TCONS_00006908 (transcript) - C. hemisphaerica

Overview
NameTCONS_00006908
Unique NameTCONS_00006908
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length1688

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00006908 ID=TCONS_00006908|Name=TCONS_00006908|organism=Clytia hemisphaerica|type=transcript|length=1688bp
TTAAGATGGAAAGTGTTTGAGGTCTGGGACCAAGCACCTGATTGTAATAA
TGTTTATGTTCGAATCTGGATAGGATGTCCTGGATCCTTGAAAATGTTGA
CACGATTTTGTACGATGAACGATTCAAATATCATACCACCTGATCTCTAT
TCGAATGATCATtgtatgaaaattgaatttaataCACTCTCTACTATGAC
AAAATGGAATCGCGGTCGATTTGTAGCAGAATATAAACAACTCCTGTTCA
ACCAATCTTTGGAAACAACCAAATGCGAAGATATGGATCTATCTCGTAGA
TCAATTCACTCTACCAACTATCCGTTACCGTATTACGGACAAGGGAATTG
TAAATTTACCTTATATTTTGGTAACAAGAACATTGCAGGAGTTAAAGTCT
TGTTTACGAAGATCGATACAAGTACACCGTATTCTGGTGCCAAATTATGT
ATGGTTGAACAAAACGACTATATAAGGATGAAAAATGTGAAGAAAACAGG
ACAAATTCAATACTATCGGTTTTGTAGTACCCAAAAATGGCCGTTCACCA
GAATCTACTGGAAAACCAAACGACTTGAAATCACCATGAATACCCCTGTC
AAATGGAACAACCGAAACAAAGGATATATGATCAGTTATTTCCCAATATG
GAATTCAGCGGCCGCGGCGGATGCTGAAAAAGATGAGGAAAGTGGTGGTC
TGGCGACAGGTTGGATTGTCTTTCTGGTCATCTTAGGAGTCGTAACATTA
TTCATCATATATATAAAACGAAGATGGTTTAAATGGAAATGTAAAAAAGC
AAGATGGAATTGTTTGAACTGTTGTTATGGAGTGAAAGATAATATGATCA
AACAAGACGAGCCGGAGACTGTTTCACCAGCCTTTAATCCACCGGGAATC
GTCGTTGCTAGCTACACTGCTCCACAAAGTGAGAATCCTTCTCCATACCA
ACCACCTACATACAAGAATTATTCATCATTTGAACAATCTCCACCTCCTA
TGGGTGCAACACCACCAACTCAACATTCAGCCTCCGCCCCTTACCAATCG
CCCTCTGCACCACCACAATCACCAACCGCCCCTGGAGATGGACCGCCCCC
GTTTCCACCCTCCTATAATGACTCGATGGGAGGAGTAGATACGGAACGAA
AGGTTGGATTTATGTAAGGCGAAGTTTCGATGGgaacatctttttttttt
ttacaatagatcttatcggagtttttgattttttaaaaaaagcgatgtat
tgtgggattgtttctggttgattacaatagaattccctcgaggaattcca
aAAAGATTTCTATTGTTATACCCTCGAAACGATCCCACAATGCAtgtatt
ttttaggaaaatcaaaaactccgataaggtccaTTCCTCTGGCACATTGA
ATATTAATGAATGAAATGAATCTTCTCTGACTCAAGAGTGCGTGGAACAT
TACTCTTTTCATATTTTCTACGTTTGTTAAGTTTGGTTTGAATGGTTAGA
CCAATGTCCAAGTTCATGGATGATTGTCATGGTTGCTTTTTTCTCATTGA
ATGGGCGCTGAGTGGAATGGCGATCTTTCACCACAGTGTAATCTtcatgt
acagggtgtcccgaaaaaaagtatcgagttcgaacatgattctgagtaga
agatTGTTGCGTGTCTTtcacaaaatgtaagaaaatat
Run BLAST on NCBI

protein sequence of TCONS_00006908-protein

>TCONS_00006908-protein ID=TCONS_00006908-protein|Name=TCONS_00006908-protein|organism=Clytia hemisphaerica|type=polypeptide|length=388bp
LRWKVFEVWDQAPDCNNVYVRIWIGCPGSLKMLTRFCTMNDSNIIPPDLY
SNDHCMKIEFNTLSTMTKWNRGRFVAEYKQLLFNQSLETTKCEDMDLSRR
SIHSTNYPLPYYGQGNCKFTLYFGNKNIAGVKVLFTKIDTSTPYSGAKLC
MVEQNDYIRMKNVKKTGQIQYYRFCSTQKWPFTRIYWKTKRLEITMNTPV
KWNNRNKGYMISYFPIWNSAAAADAEKDEESGGLATGWIVFLVILGVVTL
FIIYIKRRWFKWKCKKARWNCLNCCYGVKDNMIKQDEPETVSPAFNPPGI
VVASYTAPQSENPSPYQPPTYKNYSSFEQSPPPMGATPPTQHSASAPYQS
PSAPPQSPTAPGDGPPPFPPSYNDSMGGVDTERKVGFM
Run BLAST on NCBI

transcript from alignment at sc0000072:669122..676594+

Legend: exonCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00006908 ID=TCONS_00006908|Name=TCONS_00006908|organism=Clytia hemisphaerica|type=transcript|length=7473bp|location=Sequence derived from alignment at sc0000072:669122..676594+ (Clytia hemisphaerica)
TTAAGATGGAAAGTGTTTGAGGTCTGGGACCAAGCACCTGATTGTAATAA TGTTTATGTTCGAATCTGGATAGGGTAAGTGATACAACTGCATTTCTTTT TTAAACACGTCCCACTAATGGGCAAAATTATCGTCCCATTGGAATATATA TTTTCCATATATATAAGTTCCATTTGAGAACGAGACGGTTGTCACGATTA ACGATTAAAACATGAGACATGGATATTATTATCATCGAGTTTAAAggccc gaaggggctagagagaAACTTAGAAAACTCCCACgcatggtttttacaca aacgccgaattgaaagtaaaatctatcgctagatttcataAAATGCTCAA AAGCAAAGAGACTACTCCGTCCCTTGGAGGATACAATCCGCGTCCCTTGG AGGAtgcaatccgtcgtcatgattgcggggtattctaggcgcgttctgga tgggaaataaatggtTCACTTTTtattgcctgagaaaggttagagatttt aCTCTAGCCGCTCGGGCTTtaaattcaatgattttttttaaatcttcata gATGTCCTGGATCCTTGAAAATGTTGACACGATTTTGTACGATGAACGAT TCAAATATCATACCACCTGATCTCTATTCGAATGATCATtgtatgaaaat tgaatttaataCACTCTCTACTATGACAAGTAAGTTTTTTGCTTGGGCCC TGGTGAGTCGTTTGAAGTGAGAGAGCCAAAATTTTGTGCCGAAAGCATTG TCGCCTCTTCCATGGTTAAGCGACGAAGAATTCAACTTTTCAATAACAAT AGTTTTTTTTGTCTTAACTATAAAAAGATTAACTTGGCCATAAACCTTCG AAGAATACAGTACTTGACAAGTTTTTACATCTTCTAAACCATTAAAACGC TATTCAATTAGATAAAAACAGGTTTCGACTTAAAAAGAGattattcttca aaaaaaatgagTTGGCGTTTGACGAGGCCCATGACGAGGCCCATGAGTTG TTTCTCGATGTTATCTAAAAATTTTGCCAACGTATctatagcctagaaat ctaagctagtttgctTGTTTAGTTGTGGCTGAATAACAGCATGAAATTCA TGAtaacagtattccaaggcaaacatgaaaaccacaaatataaaaattct ttaaagcgccgaaaacgctatataTAGCCATTAGctgtgtgtcctagcct tgtgaatgcgggcttagttaactaggctaggttctaaaagaaataatttt ggcGAGTGTGGTGGATTTTGACAAAATTCACCAAagttagttcccgccaa aattaagaAATTCTTTGTTAcacgccaaaataagttctcgccgatttttt tttcaacttttgctactcgccaaaattagttcccctAAGGTAACACGATA TTGTCTCTTTTTCATTGATAGAATGGAATCGCGGTCGATTTGTAGCAGAA TATAAACAACTCCTGTTCAACCAATCTTTGGAAACAACCAAATGCGAAGA TATGGATCTATCTCGTAGATCAATTCACTCTACCAACTATCCGTTACCGT ATTACGGACAAGGGAATTGTAAATTTACCTTATATTTTGGTAACAAGAAC ATTGCAGGAGTTAAAGTCTTGTTTACGAAGATCGATACAAGTACACCGTA TTCTGGTGCCAAATTATGTATGGTTGAACAAAACGACTATATAAGGATGA AAAGTAAGTAAATATAGACCTTTCCATAAATTACGCGacgaacatcactt acctcgttttgaaattattgccttGGTAATTAACTCCCAGAGGAtgttat taaaactacttcctattcataaaaaaataatttaatgtctCAGGAGACAa aatcaccatggaaattgtttgaatacgaggctaGTGATgtccgtgacgta atttatgaaaaggtctattctttaCAATAATTCAAAATCCCCCACATAGA CAATGACCGAGTGGTTTAAGAGACGCTAGTGCCTTAAACCTTCTGTCCTC GTTCCTTGCACGTTCTGTCCAACTAATTTTTGCCCCGAGGAAACAATATT TTCTACGTAAAATCATATCCCGCAGTAATAGGACACAGACTCGTTGGAAC AACCGCTAAAGTGGGGaagctgaaggctcaaaatgagataaaagtCGCTA GGAAGTTGAGAAAAAAAGTCTTATTTACTCAATAGTGGGAAGGCTGAAAT CTCCTCAATCTTCCCGCTTCCGCGGCGCCATGAACAGTCGTATTTTGCAC TCGCACAGTGGTGAAGTGAATCGAAACGggataataataacaataatgac AATATCGGGAACTATGCTAAGCGAACGTAGTGAACGTAGCGTTAGCTGCA GTGTCATAGGCAGCTATTTTAATAGTCTCATCTCGCAGCGACTTCTAACA AGgattaaaataacttttaagagtTTCTCATCTTATCCGAAATCCCAAGA TTTGGCCTATTTTCAGTTATACAGTTGACTCGCTAATTCGAGCTGAAACG GGAATcttattttgttcgaattatggagagaTTCGCATTATAGAAAGTAT ATATGAGGATTTCTCCATGGCGGGGATTGAGAAtaagttcaaattataga aagatttgaataatagaagttcgaataggTGACAGTCTACTATATGTCCA TTCACTTTTTataattggcccagcgctagcgatagggcctttcatttgca actttccgtcctcatccttccgctgtctgtccgtccgttttggtagaaac ggcgcttaaaaccNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTGTCTTTGATCAACat ggtcatacatttgctgttttgcacgctcgttttcaacacgttacttttcg ctgggccttcacgcccaacgggcttcttgttttttttacatCTTTCTTCA GACGTAAAGAAAACAGGACAGATTCAATACTTTTTTGTAGTACCCAGAAA TGGCCGTTCACCAACCTTTTCCATTTCTCATCTAGCTTGTGGAGGAGGCG TACAGGCTTGACGGTGTGGCGGTATAATACTCTGTGTCAAACGGAACACG CAGGATAAAAATTAAGACATTTAGCATTCCTTACCACCGGTGTTCACGGT AATTCAAGAAAAATGCAACGACCCCAACTTGTTTGTCTATTTTCAGTTAT ATTTTCATAACATTCCTTTTTATATCTTATAGATGTGAAGAAAACAGGAC AAATTCAATACTATCGGTTTTGTAGTACCCAAAAATGGCCGTTCACCAGA ATCTACTGGAAAACCAAACGACTTGAAATCACCATGAATACCCCTGTCAA ATGGAACAACCGAAACAAAGGATATATGATCAGTTATTTCCCAATATGGA GtaagtttttcacttttcagtCACTTGATTTCCAACGACCATTTTCAGTG GGCACTCGCATATTAAAGAAGTGAATCGAAGCGGGAATATCGCGAAGCTT CGCTATACAAGCGTCCTTGGTCTTAGCGAGACACAGTGATAGCGCTATAC CAAATTTGTCCTTCCACATGGGATTAGTATGGCTCGAAATTCGCAGAAGG gtatttttgccgaaaagagatTACAGCCAGTAGTTTGACAGTTTGTCACA AACTCCACCGCTGCTATTTTTCAGTAATACCGACTTGAGGCTGTTAAGCT AGGCGCATATATATTTCCCCTTACACTATCCCTTTATTCATGCTTTATTA ACGGAAGATGGTATTGTCTGAAGAAATAAATAGAATCCTATTTAGACCTA AACcatgtttatttttcatagATTCAGCGGCCGCGGCGGATGCTGAAAAA GATGAGGAAAGTGGTGGTCTGGCGACAGGTTGGATTGTCTTTCTGGTCAT CTTAGGAGTCGTAACATTATTCATCATATATATAAAACGAAGATGGTTTA AATGGAAATGTAAAAAAGCAAGATGGAATTGTTTGAACTGTTGTTATGGA GTGAAAGATAATATGATCAAACAAGACGAGCCGGAGACTGTTTCACCAGC CTTTAATCCACCGGGAATCGTCGTTGCTAGTAAGTACTTTTATGAGATAA ATTTTagggggattaaatttcgcggatttcgcggatttgggtgtcatgcG CGAAATtgagtcccaatggaaatttgggaAAGAAATGCTTACTCAGACAC CACAGAGacgctaataatgcgtatttcaacaaccaacatgaatgatttga cagtaaaacgCAAGGAAagatcgtgaaaatattgtcacacaatagtgtca tccgcgaaaattaatgcAATTAAAGTAAAGTACTATAgttgagtctcttt aactcgaaccacaataactcgaaaagtttCCTTTACTACATCAAGTTTTa tgatcccttcagttaacaatgaaatttccttaactcaaacaaatttgtga cccccgtgcgtgttcgagatATAGAGAATTCACTATATCTATAATATCGG TCAATatatattgggaattttggttaattcctcgtttttagcattttaaa gctcgggcgagaatATCGCTTTTGGGCCATTGGTTAGATGTAATCGAATA TTTAAGTTCGGgtggggtttatagacttccaggcatATTCCTATTGGAcc gttcttgaacttttggatcctgagatcccAAGGTCGTAAGTaagtgttaa aactctacccttccaacctaaatTGAGTGcttccaaatcgattgtggcTA TAAGATTCCGGTTGGGATTTccgttttttctcaaatattatggccgGTAT TGTACTGCATCTTTACTTTGACAAATACTGAGATTCATAGTACGAATATA AATATCTTCTCTGATATCTTAGCTTTCTACACATAACTCAATGTGGAATA TCTATTCTGAACAAGAAAGCCCCTCCCccaagtttttgtttttcttgaat taacagtagcgtagccaagaggggcgcaaaatttgtgtaggagagcagat ttttatgactttataattatttttttattaaaatgaatagataattacag tgtcataaaaatctgctctccaacacaaattttgcgcccctcttggctac gctacagGAATTAATGCCTCATGGCTTCACATTAACTTTGCATAGTCGAT CCCAAAATGACGgtttaaaatagtttttgaattcttttttatcAGGCTAC ACTGCTCCACAAAGTGAGAATCCTTCTCCATACCAACCACCTACATACAA GAATTATTCATCATTTGAACAATCTCCACCTCCTATGGGTGCAACACCAC CAACTCAACATTCAGCCTCCGCCCCTTACCAATCGCCCTCTGCACCACCA CAATCACCAACCGCCCCTGGAGATGGACCGCCCCCGTTTCCACCCTCCTA TAATGACTCGATGGGAGGAGTAGATACGGAACGAAAGGTTGGATTTATGT AAGGCGAAGTTTCGATGGgaacatcttttttttttttacaatagatctta tcggagtttttgattttttaaaaaaagcgatgtattgtgggattgtttct ggttgattacaatagaattccctcgaggaattccaaAAAGATTTCTATTG TTATACCCTCGAAACGATCCCACAATGCAtgtattttttaggaaaatcaa aaactccgataaggtccaTTCCTCTGGCACATTGAATATTAATGAATGAA ATGAATCTTCTCTGACTCAAGAGTGCGTGGAACATTACTCTTTTCATATT TTCTACGTTTGTTAAGTTTGGTTTGAATGGTTAGACCAATGTCCAAGTTC ATGGATGATTGTCATGGTTGCTTTTTTCTCATTGAATGGGCGCTGAGTGG AATGGCGATCTTTCACCACAGTGTAATCTtcatgtacagggtgtcccgaa aaaaagtatcgagttcgaacatgattctgagtagaagatTGTTGCGTGTC TTtcacaaaatgtaagaaaatat

Coding sequence (CDS) from alignment at sc0000072:669122..676594+

>TCONS_00006908 ID=TCONS_00006908|Name=TCONS_00006908|organism=Clytia hemisphaerica|type=CDS|length=7002bp|location=Sequence derived from alignment at sc0000072:669122..676594+ (Clytia hemisphaerica)
TTAAGATGGAAAGTGTTTGAGGTCTGGGACCAAGCACCTGATTGTAATAA
TGTTTATGTTCGAATCTGGATAGGATGTCCTGGATCCTTGAAAATGTTGA
CACGATTTTGTACGATGAACGATTCAAATATCATACCACCTGATCTCTAT
TCGAATGATCATtgtatgaaaattgaatttaataCACTCTCTACTATGAC
AAAATGGAATCGCGGTCGATTTGTAGCAGAATATAAACAACTCCTGTTCA
ACCAATCTTTGGAAACAACCAAATGCGAAGATATGGATCTATCTCGTAGA
TCAATTCACTCTACCAACTATCCGTTACCGTATTACGGACAAGGGAATTG
TAAATTTACCTTATATTTTGGTAACAAGAACATTGCAGGAGTTAAAGTCT
TGTTTACGAAGATCGATACAAGTACACCGTATTCTGGTGCCAAATTATGT
ATGGTTGAACAAAACGACTATATAAGGATGAAAAATGTGAAGAAAACAGG
ACAAATTCAATACTATCGGTTTTGTAGTACCCAAAAATGGCCGTTCACCA
GAATCTACTGGAAAACCAAACGACTTGAAATCACCATGAATACCCCTGTC
AAATGGAACAACCGAAACAAAGGATATATGATCAGTTATTTCCCAATATG
GAATTCAGCGGCCGCGGCGGATGCTGAAAAAGATGAGGAAAGTGGTGGTC
TGGCGACAGGTTGGATTGTCTTTCTGGTCATCTTAGGAGTCGTAACATTA
TTCATCATATATATAAAACGAAGATGGTTTAAATGGAAATGTAAAAAAGC
AAGATGGAATTGTTTGAACTGTTGTTATGGAGTGAAAGATAATATGATCA
AACAAGACGAGCCGGAGACTGTTTCACCAGCCTTTAATCCACCGGGAATC
GTCGTTGCTAGCTACACTGCTCCACAAAGTGAGAATCCTTCTCCATACCA
ACCACCTACATACAAGAATTATTCATCATTTGAACAATCTCCACCTCCTA
TGGGTGCAACACCACCAACTCAACATTCAGCCTCCGCCCCTTACCAATCG
CCCTCTGCACCACCACAATCACCAACCGCCCCTGGAGATGGACCGCCCCC
GTTTCCACCCTCCTATAATGACTCGATGGGAGGAGTAGATACGGAACGAA
AGGTTGGATTTATGTAATTAAGATGGAAAGTGTTTGAGGTCTGGGACCAA
GCACCTGATTGTAATAATGTTTATGTTCGAATCTGGATAGGATGTCCTGG
ATCCTTGAAAATGTTGACACGATTTTGTACGATGAACGATTCAAATATCA
TACCACCTGATCTCTATTCGAATGATCATtgtatgaaaattgaatttaat
aCACTCTCTACTATGACAAAATGGAATCGCGGTCGATTTGTAGCAGAATA
TAAACAACTCCTGTTCAACCAATCTTTGGAAACAACCAAATGCGAAGATA
TGGATCTATCTCGTAGATCAATTCACTCTACCAACTATCCGTTACCGTAT
TACGGACAAGGGAATTGTAAATTTACCTTATATTTTGGTAACAAGAACAT
TGCAGGAGTTAAAGTCTTGTTTACGAAGATCGATACAAGTACACCGTATT
CTGGTGCCAAATTATGTATGGTTGAACAAAACGACTATATAAGGATGAAA
AATGTGAAGAAAACAGGACAAATTCAATACTATCGGTTTTGTAGTACCCA
AAAATGGCCGTTCACCAGAATCTACTGGAAAACCAAACGACTTGAAATCA
CCATGAATACCCCTGTCAAATGGAACAACCGAAACAAAGGATATATGATC
AGTTATTTCCCAATATGGAATTCAGCGGCCGCGGCGGATGCTGAAAAAGA
TGAGGAAAGTGGTGGTCTGGCGACAGGTTGGATTGTCTTTCTGGTCATCT
TAGGAGTCGTAACATTATTCATCATATATATAAAACGAAGATGGTTTAAA
TGGAAATGTAAAAAAGCAAGATGGAATTGTTTGAACTGTTGTTATGGAGT
GAAAGATAATATGATCAAACAAGACGAGCCGGAGACTGTTTCACCAGCCT
TTAATCCACCGGGAATCGTCGTTGCTAGCTACACTGCTCCACAAAGTGAG
AATCCTTCTCCATACCAACCACCTACATACAAGAATTATTCATCATTTGA
ACAATCTCCACCTCCTATGGGTGCAACACCACCAACTCAACATTCAGCCT
CCGCCCCTTACCAATCGCCCTCTGCACCACCACAATCACCAACCGCCCCT
GGAGATGGACCGCCCCCGTTTCCACCCTCCTATAATGACTCGATGGGAGG
AGTAGATACGGAACGAAAGGTTGGATTTATGTAATTAAGATGGAAAGTGT
TTGAGGTCTGGGACCAAGCACCTGATTGTAATAATGTTTATGTTCGAATC
TGGATAGGATGTCCTGGATCCTTGAAAATGTTGACACGATTTTGTACGAT
GAACGATTCAAATATCATACCACCTGATCTCTATTCGAATGATCATtgta
tgaaaattgaatttaataCACTCTCTACTATGACAAAATGGAATCGCGGT
CGATTTGTAGCAGAATATAAACAACTCCTGTTCAACCAATCTTTGGAAAC
AACCAAATGCGAAGATATGGATCTATCTCGTAGATCAATTCACTCTACCA
ACTATCCGTTACCGTATTACGGACAAGGGAATTGTAAATTTACCTTATAT
TTTGGTAACAAGAACATTGCAGGAGTTAAAGTCTTGTTTACGAAGATCGA
TACAAGTACACCGTATTCTGGTGCCAAATTATGTATGGTTGAACAAAACG
ACTATATAAGGATGAAAAATGTGAAGAAAACAGGACAAATTCAATACTAT
CGGTTTTGTAGTACCCAAAAATGGCCGTTCACCAGAATCTACTGGAAAAC
CAAACGACTTGAAATCACCATGAATACCCCTGTCAAATGGAACAACCGAA
ACAAAGGATATATGATCAGTTATTTCCCAATATGGAATTCAGCGGCCGCG
GCGGATGCTGAAAAAGATGAGGAAAGTGGTGGTCTGGCGACAGGTTGGAT
TGTCTTTCTGGTCATCTTAGGAGTCGTAACATTATTCATCATATATATAA
AACGAAGATGGTTTAAATGGAAATGTAAAAAAGCAAGATGGAATTGTTTG
AACTGTTGTTATGGAGTGAAAGATAATATGATCAAACAAGACGAGCCGGA
GACTGTTTCACCAGCCTTTAATCCACCGGGAATCGTCGTTGCTAGCTACA
CTGCTCCACAAAGTGAGAATCCTTCTCCATACCAACCACCTACATACAAG
AATTATTCATCATTTGAACAATCTCCACCTCCTATGGGTGCAACACCACC
AACTCAACATTCAGCCTCCGCCCCTTACCAATCGCCCTCTGCACCACCAC
AATCACCAACCGCCCCTGGAGATGGACCGCCCCCGTTTCCACCCTCCTAT
AATGACTCGATGGGAGGAGTAGATACGGAACGAAAGGTTGGATTTATGTA
ATTAAGATGGAAAGTGTTTGAGGTCTGGGACCAAGCACCTGATTGTAATA
ATGTTTATGTTCGAATCTGGATAGGATGTCCTGGATCCTTGAAAATGTTG
ACACGATTTTGTACGATGAACGATTCAAATATCATACCACCTGATCTCTA
TTCGAATGATCATtgtatgaaaattgaatttaataCACTCTCTACTATGA
CAAAATGGAATCGCGGTCGATTTGTAGCAGAATATAAACAACTCCTGTTC
AACCAATCTTTGGAAACAACCAAATGCGAAGATATGGATCTATCTCGTAG
ATCAATTCACTCTACCAACTATCCGTTACCGTATTACGGACAAGGGAATT
GTAAATTTACCTTATATTTTGGTAACAAGAACATTGCAGGAGTTAAAGTC
TTGTTTACGAAGATCGATACAAGTACACCGTATTCTGGTGCCAAATTATG
TATGGTTGAACAAAACGACTATATAAGGATGAAAAATGTGAAGAAAACAG
GACAAATTCAATACTATCGGTTTTGTAGTACCCAAAAATGGCCGTTCACC
AGAATCTACTGGAAAACCAAACGACTTGAAATCACCATGAATACCCCTGT
CAAATGGAACAACCGAAACAAAGGATATATGATCAGTTATTTCCCAATAT
GGAATTCAGCGGCCGCGGCGGATGCTGAAAAAGATGAGGAAAGTGGTGGT
CTGGCGACAGGTTGGATTGTCTTTCTGGTCATCTTAGGAGTCGTAACATT
ATTCATCATATATATAAAACGAAGATGGTTTAAATGGAAATGTAAAAAAG
CAAGATGGAATTGTTTGAACTGTTGTTATGGAGTGAAAGATAATATGATC
AAACAAGACGAGCCGGAGACTGTTTCACCAGCCTTTAATCCACCGGGAAT
CGTCGTTGCTAGCTACACTGCTCCACAAAGTGAGAATCCTTCTCCATACC
AACCACCTACATACAAGAATTATTCATCATTTGAACAATCTCCACCTCCT
ATGGGTGCAACACCACCAACTCAACATTCAGCCTCCGCCCCTTACCAATC
GCCCTCTGCACCACCACAATCACCAACCGCCCCTGGAGATGGACCGCCCC
CGTTTCCACCCTCCTATAATGACTCGATGGGAGGAGTAGATACGGAACGA
AAGGTTGGATTTATGTAATTAAGATGGAAAGTGTTTGAGGTCTGGGACCA
AGCACCTGATTGTAATAATGTTTATGTTCGAATCTGGATAGGATGTCCTG
GATCCTTGAAAATGTTGACACGATTTTGTACGATGAACGATTCAAATATC
ATACCACCTGATCTCTATTCGAATGATCATtgtatgaaaattgaatttaa
taCACTCTCTACTATGACAAAATGGAATCGCGGTCGATTTGTAGCAGAAT
ATAAACAACTCCTGTTCAACCAATCTTTGGAAACAACCAAATGCGAAGAT
ATGGATCTATCTCGTAGATCAATTCACTCTACCAACTATCCGTTACCGTA
TTACGGACAAGGGAATTGTAAATTTACCTTATATTTTGGTAACAAGAACA
TTGCAGGAGTTAAAGTCTTGTTTACGAAGATCGATACAAGTACACCGTAT
TCTGGTGCCAAATTATGTATGGTTGAACAAAACGACTATATAAGGATGAA
AAATGTGAAGAAAACAGGACAAATTCAATACTATCGGTTTTGTAGTACCC
AAAAATGGCCGTTCACCAGAATCTACTGGAAAACCAAACGACTTGAAATC
ACCATGAATACCCCTGTCAAATGGAACAACCGAAACAAAGGATATATGAT
CAGTTATTTCCCAATATGGAATTCAGCGGCCGCGGCGGATGCTGAAAAAG
ATGAGGAAAGTGGTGGTCTGGCGACAGGTTGGATTGTCTTTCTGGTCATC
TTAGGAGTCGTAACATTATTCATCATATATATAAAACGAAGATGGTTTAA
ATGGAAATGTAAAAAAGCAAGATGGAATTGTTTGAACTGTTGTTATGGAG
TGAAAGATAATATGATCAAACAAGACGAGCCGGAGACTGTTTCACCAGCC
TTTAATCCACCGGGAATCGTCGTTGCTAGCTACACTGCTCCACAAAGTGA
GAATCCTTCTCCATACCAACCACCTACATACAAGAATTATTCATCATTTG
AACAATCTCCACCTCCTATGGGTGCAACACCACCAACTCAACATTCAGCC
TCCGCCCCTTACCAATCGCCCTCTGCACCACCACAATCACCAACCGCCCC
TGGAGATGGACCGCCCCCGTTTCCACCCTCCTATAATGACTCGATGGGAG
GAGTAGATACGGAACGAAAGGTTGGATTTATGTAATTAAGATGGAAAGTG
TTTGAGGTCTGGGACCAAGCACCTGATTGTAATAATGTTTATGTTCGAAT
CTGGATAGGATGTCCTGGATCCTTGAAAATGTTGACACGATTTTGTACGA
TGAACGATTCAAATATCATACCACCTGATCTCTATTCGAATGATCATtgt
atgaaaattgaatttaataCACTCTCTACTATGACAAAATGGAATCGCGG
TCGATTTGTAGCAGAATATAAACAACTCCTGTTCAACCAATCTTTGGAAA
CAACCAAATGCGAAGATATGGATCTATCTCGTAGATCAATTCACTCTACC
AACTATCCGTTACCGTATTACGGACAAGGGAATTGTAAATTTACCTTATA
TTTTGGTAACAAGAACATTGCAGGAGTTAAAGTCTTGTTTACGAAGATCG
ATACAAGTACACCGTATTCTGGTGCCAAATTATGTATGGTTGAACAAAAC
GACTATATAAGGATGAAAAATGTGAAGAAAACAGGACAAATTCAATACTA
TCGGTTTTGTAGTACCCAAAAATGGCCGTTCACCAGAATCTACTGGAAAA
CCAAACGACTTGAAATCACCATGAATACCCCTGTCAAATGGAACAACCGA
AACAAAGGATATATGATCAGTTATTTCCCAATATGGAATTCAGCGGCCGC
GGCGGATGCTGAAAAAGATGAGGAAAGTGGTGGTCTGGCGACAGGTTGGA
TTGTCTTTCTGGTCATCTTAGGAGTCGTAACATTATTCATCATATATATA
AAACGAAGATGGTTTAAATGGAAATGTAAAAAAGCAAGATGGAATTGTTT
GAACTGTTGTTATGGAGTGAAAGATAATATGATCAAACAAGACGAGCCGG
AGACTGTTTCACCAGCCTTTAATCCACCGGGAATCGTCGTTGCTAGCTAC
ACTGCTCCACAAAGTGAGAATCCTTCTCCATACCAACCACCTACATACAA
GAATTATTCATCATTTGAACAATCTCCACCTCCTATGGGTGCAACACCAC
CAACTCAACATTCAGCCTCCGCCCCTTACCAATCGCCCTCTGCACCACCA
CAATCACCAACCGCCCCTGGAGATGGACCGCCCCCGTTTCCACCCTCCTA
TAATGACTCGATGGGAGGAGTAGATACGGAACGAAAGGTTGGATTTATGT
AA
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_003866XLOC_003866Clytia hemisphaericagene
The following polypeptide feature(s) derives from this transcript:
Feature NameUnique NameSpeciesType
TCONS_00006908-proteinTCONS_00006908-proteinClytia hemisphaericapolypeptide
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00006908-exon-sc0000072-1491911889:669122..669195TCONS_00006908-exon-sc0000072-1491911889:669122..669195Clytia hemisphaericaexon
TCONS_00006908-exon-sc0000072-1510915933:669122..669195TCONS_00006908-exon-sc0000072-1510915933:669122..669195Clytia hemisphaericaexon
TCONS_00006908-exon-sc0000072-1575043694:669122..669195TCONS_00006908-exon-sc0000072-1575043694:669122..669195Clytia hemisphaericaexon
TCONS_00006908-exon-sc0000072-1491911889:669673..669800TCONS_00006908-exon-sc0000072-1491911889:669673..669800Clytia hemisphaericaexon
TCONS_00006908-exon-sc0000072-1510915933:669673..669800TCONS_00006908-exon-sc0000072-1510915933:669673..669800Clytia hemisphaericaexon
TCONS_00006908-exon-sc0000072-1575043694:669673..669800TCONS_00006908-exon-sc0000072-1575043694:669673..669800Clytia hemisphaericaexon
TCONS_00006908-exon-sc0000072-1491911889:670543..670824TCONS_00006908-exon-sc0000072-1491911889:670543..670824Clytia hemisphaericaexon
TCONS_00006908-exon-sc0000072-1510915933:670543..670824TCONS_00006908-exon-sc0000072-1510915933:670543..670824Clytia hemisphaericaexon
TCONS_00006908-exon-sc0000072-1575043694:670543..670824TCONS_00006908-exon-sc0000072-1575043694:670543..670824Clytia hemisphaericaexon
TCONS_00006908-exon-sc0000072-1491911889:673854..674021TCONS_00006908-exon-sc0000072-1491911889:673854..674021Clytia hemisphaericaexon
TCONS_00006908-exon-sc0000072-1510915933:673854..674021TCONS_00006908-exon-sc0000072-1510915933:673854..674021Clytia hemisphaericaexon
TCONS_00006908-exon-sc0000072-1575043694:673854..674021TCONS_00006908-exon-sc0000072-1575043694:673854..674021Clytia hemisphaericaexon
TCONS_00006908-exon-sc0000072-1491911889:674443..674700TCONS_00006908-exon-sc0000072-1491911889:674443..674700Clytia hemisphaericaexon
TCONS_00006908-exon-sc0000072-1510915933:674443..674700TCONS_00006908-exon-sc0000072-1510915933:674443..674700Clytia hemisphaericaexon
TCONS_00006908-exon-sc0000072-1575043694:674443..674700TCONS_00006908-exon-sc0000072-1575043694:674443..674700Clytia hemisphaericaexon
TCONS_00006908-exon-sc0000072-1491911889:675817..676594TCONS_00006908-exon-sc0000072-1491911889:675817..676594Clytia hemisphaericaexon
TCONS_00006908-exon-sc0000072-1510915933:675817..676594TCONS_00006908-exon-sc0000072-1510915933:675817..676594Clytia hemisphaericaexon
TCONS_00006908-exon-sc0000072-1575043694:675817..676594TCONS_00006908-exon-sc0000072-1575043694:675817..676594Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000072supercontigsc0000072:669122..676594 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
Sort Descending | Sort Ascending | Only Non-Zero Values | Tile/Chart | Reset | Show/Hide Values

Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
37.0771 35.1799 27.5599 29.7028 44.9396 31.7905 25.9747 25.9623 23.8026 26.2174 30.0936 12.9562 21.9736 17.8368 5.61361 5.10812 26.7944 33.5821 28.4589 31.9328 16.2082 16.0796 16.6912 20.5362 21.608 18.8479 3.81663 2.89957 6.61189 8.00157
Annotated Terms
The following terms have been associated with this transcript:
Vocabulary: INTERPRO
TermDefinition
IPR000859CUB_dom
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00006908 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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