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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00006777 ID=TCONS_00006777|Name=TCONS_00006777|organism=Clytia hemisphaerica|type=transcript|length=420bp AAAACATTGACAATATTCACCACGTGGGTTTGGAAATTACGTAATTGACA CGTGTATGAAAAATGAGGAACGAAAATCAAATCTCATATTTTGCTGCCGT TGACAATGTCTGCAAATGAAATAAGACCCACTGGAAACCAACCCAGGGTC GTCgagcaacaaaataaaaaacaacccTGGGTTTTCATCATAGAAGATGA TGCATCAACTGAATGCTCTGATGAAATATCTGAAGACTTTGGTGGCGCCA ACAGTTTGCAAGCTGAGGTTTACAGACTTGGTCTTCGCTTGGAGGAGATT GACGAAGAAATTGGCGATCAGATACggcaacaacaacagcaacaaaaaCC ATCCACTACCACCGGCAACACTGGTTATGAGGACAACTTGTTGAATGGTG GTTGTGGCGACAGTTCGAGG Run BLAST on NCBI transcript from alignment at sc0000070:183546..185765- Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00006777 ID=TCONS_00006777|Name=TCONS_00006777|organism=Clytia hemisphaerica|type=transcript|length=2220bp|location=Sequence derived from alignment at sc0000070:183546..185765- (Clytia hemisphaerica) AAAACATTGACAATATTCACCACGTGGGTTTGGAAATTACGTAATTGACA
CGTGTATGAAAAATGAGGAACGAAAATCAAATCTCATATTTTGCTGCCGT
TGACAATGTCTGCAAATGAAATAAGACCCACTGGAAACCAACCCAGGGTC
GTCGAGCAACAAAATAAAAAACAACCCTGGGTTTTCATCATAGAAGATGA
TGCATCAACTGAATGCTCTGATGAGTACGCCTATTACCTTAATGAATTTC
TTGTTATATGTAGACTGATTCCGTGTGATGTCATTTTCACCCACGATCAG
CCATTTTTTCTGAGAAATGGTAGAAAGAATATGTACAGGATGGTTTAGTA
ACAACTTGATAACTCAAAGTCTACAAACATTTCCCGTTCGGACCTACGCA
TAGTTTTTTGTTTCGTGGGTGAAATTTATGTCAGTTNTTTGCTTTGGCTG
GCAAATTTCCTTTGCGATGAATATATTGGCTGGTTAATTACTGCTTACAT
ATATTTATTCGGATAATTAATTAAGAGAGCTATACATTCTTATTTAATTA
CATCCCGTATTCATTTGTTTTTTATGGCCTTTTATAATTGTGTTGCTTTC
TGTGTGCTGTTGTTGGTTTTTTTTATATAATGGTGGTTTTTAAAGCTTTT
GATTTGAATATGCTGTCAATTTATCTATTTATTAAGATTTGGCACTTTGG
AAAGCATCTGATGTCGACCTTCCATTTAGAAGAATTTTAATGTTAAATGT
TCTAAAATATGATGTTATTCTTGCTCTTTTTAACTCTAACTTTCTTTATG
AGCCCTTGCTTGTTTTTATGGATTCTTTCATTCTCAAAGTTTTTGTCTCA
GAAGTAAAAATGGCGAATAATAAAACATTGACAATATTCACCACGTGGGT
TTGGAAATTACGTAATTGACACGTGTATGAAAAATGAGGAACGAAAATCA
AATCTCATATTTTGCTGCCGTTGACAATGTCTGCAAATGAAATAAGACCC
ACTGGAAACCAACTCAGGGTCGTCGAGCAACAAAATAAAAAACAACCCTG
GGTTTTCATCATAGAAGATGATGCATCAACTGAATGCTCTGACGAGTACG
CCTATTACCTTAATGAATTTCTCGTTATAGACTGATTCCGTGTGATGTCA
TTTTCACCCACGATCAGCCATTTTTTCTGAGAAATGGTAGAAAGAATATG
TACAGGATGGTTTAGTAACAACTTGATAACTCAAAATCTACAAACATTTC
CCGTTCGGACTTTCGCATTTTTTTTTGTTTCGTGGGTGAAATTTATGTCA
TTAAGGAACAGGCAGTTTGCTTGAGGTTTGCTTAAAGATAGTCCTTAACT
GGATTTTGCCGAATCGGTCCATATGAAGAGATTATACAGAGATACCTTTT
TCGACTTGGGAAAAAATAACGGGCAATTACATTTTATATCCATACATGGG
GGAATCAGCCCAATTTACCAGATTACCTATTTTACGTATCATTTACTCTA
CATTTTATATTTTATTTCTACTGATTTCTATATACAGTCTTTTTATATGT
TTTTGACTTTAGGACGCAATATTGAACACTAGAAGCCCTTTCAGTGGAAA
CTTTGAAGCCTCTATATTTGTGGTTTTTGTAAAATGCATCTACTCAACAA
TTTTTATCACTCATTTTAGAATATCTGAAGACTTTGGTGGCGCCAACAGT
TTGCAAGCTGAGGTAATAACAAATGCTGTAACCACAAAAAATATTCATCA
TTTGATAAGTAGCCTCAGTCTGGAAGTTTCTAGTCAAGCTTTCTCCAGTC
TTAAAAAAGTTTGTGATTGTCTTTCCAACTCTNATCATTTGATAAGTAGC
CTCAGTCTGGAAGTTTCTAGTCAAGCTTTCTCCAGTCTTAAAAGAGTTTG
TGATTGTCTTTCCAACTCCGATAGTAATACTATGTAATAACAAACTAATA
GAAAGTAGAAAAAATATCGTAAAACCGATCATTTATAATATTGGATATCT
TTATACATTTTGGATCAATGTGAAAACCGAAGCCAATCTTCATGTTAATT
TTCTTTATCGAATAAAGGTTTACAGACTTGGTCTTCGCTTGGAGGAGATT
GACGAAGAAATTGGCGATCAGATACGGCAACAACAACAGCAACAAAAACC
ATCCACTACCACCGGCAACACTGGTTATGAGGACAACTTGTTGAATGGTG
GTTGTGGCGACAGTTCGAGG
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
Feature Name | Unique Name | Species | Type |
TCONS_00006777-exon-sc0000070-1575043694:185542..185765 | TCONS_00006777-exon-sc0000070-1575043694:185542..185765 | Clytia hemisphaerica | exon |
TCONS_00006777-exon-sc0000070-1575043694:184054..184096 | TCONS_00006777-exon-sc0000070-1575043694:184054..184096 | Clytia hemisphaerica | exon |
TCONS_00006777-exon-sc0000070-1575043694:183546..183698 | TCONS_00006777-exon-sc0000070-1575043694:183546..183698 | Clytia hemisphaerica | exon |
TCONS_00006777-exon-sc0000070-1510915933:185542..185765 | TCONS_00006777-exon-sc0000070-1510915933:185542..185765 | Clytia hemisphaerica | exon |
TCONS_00006777-exon-sc0000070-1510915933:184054..184096 | TCONS_00006777-exon-sc0000070-1510915933:184054..184096 | Clytia hemisphaerica | exon |
TCONS_00006777-exon-sc0000070-1510915933:183546..183698 | TCONS_00006777-exon-sc0000070-1510915933:183546..183698 | Clytia hemisphaerica | exon |
TCONS_00006777-exon-sc0000070-1491911889:185542..185765 | TCONS_00006777-exon-sc0000070-1491911889:185542..185765 | Clytia hemisphaerica | exon |
TCONS_00006777-exon-sc0000070-1491911889:184054..184096 | TCONS_00006777-exon-sc0000070-1491911889:184054..184096 | Clytia hemisphaerica | exon |
TCONS_00006777-exon-sc0000070-1491911889:183546..183698 | TCONS_00006777-exon-sc0000070-1491911889:183546..183698 | Clytia hemisphaerica | exon |
Position
The following features are aligned
Aligned Feature | Feature Type | Alignment Location |
sc0000070 | supercontig | sc0000070:183546..185765 - |
Blast
The following BLAST results are available for this feature:
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