TCONS_00006752 (transcript) - C. hemisphaerica

Overview
NameTCONS_00006752
Unique NameTCONS_00006752
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length2762

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00006752 ID=TCONS_00006752|Name=TCONS_00006752|organism=Clytia hemisphaerica|type=transcript|length=2762bp
aaaagtagttgacagatATTCTGCTGATTCCAAGAGGGTGATTCATTTTC
CAACTGGAAATTCCAATAAGTCAAGAGGCTTTGAAATAGGGGAAATGACA
CTTTATCTGTTCTATCTACTTGAAGTTGGGTCAGCTGATATGCATAATGT
AAAATATGCCATTGAGAGAAAAGGAAATGATGACCCATTTGTTTATGAAG
AAGGAAAAGAATATAGACAGGCAATGGAGAAACTAATGGGGTTTATATCA
GCtgatgaaattaaaaataatttcttaatACAAATcaatataaatttcaa
atccATGCTGAATCAAGCAGCTCAACCCTATTCTACAAATGATTTGTCAA
CCATAACAAACATACTTCATTGGTCAAAGCAATTGCTTTCTTTATTGAAG
GATGTTCACAAAGATAAATTGAGGAAATGTGAGAAAAGGAAAGAACCAGA
GAAGAAGAAGCAGCCAGAACAGGAACAAAAGTTGGAAACTGCTACAGCAC
AAGATATCAAGAACAGTGTTCGTACAGTGACCATGGAGAACAGTTCAAAA
GATTTAATCGAAACATTAAGAGGGAAACATGAGCAACTACAGTCTGAATT
GAATCGTGAGCGCAAAAAgAATTGTGATCTTCATGAAGCTAATCGCATTG
CTGAAACCGAGGCATCACAAGCCAGGAAGATTATTGAAGAAAAACAAGAT
GAGATAGTGAGCTTGcgtaaagaaaatgaagattgtaGGAAtagGATCAG
TTCTATGATGATGTCTCAAGAGGTTGGCACAACATCTTCACAAAATTTGT
TGGACATTAACCGCCCAAGTATCGTCAAAGATAAATTCAGATTACTCTAC
GTCAACGAGTACAATGATGTTTTGAGCGCATGGGATCAATTGTCTGAAAA
AGAATGTTCTGATTATCTCCTGGAGATTTTGTTTGATGCAAACGATTTAT
GCAACCAATATGCTAATAAATTCACCGGAGATGTCACAAACTCGCTTGAG
TGTATTTTCAAgaagATGCCATTTTCTGGTAATAATACCTACAAAGGGAA
CAAACACATTTTGGAATTTATTCACGAAAATTTGAAGAACATGCCTCATG
AAAGTATTCAAGAACAATTCTGCAAACTTGTGCTCCAGAGACATGAAAAA
CGAAATCCAGAATTAGCTCAGGAGAAATATGATGAGATGATTTCAAAGTA
TATCATGGGATGTGTGTCGGTGACTTGGTTAATGAATTGCTGTCTACCGC
CCATCTATATTACCAAAgatgtcggggaaaaattcaaCAAGAAACTTCAT
ACAAAGTTCAGTGGACGTGGTGATTATGTTCAGTTTTATTTATGGCCATG
TTTGTTTACATCTGAAGATGAGTTCAAATCTGGATTGCCAGCATTTGCCA
AAGGTGACGTATATGTTGGGAAGAGGCCACCTTCTTTAAAGGGGAAAAAA
GTGGAggaagtttcaaataaaaatgttccAGTTGAAGAAACACAATGTAA
AAAGATCAAGAGTAAAGATGTAGCAACTGGTCCTGGAATTGCCGTCCGTG
AGAATTGTGTAGCAGAGCCAAAGATTGAccaaaagaaattgttttaCAGT
CCAATGGAAGAAAAGAGAATCGTAGAAAGGCTACAATCAAGTGGAAATGA
TCCACCCAAGGATGATGAAGTTATCCAACTGGCTGAAAAACAGtcaaaac
aatcttccaaagaTGGTATAAAAGAAAGTAGCAAATCAAACCTAAATGAT
TCCAGCAGTTCTGCCCTGAAAGGCACTGACAAGTTTGCTGAAAGAGgtga
aaaatttcagtcagAGAAGAAACAAGAGCTACTGGTCCATTACAAATCTG
ATGAAATTTCTATTGACCCACAAGATCAGTCTCGCAGTCAACATTCTGAG
CGACAAAATGACCATGACGAAGACGTCAGTGATTCTGGAAGATCTGACAC
ACCAACTCCAATGGAGATAGATGAAAAGCCTCCTAGAGAATCTAAACTGC
CAGAATTGTATGAAAACATTAGTGGTATTGGAACAAGAAAACCCTCAAAA
TCAGATTATGGTAAATCCGAAGTCAAAACAACAGGGACTGTTATTAAAAC
TACTAAAGTTACCACGATTACTTATAGTAATGCTGCTAAATTAACTCGAC
CGCCTATCCGAAGCTCCACTTCGCGGCGCTAGTTAAAACTAATGATGTTT
TAAGACTATAAAATAATTGATGATTTTAAATAcatcttttctattttgta
ttttttgttaagggataatttgaaataaattttgttgactttttgttgag
ttttttcatgaaattacaTCTTATGTTTTAATACTTTTGGcgcacttttt
tattttttcacataTATAGCTATCAGAGTTTATTATGGTAATTTATTTTG
CTAGTTTTTGTAAATTGGCTGAAAAAAGTCATTGTAATTTTCCAATCTCG
AAGAAATCTTTCCCCAGGACCAGTGGTTGGTTCAGAAAGTGGAGCCTAAG
CAAACGCAACTATTTTTATAGATCCACAAACCCAAGTCGCCCTATTCCAT
TCTGATTTTGCGCCAAGAGTcttaatcagatggtttgagatatttggacT
GTAGATTATTTCTATTTTCGTGAACAAAACCCCAGAATATTTTTTgccaa
acttttttccaaaatcaagttaaaagttttttttggcttttagtgAGAAA
ACCATAGAATTACAAAATGGAAGAATTCATAGAGTTTCCAAATTGTTGTA
actcaacttttg
Run BLAST on NCBI

transcript from alignment at sc0000070:327057..342755+

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00006752 ID=TCONS_00006752|Name=TCONS_00006752|organism=Clytia hemisphaerica|type=transcript|length=15699bp|location=Sequence derived from alignment at sc0000070:327057..342755+ (Clytia hemisphaerica)
aaaagtagttgacaggtaaagaaatttttttcaactgcgtttagaaaata
tcaagaaattgCATTATGAAATAAATGTTGTGTTTTGCCTCTGTGAGGGA
AacattccaccccccccccttctccCTAGCCTGATAACAGCtagtcataa
ttttcttacgggcatggtaaacctctgaaggcccttgaaaattagccatc
tgaggaaaatagtcctctcGTGGAAAATTCTACAATAAGAATCTttttgt
gcgccggaaagtaaaaaactaaaatttcctGATACGATGCCCTATTCCTA
AACAcgatcacgcaactttgttgtcatttcCAGTCCTTTTAGATGAGCGC
GGTTcttacgattttgagatagcGTATTCGTCAAATAGAGCTTTAGTGTG
GTGGgtagaaaacaatcacaatctgatctcagggcCTCATCCTTACCCTC
ATTATTCTGCAAGTATAACAACTGTTTTCTaacgctttttttattttaca
gatATTCTGCTGATTCCAAGAGGGTGATTCATTTTCCAACTGGAAATTCC
AATAAGTCAAGAGGCTTTGAAATAGGGGAAATGACACTTTATCTGTTCTA
TCTACTTGAAGTTGGGTCAGCTGATATGCATAATGTAAAATATGCCATTG
AGAGAAAAGGAAATGATGACCCATTTGTTTATGAAGAAGGAAAAGAATAT
AGACAGGCAATGGAGAAACTAATGGGGTTTATATCAGCtgatgaaattaa
aaataatttcttaatACAAATcaatataaatttcaaatccATGCTGAATC
AAGCAGCTCAACCCTATTCTACAAATGATTTGTCAACCATAACAAACATA
CTTCATTGGTCAAAGCAATTGCTTTCTTTATTGAAGGATGTTCACAAAGA
TAAATTGAGGTACAGATATGTTAATTAAATTCAATTCATTGCAATGTGTC
TTGAGCATTGAGTTCAAAGCCCATCTTGGATGTGAAAGGATGTCACTTAT
TTCTTATTGAAAATGTTAGACCCGCATGGTTTTCGGTCAAACTCTGAATT
GAGAGAAAAATCCATTGCATCACCCCAAAATATGGCATAAATCTctaagt
ttcatttttctttgctttggacTTGTTGAACATTCCTCTCTCTCTTTTGT
ATTTAACTCAATGGTCTTGAAACTAacagaatttttccaaaaattattct
TGTTCTCAATAATCATAAAGATATTAgcattttttattgaatttccATCT
ACTGTTTTTCATATGTCCCTGAGCAGaattaaacattttcttttccaATG
GGCATAAATTCATCTAAcatccttaaattttatttaagtatttattttta
acattttaacagTTGATATGAATTTGTCTTTCAGGAAATGTGAGAAAAGG
AAAGAACCAGAGAAGAAGAAGCAGCCAGAACAGGAACAAAAGTTGGAAAC
TGCTACAGCACAAGATATCAAGAACAGTGTTCGTACAGTGACCATGGAGA
ACAGTTCAAAAGATTTAATCGAAACATTAAGAGGGAAACATGAGCAACTA
CAGTCTGAATTGAATCGTGAGCGCAAAAAGTTAGCAGATAACATCtataa
aaaatcctaaataaATCAATAATTTGCTGTGTGTATATCTTTTTTGTGAA
GTGATCTCTGATTTAGGTTAGGGCTTATTCCCACTAGGAAAGGAGTATGT
CTTGTCTTGTCTTATATCTTTTAAGAGAACTGTTTTTTGAAAAGGTTCAA
ATCTTCCTGATTTTGACATATATAGTTAAGTTACTGAATAAAACATAAAA
TGCCAAAGATTTtgtgaagcaaaaatttaagaaataaaactctttttgtt
ttttgttttcaggaaTTGTGATCTTCATGAAGCTAATCGCATTGCTGAAA
AAGAGTAAGGATGGTGACCTCAACCTCCATAAAAAAAGAGAAGGTTTATA
CTTAAAACCTCAAAAATGTCTTTTTGAtcaaaaatcgtgatttttattta
ttgaatatttttgtttaacaCTTGTTGAATCACGAGCGAAGCCAGAACCC
CCCCTTCTCAGGTTGTGAAATGTTAACGACTTTGGTTACGTGAGCTATTA
TGTAACAACAGGAAACCCATGTCCCATTTTTACGAGTCTCATCAGTGTNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNttttttttgttaatattaACTTTAAT
TGACTTAGAAATCTCAAGCAAATGATTTCTCAATGCCTCTatcaattttt
tatcgaattatAGATATAATTGATCTACTCCTCTTATTTGAAACCGGATT
TAATAAATCAGATATTGAACTTGAACTTGCCTTAATTAACCTTGACGTAG
CCCCTGATGTAGGCGATGTAAATTTTACTAATTAAAGAGAAATCcccttt
gaagaaaaaattagctaattgaagaaagaaaccctttttattttgaaaat
ttgtacatGTAGAAGTCAAAACATGTAACGAAAATATTTTGcggagaaaa
gaaaagaaaactccAGCGATTTGACAGAGTATCCCATTAAATTTTGAGAC
AGATAGCCAAAGGACTAAGGGAGCCTTTGAAGGTATACGGAAGCTAAAAG
GGAGCTTCTATGGTATtccaaagaataaaaagaaattctttgacGGTGGT
TAGCCAAAGACTAAATGGGAGTCTTTGATGAAGtacttaaaagaaaaaaa
tttgaccgGTCCGCCTAGAGGCGAATCCTCTATGGCACAAATCCCCTTTG
ACCCAAATTATGTAATTATGTCAACCCACGACAACTTAAAAGTACCACGA
CGCCACGCACTGGGTGCAATCAGAATGCATCTAGGACAAGAGTGGGATTC
AACGGGAGAGAAGACTCATGACGCAAGGACTGACTCTGTTGACCAAGAAT
CACGGGAAGAGATGTACAAGAATATCCAATATCGAATCCAAATCGCCAAG
CAAAGTATCAGCGAGTTGTCTAATGGCCAAAGACAATACGTCAATACCTT
GAAGGATATCACCTGAACATTGGAACAGAAGATTGAACAAGGTCACGGAC
AACCAGAAGAGCCAGGAACACCTTCGATCCCATCGATTGAATCCCTACAA
CACAAAGGATCACAACAAGAAGAAGCCCTATCCAAAGAAGTCAACAGGAT
CCTTCAAGAACTAAAGAACTTACAAGAAGAAGTGCAATTTGATAGCACAC
CCCCGTCCCTAAAATTGAGAGACGAGCTTGAAGAAGCTTTCGAATCTCTT
AAGAAGTCCCACCAAATCTTAGAACGATTCGTTGAAAAAACCAAcaaaaa
ccatgaaaatctCCTAGAAAGATTACGACTGGAAACAAATGACCCAGTCA
ATCGTGGAGAACCCTTCTCGTCCAAAACCCCATTCCCTATTGACATTTCT
ACCCCTGCTATTCGCGGGCTTAGAAGTGACAGTCAAAAACCCAACCCTAA
TAACACAATGAAAATTGTGAAAGAGTCGAATCCAATGTCAGACACAGTTT
TACTTACCTCCCTACTTGCCAATAGAGTGGACATTGCTTCCCTCCCAAAA
TTTGGTGCCCAATCAGATGAAGACATAGTTGAGTTTTTGACCAAACTTGA
TTTGTCATTGTCATTTTACCAATTAAACGATCAGCAGAAAGCAAGAGTAA
TACCTCTATTATTAAAGAATAGAGCGTACACGTTCTTTTTGACCCTAACT
AATAACTCGAAAGAAGACTATAAGAAGTTATCTGATTGTCTTCGAAAAGA
ATTTGACGCTCCAGAATTGAAATATCGGAAACGCCAAGAGCTACACGGCA
TTCAACAAANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNGAACCTTTTAATCACCTTAAAATGACCTTCCTCTATGTTTTCCT
GTTCAGCCTTCCTTATGacaatttttatgattttgttattttgaaatatg
aaagttAACCCCATTAACCCCCACTAGGATTATATAATCAAGtaattaag
ttttatttttaggagTAGGGACCTAGTATATATAGaggtcaatttttctt
ttataaggagGTTAGTGAAGTCAAATATTAGAGCTTCAACGATTAATTTC
ATAATGTAAGTGTAACTTTTCTTTTGTAACTTTAGGAGCTGGTTATGTCa
aagattatttttataggGAACTGACTTTGTCTAAGTTCATTCTGTACTCG
TCTccccttttgttttgtttactcTATCTGTTCATGAAATTAAGTAAGTT
CAGATGGNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNC
cttgagtttgaatttcttaaaataatgttttcaaGATTATTTCGACCAAT
TTATCTAAAACCCCTTTTCGGATTTTCTCTGTTCTGATGCAAATTAGATT
TTATAAAGGTAGGACAGGTAGGGCCTCGAcacactcaaaacaaaaattcc
attttcaaaTAAGAGAAATAATTTTGAGTTTGTACATGACAGAAGTTTAA
ATCACACGAGATTCAAATTAGAATTATCCTGAACAAGTTTGGTACCAATA
ATCATCGATCTCAACAACTTTTTATAGGGCATCACAAGCCAGGAAGATTA
TTGAAGAAAAACAAGATGAGATAGTGAGCTTGcgtaaagaaaatgaagat
tgcaGGAAtaggtaaaaataaaaacttctccATTTTCATGCATTGACTTT
CATTGATTTCTTCAGTTGTCGTCTAGaacttacattttattttttaacca
ttttttagGATCAGTTCTATGATGATGTCTCAAGAGGTTGGCACaacatc
ttcaaaaaatttattgGACATTAACCGATTATTCAGATTACTCTATGTCA
ACGAGTACAAGTTTCTGTGACCAGAAACACAAAAAAGGAGTTCCTTTTGG
AGATGatcttaaaatttgaaatttttctgtaTAGACTTTTTACATGAAAA
AGTCTAGCTAAAATGTCAATGTAGTGAATTTATGTTTATGCAggtatatt
ttttgactttatattttttactaaaatatataactactagccggtacccg
gcgtcgcacgccggttaagctgtagctgaacgcactaaaagtcctttgga
tatTAGTATATAATTATAATGTTTAATAAGCATATTCAGGGTTCGATTTA
TAAATTTTAAGGAGCTTTGCTGTTTTTCAAGTGAAGCAAGCTTAAAAAAA
TGGAGCTCAGGCATatttttttcactgtttgcgaagtatttttagtattt
tgcgatGTAGTTTGGAAGAAAATGTGACAGTATCTTCAATGCACCAAATT
ATCTTTCTCTTcctattttttgttgttgtcgATGTTACGTGTTGGTTTAT
ATTCAAAAGCATTGTTATAACCGGACCTTTGTTGCGCTTTTGGTAATGCA
GCGTTGCTCGGTGGAATATCTTTTCACTCGATGAAAGATTGGATAAGTGT
GTCTGAATTGAAAGTGGGATCTGCTTAATGATGTTGGGAGGGTTGTTTGA
CTGCACGTGAACGTAATTGGTTTCGTTATTTGGCTTGTGGTACGGTCGAT
ATGTACTAATTGCTATTGTCAAACGTTACATCAAGGTAGTAATTCACTGT
CGTCATGTTACATTGTATGACAATGTCTAGAATAATCGAAGGCATAAAGC
AACCCACGAGCTCGCACACCTTGGCATAGCCCTATGCACATTTACGTTAA
GGGATGGAACCTTGTGCGGCCGTTATGGGGAGTGCCTTAGGTACCCCGAG
TCTTAAGCTTAAGAATCGTGAATTCCCCTCTAGctctttatgtttttatt
tgaaaattgtgTAAAGAGAACTTTCACANTAAGCTTAAGAATCGTGAATT
TCCCTCTAGCTCttctgtttttatttcaaaattatgtAAAGAGAACTTTC
ACAAGTCgtcaaaatgaaatattttccgACTGGCCTCTAACATCGAGGGT
CGGCTGAtggcaaaccaacatttttaagtccagcctaatGAAAAATTTTC
TACCTTTATTATTCACTTTGCAAGTGAATGTGCCTTCACACAGCCCATGT
AAGGGGAATAGGGTTGACAGAAACTCAATAAGCCTGTTTATAACTGGGCT
AGGTATTGATTCCATAATACGCCATGTCCTTGTTCTCTAGTGGTTCACGC
TGAATTAACGCACTTAATTCAAAAACTGTGTGTCAATGTCTGGTAAGCTG
GCAGGCAGTAAAACTAAAGCATAAGACGGTTCTAATCTTCTAACGAGAAG
ACTCCTAATATGTAATGTATCGCTTTTTTAGTTATTTTATATGATTTGTA
AAAATACcatatttttatgtaatttgtACACGTTCACACACATCAATAAa
ttaaaatactattttttcactaattttatttattattatttgttttgttt
atttatttcaatttatttttaagtaagtaagtaagtctgcgactgcAGTG
GGAGGCTACCCGAAGGTTCCTcattcgatagctatctacccgaaggtagg
ggagggcgccactctttctccctggattactCCCCTTACCTTTGATCCTT
GTCTTAATTGCtgaacatcaagcagagaggcatcgagTACCATTTTGAag
atctttggtatgacccgactgggggttgaacccacaaccttgcgcaccat
agctggatgctctaccactacaCTATGGTCGCTAGTGTAGGGATATAAAT
GCTGTTTACCCatttattattactattatttatGAAGCCAAGATATTCCT
GTCACGGTTGCCATATATTGTCATTCAGTTTTAGGAATCTCTCTAATCAC
AGTTTTTGCTTTAGAAAGAAGTCATTATCCTATTGCATGCAGCTACTGAG
TATGTTTTCACTCAATGTATCAAAATGTTGAtccattaaaccttttgttt
aatttctctttttagatagaaaaaaaatatgaaaaattatgAATGAAAAC
CTCTAGTTGTAAAAGCTGAAAGTACGATTTATTTTGGTTTCAAATCTTCA
AATTGGGTTAAAAAGTGTAAGTGTTTATCTCATTTTTTTCTGAGATATTT
TTCCTTGTATGCTTAAAAACATGATTAAGTGGTTACaatacaaaagtttt
tttttttgactttctaCCATACTTCCATGAAAGCTAAATTTAAAGGGGGG
TGCAACATTTGAAATGCTTAACATATTCAGAGCCTGAACCattcatgttt
ttaaaaacaccttGCTTACCTTGTTTGCAGAAAACACTTTCAAGCATGAA
AGgttcaattttaaaaacaccATAAACACTAAATGTCCTGTCGAAGGCGA
CTGCTATAAAACAAGTCCCGACTGGCTGAAACGGTATCGAAAAGTCCCAT
TTCCCCgtttttttttccgattttctagCCCGATTTTTAACCcgattttt
atctgattggttCAGTCAGGAcactgcaagagcttcaaaatcgTCTTGAA
AAATACCAGGAACACCAGGAAAAAGACTGAATGGTTCACAAAATGGTGGT
GTTTCTgggaaatggcatttttgcctGAGTTTCGTGGGGAAAATTGAGAG
TTGATTTATGGAAATACCAGGAACACAGGAAATGCTGGAAACACACCACC
TCGATAGGTAAGGTGTTTCTGGTAAAatgtttttgccaaaaacacccAGA
AAACcatgaaaggttcagaaaaGGTGTTTCAGGTAAaagtgttttcagtg
ttttcgggacttttttgacatgaaaggttcaggctctCAAACCCATGTGC
CATATAACATTATGAGCATATATTATTTTATAGTATTGGGTTATGATGAA
CCAAGCAGCTGCCTTTCTCAAATCAAACTTATATACCAACCCTACAAATT
TCATTGATGTTGAAAAATATGTCAGTCTTCTTTTGGGTTTTGGGGAAACC
CACTTGGAACATCTACTTGCATACTTACAACGCTACAATAAATCTATGGG
ACAAATAAAATCCATTGATGTATTCATCCGAAAATTGGATCGTTTGGTTT
GCACTTTTAACTATAAATTCCGTACAGCACTTGATATCGATGGACTTTCA
ATTATTGTGTCTTATTTCGAGGATGTTCTATATTATGTTGGCGAAATACT
TGTTGCTGCTAAAAGAAAGCATGAGTTTGAAAAAGATTTGGAGTTTTGCA
ACGAGGCATTGCAATTGTTCGCAAAAGTAGTTGGCAggtatagaattttt
tttcaactacTGTTAGAAAATACCTTAATGCCCTTAATTTTTGTGCGCCT
TTTATTTTCGAgccctttaattttcgcgcctttaattttcgcgcacccTT
TAAAAATTACCTTTTGCGCACccctattattatcaattttcgCACATCCT
AAAGTTTGTTTctctttacatatttttttctggCCATTTTCCAGTCAAAT
CCTCATGAAAAAGTctccaaaaggcggacactctaattagcggacactaa
tcTGTTCCAACCTATTTTCTTCTTTCTATACTCTTATTTTTGGTGAGGGG
CGAGAGCAAAGAGAAGAGGCTATCCTTAGAAAAGCTATAAGTGActtaaa
attctttatttgctaaTTCGCCCACATTTGAATTTTCGCGCAGCCTATTG
CGCAAAAATAGGCCTTTTCGCACACCCTTTAATTTCCGCGCAGTGGTAGT
GCGCGAAAATTAAGGGCATTCAGGTATCAAGAAATTGAATTATGactaaa
ataatgttttttgcCTCTGTGAGGGAAACAATTGTACAATTCACGAATCT
TTTTGTGCTGGaaagtcaaaaacaaaattttcctgATACAGCGCCcaatt
cataaacacaatcacgcaactttgttgtcattcccagtccttttagacga
gcGCGGTCCTTATGATTTTGAGATAGCATATTCgtaaattgtttttgttt
tcaaccatccctttagagcttcagcgtggtgggtagaaaacaatcacaat
ctgatctcaggacCTCATCCTCACCCTCATTATTCTGCAAGCATAACAAA
TATTTTCTAACGCTTTTTTTACTTTACAGATATTCTTCTGATTCGAAGAA
TGAGATTCATTTTCAAATTGGGAATTCCAAGAAGACAAGAGGGTTTGAAA
TAGGGGAAATGACACTTTACATGTACTATCTTCTTGATGTTGGGTCAGCC
GATATGCAGTATGTAAAATATGCCATTGAGAGAAAAGGATATGATGACCT
ATTTTATAAAGAAGGAAAAGAATGTAGACAGGCAATGGAAAAACTAAAGG
GATTTATATCCGCtgatgaaattaaaaataatttcttgataCAAATCAAT
ATGAATTTCAAATTCATGCTGAATCAAGCAGCTCAGTCCTACTCTACAAA
TGATTTGTCATTCATAGCAAAGATACTTCATTGGTCAAAACAATTGCTTT
CTTTATTGAAGGATGTTCACAAAGACAAATTGAGGTACAGATATGTATTA
ATGTATTAATTCAATTCATTGCAATGTGTCTTGAGCATTGAGTTCAAAGC
CCATCTTGGATGTGAAATTAGGCCACTTATTTCtcattgaaaatgtttga
cccGCTTGGTTTCGGCCAAACTCTGAATTGAGAGAAAAATCCATTGCATC
ACCCCAAAATGTGGCATAAATCTctaagtttcatttttctttgctttgga
attgttgaagattcctctctctcccttttgtatttaaaatcaatggtcct
gaacctaaCAGAACAGAGTTATTCTTCCAAAAATTATTCTTGTTATCAAT
AATCATAAAGATATAAAgcattttttattgaattttcatCTACTGTTTTT
CACATGTCCCTGAGCAGAATTAAACATTTCTATTCCAAGAGGCGTAAAAA
TTCATCTAACATCCTTAAATTCtgttttaacaattattttgaatttgtct
tTCAGGAAATTGGAGAATAGGAAAGAACCAGAGAAGAAGAAGCAGCCAGA
ACAGGAACAAAAGCTGGAAACTACTACAGCACAAGATATCAAANAGAAGA
AGAAGCAGCCAGAACAGGAACAAAAGTTGGAAACTGCTACAGCACAAGAT
ATCAAGAACAGTGTTCGTACAGTGACCATGGAGAACAGTTCAAAAGATTT
AATCGAAACATTAAGAGGGAAACATGAGCAACTACAGTCTGAATTGAATC
GTGAGCGCAAAAAGTTAGTAGATAACATCTATAAAAAATCCCAAATAAAT
CAATAATTTGCTGTGTGTATATCTTTTTTGGAAGTGATCTCTGATTTAGG
TTAGGGCTTATTCCCACTAGGAAAGGAGTGTTTCTTGTCTTGTCTTATAT
CTTTTAAGAGAACTGTTTTTTGAAAAGGTTCAAATCTTCCTGATTTTGAC
ATATATATTTAAGTTACTGAATAAAACATAAAATGccaaagattttttga
agcaaaaatttaagaaataaaactattttttattgttttcaggAATTGTG
ATCTTCATGAAGCTAATCGCATTGCTGAAACCGAGTAAGAGGGGTGACCT
CAACCTCCATAAAAAAAGAGAATGTTTATActtaaaacctaaaaaatatG
TATTACATGTCTTTTTGATCAAAAATCGTGAtgctaatttttatttattg
aatatttttgtttaacactcaaaacaaaaattccattttcaaataagaaa
aagaattttgagTTTGTACATGACAGAAGTTTAAATCACACGAGATTCAA
ATTAGAATTATCCTGAACAAGTTTGGTACCAATAATCATCGATCTCAACA
ACTTTTTATAGGGCATCACAAGCCAGGAAGATTATTGAAGAAAAACAAGA
TGAGATAGTGAGCTTGcgtaaagaaaatgaagattgtaGGAAtaggtaaa
aataaaaacttcttcattttcatgcATTGACTGATTACTCTATTAGACGA
TTTCTTCAGTTGTCGTCTAGaacttacattttatttttaaccatttttta
gGATCAGTTCTATGATGATGTCTCAAGAGGTTGGCACAACATCTTCACAA
AATTTGTTGGACATTAACCGCCCAAGTATCGTCAAAGATAAATTCAGATT
ACTCTACGTCAACGAGTACAATGATGTTTTGAGCGCATGGGATCAATTGT
CTGAAAAAGAATGTTCTGATTATCTCCTGGAGATTTTGTTTGTAAGGATC
GGGTTCTAATTTTTTGTAGCTTTGAAAAGTGAATACTACTAAGTACAAAT
AATAATACCATTTTATGTGGCatatatttttgagtttttaggtATTCAAT
GACAATTGTTGAATTAGATTTGTTTAATGTTTCATTTTAGGATGCAAACG
ATTTATGCAACCAATATGCTAATAAATTCACCGGAGATGTCACAAACTCG
CTTGAGTGTATTTTCAAgaaggttgaaatttctttgtatttataAGTTTG
ATTATTTGACCCATCTTTGTTCGGTGAAAGTGATATTATGTGCAACTAAA
TTgcttattattttatttaccTGACAAAACCTTTTCAAGATTTACTACAA
TTGTTGCTGCCGATGTAGGAATACATCTATGATAGACCGACTGCTGTTGA
AGGCTGTCCAGGCTGTCGTATCTTGTATACATCCTTTAGCTCATTGGCAA
ACACAGCTATTTTAACATCTTAACAAGtggactttttttaaaagaacaaa
ctagATTGCGCCTTCCAAAAAACAGCAGacagaacaacagcaacaaaatt
taatttggcaattCAATTTGCTTTTAGATGCCATTTTCTGCTAATAATAC
CTACAAAGGGAACAAACACATTTTGGAATTTATTCACGAAAATTTGAAGA
ACATGCCTCATGAAAGTATTCAAGAAGAATTCTGCAACGTAAGTGAATAC
TTAAACAAGATCTTCTCCTAGGCTGGGAGAATTTGAAGGTTTTGAAGAGC
TTTTAATACTGATTTTATACATTTTNAATTCAATTTGCTTTTAGATGCCA
TTTTCTGGTAATAATACCTACAAAGGGAACAAACACATTTTGGAATTTAT
TCACGAAAATTTGAAGAACATGCCTCATGAAAGTATTCAAGAACAATTCT
GCAAAGTAAGTGAATACTTAAACAAGATCTTCTCCTAGGCTGGGAGAATT
TGAAGGTTTTGAAGAGCTTTTAATACtgattttatacatttttatttGCT
GTTGAGAGAGTTGATATTCAATCATGCTATAGATCCCACGTTGAAATGGT
TATAGAAATGTTCCATAAATAATTttctaatctatatattaatagcggta
atctgtatgtctgttttccgtgtgtcactttcgttttcgcaagcaatgtt
tttgttctcgataagtttgttttgattgatggatcggatagagcctggtt
tagactttattcagcctttgtttagAAATTCAAGGCCCTTCTacatttat
taattttaatttctgccttgGCTTGCCCatccctttgtttttctcttgcc
tttgttttaatgttttcgaatgtaattaacgatcgtatttattaataaca
ttcgaattctttttaaaactaAACAAATTCCTTTTACAGAaatgaacatt
tcaaatgtaaatcaaaacataaaaatcaaaaaatttgtcaacaacaacag
cattcaaagggctaCATCTTAACCGGCATGCGaagccgggtaccggctag
ttttcTTTAATCTGACTATTCAGGGGTTTAATGCGGTCCcccattttata
atttttgttataGCTTGTGCTCCAGAGACATGAAAAACGAAATCCAGAAT
TAGCTCAGGAGAAATATGATGAGATGATTTCAAAGTATATCATGGGATGT
GTGTCGGTGACTTGGTTAATGAATTGCTGTCTACCGCCCATCTATATTAC
CAAAgatgtcggggaaaaattcaaCAAGAAACTTCATACAAAGTTCAGTG
GACGTGGTGATTATGTTCAGTTTTATTTATGGCCATGTTTGTTTACATCT
GAAGATGAGTTCAAATCTGGATTGCCAGCATTTGCCAAAGGTGACGTATA
TGTTGGGAAGAGGCCACCTTCTTTAAAGGGGAAAAAAGTGGAggaagttt
caaataaaaatgttccAGTTGAAGAAACACAATGTAAAAAGATCAAGAGT
AAAGATGTAGCAACTGGTCCTGGAATTGCCGTCCGTGAGAATTGTGTAGC
AGAGCCAAAGATTGAccaaaagaaattgttttaCAGTCCAATGGAAGAAA
AGAGAATCGTAGAAAGGCTACAATCAAGTGGAAATGATCCACCCAAGGAT
GATGAAGTTATCCAACTGGCTGAAAAACAGtcaaaacaatcttccaaaga
TGGTATAAAAGAAAGTAGCAAATCAAACCTAAATGATTCCAGCAGTTCTG
CCCTGAAAGGCACTGACAAGTTTGCTGAAAGAGgtgaaaaatttcagtca
gAGAAGAAACAAGAGCTACTGGTCCATTACAAATCTGATGAAATTTCTAT
TGACCCACAAGATCAGTCTCGCAGTCAACATTCTGAGCGACAAAATGACC
ATGACGAAGACGTCAGTGATTCTGGAAGATCTGACACACCAACTCCAATG
GAGATAGATGAAAAGCCTCCTAGAGAATCTAAACTGCCAGAATTGTATGA
AAACATTAGTGGTATTGGAACAAGAAAACCCTCAAAATCAGATTATGGTA
AATCCGAAGTCAAAACAACAGGGACTGTTATTAAAACTACTAAAGTTACC
ACGATTACTTATAGTAATGCTGCTAAATTAACTCGACCGCCTATCCGAAG
CTCCACTTCGCGGCGCTAGTTAAAACTAATGATGTTTTAAGACTATAAAA
TAATTGATGATTTTAAATAcatcttttctattttgtattttttgttaagg
gataatttgaaataaattttgttgactttttgttgagttttttcatgaaa
ttacaTCTTATGTTTTAATACTTTTGGcgcacttttttattttttcacat
aTATAGCTATCAGAGTTTATTATGGTAATTTATTTTGCTAGTTTTTGTAA
ATTGGCTGAAAAAAGTCATTGTAATTTTCCAATCTCGAAGAAATCTTTCC
CCAGGACCAGTGGTTGGTTCAGAAAGTGGAGCCTAAGCAAACGCAACTAT
TTTTATAGATCCACAAACCCAAGTCGCCCTATTCCATTCTGATTTTGCGC
CAAGAGTcttaatcagatggtttgagatatttggacTGTAGATTATTTCT
ATTTTCGTGAACAAAACCCCAGAATATTTTTTgccaaacttttttccaaa
atcaagttaaaagttttttttggcttttagtgAGAAAACCATAGAATTAC
AAAATGGAAGAATTCATAGAGTTTCCAAATTGTTGTAactcaacttttg
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_003776XLOC_003776Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00006752-exon-sc0000070-1491911889:327057..327071TCONS_00006752-exon-sc0000070-1491911889:327057..327071Clytia hemisphaericaexon
TCONS_00006752-exon-sc0000070-1510915933:327057..327071TCONS_00006752-exon-sc0000070-1510915933:327057..327071Clytia hemisphaericaexon
TCONS_00006752-exon-sc0000070-1575043694:327057..327071TCONS_00006752-exon-sc0000070-1575043694:327057..327071Clytia hemisphaericaexon
TCONS_00006752-exon-sc0000070-1491911889:327558..327965TCONS_00006752-exon-sc0000070-1491911889:327558..327965Clytia hemisphaericaexon
TCONS_00006752-exon-sc0000070-1510915933:327558..327965TCONS_00006752-exon-sc0000070-1510915933:327558..327965Clytia hemisphaericaexon
TCONS_00006752-exon-sc0000070-1575043694:327558..327965TCONS_00006752-exon-sc0000070-1575043694:327558..327965Clytia hemisphaericaexon
TCONS_00006752-exon-sc0000070-1491911889:328441..328635TCONS_00006752-exon-sc0000070-1491911889:328441..328635Clytia hemisphaericaexon
TCONS_00006752-exon-sc0000070-1510915933:328441..328635TCONS_00006752-exon-sc0000070-1510915933:328441..328635Clytia hemisphaericaexon
TCONS_00006752-exon-sc0000070-1575043694:328441..328635TCONS_00006752-exon-sc0000070-1575043694:328441..328635Clytia hemisphaericaexon
TCONS_00006752-exon-sc0000070-1491911889:338849..338890TCONS_00006752-exon-sc0000070-1491911889:338849..338890Clytia hemisphaericaexon
TCONS_00006752-exon-sc0000070-1510915933:338849..338890TCONS_00006752-exon-sc0000070-1510915933:338849..338890Clytia hemisphaericaexon
TCONS_00006752-exon-sc0000070-1575043694:338849..338890TCONS_00006752-exon-sc0000070-1575043694:338849..338890Clytia hemisphaericaexon
TCONS_00006752-exon-sc0000070-1491911889:339168..339251TCONS_00006752-exon-sc0000070-1491911889:339168..339251Clytia hemisphaericaexon
TCONS_00006752-exon-sc0000070-1510915933:339168..339251TCONS_00006752-exon-sc0000070-1510915933:339168..339251Clytia hemisphaericaexon
TCONS_00006752-exon-sc0000070-1575043694:339168..339251TCONS_00006752-exon-sc0000070-1575043694:339168..339251Clytia hemisphaericaexon
TCONS_00006752-exon-sc0000070-1491911889:339358..339547TCONS_00006752-exon-sc0000070-1491911889:339358..339547Clytia hemisphaericaexon
TCONS_00006752-exon-sc0000070-1510915933:339358..339547TCONS_00006752-exon-sc0000070-1510915933:339358..339547Clytia hemisphaericaexon
TCONS_00006752-exon-sc0000070-1575043694:339358..339547TCONS_00006752-exon-sc0000070-1575043694:339358..339547Clytia hemisphaericaexon
TCONS_00006752-exon-sc0000070-1491911889:339697..339777TCONS_00006752-exon-sc0000070-1491911889:339697..339777Clytia hemisphaericaexon
TCONS_00006752-exon-sc0000070-1510915933:339697..339777TCONS_00006752-exon-sc0000070-1510915933:339697..339777Clytia hemisphaericaexon
TCONS_00006752-exon-sc0000070-1575043694:339697..339777TCONS_00006752-exon-sc0000070-1575043694:339697..339777Clytia hemisphaericaexon
TCONS_00006752-exon-sc0000070-1491911889:340351..340461TCONS_00006752-exon-sc0000070-1491911889:340351..340461Clytia hemisphaericaexon
TCONS_00006752-exon-sc0000070-1510915933:340351..340461TCONS_00006752-exon-sc0000070-1510915933:340351..340461Clytia hemisphaericaexon
TCONS_00006752-exon-sc0000070-1575043694:340351..340461TCONS_00006752-exon-sc0000070-1575043694:340351..340461Clytia hemisphaericaexon
TCONS_00006752-exon-sc0000070-1491911889:341120..342755TCONS_00006752-exon-sc0000070-1491911889:341120..342755Clytia hemisphaericaexon
TCONS_00006752-exon-sc0000070-1510915933:341120..342755TCONS_00006752-exon-sc0000070-1510915933:341120..342755Clytia hemisphaericaexon
TCONS_00006752-exon-sc0000070-1575043694:341120..342755TCONS_00006752-exon-sc0000070-1575043694:341120..342755Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000070supercontigsc0000070:327057..342755 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
Sort Descending | Sort Ascending | Only Non-Zero Values | Tile/Chart | Reset | Show/Hide Values

Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
3.88861e-05	1.37302e-08	0	0	0.00492664	0.0005934	0.684583	9.28979e-08	1.85849	3.50821	0.0649425	1.28739	4.47316	2.6656	7.28149e-09	0	0	0	4.25577e-10	0	9.10354e-09	0	0	1.64817	0.650549	0.562963	1.55419	1.02284	1.64363e-05	8.05338e-07
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00006752 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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