TCONS_00006966 (transcript) - C. hemisphaerica

Overview


Name	TCONS_00006966
Unique Name	TCONS_00006966
Type	transcript
Organism	Clytia hemisphaerica (Jellyfish)
Sequence length	2476

Sequence

The following sequences are available for this feature:

transcript sequence
protein sequence
transcript from alignment at sc0000072:613794..623890-
coding sequence from alignment at sc0000072:613794..623890-

transcript sequence

>TCONS_00006966 ID=TCONS_00006966|Name=TCONS_00006966|organism=Clytia hemisphaerica|type=transcript|length=2476bp
GCCCCGTTTTGCTGTTTTTTACTCCAACGTGCAACCTTCTAAGACCTATA
TAGCTTTCTATACAATAATcgcatttgaaaaataatttattcatCCTTAG
ATCAtttcataaaacaaataaacaaaaaaaaaagaacaagaaaTACTAAA
TTGTCATCACTGACACAATGGGAAGCCAGAAAATTGGTTTGCTAGCAATG
TTTGCTATACTGCTAGTTTTGCTCACAGAAACTTTCGCTTATGAATGTGA
TACTGTAACCCGTTCGGGTACCTCTGGCTCTTTGTCTGGCGGAAACAAAT
ATGGGTGCAGTACAAAAACTTATGATATCAACCTTGGTACTACAATGGCT
GTGAAATTGACTTGGTTGACTTTTTATAATATCCCTGGAGATATGCCTTA
CTGTACTGATGGATATGTTAAAGTTTATGCGGaTTGTGGTACGTGGCAAA
TGTCCAGAACAGAGATCGCAGAGTTTTGTTCCGGAAATATGATCTCATCC
CTCCCTCACGACATTTATGCGTATACAAATTGTTTGAGATTGGTGGTCAA
AAATCCAAATACTTATTCTTCAAAAGGCACTTTTTCTGTTACTTGGGGTC
GATATTCGTATGGATTGCCATCCTGCTCGTATTCATCGGTAACAAAAACC
TCATCAAGTGGAGTCATGGCAACACCAAGCTGGCCCAATCCATCATATAG
ATCATCCTGCTCGTGGAAACTTGATCGTTCAAAATCTAACGGATATCTTA
TTCACGTTATGGACATTAAAGACCAAACTTATTCATCTTATTGTTCCTCT
AGCGAACAACAAATAACGATCAAAGacGAGGGAGACTTTGAATACAGTGG
AAAAGACATTTGTACTCGTGATAACCCTATCCAATATTACCAGCCTACCG
TCAAGATCAGTTACAGCCAAGGGACTGATTGGAATAAGCGAGGCGTTGTT
GTCGGATGGGTCGCTTTCAAAGACCCTTATTACActGATGTTGGAGCAAT
TGGAGGATACATTGCTGCAGGGATTTTGGTTCCCATATTCATACTTTGTA
TCATCGTGTGCGCATGCTTGAAACAAAAACGAGGCTACGTGTTCAGCCAA
AGAGCTGCCGGATTTAACAACATGCCGCAAGGCAATAACGTGACTGTCGT
CAATAACCAAACTTCAACGgCTCAACAACAATATGTTCCACCGCCCCAAC
AAGGATATCCAGCACAACAACCAGCTTACCCACCACCCCAACAGGGCGCT
TACCCGCCGCCCCAACAAGGTGCTTATCCAAACCAAGGTTACGCCCCACA
AACACAACCTGGAGCTTATCCTCAACCAGGGGCATATCCGCCGCCCCAGC
AAGGATATCCGCCCGTCTCTCAACACGGATACGCTCCACCGCCCGTTTAT
CAAGAATCTGCAACGCCCCAACCACAACCACCAGTCCAATAAAGTCATTG
CTTAAAACCTCAATGAAAGAAACGCACTATTTGGCGATAATTAAGCTTTG
TATTCCTGTTGTTGTAAAAAGACACATTTTACCtgtaaaacttttttcac
atgcacgtaaaattttactttagaccttacggaaaatcgttcgtaaggct
gtcttttgggaatttcctcGTAACTATGTAGAGTTTTTgttctaccactg
cactacggtcgcttggAAAGTGGTTGACGGCGGCAGTACCGCAAACCAGA
GGTTTCTGGTTCGAATTTCCGTTGCGCCGTGTGACCTTGGATAATTCGAA
TCTgtttataattcgaactaaatccTTGGTCCTCTGAGATTTAAAATCGT
CATAATACtcataatttgaatctttcCCTAATTCAAAGGAAATTCCCTTA
AGTGAAactttacgtacatgtgaaaaaagctaaaacatCACTAACCCGAT
TGACTATAGAATTTCAAAACGATTTCTTTCTGTTCTCTTCTGTTGTTTAT
AATGGGCACAATACTATGAAGTTTGTGTTGGGTGCTCCTATAGTTCTTTT
ATAGATTTAGGATTGTAATTTTAATGATATCATTTATTTTAggatttata
atattttttgatgatttttagatCTGCACTTCATATGCATATACATTTTA
AATTCGATATATAttgcttttatttttgataatttttttaaaatggaTAT
TAAATATTTGATCTAGAATATGTccatatacacgctttttttataagaac
aattttataagaacacgaggctgaaaattgaccaaaacctaagaacaaat
taagaataatgcgaGCGTCAGATTTCGAAGATACTAAGAAAGTACTGATT
CTAAACCTATTTTTAAGAACATCATACAGAACATTTAGgccttgaaattt
caaaaaattcagaaCAGCTCAGCtcgagccaaaatttactgtttcttata
aaaaaaacttgtatccATGTTTGTCTACGTTTGTCTGTTTGTTGtgtcta
aataaaaaaatgtttaaataaTGCTG

Run BLAST on NCBI

protein sequence of TCONS_00006966-protein

>TCONS_00006966-protein ID=TCONS_00006966-protein|Name=TCONS_00006966-protein|organism=Clytia hemisphaerica|type=polypeptide|length=424bp
MGSQKIGLLAMFAILLVLLTETFAYECDTVTRSGTSGSLSGGNKYGCSTK
TYDINLGTTMAVKLTWLTFYNIPGDMPYCTDGYVKVYADCGTWQMSRTEI
AEFCSGNMISSLPHDIYAYTNCLRLVVKNPNTYSSKGTFSVTWGRYSYGL
PSCSYSSVTKTSSSGVMATPSWPNPSYRSSCSWKLDRSKSNGYLIHVMDI
KDQTYSSYCSSSEQQITIKDEGDFEYSGKDICTRDNPIQYYQPTVKISYS
QGTDWNKRGVVVGWVAFKDPYYTDVGAIGGYIAAGILVPIFILCIIVCAC
LKQKRGYVFSQRAAGFNNMPQGNNVTVVNNQTSTAQQQYVPPPQQGYPAQ
QPAYPPPQQGAYPPPQQGAYPNQGYAPQTQPGAYPQPGAYPPPQQGYPPV
SQHGYAPPPVYQESATPQPQPPVQ

Run BLAST on NCBI

transcript from alignment at sc0000072:613794..623890-

Legend: exonfive_prime_UTRCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

>TCONS_00006966 ID=TCONS_00006966|Name=TCONS_00006966|organism=Clytia hemisphaerica|type=transcript|length=10097bp|location=Sequence derived from alignment at sc0000072:613794..623890- (Clytia hemisphaerica)
GCCCCGTTTTGCTGTTTTTTACTCCAACGTGCAACCTTCTAAGACCTATA
TAGCTTTCTATACAATAATCGCATTTGAAAAATAATTTATTCATCCTTAG
ATCATTTCATAAAACAAATAAACAAAAAAAAAAGAACAAGAAATACTAAA
TTGTCATCACTGACACAATGGGAAGCCAGAAAATTGGTTTGCTAGCAATG
TTTGCTATACTGCTAGTTTTGCTCACAGAAACTTTCGCTTATGAATGTGA
TACTGTAACCCGTTCGGGTACCTCTGGCTCTTTGTCTGGCGGAAACAAAT
ATGGGTGCAGTACAAAAACTTATGATATCAACCTTGGTACTACAATGGCT
GTGAAATTGACTTGGTTGACTTTTTATAATATCCCTGGAGATATGCCTTA
CTGTACTGATGGATATGTTAAAGTTTATGCGGAGTAAGTTTTTTGTTTTT
TCCCAGCTGGCCCACAACGTTGTTTCAACGTTTATCTAACGTTCATGACG
TCCATATAACGTTAAATGAACGTTGAAACAACGTTGTGTGCCTGCTGGGT
CTTTTATACGAAATATCACCATTTAACGGCCACTACATTCATATAAAGTT
TACAAACCTCTAAACCTAGCCTGTACCACCCCGCCCTCGGACGTTTTTTA
TATTTTGAAAAAAATGTCGCAGACACGGAATGTTGCTTAACTGTAACAAA
CCGAACTTTGTGTTATCTTTTCAGTCAGTGAAGAAGAGTTTGGTACTGGC
TACTACATCCCCTCCCCCAGAATTCGAGGGGATGTGCCCACTAAGCAGAT
GTATACTACTTTTTTTGTTAACTCCCTAGCGATATTATATAATTGGTCTT
CGCGGGAGGTTTTTGTTGTTAACAGTAGCGTAGACAAGGAGCGCAAAGTT
TGTTTAGAAGAGCATTACTGCTCTCTCACACAGCTTTGGCACCCTCTTGT
CTCCTGTTCTGAGTGGGACGAGGTGGAGTTTTTACAAGTTCTTATTTGAT
TTGGTTGGTTGTTAACCAGTAATAAAACAATTTTGTTACTTTTTCTAAAG
AGCGCGTCATTTCTATTACTTCAAATGACCAATTATTAAAGTATCTTATA
AAACTTCATCCCATCTGTACTTAGAATTGTTTGTTTGTGGCACCTACAGA
GTTAGTTCACATAATGTTTCCAGCTCACCCAAATAGAGACTCTTACGCAT
GCGTAATTTATCGTTCTTTTCAACCAGATGTAGTTAATTCTCGTGATAAA
CAAAGAGGAATGAATCTGTAGGGGTTGTATAGTCTCCTATAATCTCTTTG
AGTCGGGTTTGTGGATGGCGAAATATGTCGTTCTTTGATGGTTAGGGTTA
GGGTTAGGGTTAGGGTTTGCCGTTGCCGTTCTTTTTGTCGATTTTTTAAT
AATTATTTGTTGCTCTTTTTAGATGGTTTGGAAACGTTAGATGAATACAG
TCTCTATAAAAAACTACTTTGTCATTTTGTCTTTTTAGTTGTGGTACGTG
GCAAATGTCCAGAACAGAGATCGCAGAGTTTTGTTCCGGAAATATGATCT
CATCCCTCCCTCACGACATTTATGCGTATACAAATTGTTTGAGATTGGTG
GTCAAAAATCCAAATACTTATTCTTCAAAAGGCACTTTTTCTGTTACTTG
GGGTCGATATTCGTATGGATTGCCATCCTGCTCGTATTCATCGGTGTAAG
TANTTCAGAAATCATATAAAATTAAAACACCAAAAGATGGAATACATTCT
AAAACCCCATCAAAATTTATGAAACTATAATAAAAACATGAAAATTCCTC
CTAAGTTAGAAATATTTTGCTGCCAACTCGAGCAAAGCCAAAAAATGGAG
TCTGCTAAATTACACCGGTTCATATATCAGCGCCATCCAGTCTATCAAAA
TGCTGTATAAGTGGCTCCCGTGCTAGGATATACCTGATTGGGTTTGATAT
AATGGGGTTAACTGCAGTTGGGGCGTCCCGAAGGTAGGTACTATGCACCC
TGGATTACTCCACTTGCCTTTGACCATTCTATTTCATTTATGCCGTGGAG
GCATCAAGTACATTGGTATGATCGGGCTAGGAATTGAACCCACGAATTTG
TGCACTCTACNGCGTTTGTGTAAAAACTACGCGCGGGTGTTCTGGGTGGT
TTAATTTCTCATCCAGGAGTCTCTAGACCTTCGGGTTTGAATTGCCAAGT
TATTAAGAACAACATACCTAGCTTTAAACCTGGAACCTGTACAATGTGTC
TGGAAAAAAATATTACATCAGAACAACAAACAGAAACAAAAGTAGAAATC
TTTGGTTTTCCTTCTTTTTTATCATAATACAAAGCACCCAACGACATGTT
TTGATCTTCTTCTTTTCTTAAGACACTCAGTGTAAAAAAAAAACCTTTTA
TACCTTATTNTGAAATTACATCACGGATCCAATAGCTGATTGGTTGTAAG
TGACGTACAATTAGTCATTACGTCACTTTGAACCAATCAGCTTTTAAATG
CGTGGAAGACATTGCAATGATGCATATCATGAATAGTCAGCATAAAATCG
ACTACAAAAAGTCAATGCGATTCTTTGTTTTGATACTAATGTAGTGACAT
CTTTTCAACTTTTTCCTGCGTGTTCGAATTACGGGGACTCCACTGTACTA
TCAATAAAATTTTGATATGGAAAATTAAAATGTTATATTCTGTGAAGGTA
GAACACCCGCCCCATGGTGCGTGAGGTGGTCCAGCCCGAGTCAAACCAAA
GCTCCTCTAATCGTACTTGATGCTTTTGCTTGGTGCTCAGTTACTTGAGT
AAACTTTCCATGGAAAGTAATGGCTTCTCCCTCTAACTTTGGAAAGACTT
CTTGCTGTTTAGTAATCATTCTTCATCGAAGAGGTCTGCCTACGGGAATT
TTTTTATAAAACAGACAATGTGCACATGGTGTACAGTACAACGATAAACC
TCGACTGCGGTCACACGTCTTTACNAACGACATGTTTTGATCTTCTTCTT
TTCTTAAGACACTCAGTGTAAAAAAAAACCTTTTATACCTTATCGGGGAA
AATGTCGTCAGGGAAAAGTGACGAAATTTTGGCCAAATGACGAAAATTTT
CCCCGGCCTTAATGCGTTTACCAACTGCCAGCAAATGACGAATATTTTTC
CCCGACGAAAATTTTCCCCGGCGAAGTTTTCCCCGATAAGGTATTTTGTT
GTTGATTTTATAGAACAAAAACCTCATCAAGTGGAGTCATGGCAACACCA
AGCTGGCCCAATCCATCATATAGATCATCCTGCTCGTGGAAACTTGATCG
TTCAAAATCTAACGGATATCTTATTCACGTTATGGACATTAAAGACCAAA
CTTATTCATCTTATTGTTCCTCTAGCGAACAACAAATAACGATCAAAGGT
AAGTTTCCAATACAAAACTTTGTTAAGTGTGTTTGTGACATCGAGGCAAA
TTAAAGATCAAACTTGTTCTTCTTATTGTTCCTCTAATGAGCAACAAATA
ACGATCAAAGGTAAGTTTATCATACAAAACTCTGTTAAGTGTGTTTGGGA
CATCGAGGCAAATTAAAGATCAAACTTGTTTTTCTTATTGTTCCTCCAGC
GAGCAACAAATAACGATCAAAGGTAAGTTTATCATACAAAACTCTGTTAA
GTGTGTTTCAATCTTAAATTTTTTCAGAAATCATATAAAATTAAAACACC
AAAAGATGGAATACATTCTAAAACCCCATCAAAATTTATGAAACTATAAT
AAAAACATGAAAATACCTCCTAAGTTAGAAAAATTTTGCTGCCAACTCGA
GCAAAGCCAAAAAATGGAGTCTGCTAAATTACACCGGTTCATATATCAGC
GCCATCCAGTCTATCAAAATGCTGTATAAGTGGCTCCCGTGCTAGGATAT
ACCTGATTGGGTTTGATATAATGGGGTTAACTGCAGTTGGGGCGTCCCGA
AGGTAGGTACTATGCACCCTGGATTACTCCACTTGCCTTTGACCATTCTA
TTTCATTTATGCCGTGGAGGCATCAAGTACATTGGTATGATCGGGCTAGG
AATTGAACCCACGAATTTGTGCACTCTACCTTTACACTTAGCTTCGCTTG
ACCAATAACAATTCATGATATGCACCATTGCAATGTCTTCTGAAATTACA
TCACGGATCCAATAGCTGATTGGTTGTAAGTGACGTACAATTAGTCATTA
CGTCACTTTGAACCAATCAGCTTTTAAATGCGTGGAAGACATTGCAATGA
TGCATATCATGAATAGTCAGCATAAAATCGACTACAAAAAGTCAATGCGA
TTCTTTGTTTTGATACTAATGTAGTGACTTCTTTTCAACTTTTTCCTGCG
TGTTTGAATTATGAACACTCCACTGTACTATCAATAAAATTTTGATATGG
AAAATTAAAATGTTATATTCTGTGAAGGTAGAACACCCGCCCCATGGTGC
GTAAGGTGGTCCAGCCCGAGTCAAACCAAAGCTCCTCTAATCGTACTTGA
TGCTTTTGCTTGGTGCTCAGTTACTTAAGTAAACTTTCCAGGGAAAGTAA
TGGCTTCTCCCTCTAACTTTGGAAAGACTTCTTGCTATTTAGTAATCATT
CTTCATCGAAGAGGTCTCCCTACGGGAATTTTTTTATAAAACAGACAATG
TGCACATGGTGTACAGTACAACGAAACGATGAACCTCGACTGCGGTCACA
CCTTTGATAACTTAACATTCATCTTCTGGTCAGGCCTTAGAACATCTCCT
AATCACTCATTTTTGCTTTCACCGCGTTTACTCTGCCAAGCCAAACGCGG
TGACTCAAATCTCCTTTATAAGATATTTTACTTTTTTTCAGACGAGGGAG
ACTTTGAATACAGTGGAAAAGACATTTGTACTCGTGATAACCCTATCCAA
TATTACCAGCCTACCGTCAAGATCAGTTACAGCCAAGGGACTGATTGGAA
TAAGCGAGGCGTTGTTGTCGGATGGGTCGCTTTCAAAGACCCTTATTACA
GTAAGTTAAACTATACGTTTGTTGTTTTACAAGAATAAACTATATAAGAA
CATAAGGCTTCTATGGCCAAAATGTTAAGAATACGCTAAGAGCATTTTAA
GGCTTCGCGGACTCTAAAACACCCGATTTCTTAAAAATTGGGCAAAATTA
CTCAAAAAATGGCCAGAATAAGAACATGTTAAGAATATTCATATCCTTAA
AACTCAAAAAGTTAAGAACATCCGAAGGCTTCAAAAAATTTGGATGTTCT
TATAAAAAAACGTGTATATTTCGATTCGGAGAAAATTTGGGTATGTTTCT
TTATGTGATAAATTGTTATTGATTTTCGTAGAGAATATCTGCTGGGAGGG
GCCTGGGGTTGTCTGGTAGGTTGGAGAGTAAGTAAGACTGCGACCGCAAT
CGGAGGCGACTCGAAGACTCCTCTTTTGATAGCTATCTACCCGAAGGTAA
GGCAGGGCCAGGGGGGAGGGGTACGCTTTCTCCCTGGATTACTCCACTTA
CCCTTGATCTTCGCTTAATTGCTGAGCATTAAACAGAGAGGCATCAAATA
CCATGAAGGGGATATGACCCGGCTGGGGGTCGAACCCACAACCTTGTGCA
CCGTAGCCGGATGCTCTACCACTGCACTACGGTCGCTTGGAAAGTGGTTG
ACGGCGGCAGAACCGCAAACCAGAGGTTTCTGGTTCGAATTTCTGTTGCG
CCGTGTGACCTTGGATAATTTGAATCTGTTTATAATGCGAACTAAAGCAT
TGGTCCTCTGAGATTTAAAACCGTCATAGGCTGCGTTTAGACCAACTGGC
ATTTGTAATTTGGCATTTGCTCATGAGGGATTCGATTTTAATAGCTTTTC
CATTGTATTTTCTGTCATGGCATTTAANNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTTTGAAAT
GCCAGAAAAGGGGATTCCTTTGCTCAAAATGGCATTTCAAATGCCAACGT
AATGCCAACACGCTGGCATCATTAGGCATTTGATAAACCGAACAATTGCG
CGGAATAATAGAATTCAAAAGAATACTGCAAGCAATTACAAATGCCAGGC
TGGTCTAAACGCAGCTATAATACTCATAATTTGAATCTTTCTCTAATTCA
AAGGAAATCAGATCCAATAGACCTTTTCATAAATTACGTCAGAAACATCA
CTTGCCTCGTATCCAAACAATTACCATGGTCATTATGTCTCTTGAGACAT
TTAATGATTTTTTTTATGAAGAGGAAGTAGTTTTGATAAAATCCGCTGGG
AGTTAATCACTATGGCAATAATTTCAAAACGAGGTAAGTGATGTTCGTAA
CGGAATTTATGTAGGTCTATTAGAGAAATCATTTATAAAATTTCAAAATT
TTCAGCTGATGTTGGAGCAATTGGAGGATACATTGCTGCAGGGATTTTGG
TTCCCATATTCATACTTTGTATCATCGTGTGCGCATGCTTGAAACAAAAA
CGAGGCTACGTGTTCAGCCAAAGAGCTGCCGGATTTAACAACATGCCGCA
AGGCAATAACGTGACTGTCGTCAATAACCAAACTTCAACGGGTAAAATTT
TATTATCTAGCACCTCACCAAAAAACTGGGATTTTTTATTTGGTTTCTTG
GTGATTTCTATTTTGATGATTTTTCGAAAAATAGATGTTTTTTCAAGTGT
TCTAACTATGGCGTTCTAAATCTTTTTCAAAATGACTTCAAGATTTAAAA
CGCCATGGTTCTTACCCTGAGTATCAGAGGTTAAGTTTTCAAAGAATATA
TTAACCTCTGAAGACCAATAATAGAAATTTTATCGCGCATGTGTCAATCT
AATCACTGTAGAACGAATCAAAGATGGAGAGCAAATATTACCTTATTAAT
GTCTAGCAGACTGTATCAGTATGCAGTTTACTATTTAAGAATTCCCCAGA
AACCTCCAAGTGTAATTGAAGTGAGTTTCTTTCGAAAGAAATTTTTTACA
TGATCCCCAAATGTATAACAGTTATTACTAAACTACTAATTATGGAAATG
TCACTTTTAATTGAATCGAAATAATAGACAGGCTTTATGTTATGATTCTC
TATCACTGACTCTTTTTAAAAAGCATTGATGATATTNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNAAAGATATCAACTTT
GAACTTCATCCAAGATCTTGGATGGTCGTCATGGTTACTTTTGTCTTCGT
TGATTGCGCGATGAATAGAATCTCGATTCGTCGTCACAGCGTCAATATAT
GATTTTGACCTGTGCTTTTCACGGTACATGGTTCTGACTCTAATTCGATT
TTTTCACTACTGCAGGAGCTTCAAAAGTTAGAAATGACGTTAAAAATCGA
ATGTTTGGAGCCCAAAAATCTGAGCTCAAAACATTCGAAAAAGTCGCAAA
GTGGAATAGACGATACTGCGTAGAAAAAGCCGTAACATCTAGTATAGGCT
AACTTATTTTTTGCATTTTCTGGAAAATCTTTTAATCCCCCGTGTTGGGG
AAGACATTTTCTGCCCAGTAAGTTGAGGGGTTAGCTCAAAAGCACGACCA
TCCAGGTGTGTTAGTGAAAGTCCAGGGGGCTTTTTAGAATTTAGCGGTGA
AAATACAAGAAAAGGTCACTTTTTGTTGCTTTCTAAAACCCTTTTATCTC
TCTGTGTTTTCAGTAATTCCTTTGTCCATCAGGTTACCGCAAACTTACCA
TAAATTTTCTTCTTCAAACTCAAAATACAAAAAAAGTCAAAATGCATTTC
CAGGAATGCCAGCATTTCTCTGGACAAATACAATATTTTTCTAAATGTTC
AGAGCTCCAGATCGAGCCAATGAATCAAAATTTCGGAATTACAAAATTTA
ACATTAATCTGGAAAACACAGTGTTTTAAGAAATTCAACTAAACGGAATT
AACTGAACCCTAAGACATTTCCATGAAACAATGTAAAACTTCTGATTTTT
CGACATGATCTAGGCTCTTAGAATTTCTAAGCAAGTCTCAAGATTTGATC
ATTTAGATCTTGTTAGTAATAAAAATTACTTCGCGCGGCTAAAACAGGCT
GAAGTAGCTTAATGTTAACACTTCTTTTTGTCAGTTAGCTTCCTTTTCTT
TTGTGACAAAGTTCAGGATCATTAACGAGCAAAATGACAAACTTTAAAGA
TCGGAACTAAANAGTTAGCTCCCTTTTCTTTTGTGACAAAGTTCAGGATC
ATTAACCAGCAAAATGACAAACTGTTTTCTCACTATTTCAGCTCAACAAC
AATATGTTCCACCGCCCCAACAAGGATATCCAGCACAACAACCAGCTTAC
CCACCACCCCAACAGGGCGCTTACCCGCCGCCCCAACAAGGTGCTTATCC
AAACCAAGGTTACGCCCCACAAACACAACCTGGAGCTTATCCTCAACCAG
GGGCATATCCGCCGCCCCAGCAAGGATATCCGCCCGTCTCTCAACACGGA
TACGCTCCACCGCCCGTTTATCAAGAATCTGCAACGCCCCAACCACAACC
ACCAGTCCAATAAAGTCATTGCTTAAAACCTCAATGAAAGAAACGCACTA
TTTGGCGATAATTAAGCTTTGTATTCCTGTTGTTGTAAAAAGACACATTT
TACCTGTAAAACTTTTTTCACATGCACGTAAAATTTTACTTTAGACCTTA
CGGAAAATCGTTCGTAAGGCTGTCTTTTGGGAATTTCCTCGTAACTATGT
AGAGTTTTTGTTCTACCACTGCACTACGGTCGCTTGGAAAGTGGTTGACG
GCGGCAGTACCGCAAACCAGAGGTTTCTGGTTCGAATTTCCGTTGCGCCG
TGTGACCTTGGATAATTCGAATCTGTTTATAATTCGAACTAAATCCTTGG
TCCTCTGAGATTTAAAATCGTCATAATACTCATAATTTGAATCTTTCCCT
AATTCAAAGGAAATTCCCTTAAGTGAAACTTTACGTACATGTGAAAAAAG
CTAAAACATCACTAACCCGATTGACTATAGAATTTCAAAACGATTTCTTT
CTGTTCTCTTCTGTTGTTTATAATGGGCACAATACTATGAAGTTTGTGTT
GGGTGCTCCTATAGTTCTTTTATAGATTTAGGATTGTAATTTTAATGATA
TCATTTATTTTAGGATTTATAATATTTTTTGATGATTTTTAGATCTGCAC
TTCATATGCATATACATTTTAAATTCGATATATATTGCTTTTATTTTTGA
TAATTTTTTTAAAATGGATATTAAATATTTGATCTAGAATATGTCCATAT
ACACGCTTTTTTTATAAGAACAATTTTATAAGAACACGAGGCTGAAAATT
GACCAAAACCTAAGAACAAATTAAGAATAATGCGAGCGTCAGATTTCGAA
GATACTAAGAAAGTACTGATTCTAAACCTATTTTTAAGAACATCATACAG
AACATTTAGGCCTTGAAATTTCAAAAAATTCAGAACAGCTCAGCTCGAGC
CAAAATTTACTGTTTCTTATAAAAAAAACTTGTATCCATGTTTGTCTACG
TTTGTCTGTTTGTTGTGTCTAAATAAAAAAATGTTTAAATAATGCTG

Coding sequence (CDS) from alignment at sc0000072:613794..623890-

>TCONS_00006966 ID=TCONS_00006966|Name=TCONS_00006966|organism=Clytia hemisphaerica|type=CDS|length=7650bp|location=Sequence derived from alignment at sc0000072:613794..623890- (Clytia hemisphaerica)
CTCAACAACAATATGTTCCACCGCCCCAACAAGGATATCCAGCACAACAA
CCAGCTTACCCACCACCCCAACAGGGCGCTTACCCGCCGCCCCAACAAGG
TGCTTATCCAAACCAAGGTTACGCCCCACAAACACAACCTGGAGCTTATC
CTCAACCAGGGGCATATCCGCCGCCCCAGCAAGGATATCCGCCCGTCTCT
CAACACGGATACGCTCCACCGCCCGTTTATCAAGAATCTGCAACGCCCCA
ACCACAACCACCAGTCCAATAACTGATGTTGGAGCAATTGGAGGATACAT
TGCTGCAGGGATTTTGGTTCCCATATTCATACTTTGTATCATCGTGTGCG
CATGCTTGAAACAAAAACGAGGCTACGTGTTCAGCCAAAGAGCTGCCGGA
TTTAACAACATGCCGCAAGGCAATAACGTGACTGTCGTCAATAACCAAAC
TTCAACGGACGAGGGAGACTTTGAATACAGTGGAAAAGACATTTGTACTC
GTGATAACCCTATCCAATATTACCAGCCTACCGTCAAGATCAGTTACAGC
CAAGGGACTGATTGGAATAAGCGAGGCGTTGTTGTCGGATGGGTCGCTTT
CAAAGACCCTTATTACAAACAAAAACCTCATCAAGTGGAGTCATGGCAAC
ACCAAGCTGGCCCAATCCATCATATAGATCATCCTGCTCGTGGAAACTTG
ATCGTTCAAAATCTAACGGATATCTTATTCACGTTATGGACATTAAAGAC
CAAACTTATTCATCTTATTGTTCCTCTAGCGAACAACAAATAACGATCAA
AGTTGTGGTACGTGGCAAATGTCCAGAACAGAGATCGCAGAGTTTTGTTC
CGGAAATATGATCTCATCCCTCCCTCACGACATTTATGCGTATACAAATT
GTTTGAGATTGGTGGTCAAAAATCCAAATACTTATTCTTCAAAAGGCACT
TTTTCTGTTACTTGGGGTCGATATTCGTATGGATTGCCATCCTGCTCGTA
TTCATCGGTATGGGAAGCCAGAAAATTGGTTTGCTAGCAATGTTTGCTAT
ACTGCTAGTTTTGCTCACAGAAACTTTCGCTTATGAATGTGATACTGTAA
CCCGTTCGGGTACCTCTGGCTCTTTGTCTGGCGGAAACAAATATGGGTGC
AGTACAAAAACTTATGATATCAACCTTGGTACTACAATGGCTGTGAAATT
GACTTGGTTGACTTTTTATAATATCCCTGGAGATATGCCTTACTGTACTG
ATGGATATGTTAAAGTTTATGCGGACTCAACAACAATATGTTCCACCGCC
CCAACAAGGATATCCAGCACAACAACCAGCTTACCCACCACCCCAACAGG
GCGCTTACCCGCCGCCCCAACAAGGTGCTTATCCAAACCAAGGTTACGCC
CCACAAACACAACCTGGAGCTTATCCTCAACCAGGGGCATATCCGCCGCC
CCAGCAAGGATATCCGCCCGTCTCTCAACACGGATACGCTCCACCGCCCG
TTTATCAAGAATCTGCAACGCCCCAACCACAACCACCAGTCCAATAACTG
ATGTTGGAGCAATTGGAGGATACATTGCTGCAGGGATTTTGGTTCCCATA
TTCATACTTTGTATCATCGTGTGCGCATGCTTGAAACAAAAACGAGGCTA
CGTGTTCAGCCAAAGAGCTGCCGGATTTAACAACATGCCGCAAGGCAATA
ACGTGACTGTCGTCAATAACCAAACTTCAACGGACGAGGGAGACTTTGAA
TACAGTGGAAAAGACATTTGTACTCGTGATAACCCTATCCAATATTACCA
GCCTACCGTCAAGATCAGTTACAGCCAAGGGACTGATTGGAATAAGCGAG
GCGTTGTTGTCGGATGGGTCGCTTTCAAAGACCCTTATTACAAACAAAAA
CCTCATCAAGTGGAGTCATGGCAACACCAAGCTGGCCCAATCCATCATAT
AGATCATCCTGCTCGTGGAAACTTGATCGTTCAAAATCTAACGGATATCT
TATTCACGTTATGGACATTAAAGACCAAACTTATTCATCTTATTGTTCCT
CTAGCGAACAACAAATAACGATCAAAGTTGTGGTACGTGGCAAATGTCCA
GAACAGAGATCGCAGAGTTTTGTTCCGGAAATATGATCTCATCCCTCCCT
CACGACATTTATGCGTATACAAATTGTTTGAGATTGGTGGTCAAAAATCC
AAATACTTATTCTTCAAAAGGCACTTTTTCTGTTACTTGGGGTCGATATT
CGTATGGATTGCCATCCTGCTCGTATTCATCGGTATGGGAAGCCAGAAAA
TTGGTTTGCTAGCAATGTTTGCTATACTGCTAGTTTTGCTCACAGAAACT
TTCGCTTATGAATGTGATACTGTAACCCGTTCGGGTACCTCTGGCTCTTT
GTCTGGCGGAAACAAATATGGGTGCAGTACAAAAACTTATGATATCAACC
TTGGTACTACAATGGCTGTGAAATTGACTTGGTTGACTTTTTATAATATC
CCTGGAGATATGCCTTACTGTACTGATGGATATGTTAAAGTTTATGCGGA
CTCAACAACAATATGTTCCACCGCCCCAACAAGGATATCCAGCACAACAA
CCAGCTTACCCACCACCCCAACAGGGCGCTTACCCGCCGCCCCAACAAGG
TGCTTATCCAAACCAAGGTTACGCCCCACAAACACAACCTGGAGCTTATC
CTCAACCAGGGGCATATCCGCCGCCCCAGCAAGGATATCCGCCCGTCTCT
CAACACGGATACGCTCCACCGCCCGTTTATCAAGAATCTGCAACGCCCCA
ACCACAACCACCAGTCCAATAACTGATGTTGGAGCAATTGGAGGATACAT
TGCTGCAGGGATTTTGGTTCCCATATTCATACTTTGTATCATCGTGTGCG
CATGCTTGAAACAAAAACGAGGCTACGTGTTCAGCCAAAGAGCTGCCGGA
TTTAACAACATGCCGCAAGGCAATAACGTGACTGTCGTCAATAACCAAAC
TTCAACGGACGAGGGAGACTTTGAATACAGTGGAAAAGACATTTGTACTC
GTGATAACCCTATCCAATATTACCAGCCTACCGTCAAGATCAGTTACAGC
CAAGGGACTGATTGGAATAAGCGAGGCGTTGTTGTCGGATGGGTCGCTTT
CAAAGACCCTTATTACAAACAAAAACCTCATCAAGTGGAGTCATGGCAAC
ACCAAGCTGGCCCAATCCATCATATAGATCATCCTGCTCGTGGAAACTTG
ATCGTTCAAAATCTAACGGATATCTTATTCACGTTATGGACATTAAAGAC
CAAACTTATTCATCTTATTGTTCCTCTAGCGAACAACAAATAACGATCAA
AGTTGTGGTACGTGGCAAATGTCCAGAACAGAGATCGCAGAGTTTTGTTC
CGGAAATATGATCTCATCCCTCCCTCACGACATTTATGCGTATACAAATT
GTTTGAGATTGGTGGTCAAAAATCCAAATACTTATTCTTCAAAAGGCACT
TTTTCTGTTACTTGGGGTCGATATTCGTATGGATTGCCATCCTGCTCGTA
TTCATCGGTATGGGAAGCCAGAAAATTGGTTTGCTAGCAATGTTTGCTAT
ACTGCTAGTTTTGCTCACAGAAACTTTCGCTTATGAATGTGATACTGTAA
CCCGTTCGGGTACCTCTGGCTCTTTGTCTGGCGGAAACAAATATGGGTGC
AGTACAAAAACTTATGATATCAACCTTGGTACTACAATGGCTGTGAAATT
GACTTGGTTGACTTTTTATAATATCCCTGGAGATATGCCTTACTGTACTG
ATGGATATGTTAAAGTTTATGCGGACTCAACAACAATATGTTCCACCGCC
CCAACAAGGATATCCAGCACAACAACCAGCTTACCCACCACCCCAACAGG
GCGCTTACCCGCCGCCCCAACAAGGTGCTTATCCAAACCAAGGTTACGCC
CCACAAACACAACCTGGAGCTTATCCTCAACCAGGGGCATATCCGCCGCC
CCAGCAAGGATATCCGCCCGTCTCTCAACACGGATACGCTCCACCGCCCG
TTTATCAAGAATCTGCAACGCCCCAACCACAACCACCAGTCCAATAACTG
ATGTTGGAGCAATTGGAGGATACATTGCTGCAGGGATTTTGGTTCCCATA
TTCATACTTTGTATCATCGTGTGCGCATGCTTGAAACAAAAACGAGGCTA
CGTGTTCAGCCAAAGAGCTGCCGGATTTAACAACATGCCGCAAGGCAATA
ACGTGACTGTCGTCAATAACCAAACTTCAACGGACGAGGGAGACTTTGAA
TACAGTGGAAAAGACATTTGTACTCGTGATAACCCTATCCAATATTACCA
GCCTACCGTCAAGATCAGTTACAGCCAAGGGACTGATTGGAATAAGCGAG
GCGTTGTTGTCGGATGGGTCGCTTTCAAAGACCCTTATTACAAACAAAAA
CCTCATCAAGTGGAGTCATGGCAACACCAAGCTGGCCCAATCCATCATAT
AGATCATCCTGCTCGTGGAAACTTGATCGTTCAAAATCTAACGGATATCT
TATTCACGTTATGGACATTAAAGACCAAACTTATTCATCTTATTGTTCCT
CTAGCGAACAACAAATAACGATCAAAGTTGTGGTACGTGGCAAATGTCCA
GAACAGAGATCGCAGAGTTTTGTTCCGGAAATATGATCTCATCCCTCCCT
CACGACATTTATGCGTATACAAATTGTTTGAGATTGGTGGTCAAAAATCC
AAATACTTATTCTTCAAAAGGCACTTTTTCTGTTACTTGGGGTCGATATT
CGTATGGATTGCCATCCTGCTCGTATTCATCGGTATGGGAAGCCAGAAAA
TTGGTTTGCTAGCAATGTTTGCTATACTGCTAGTTTTGCTCACAGAAACT
TTCGCTTATGAATGTGATACTGTAACCCGTTCGGGTACCTCTGGCTCTTT
GTCTGGCGGAAACAAATATGGGTGCAGTACAAAAACTTATGATATCAACC
TTGGTACTACAATGGCTGTGAAATTGACTTGGTTGACTTTTTATAATATC
CCTGGAGATATGCCTTACTGTACTGATGGATATGTTAAAGTTTATGCGGA
CTCAACAACAATATGTTCCACCGCCCCAACAAGGATATCCAGCACAACAA
CCAGCTTACCCACCACCCCAACAGGGCGCTTACCCGCCGCCCCAACAAGG
TGCTTATCCAAACCAAGGTTACGCCCCACAAACACAACCTGGAGCTTATC
CTCAACCAGGGGCATATCCGCCGCCCCAGCAAGGATATCCGCCCGTCTCT
CAACACGGATACGCTCCACCGCCCGTTTATCAAGAATCTGCAACGCCCCA
ACCACAACCACCAGTCCAATAACTGATGTTGGAGCAATTGGAGGATACAT
TGCTGCAGGGATTTTGGTTCCCATATTCATACTTTGTATCATCGTGTGCG
CATGCTTGAAACAAAAACGAGGCTACGTGTTCAGCCAAAGAGCTGCCGGA
TTTAACAACATGCCGCAAGGCAATAACGTGACTGTCGTCAATAACCAAAC
TTCAACGGACGAGGGAGACTTTGAATACAGTGGAAAAGACATTTGTACTC
GTGATAACCCTATCCAATATTACCAGCCTACCGTCAAGATCAGTTACAGC
CAAGGGACTGATTGGAATAAGCGAGGCGTTGTTGTCGGATGGGTCGCTTT
CAAAGACCCTTATTACAAACAAAAACCTCATCAAGTGGAGTCATGGCAAC
ACCAAGCTGGCCCAATCCATCATATAGATCATCCTGCTCGTGGAAACTTG
ATCGTTCAAAATCTAACGGATATCTTATTCACGTTATGGACATTAAAGAC
CAAACTTATTCATCTTATTGTTCCTCTAGCGAACAACAAATAACGATCAA
AGTTGTGGTACGTGGCAAATGTCCAGAACAGAGATCGCAGAGTTTTGTTC
CGGAAATATGATCTCATCCCTCCCTCACGACATTTATGCGTATACAAATT
GTTTGAGATTGGTGGTCAAAAATCCAAATACTTATTCTTCAAAAGGCACT
TTTTCTGTTACTTGGGGTCGATATTCGTATGGATTGCCATCCTGCTCGTA
TTCATCGGTATGGGAAGCCAGAAAATTGGTTTGCTAGCAATGTTTGCTAT
ACTGCTAGTTTTGCTCACAGAAACTTTCGCTTATGAATGTGATACTGTAA
CCCGTTCGGGTACCTCTGGCTCTTTGTCTGGCGGAAACAAATATGGGTGC
AGTACAAAAACTTATGATATCAACCTTGGTACTACAATGGCTGTGAAATT
GACTTGGTTGACTTTTTATAATATCCCTGGAGATATGCCTTACTGTACTG
ATGGATATGTTAAAGTTTATGCGGACTCAACAACAATATGTTCCACCGCC
CCAACAAGGATATCCAGCACAACAACCAGCTTACCCACCACCCCAACAGG
GCGCTTACCCGCCGCCCCAACAAGGTGCTTATCCAAACCAAGGTTACGCC
CCACAAACACAACCTGGAGCTTATCCTCAACCAGGGGCATATCCGCCGCC
CCAGCAAGGATATCCGCCCGTCTCTCAACACGGATACGCTCCACCGCCCG
TTTATCAAGAATCTGCAACGCCCCAACCACAACCACCAGTCCAATAACTG
ATGTTGGAGCAATTGGAGGATACATTGCTGCAGGGATTTTGGTTCCCATA
TTCATACTTTGTATCATCGTGTGCGCATGCTTGAAACAAAAACGAGGCTA
CGTGTTCAGCCAAAGAGCTGCCGGATTTAACAACATGCCGCAAGGCAATA
ACGTGACTGTCGTCAATAACCAAACTTCAACGGACGAGGGAGACTTTGAA
TACAGTGGAAAAGACATTTGTACTCGTGATAACCCTATCCAATATTACCA
GCCTACCGTCAAGATCAGTTACAGCCAAGGGACTGATTGGAATAAGCGAG
GCGTTGTTGTCGGATGGGTCGCTTTCAAAGACCCTTATTACAAACAAAAA
CCTCATCAAGTGGAGTCATGGCAACACCAAGCTGGCCCAATCCATCATAT
AGATCATCCTGCTCGTGGAAACTTGATCGTTCAAAATCTAACGGATATCT
TATTCACGTTATGGACATTAAAGACCAAACTTATTCATCTTATTGTTCCT
CTAGCGAACAACAAATAACGATCAAAGTTGTGGTACGTGGCAAATGTCCA
GAACAGAGATCGCAGAGTTTTGTTCCGGAAATATGATCTCATCCCTCCCT
CACGACATTTATGCGTATACAAATTGTTTGAGATTGGTGGTCAAAAATCC
AAATACTTATTCTTCAAAAGGCACTTTTTCTGTTACTTGGGGTCGATATT
CGTATGGATTGCCATCCTGCTCGTATTCATCGGTATGGGAAGCCAGAAAA
TTGGTTTGCTAGCAATGTTTGCTATACTGCTAGTTTTGCTCACAGAAACT
TTCGCTTATGAATGTGATACTGTAACCCGTTCGGGTACCTCTGGCTCTTT
GTCTGGCGGAAACAAATATGGGTGCAGTACAAAAACTTATGATATCAACC
TTGGTACTACAATGGCTGTGAAATTGACTTGGTTGACTTTTTATAATATC
CCTGGAGATATGCCTTACTGTACTGATGGATATGTTAAAGTTTATGCGGA

Gene-mRNA-Prot

This transcript is a part of the following gene feature(s):


Feature Name	Unique Name	Species	Type
XLOC_003889	XLOC_003889	Clytia hemisphaerica	gene

The following polypeptide feature(s) derives from this transcript:


Feature Name	Unique Name	Species	Type
TCONS_00006966-protein	TCONS_00006966-protein	Clytia hemisphaerica	polypeptide

The following exon feature(s) are a part of this transcript:

Position

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
sc0000072	supercontig	sc0000072:613794..623890 -

Expression

Values :

    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
5.29483	4.63466	3.48183	4.67409	6.56604	4.34728	8.54468	9.05035	12.691	17.9202	31.6963	11.9367	125.986	104.428	82.9863	99.6247	62.8755	62.255	112.105	126.711	63.0406	71.0067	48.8154	52.8461	39.8929	44.0162	39.3078	36.3529	113.816	97.3926

Annotated Terms

The following terms have been associated with this transcript:

Vocabulary: **INTERPRO**
Term	Definition
IPR000859	CUB_dom

Blast

The following BLAST results are available for this feature:

BLAST of TCONS_00006966 vs. Swiss-Prot (Human)

BLAST of TCONS_00006966 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0


Match Name	E-value	Identity	Description

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TCONS_00006966 (transcript) - C. hemisphaerica