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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00006838 ID=TCONS_00006838|Name=TCONS_00006838|organism=Clytia hemisphaerica|type=transcript|length=928bp
CTCTTGTTCTTTTCCTTTCAAATTGGATTAATTCTTTGTAACATTtgtta
aagtctgtctcaatattaTTTGTAGCGGAGAcaaaacttttgatagaatt
tgaattagataTAGTGCAGGGAATGTGTGCACAAAAAGGATGCAATTGTG
CATTTTTGAgtagaaagcatgaaatttggtacagtgaTACCTTAGGtggt
aagaaacattttaagcctcaGACACACATCCGGAACACCTGttggtgtat
tttacagaccggaatgCCTCCCAAGCAAGAAAATTATTTATGTCTCCAAA
ACATGTCATCGGTAGCACCGCTAGCCTTGCTGCCGTctcgttaaaaacat
aaaatgaaacaataaatttgacGATAACTCTCAGGAATACGTTGCTAACG
ACGTCAACACTTCGACAaattttctgttgttctattACTCCGAAGTCTTC
TATCTATATCTTATTATTAACATTTAATGATGACCAATACACGAGAAGAG
GTTGCCCTGAAAAGTCTTTGTTGGGTCAGGTTGTTGGTCATAAAATGATT
TCTATTAGTCAATTTTGTTCTCTTGCCTTAAGCAAGAAGTAATGAtgtga
atttgaatttaactATTCCGACATGGGAAAATACCTCTGAGTGAATAGGC
CTTACGGTGAGATACTTTCCCATGTCCAACCATGTCCAGTGATGGGCGGT
TGTAgaattttattatattattatattattagcCAAGATAAcggaggcaa
aatcatcgtcaacTAGTCAAAACTNTATATTATTAGCCAAGATAACGGAG
GCAAAATCATCGCCAGCtagtcaaaactccgactaatatttctaaatttt
gactcgaaagtatggaataattttagagaatatgggattcaaattatgat
attcttatgacacggACTCTCAATTTTG Run BLAST on NCBI transcript from alignment at sc0000070:539626..540553 Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00006838 ID=TCONS_00006838|Name=TCONS_00006838|organism=Clytia hemisphaerica|type=transcript|length=928bp|location=Sequence derived from alignment at sc0000070:539626..540553 (Clytia hemisphaerica)
CAAAATTGAGAGTccgtgtcataagaatatcataatttgaatcccatatt
ctctaaaattattccatactttcgagtcaaaatttagaaatattagtcgg
agttttgactaGCTGGCGATGATTTTGCCTCCGTTATCTTGGCTAATAAT
ATANAGTTTTGACTAgttgacgatgattttgcctccgTTATCTTGgctaa
taatataataatataataaaattcTACAACCGCCCATCACTGGACATGGT
TGGACATGGGAAAGTATCTCACCGTAAGGCCTATTCACTCAGAGGTATTT
TCCCATGTCGGAATagttaaattcaaattcacaTCATTACTTCTTGCTTA
AGGCAAGAGAACAAAATTGACTAATAGAAATCATTTTATGACCAACAACC
TGACCCAACAAAGACTTTTCAGGGCAACCTCTTCTCGTGTATTGGTCATC
ATTAAATGTTAATAATAAGATATAGATAGAAGACTTCGGAGTaatagaac
aacagaaaattTGTCGAAGTGTTGACGTCGTTAGCAACGTATTCCTGAGA
GTTATCgtcaaatttattgtttcattttatgtttttaacgagACGGCAGC
AAGGCTAGCGGTGCTACCGATGACATGTTTTGGAGACATAAATAATTTTC
TTGCTTGGGAGGcattccggtctgtaaaatacaccaaCAGGTGTTCCGGA
TGTGTGTCtgaggcttaaaatgtttcttaccaCCTAAGGTAtcactgtac
caaatttcatgctttctacTCAAAAATGCACAATTGCATCCTTTTTGTGC
ACACATTCCCTGCACTAtatctaattcaaattctatcaaaagttttgTCT
CCGCTACAAAtaatattgagacagactttaacaAATGTTACAAAGAATTA
ATCCAATTTGAAAGGAAAAGAACAAGAG
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00006838-exon-sc0000070-1491911889:539626..540553 | TCONS_00006838-exon-sc0000070-1491911889:539626..540553 | Clytia hemisphaerica | exon |
| TCONS_00006838-exon-sc0000070-1510915933:539626..540553 | TCONS_00006838-exon-sc0000070-1510915933:539626..540553 | Clytia hemisphaerica | exon |
| TCONS_00006838-exon-sc0000070-1575043694:539626..540553 | TCONS_00006838-exon-sc0000070-1575043694:539626..540553 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000070 | supercontig | sc0000070:539626..540553 . |
Blast
The following BLAST results are available for this feature:
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