TCONS_00006944 (transcript) - C. hemisphaerica

Overview
NameTCONS_00006944
Unique NameTCONS_00006944
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length2872

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00006944 ID=TCONS_00006944|Name=TCONS_00006944|organism=Clytia hemisphaerica|type=transcript|length=2872bp
atttttaaaactcAGTTGGAAAGAAAGGAGTTTATTTGAGAAGGATGGGT
CGTATGCGATGTATCGTAAAAGGTTGCTACTCAAACCATGGTAGTGATCC
CAAACCTCAATCAAACAAAAGCGCAAAACAAGACGAACATATCAGATCAT
TTGGTTTCCCAAATAAAGCGCGAGATCCAATCATGAGGAAACTTTGGATC
AAAGCCATCCCGATGCTTCGCGAAGATCTGGTTAACAAAAGGTCGAAGCC
GGTCATCTGCATCAAACACTGGCCGGAAGGGTTCAAGTTCAAAATCGGTA
AAGGTGGTTTTGTCAGACCTGTTCATCCACCTTCGATTTTTCCAGAGCTG
ACTAAGGCTGAAATGGTTATCCTGCCCAGCAtggtgtcaaaaaagaaaag
gaaatctTCTAAAACCGTTGACAAAGCCGGGAAAGTCCGAAAACCATCGG
CACCGACTTTCACTGGCGCCCCTGCGATGAAGCTCCATTCGTTTGAATTA
AAGGACTCTCTGAAACGTAAAATGGGCACTCCTTTTTATTCAAATCACAA
CAACAATCATAATTGGCAGGACCTTCCAGCTATAAAGATTCCAAAGCTTG
CCGACTTAATTCCAGCTGCACGCTTCAAGCAAGATTTACCGACAACGTCA
TCGTCGAACCCTCGTCTTCCAACGACGACAAATTCCAACTTGATCCAAGC
ATGTTTCCAAAGAGATTTGTCGGCAAGTTCATCATCAAATACTCGTTTTC
CAACGACAAATTCAAGAGCACCGAATAACACTTTGTCGATCCTATCAAAC
CTTGTTTCCCGCTTTCCGTCTGCAACAACATCAATATCGGCGACATCATT
ATCAGAAAGCACAGATCTATCGTTGCCAACAATGGTGGAGATGTCAAACG
ACAAACCACGAAAACCACTTTTTATTCCATGCTCAAAAAGACAACACTTG
CAATTTCAAACAGTAGCCGAGAAGACATCAATGATGCCCCACAATGAAAT
GAATCGAGTCATACCTAATCGAACTCCCGATACCGATTCCGCTACAATTG
AAACGTACAAGAAAAAGTTAGAAGACTTTCAACAGCAAATTGATCTACAA
AGAAAATCTTGGCCCGATANGTACAAGAAAAAGTTAGAAGACTTTCAACA
GCAAATTGATCTGCAAAGAAAATCTTGGCCCGATAATCATGGGAATAGGC
GCAGTAATGCAGAACTGATCAAAGAATTTTCGAACCGGCTTTCAACCGAA
TACGGGAAAAAATTTCGACCAATTTTACCTAAAGGTGGACTTCAAGACCA
AAACCtggaatcaattttgaaagcttATTGGAAATGGGCATGCGCGACGT
GCATTTCAAAAGGGAAATCTGTGACCAGCACATCTTCAACGAAACAAGTT
CTGGTTATTGATGACAACGATGGTTCTGTCGGTTCTTCCAATGATACTAA
AGATGAATTACCAACACCCCAGTCCTCAGATGACACCATGATAGCGGTTA
ACTCGATTACTACCGTCTCTTCTATGGAAGTTATGCCTATCGTCTCTGCA
CCCCGACGCGCCGTGGATCCTACTCCTTCAGctTCACTGCAATCGTCAAA
GGTCGCCACACCACCCATCATCTCTGTCAAACCTTCCAATTTTGTTTACC
ACCCGTCTGGTCTCACTTACGCGCCCCTACCACCAGGCTCAAGTGCGGTA
ACCCTACCACCAGGACACCACCCTGTATCGATGCCACAACCACAGTTCAT
CCCTGTCAATTATATGCTTCCTAACGGGGTACCTGCTGCCCACCAACCCC
CGCACGGTGTCCCAGTACAAGCTTCGAGAGGTGTCACCCCTATGATACAA
CCTCCTCCAGCACACGTCGTTGGAACTGCACCGATCCCCAACCAGCCGAC
AGCCGCTGTGGCACCGCAAACGCAAAGTGTAATGGGGAAAGGTGTACGCA
ACGATCTCTCGCACATCTTGAATCCAAAAGTACCGCTTCCAGacgtACGC
TCATCTATTCGTGACGATGTGTTGAGAGCCTTACCGACCGATGTCGCTGA
TTGGACGGTACAGAATGTGGCGTACTATTTCAAAGCACATGGATATATTC
ACGAGAGTAAACTGCTGGAGGAACAGGAAATTGACGGTAGAGCAATGTTG
TTGATGTCACGAAATGATTGTTTAACTGGTCTACGTATTAAACTTGGTCC
TGCACTTAAGATCTATCACATGCATATTCACAAGCTTCAAAAGAAAACTG
ACTTTCTTGGATGAAGTTGATCAGTCGATGAAATCGGGAAGATGATCGGG
ATTTGTCTCTTAGACACCCTATTTTAACAGACCCGGTAGGGAGTAggaat
aacggactgaaacttgatgggattgatattcctatgtttttcatggctgg
ggatttgaattcaatTGGGGGATGGATacaatattttgcagcgagacttt
gtttatttaaatattttcagaagggacaaaaattgtattttccACTCGGG
AcgacattttggccattttttccagTAGGagaaaatcccaccgggtctgt
gaatATGGGGTGTTCTTAGTGACCTGGTAACTGGTAAAACGATGAGATCT
TCGGTGAGGAATGTGAGTGTTGGAAGTTTGGATATTTGTGGTACCAAAGA
AATTTCAGATTTCAGTCTGTGTATtcattttctgtttgttttttatacgc
tattatatttgttattttttataattcaaTTCCTCAAATCATTTGTTTGG
GAAAAAGTGTAAATAAATATTTAGTTCGTTTaatttttaagccattttca
TTAAGTAGTTGGTAGTAGCGTAGCGTAGACTCAGGTCAGAATCAAGAAAA
GAACTACATTATCGATTAAGga
Run BLAST on NCBI

transcript from alignment at sc0000072:435905..447946-

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00006944 ID=TCONS_00006944|Name=TCONS_00006944|organism=Clytia hemisphaerica|type=transcript|length=12042bp|location=Sequence derived from alignment at sc0000072:435905..447946- (Clytia hemisphaerica)
ATTTTTAAAACTCAGTTGGAAAGAAAGGAGTTTATTTGAGAAGGATGGGT
CGTATGCGATGTATCGTAAAAGGTTGCTACTCAAACCATGGTAGTGATCC
CAAACCTCAATCAAACAAAAGCGCAAAACAAGACGAACATATCAGATCAT
TTGGTTTCCCAAATAAAGCGCGAGATCCAATCATGAGGAAACTTTGGATC
AAAGCCATCCCGATGCTTCGCGAAGATCTGGTTAACAAAAGGTCGAAGCC
GGTCATCTGCATCAAACACTGGCCGGAAGGGTTCAAGTTCAAAATCGGTA
AAGGTGGTTTTGTCAGACCTGTTCATCCACCTTCGATTTTTCCAGAGCTG
ACTAAGGCTGAAATGGTTATCCTGCCCAGCATGGTGTCAAAAAAGAAAAG
GAAATCTTCTAAAACCGTTGACAAAGCCGGGAAAGTCCGAAAACCATCGG
CACCGACTTTCACTGGCGCCCCTGCGATGAAGCTCCATTCGTTTGAATTA
AAGGACTCTCTGAAACGTAAAATGGGCACTCCTTTTTATTCAAATCACAA
CAACAATCATAATTGGCAGGACCTTCCAGCTATAAAGATTCCAAAGCTTG
CCGACTTAATTCCAGCTGCACGCTTCAAGCAAGATTTACCGACAACGTCA
TCGTCGAACCCTCGTCTTCCAACGACGACAAATTCCAACTTGATCCAAGC
ATGTTTCCAAAGAGATTTGTCGGCAAGTTCATCATCAAATACTCGTTTTC
CAACGACAAATTCAAGAGCACCGAATAACACTTTGTCGATCCTATCAAAC
CTTGTTTCCCGCTTTCCGTCTGCAACAACATCAATATCGGCGACATCATT
ATCAGAAAGCACAGATCTATCGTTGCCAACAATGGTGGAGATGTCAAACG
ACAAACCACGAAAACCACTTTTTATTCCATGCTCAAAAAGACAACACTTG
CAATTTCAAACAGTAGCCGAGAAGACATCAATGATGCCCCACAATGAAAT
GAATCGAGTCATACCTAATCGAACTCCCGATACCGATTCCGCTACAATTG
AAACGTACAAGAAAAAGTTAGAAGACTTTCAACAGCAAATTGATCTACAA
AGAAAATCTTGGCCCGATANGTACAAGAAAAAGTTAGAAGACTTTCAACA
GCAAATTGATCTGCAAAGAAAATCTTGGCCCGATAATCATGGGAATAGGC
GCAGTAATGCAGAACTGATCAAAGAATTTTCGAACCGGCTTTCAACCGAA
TACGGGAAAAAATTTCGACCAATTTTACCTAAAGGTGGACTTCAAGACCA
AAACCTGGAATCAATTTTGAAAGCTTATTGTAAGGAATTTATAACTATTG
TCGTACACTGTGTTAACCGGTGCAACCAGAGATTAAAAGAACTAAACCCT
TAAGTAATTTCAATCGCCAAGGGAGTTGTGTGATTGCATTTTTTTTTACT
GTAAATTTTATGGTTAAGTAATTTTAATCAGTTGTTTGTTTGCATTTTTG
TTTGACTGTAATTTATGGGGTTTAAGGCGAAGCCCTAATGTCTGCATTCC
AAAATTGAAAGTTGCTTAGCTTTTTTATATTTTCCCAAACATTTTCTTGG
CATTTTGGCAACATTTTGTGAAGAAAACCATTTAATAAGTTGTTCTAGAT
ACTTTATTTTGACACAATTCTCTCTCTGTAAAATTCTCTTCCTTCATTGA
AACAATAGTTTCTTTCTTCACTTTCGACAGGGAAATGGGCATGCGCGACG
TGCATTTCAAAAGGGAAATCTGTGACCAGCACATCTTCAACGAAACAAGT
TCTGGTTATTGATGACAACGATGGTTCTGTCGGTTCTTCCAATGATACTA
AAGATGAATTACCAACACCCCAGTCCTCAGGTACAGAGAGTTTTATTTCT
CTTTGTTTTTACAAAGATACTAAATATGCATTGCCGACACCTCAGTCCTC
GAGTCAGTTTTAAAACTTCCGTCTCGGCGAAGTATACAAAGAGGTCTTTC
CGCCTAATCCTGCATAATTCACCTAAATTTTTCCATAAACGTGTACTAAT
TTGCTGTTTAAAATCTGTTTCACACAAAAAACCTTGCGTTGGCCATTGTC
ACATAAAGAGAGCTTTTATTTTGTCAATTACAACAACAAGCAAATTTACA
ATATATCTCTTGTTCGGCTTGAAAGTCGGCATATAGTCCCGCTGCTGAGG
TCGATAAATGTTTCATTTCGTGACACACATCTTAGAACTAACTTTTTTTG
GTGGAAACTCGCGAATTAGTATATTTAGATTCCAAAATCAAAAAGTTTCC
ACGATATTATCGTGCAAGTAACGAGTAATTGGCGATTTCCAGGCAAAATT
GCAAGGCCTGAAAATTCATGATTTTTGGGGGGTCTTCAAATTAAAAAAAA
ACCTATATCACACGATAGAGCTCTTCAAACTGAGCAAAAGAGTGTATTAC
ACCAAAGTCCCAACTTCTCTAGATCAAAAGTTATTATGGGCCTATTTGTG
GTCAAAAACTGATGGAAAACAGGGAATTTCCCCACAATCTGCATTAATTT
ATGCAAAATTAAACACCTTTTTGACCAAAAATAGGCCCATAACTTTTGAT
CTAGAGAAATTGGAACTTTGGTGTAATACACTTTTTTGCTCAGTTTGAAG
AGCTCTATCATGTGATATAGGTCTTTTTTTAATTTGAAGACCACCCAAAA
ATCAGCCACTTTTTTCGATCTCAGCAGCGGGACTAATAGGGTAGGTAAAC
ACATGCTTTGGCGATTGAAAGTAAGTGGTGTCTTGGCTTCGAAGTACCTT
ATCGGCCAAAACTTATTCGGCCTTATTTTTAGTCGGCCTTGATTATTAGT
CGGCCCTATCCTAATTTTAGTCACCTCGTCAAAATTTAGTCACTAAGGGC
CGACTAATAATTAAGACCGACTAAAAATTTGGTAATACCGATATGAAAAG
TGGGTTAAGGAAAGCTTAATTATAAACTTTTAATATAAACTTTTAACTTG
GCCCAAATTTTTAGTCGGTCCCAATTTTAGTCACCAATCCAAAATTTAGT
CACTTAGGGCCGATTAAGTTTTGGCTGATAAGATAAATCATTGAATAAAC
AAAGCGGCGTAGTCGTTGACGTTTCATTTTTGGTACTTGGTACCCAGCCT
CTTAAGAGCCATTTTCTGTAAAAATCAGGCAGAATCAGGCAGGTCGAGGA
AGTGATATCCTCAGATTTTGCCAATTTTTGGATATTTTGCTCAAATACAT
GAAAATAACATCCTGTAAAAATTTTTTTGATAAATCTTTGACTTCAAGAG
CAATTTTAAACATGATCAAGCCTAAGATTCATTTCAAATCATATTTTCCT
GGAAGAAATCCATGAGTACTTTGAAAAAATGGCATTTTGAGAATTTTCAT
GTGACATTTAAGGCCACGCCCTAAAATGGCGGTTAAAGATAGCTTTTTGT
AAATTTTTAGTATTTTCAATGAGCTTTTAAAGCCATGGCCATAAGTTCCA
CCACTGAAACAAACCATTTTTAGTTAGTGTTTTGGCCATATTACCCAATT
CTAAAATCAAACCCATGTGCTCCAATACCATTTTTGCACAGTTTATCTTC
AAAAATATTTTTAAGTCATCAAGACTTAACCAATTTTTCCCTTAGCAACG
CATTGTTTTCCCCTAGCAACCAGGCATCCAGCTTTATCAAAATTTTCCAA
ACTGTCTCCTAGTGGTTCCAGATCATGGTAAATGTCTTAGATTGCAGTAT
CAAAGTCTTGGACACAACTTTCACTGAATTTTAGGGCAAATTAGGGTCGC
AGAGACAGAAATAGCAGACCCCAACAGGTAACGAGGAAGCAACTTTGGCT
GATGCTTGTTGCAAAACCCTAAATCAAATCAAATTGATTCTAATGTTTTT
AACATTATTGCAGAGGAAATACTAAGAGAAAATTAAGTGGGGGTACTAAG
CATAGAAGTTGAAGGTTCTTTTAACAGGTGAAATGAGGCTTTTGACAAGA
AATTTCACCACTAAGGAAAAACGCTAATCTCTTGTTTTTCATTGTTTTCA
AATGCTAAAAATTATTTGCAATTGATCTTTAAAGGGAAGTCTCTTCTTGC
ATTCCATACCTTTGTACTGTTTTATCATTATAGATACTTACACAGACCTA
GTAAAGAACTTTGAAAAAAGTTATACTGCCTTACAGATGGACTCTAAGAG
GAGGAGAGGATACAGAATTTACTGTAGTTAAAGTTCATCTGAACGAAAAA
AGATTTTTCAAAAAAAATTTTACAGGATGTTATTTTCATGTATTTGAGCA
AAATATCCAAAAATTGGAAAAATCTGAGGATATCACTTCCTCGACCTGCC
TGATTCTTACAGAAAATGGCTCTTAATGTTTGATGGGCATATTGCTTAAA
GCAGTGGGCCGTCGTAAAAAATGAGAGCCTAAGAAACAATTTCAATTCCA
TTATCATTCTCCATAGATGACACCATGATAGCGGTTAACTCGATTACTAC
CGTCTCTTCTATGGAAGTTATGCCTATCGTCTCTGCACCCCGACGCGCCG
TGGATCCTACTCCTTCAGGTATGTACCACCTTTGTGCTGTTCATAACCTA
TTTATTACATATTTATTAGTTCGTGTTAACGACCCTTTAACCATAGCGTT
AGAAAAAGATTGCTCGAGATTACTTCAATATGTTTCCGTTACTCGTGCTG
ATTGTCTTGTCCCTTGAGTGAGTCTCAAGCTTTTAATCTCCTAATTCTTT
TCATTTTTCCAGCTTCACTGCAATCGTCAAAGGTCGCCACACCACCCATC
ATCTCTGTCAAACCTTCCAATTTTGTTTACCACCCGTCTGGTCTCACTTA
CGCGCCCCTACCACCAGGCTCAAGTGCGGTAACCCTACCACCAGGACACC
ACCCTGTATCGATGCCACAACCACAGTTCATCCCTGTCAATTATATGCTT
CCTAACGGGGTACCTGCTGCCCACCAACCCCCGCACGGTGTCCCAGTACA
AGCTTCGAGAGGTGTCACCCCTATGATACAACCTCCTCCAGCACACGTCG
TTGGAACTGCACCGATCCCCAACCAGCCGACAGCCGCTGTGGCACCGCAA
ACGCAAAGTGTAATGGGGAAAGGTGTACGCAACGATCTCTCGCACATCTT
GAATCCAAAAGTACCGCTTCCAGGTTTGTACGGGCGAAATTTATTAACAT
GAACTTTAATAACTAGAATGTTCTGGCCTCCTTGAGGTAGGCAGGGGAAA
TTGTCCGGGAAATTGTATTGTATTGTATTGGCTAATTCCGCTGGACTATT
TCTACAGAATACAAAGTTGAAGTTTTTCTATCATATCAGCGTTTAATTTT
ACGGTTAAAACGAAAAACTAAATTCTAAAGTTAGGGTTCATTTTTTACGT
TTAATTGGATTATTTCTGTTTTGGAAGATTTTCTGTCAGATCTTATCTTT
TTTTTAAAAGCTTTTCTATTTTTCTTTACCGATGGATCATTTTTTACAGA
TGGAAAATTTTTATCTCAAATGGGGTTTTTTATTTTTGTCTGAAAAGTGA
GTATTTTGACCTGAAAGACGACCTTTTTCGAAGAACACAAATTGTAGCTG
AAACCCTAAAGACTTTTCAGTCATAATAAAACTTTTCACCAGAGCAATCG
TCATTTTTTTCGGGACAATGTTTTTCAAATAACTTAAGTTCACCTAACAA
TTTGTTTTTTTTTTTCAGACGTACGCTCATCTATTCGTGACGATGTGTTG
AGAGCCTTACCGACCGATGTCGCTGATTGGACGGTACAGAATGTGGCGTA
CTATTTCAAAGCACATGGATATATTCACGAGAGTAAACTGCTGGAGGAAC
AGGTTTCTTAGAATTTTCTCTCTCCTTTTTTAAGTTGCGTGATCATTTCC
TCGTGTTTTTTACATTTTTATAGACACATGTCTCGTGATAAGCGACAGTA
CTCCCACCCTTTAAGACTTTGCGTCCCCGATGAGTGTCCCCAGGGCAAAA
AAGCAAAAAAAGTCGATGTCGTCCAATTCTAATGAAATTACGAATATAAC
ACAATNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNGTAGAACAC
GAATATGAAACTTAAAATTCTTCAAAAGTCCTGAAATACCCTCAAAAAGG
GGGTTTTGGGCCCAATTCTGGGCTTTTGGGGCAAAAAATGACCCAAAATT
TAAGTTTCTCCAATTTTGATGAAACTTTCCACTTTTATCCAATTTTTCAT
GTAGAACACGAATATGAAACTTAAAATTCTTCAAAAGTCCTGAAATACCC
TCAAAAAGGGGGTTTTGGGCCCAATTCTGGGCTTTTGGGGCAAAAAATGA
CCCAAAAATTAATTTTTTCCAATTTCGACGAAAATTTCCACTTTTATTCA
ATTTTTCATGTAGAATACGAAAACAACACTCAAGTTTTATGAAAACCCCC
TCGAGACACCCCTTATATAAGAGGGTTTATGGTCCAATCTTCGTCTTTTC
AGGGTTTAAACAAGACCCAACAGTCGAGCTTCTTTAATTTTAATGAAACG
TGAATTAACAAACATTTTTATTGAATAATTTAAAATTACACTCAAAATTA
ACCCCAAAATTGCACCCGTAAAATGGTTTCTTGTCTAAACATTAGGCTGT
CAGTAATACAAAATAATAATCAGAGGGTCCAATTTTTCTAATTCAACCTG
CTTTTAGTCCCAAGGTTAATATTTTTGCTGTTTCCAAACAAATTCTATGG
ACTGAAACAGTTAGATAACATTTTTTCGTAAACCCCCTAGTTTTTGAGAT
AAACGAGTTTAAAGATTTTTATTCCTATAGAAAGCACTGTTATTGGCTAG
AAGTGATGAGCTATTTATGAAAATAGACTGAATATATTCTAAATGTGTGA
ATGTTTTCTGATGATGATTTAGGAAATGAAGATTTTTGGAAATTTTAGTT
TGATTGGCAATTTTTCCAGATTTTGGTTTAAAAGTCCGNGATAAGAATGG
GGTGGACCGTCAATAAAATTGCTGATCAGGGAGAACTTGGTGGATATTAC
ACATACAATCACTTGGTGAAGGTCGGCAAGCAAACGTTCACAAACACGGG
CTCAGGAAAAAATTACAACACCGTTGAGCAACTTTTAGAGGGGTTAAAAC
ATATGGGAAGACTTGTGGTGATGGATAGTAGATTTCCAACTATTCAACTT
TTGAAAGATGCAGCTAGCATATGGAACACCAGAATCATTGCTACTGTTTG
TGGAAATACGGCCCATCTTCCAAAGAAACACGGTTCATTTCTAAAGAATA
CCAAATCCTTTGTCAGAGGATACTCACAGTCCCTGCATCACCAAAATTTG
AATTTGACATATTGGAACGATAATAATGCAGTTTGCTTCCTTGACAATGA
TGTTGATTCTGCCAGGGAAAACTGGTCTTCAATTGAGGTGAACGGACAGG
CCATTCACACTCCACCCTCAGTGGTTTTGTATCGCCAGATTTATGGGATG
GTTGACCGTACAAACCAACATCAAGCATACTACAACAGCGAGTTTCGTAG
TGTTCGCAAACAGAGCCGAGTGCTTGATTCGTTAATTGAGACATACGCGT
TGTGTAATACCTTCACAATCTGGAAAAATCTTCATTCCATCACGGAAAAG
CAACGGCTATATTCGAGCAGCGAGTTCAGATTTGCTGTTATTCGTAACTG
GTACGCAAAATGCAGAATGCACAATAATAAGGACAAACTGTTACGAAACC
CATCATCAAATGTCTCAAAAAGAAGAAAAGTTGAAATGAGCGTGTTATCA
CCTCGTAAAGGTAAAAGTCATAAAAAATTAGTTTCTCCTAAATTCCTGAA
AAGCGTTAAAGGTTTCATCTTTCCCTCTTGCTTGTTTAAACTACAGTCAC
GTAATTACTTTTTAGATTTTTAAACTCTATTTTGGATCTGTTTAGCTTGT
TGAATAGTGTTTCAGTGTGATCATGTCACATTATTTAGAAAAAGTGAATA
TTTAAACAATTACACTAATTCATATTCAAGGTCGACATTCAGAAGCTAAG
CTCACAAAAGACGACGCTCCAAATAAAGAGCAAAGATTGCGCTGCCGGAT
TTGCGGAGCAAAAACCCGCACAAAATGTGACAAGTGCTCACAACCGAACG
AACCACTTGCTCTTTGCTCATTTAATCAACGAGGTTGTTGGAATGAATAC
CACAAAAAGCGAGAATTTGATGTTGCGAGCAGCCAGTCTCAAGATGACGT
TTGAATTTGATATTGAGAATCCTATTTCGTTAAAGCTTTTAAAGTAATTT
ATCGTTTCTCTTCACCTTTTGGTTTTAAAGGAATAGATTCTATGAGAATA
TCAGGGTGAGATTTTTGGTTTAGAACGATATTGGTCTATGCTCAAGCCAA
AGTGCACTATTGGCGTCAAAAAACGCGTATGAGAGTGTTTTCATTTGACA
AAGATTGAGATTCTCAGTATCATCGGTTTATACAACGATTTTCTATCATA
CACTTCTGTATATAATTTCTAAATACATAACTTGTAGTTAATTTTCATAA
CTGTTACTTTTGGTGCATTTTCCTTACAAATGATTTATTGTTTGAAAAGT
TTCGATTACTTTTCATTAGTGTATTATTAGTATAGTATATATACGGAATA
TATGATTGATATATGACTATGAACTGGTATTGTTGTAAAGTTGTTTTTTT
ATGTGTGATAGGAATTTAACTATCATTTTCAATATTATTTCATACTTCTC
TGTTCAATCAAATTATGTTACATAGCTTTCCAGGGTTACTTAGACAACAA
GAACACGTTAGATGAACTTAATTATACCCCTGTCTCGCCAGAACACATTA
TTTTTAGCTGATTGATTTTCGAAGTCTGATCAGAACAAATTAAAATTTCT
AGCTGAAATATGCTCTCAGAACACATCGGAAAAAAAGGTCGCCTCGCCGG
CTGCTTTCACGGACTGTTTCTCTGAAACCCATCTGATTTTCCTTTTATGG
AAGAATTTTCGTATTCTACATAAAAAAATGGATAAAAGTGGAAAGTTTCG
TCGAAATTAGAGAGACTTCATTTTTGGGTCATTTTTTGCCCCATAAGCCC
AGAATTGGGCCCAAAACCCCCTTTTTGAGGGTATTTCAGGAATTTTAAAG
AATTTTGAGTTTCATATTCGTGTTCTACATGAAAAATTGGATAAAAGTGG
AAAGTTTCATCAAAATTGGAGAAACTTAAATTTTGGGTAATTTTTTGCCC
CAAAAGCCCAGAATTGGGCCCAAAACCCCCTTTTTGAGGGTATTTCAGGA
CTTTTGAAGAATTTTAAGTTTCATATTCGTGTTCTAAATGAAAAATTGGA
TAAAACTGGAAAGTTTCATCGAAATTGGAGAAACTTCATTTTTGGGTCAT
TTTTTTGCCCAAAAAGCCCAGAATTGGGCCCAAAACCCCCAATTTTACCC
TTTATAAGACCCAAATACACAAAAAACAATATTGCCATTCAATTCTACAC
CATTTAATTGTGTTATATTCGTAATTTCATTAGAATTGGACGACATCGAC
TTTTTTTTGCTTTTTTGCCCTGGGGACACTCATCGGGGACGCAAAGTCTT
AAAGGGTTAAGGCTCTACCCCGGTTGAACTTTGACTCTCGGAGTAGCAAA
GTCTAATAGCAGTGGGAAGGATGGTTGAATTAGGACGACAGCATTGGGAC
ACGAGAAAGAAACTTTCAGAAAGGATTCGAAGAAAATCTTTTTTCAGAAA
AAGGTTAAAAGACAACCAAGAAAAAAATATTTGATTTGCGAAAGTAATTT
AATTTTATCTGCGTTCTTTGCTGCAAATGCTAATGAATAATAGCAGCTTT
CCTACAATATTCATCCGACTTTTGCGAGTTTCTGCATTCTGGAGTGTTTT
TCACCATTTACTAGTCTAGCATACTAATTCGGAATAAGCAAAAAAAAACA
ATGGAAAGGACAAATTTTAGTTGATAAATATTGATATTATCCCGTAACAA
TTATTGCATTACCGTATAACACGTATATTACTGTATTACACGGATTATAT
AAAACGAATTCAGTGTATTTACCTTCCCAAACGAACGTATTGTAATATCT
TGATAAAATCTTGGTCGTTTTGTCTCTTGACTTGCGTTAATGATTGAAAA
GGTGTGGCTTAAAGATTTTGTTTCATTATTTTACCTTCGAGTCTAACATG
TTCGACGAATAATTCAGACATAGTAAAAAACAGGCAATAACTAATGGAAT
GGACAAACTGATATTATCCCGCAACAATTATTGCATTATCATATAACACC
CATATTACTGTATTACACGGATTTTAAACGACTCCAGTCTAATTTTTGAT
TGATTTTATTAATCGATTCATAACTGGCATTAACATATAGCATGGCCCTT
ATTTCAGAATTAATATTTTCAAGCTATGAGTTAAAATCTCTAAGAGCAAC
ATTTAAAACCAGACAAAGGTTTCACTTAATTACTAACCAATTAATACCTT
CATTTTTATTACTAATTGAATGAGTTTCAAATAAAGAATTTTCTTTTATT
TCAAAATCGTCATGTATGATTCTTCCTCAAATCGTAATTGCTTTTCATAT
CCGTGACAGCTCTGGAGGAGAGCATCTACGTAGGACGACGCTCCATCGTA
GATGAAGTTTTGAGGATGTATAAGGGATTTCCATTACGGTTTAACAGCGG
ATTGAAAAATTCATTTTCCTGATATTCCTAACGTCATAAACTGATTTTAG
CCCGTAACAATTATTGCATTATCGTATAACACCCATATTACTGTATTACA
CGGATTATAAACGACTCTAGTCTAACCATTTTTCGAACCCTCATAGGAAA
TTGACGGTAGAGCAATGTTGTTGATGTCACGAAATGATTGTTTAACTGGT
CTACGTATTAAACTTGGTCCTGCACTTAAGATCTATCACATGCATATTCA
CAAGCTTCAAAAGAAAACTGACTTTCTTGGATGAAGTTGATCAGTCGATG
AAATCGGGAAGATGATCGGGATTTGTCTCTTAGACACCCTATTTTAACAG
ACCCGGTAGGGAGTAGGAATAACGGACTGAAACTTGATGGGATTGATATT
CCTATGTTTTTCATGGCTGGGGATTTGAATTCAATTGGGGGATGGATACA
ATATTTTGCAGCGAGACTTTGTTTATTTAAATATTTTCAGAAGGGACAAA
AATTGTATTTTCCACTCGGGACGACATTTTGGCCATTTTTTCCAGTAGGA
GAAAATCCCACCGGGTCTGTGAATATGGGGTGTTCTTAGTGACCTGGTAA
CTGGTAAAACGATGAGATCTTCGGTGAGGAATGTGAGTGTTGGAAGTTTG
GATATTTGTGGTACCAAAGAAATTTCAGATTTCAGTCTGTGTATTCATTT
TCTGTTTGTTTTTTATACGCTATTATATTTGTTATTTTTTATAATTCAAT
TCCTCAAATCATTTGTTTGGGAAAAAGTGTAAATAAATATTTAGTTCGTT
TAATTTTTAAGCCATTTTCATTAAGTAGTTGGTAGTAGCGTAGCGTAGAC
TCAGGTCAGAATCAAGAAAAGAACTACATTATCGATTAAGGA
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_003884XLOC_003884Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00006944-exon-sc0000072-1575043694:446618..447946TCONS_00006944-exon-sc0000072-1575043694:446618..447946Clytia hemisphaericaexon
TCONS_00006944-exon-sc0000072-1575043694:446067..446216TCONS_00006944-exon-sc0000072-1575043694:446067..446216Clytia hemisphaericaexon
TCONS_00006944-exon-sc0000072-1575043694:443379..443480TCONS_00006944-exon-sc0000072-1575043694:443379..443480Clytia hemisphaericaexon
TCONS_00006944-exon-sc0000072-1575043694:442774..443184TCONS_00006944-exon-sc0000072-1575043694:442774..443184Clytia hemisphaericaexon
TCONS_00006944-exon-sc0000072-1575043694:442095..442228TCONS_00006944-exon-sc0000072-1575043694:442095..442228Clytia hemisphaericaexon
TCONS_00006944-exon-sc0000072-1575043694:435905..436650TCONS_00006944-exon-sc0000072-1575043694:435905..436650Clytia hemisphaericaexon
TCONS_00006944-exon-sc0000072-1510915933:446618..447946TCONS_00006944-exon-sc0000072-1510915933:446618..447946Clytia hemisphaericaexon
TCONS_00006944-exon-sc0000072-1510915933:446067..446216TCONS_00006944-exon-sc0000072-1510915933:446067..446216Clytia hemisphaericaexon
TCONS_00006944-exon-sc0000072-1510915933:443379..443480TCONS_00006944-exon-sc0000072-1510915933:443379..443480Clytia hemisphaericaexon
TCONS_00006944-exon-sc0000072-1510915933:442774..443184TCONS_00006944-exon-sc0000072-1510915933:442774..443184Clytia hemisphaericaexon
TCONS_00006944-exon-sc0000072-1510915933:442095..442228TCONS_00006944-exon-sc0000072-1510915933:442095..442228Clytia hemisphaericaexon
TCONS_00006944-exon-sc0000072-1510915933:435905..436650TCONS_00006944-exon-sc0000072-1510915933:435905..436650Clytia hemisphaericaexon
TCONS_00006944-exon-sc0000072-1491911889:446618..447946TCONS_00006944-exon-sc0000072-1491911889:446618..447946Clytia hemisphaericaexon
TCONS_00006944-exon-sc0000072-1491911889:446067..446216TCONS_00006944-exon-sc0000072-1491911889:446067..446216Clytia hemisphaericaexon
TCONS_00006944-exon-sc0000072-1491911889:443379..443480TCONS_00006944-exon-sc0000072-1491911889:443379..443480Clytia hemisphaericaexon
TCONS_00006944-exon-sc0000072-1491911889:442774..443184TCONS_00006944-exon-sc0000072-1491911889:442774..443184Clytia hemisphaericaexon
TCONS_00006944-exon-sc0000072-1491911889:442095..442228TCONS_00006944-exon-sc0000072-1491911889:442095..442228Clytia hemisphaericaexon
TCONS_00006944-exon-sc0000072-1491911889:435905..436650TCONS_00006944-exon-sc0000072-1491911889:435905..436650Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000072supercontigsc0000072:435905..447946 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
1.0668	1.41033	1.44778	1.3194	0.143258	0.11674	0.168834	0.0668875	0	0.056365	0.105698	0.0360943	0.318945	0.356774	0.198176	0.047154	0.13043	0.200258	0	0.0892226	0.0278886	0	0.135218	0.178393	83.0185	70.721	0.164386	0.0913183	0.190436	0.495515
Blast
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BLAST of TCONS_00006944 vs. Swiss-Prot (Human)
Match: SAM13 (Sterile alpha motif domain-containing protein 13 OS=Homo sapiens GN=SAMD13 PE=2 SV=1)

HSP 1 Score: 86.2705 bits (212), Expect = 4.406e-19
Identity = 39/80 (48.75%), Postives = 56/80 (70.00%), Query Frame = 3 
Query: 2007 IRDDVLRALPTDVADWTVQNVAYYFKAHGYIHESKLLEEQEIDGRAMLLMSRNDCLTGLRIKLGPALKIYHMHIHKLQKK 2246
            +++ +    P D ADW V +V  YF+  G+  ++   +EQEIDG+++LLM+RND LTGL++KLGPALKIY  H+  LQ K
Sbjct:   36 VKNSMENGRPPDPADWAVMDVVNYFRTVGFEEQASAFQEQEIDGKSLLLMTRNDVLTGLQLKLGPALKIYEYHVKPLQTK 115
The following BLAST results are available for this feature:
BLAST of TCONS_00006944 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
SAM134.406e-1948.75Sterile alpha motif domain-containing protein 13 O... [more]
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