGATT
CAATTGACTTATCCAGAGGTG Run BLAST on NCBI protein sequence of TCONS_00006994-protein >TCONS_00006994-protein ID=TCONS_00006994-protein|Name=TCONS_00006994-protein|organism=Clytia hemisphaerica|type=polypeptide|length=414bp
MPANKGRTSEIKKRVAAVRSKKDNPGEPVYFNVQLLSATPAGKAMKFERL
GTLESVLLTGENTLQDIKTSCLKHFQEETKVCDILLGERGPSAREGYKAD
LSKIVHCRLLQIDDLDEVNKKASTSKSKNTERSVEPEGPLKYLKPEKSTQ
PSTIMKSIVVPKSVHPSIYMKAGHLIESNKAIFELTLEKFNVEKMEWCDP
IFAKFVINKGEFSRGGFQKVFKAKCIKGGLERGYYLLKFPLDDEPWENPS
VAGDPNIPRKSVQMHSLAQYFASRMSFEAPGEFGECFKYTTPYFTTVNDV
AATLEEYLGDGTFVKHINNNGDFVQGDDKDEVMMKAETFMHFSYVKSNEA
LMVTDIQGIRYYLTDPEVASKQALDGDKRFFCEGNCSIVAITNFLENHEC
KVNKFCKLFGFDKE Run BLAST on NCBI transcript from alignment at sc0000072:345944..347614 Legend: exonthree_prime_UTRCDSfive_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00006994 ID=TCONS_00006994|Name=TCONS_00006994|organism=Clytia hemisphaerica|type=transcript|length=1671bp|location=Sequence derived from alignment at sc0000072:345944..347614 (Clytia hemisphaerica)
CACCTCTGGATAAGTCAATTGAATCCATCTAAGCCCAATATGATTTCAAT
AAATCCCAAACTAATTGCAGAGTCCAAATATTCTTTCTAAAAAGTAACAT
AGTCATACTATAAagtcagaaaaacaaaacaaaacgaaaGAAGACCATAC
TTGCCGAGTCCAAATATTCTTTCTAAAAAGTAACATAGTCATAATATAAA
GtcagaaaaagaaaacgaaagaaGACTTGAGAATGAAAATAATTAAGTCA
CCCTCATCACCAGTTTCAAATGTAcaacaatctttaaaaaaatcattcct
TATCGAAACCAAAAAGTTTACAGAACTTATTAACTTTACATtcatgattt
tccaaaaaattggtaATTGCAACAATTGAACAATTACCTTCACAAAAAAA
TCTCTTATCACCATCTAATGCTTGTTTCGATGCAACTTCAGGGTCAGTTA
GATAATAACGAATGCCTTGAATATCAGTAACCATTAATGCCTCGTTTGAT
TTCACATaggaaaaatgcatgaaagttTCGGCTTTCATCATAACCTCATC
TTTATCGTCACCTTGGACGAAGTCGCCATTGTTGTTGATATGTTTGACAA
ATGTACCATCTCCCAAATACTCCTCTAATGTTGCAGCTACATCATTGACT
GTTGTAAAATAGGGTGTGGTATACTTGAAACATTCTCCAAACTCCCCTGG
AGCTTCAAAAGACATACGAGAAGCAAAATATTGAGCCAAAGAGTGCATTT
GGACTGATTTTCTAGGTATATTAGGATCACCAGCCACTGAAGGATTTTCC
CAAGGTTCATCATCAAGTGGGAATTTCAAAAGATAATACCCTCTTTCTAA
TCCACCTTTGATACATTTGGCTTTAAAAACCTTTTGGAAGCCACCCCTTG
AAAATTCACCCTTGTTGATAACAAACTTTGCAAATATTGGATCACACCAT
TCCATTTTCTCCACATTAAATTTTTCTAATGTCAACTCAAAAATCGCCTT
GTTGGATTCAATCAAATGACCAGCTTTCATGTATATTGAAGGATGGACAG
ATTTTGGAACTACAATACTCTTCATAATTGTTGATGGTTGTGTAGACTTC
TcaggtttcaaatatttcaaaggTCCTTCAGGCTCCACGGATCGTTCAGT
GTTCTTTGACTTGGATGTTGATGCCTTTTTGTTTACTTCATCTAAGTCAT
CTATCTGAAGAAGCCTGCAGTGAACAATTTTGCTTAAATCTGCCTTGTAA
CCTTCTCTAGCTGATGGGCCCCTCTCTCCCAACAATATGTCACACACTTT
GGTCTCTTCCTGGAAATGTTTTAAACAAGAGGTTTTAATATCTTGTAGGG
TATTTTCACCAGTCAAAAGAACAGACTCCAAGGTTCCCAAGCGCTCAAAT
TTCATGGCTTTCCCAGCTGGCGTTGCTGATAATAATTGGACATTGAAGTA
AACTGGCTCTCCTGGATTATCTTTTTTTGATCTGACAGCAGCAACTCGTT
TTTTAATCTCTGAAGTCCTACCTTTGTTGGCAGGCattttgttttacttt
attctaaaaaaaaataaggTTAAATTACCTAATTAAAATTCAGTAAAGTA
GAACaaatagttaaaaaaaaatgtccatagttttttaaaacatatttttg
atattttacttTCATGGAAAC Coding sequence (CDS) from alignment at sc0000072:345944..347614 >TCONS_00006994 ID=TCONS_00006994|Name=TCONS_00006994|organism=Clytia hemisphaerica|type=CDS|length=1245bp|location=Sequence derived from alignment at sc0000072:345944..347614 (Clytia hemisphaerica)
tcattcctTATCGAAACCAAAAAGTTTACAGAACTTATTAACTTTACATt
catgattttccaaaaaattggtaATTGCAACAATTGAACAATTACCTTCA
CAAAAAAATCTCTTATCACCATCTAATGCTTGTTTCGATGCAACTTCAGG
GTCAGTTAGATAATAACGAATGCCTTGAATATCAGTAACCATTAATGCCT
CGTTTGATTTCACATaggaaaaatgcatgaaagttTCGGCTTTCATCATA
ACCTCATCTTTATCGTCACCTTGGACGAAGTCGCCATTGTTGTTGATATG
TTTGACAAATGTACCATCTCCCAAATACTCCTCTAATGTTGCAGCTACAT
CATTGACTGTTGTAAAATAGGGTGTGGTATACTTGAAACATTCTCCAAAC
TCCCCTGGAGCTTCAAAAGACATACGAGAAGCAAAATATTGAGCCAAAGA
GTGCATTTGGACTGATTTTCTAGGTATATTAGGATCACCAGCCACTGAAG
GATTTTCCCAAGGTTCATCATCAAGTGGGAATTTCAAAAGATAATACCCT
CTTTCTAATCCACCTTTGATACATTTGGCTTTAAAAACCTTTTGGAAGCC
ACCCCTTGAAAATTCACCCTTGTTGATAACAAACTTTGCAAATATTGGAT
CACACCATTCCATTTTCTCCACATTAAATTTTTCTAATGTCAACTCAAAA
ATCGCCTTGTTGGATTCAATCAAATGACCAGCTTTCATGTATATTGAAGG
ATGGACAGATTTTGGAACTACAATACTCTTCATAATTGTTGATGGTTGTG
TAGACTTCTcaggtttcaaatatttcaaaggTCCTTCAGGCTCCACGGAT
CGTTCAGTGTTCTTTGACTTGGATGTTGATGCCTTTTTGTTTACTTCATC
TAAGTCATCTATCTGAAGAAGCCTGCAGTGAACAATTTTGCTTAAATCTG
CCTTGTAACCTTCTCTAGCTGATGGGCCCCTCTCTCCCAACAATATGTCA
CACACTTTGGTCTCTTCCTGGAAATGTTTTAAACAAGAGGTTTTAATATC
TTGTAGGGTATTTTCACCAGTCAAAAGAACAGACTCCAAGGTTCCCAAGC
GCTCAAATTTCATGGCTTTCCCAGCTGGCGTTGCTGATAATAATTGGACA
TTGAAGTAAACTGGCTCTCCTGGATTATCTTTTTTTGATCTGACAGCAGC
AACTCGTTTTTTAATCTCTGAAGTCCTACCTTTGTTGGCAGGCat
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this transcript:
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00006994-exon-sc0000072-1491911889:345944..347614 | TCONS_00006994-exon-sc0000072-1491911889:345944..347614 | Clytia hemisphaerica | exon |
| TCONS_00006994-exon-sc0000072-1510915933:345944..347614 | TCONS_00006994-exon-sc0000072-1510915933:345944..347614 | Clytia hemisphaerica | exon |
| TCONS_00006994-exon-sc0000072-1575043694:345944..347614 | TCONS_00006994-exon-sc0000072-1575043694:345944..347614 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000072 | supercontig | sc0000072:345944..347614 . |
Annotated Terms
The following terms have been associated with this transcript:
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0004674 | protein serine/threonine kinase activity |
| GO:0005524 | ATP binding |
Vocabulary: Biological Process
| Term | Definition |
|---|
| GO:0006468 | protein phosphorylation |
GO Annotation
GO Assignments
This transcript is annotated with the following GO terms.
| Category |
Term Accession |
Term Name |
| biological_process |
GO:0006468 |
protein phosphorylation |
| molecular_function |
GO:0005524 |
ATP binding |
| molecular_function |
GO:0004674 |
protein serine/threonine kinase activity |
Blast
The following BLAST results are available for this feature:
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