TCONS_00006837 (transcript) - C. hemisphaerica

Overview
NameTCONS_00006837
Unique NameTCONS_00006837
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length279

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00006837 ID=TCONS_00006837|Name=TCONS_00006837|organism=Clytia hemisphaerica|type=transcript|length=279bp
NTTGAATTATACCTTTCCATTACCTGTGGTGcgattttggtacagttttg
ACACTGGAAACTTCTTGATTTGTATGACAAGCATATCTGGATCTGGTAAA
GTGGAAGTTCTGTACAAAGATAATGGACTAAACGGCGGCACTTCCTGCAT
TGTAGGGTATCTTTTAGtgcgttttcttcatttatgatgcactttgacgg
gctgcaaaagtcgtttattgatggtgatttttgattattttcttggattt
tctccgccatctttgtgcatttttcagac
Run BLAST on NCBI

transcript from alignment at sc0000070:525647..525925

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00006837 ID=TCONS_00006837|Name=TCONS_00006837|organism=Clytia hemisphaerica|type=transcript|length=279bp|location=Sequence derived from alignment at sc0000070:525647..525925 (Clytia hemisphaerica)
gtctgaaaaatgcacaaagatggcggagaaaatccaagaaaataatcaaa
aatcaccatcaataaacgacttttgcagcccgtcaaagtgcatcataaat
gaagaaaacgcaCTAAAAGATACCCTACAATGCAGGAAGTGCCGCCGTTT
AGTCCATTATCTTTGTACAGAACTTCCACTTTACCAGATCCAGATATGCT
TGTCATACAAATCAAGAAGTTTCCAGTGTcaaaactgtaccaaaatcgCA
CCACAGGTAATGGAAAGGTATAATTCAAN
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_003836XLOC_003836Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00006837-exon-sc0000070-1491911889:525647..525925TCONS_00006837-exon-sc0000070-1491911889:525647..525925Clytia hemisphaericaexon
TCONS_00006837-exon-sc0000070-1510915933:525647..525925TCONS_00006837-exon-sc0000070-1510915933:525647..525925Clytia hemisphaericaexon
TCONS_00006837-exon-sc0000070-1575043694:525647..525925TCONS_00006837-exon-sc0000070-1575043694:525647..525925Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000070supercontigsc0000070:525647..525925 .
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
16.204	16.454	29.6705	27.7986	6.7551	10.6759	13.1701	11.8033	7.77444	15.23	15.0458	10.4938	14.2791	10.5541	5.69615	11.5009	8.64878	12.3235	15.4802	12.9805	9.28132	15.2911	5.05482	7.86104	20.2018	14.7204	12.112	8.93507	7.91065	9.14316
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00006837 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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