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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00006891 ID=TCONS_00006891|Name=TCONS_00006891|organism=Clytia hemisphaerica|type=transcript|length=219bp
gaaaaaaacaaaaaaaatccagACAAAGCataaaaaacacgaaaatatga
AGAAAGCACCATTTGTCCACTGGGTTGCCTTTGCAGTGCTTGTTTGTATT
TCGACACAAGCAGAAAGCCAAATTTCAAATGTCAAAGACACTTGCAGCCC
AACATTAATCGCTCAGTCTTGCCACAAATTTGTACGTTCAACACCACGAC
AGTATACAGCagAACCAAC Run BLAST on NCBI transcript from alignment at sc0000072:517186..518332+ Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00006891 ID=TCONS_00006891|Name=TCONS_00006891|organism=Clytia hemisphaerica|type=transcript|length=1147bp|location=Sequence derived from alignment at sc0000072:517186..518332+ (Clytia hemisphaerica)
gaaaaaaacaaaaaaaatccagACAAAGCataaaaaacacgaaaatatga
AGAAAGCACCATTTGTCCACTGGGTTGCCTTTGCAGTGCTTGTTTGTATT
TCGACACAAGCAGAAAGCCAAATTTCAAATGTCAAAGACACTTGCAGCCC
AACATTAATCGCTCAGTCTTGCCACAAATTTGTACGTTCAACACCACGAC
AGTATACAGCGTAAGTTACTTTGTCTGATTTATTAGGCTAttccattttg
taaaaatacttaaaaataacgaaaataagaacatgttaagaacattttta
ggcttgaaactcaaaaagttaagaacatcacaaagcttcaaaaattttgg
atgtttttataaaaaaaaaacgtgtagacatACTTTATACCACTCAGGCT
GGGTAGTTTGGCAAAAAGGGGTACGGGGATGTGCCGCCGGTCAGAGAATC
TTTTTTAGCTCTCACGAGTCataggtagggtcgcaaaaacaccaaatgGA
AAAATCAGTACCTTGTGGCTGAAGGAATtaggaaaaaaattgaaattttg
gtgtaaatttaattttgaatttcagtccaattttttggcaaaattcttaa
aaaccgACTCCCACGTAGGGTTCATTATTCAAACCTCAGCGGAATACCCC
CGTCAGTCGATAAAAGTAGTACCTCCTCCCCCCGgggtcttttttatttt
ttagaggTTTTGGTAGTCGACTTCATTCCAAGGGGTTAGATGACAAAAGA
TCATCTACCAAGGAATGAATAATAATTTGTTCAAGGGGTGTAGAATTTCC
TTTCCAGGGGACTTATgcaaattttgctattttccagGGCGTATCTGTAA
ACTTTCAAATAGCTTTTCACCTGAAAGTTTGTCtaaccccctgtatggat
attaTATGGAAAAGCCAAAGTTCTCCTCTTTTTTCCTTCGTCATTTAAAA
CTGTCTAAAAATCAACAGCTGTTACtttgaccccctccccctcatCCCTT
TCGAGAAAGCTGGTGTCTAAATAATATAGGGTCACCTTGGTAATCCTTAA
AACTCTTAAGTTTTTTCTTCTCTATATAAACCTTAACTCCATAAtccaaa
atttccttaactcaaacaaatcttcttttttttctcagagAACCAAC
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00006891-exon-sc0000072-1491911889:517186..517395 | TCONS_00006891-exon-sc0000072-1491911889:517186..517395 | Clytia hemisphaerica | exon |
| TCONS_00006891-exon-sc0000072-1510915933:517186..517395 | TCONS_00006891-exon-sc0000072-1510915933:517186..517395 | Clytia hemisphaerica | exon |
| TCONS_00006891-exon-sc0000072-1575043694:517186..517395 | TCONS_00006891-exon-sc0000072-1575043694:517186..517395 | Clytia hemisphaerica | exon |
| TCONS_00006891-exon-sc0000072-1491911889:518324..518332 | TCONS_00006891-exon-sc0000072-1491911889:518324..518332 | Clytia hemisphaerica | exon |
| TCONS_00006891-exon-sc0000072-1510915933:518324..518332 | TCONS_00006891-exon-sc0000072-1510915933:518324..518332 | Clytia hemisphaerica | exon |
| TCONS_00006891-exon-sc0000072-1575043694:518324..518332 | TCONS_00006891-exon-sc0000072-1575043694:518324..518332 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000072 | supercontig | sc0000072:517186..518332 + |
Blast
The following BLAST results are available for this feature:
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