TCONS_00006748 (transcript) - C. hemisphaerica

Overview
NameTCONS_00006748
Unique NameTCONS_00006748
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length755

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00006748 ID=TCONS_00006748|Name=TCONS_00006748|organism=Clytia hemisphaerica|type=transcript|length=755bp
GGTCAAAACAATTGCTTTCTTTATTGAAGGATGTTCACAAAGATAAATTG
AGGAAATGTGAGAAAAGGAAAGAACCAGAGAAGAAGAAGCAGCCAGAACA
GGAACAAAAGTTGGAAACTGCTACAGCACAAGATATCAAGAACAGTGTTC
GTACAGTGACCATGGAGAACAGTTCAAAAGATTTAATCGAAACATTAAGA
GGGAAACATGAGCAACTACAGTCTGAATTGAATCGTGAGCGCAAAAAgaa
TTGTGATCTTCATGAAGCTAATCGCATTGCTGAAAAAGAGGCATCACAAG
CCAGGAAGATTATTGAAGAAAAACAAGATGAGATAGTGAGCTTGcgtaaa
gaaaatgaagattgcaGGAAtagGATCAGTTCTATGATGATGTCTCAAGA
GGTTGGCACAACATCTTCACAAAATTTGTTGGACATTAACCGCCCAAGTA
TCGTCAAAGATAAATTCAGATTACTCTACGTCAACGAGTACAATGATGTT
TTGAGCGCATGGGATCAATTGTCTGAAAAAGAATGTTCTGATTATCTCCT
GGAGATTTTGTTTGATGCAAACGATTTATGCAACCAATATGCTAATAAAT
TCACCGGAGATGTCACAAACTCGCTTGAGTGTATTTTCAAgaagATGCCA
TTTTCTGCTAATAATACCTACAAAGGGAACAAACACATTTTGGAATTTAT
TCACGAAAATTTGAAGAACATGCCTCATGAAAGTATTCAAGAAGAATTCT
GCAAC
Run BLAST on NCBI

transcript from alignment at sc0000070:322777..340244+

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00006748 ID=TCONS_00006748|Name=TCONS_00006748|organism=Clytia hemisphaerica|type=transcript|length=17468bp|location=Sequence derived from alignment at sc0000070:322777..340244+ (Clytia hemisphaerica)
GGTCAAAACAATTGCTTTCTTTATTGAAGGATGTTCACAAAGACAAATTG
AGGTAagattgtctttttttttggtagTTTTCGATAGCTATAATTTTTGT
AAGATTGGTTCATAAGAACTAGACTAACAGAATATGAATTTTGTCTTCAT
TGTTTTTAAATCTTCAGAGAATGTAATCAACCAGAACAGCAGGAAAAAAA
GTTGGAAACTGCTACAGCACAAGATATCAAGAACAGTGTTCGTACAGTGA
CCATTGAGAGCAGTTCAAAAGATTTAATTGATACATTAAGAGGGAAACAT
GAGCAACTACAGTCTGAATTAAACCTTGAGCGCAAGAAGTTTGTCTTTTC
ACttcaaaattataattttcaattaaaaactCACTCTTTGTTCTGCTTGT
GTATGCTTTTCTTTACAGTACTTATGCTAGAAAACAGATTATATACTTTT
CTTTAAACTCATTAAATTTTCAGACAAAGTTGATATTTCGTAAGTTTCCA
CTATATTGATtaccttttatttgaaatttcatgTACATAACAATTTTGTG
TGAAACTATTATCAGAGTCCTCAAAAATAACAATATCAACATTTTTAAAG
CAAATACCAGTAAAAGATTCTAATAAAGATCTGTTTCACGGTGtgatttt
tcagaaatacaGAAGCCCAAATGTTGATTgaagaacaaaaaaacaaaatt
gataGACTTAGTAAAGAAAATAGAGATTTTCGCAATAGGTTGGtataaat
ttcatttatttcCAATTCCACTTTTGTTAATTTTCTTATTGATGATCTCT
ATCGTGTCTGTCTTGGCCTGTTATCGGGGTACCCAAGGCACTCTCCAATG
GCCGCACAAGGTCCCACCCCTTAACGAAAAAgtctttttaggtttttcaa
AGTGTTTCGATATAGAAAAAGAGATGGAACATGGTCAGATGGTCCCACTT
GCTctttaattgaaaattttttgacaaaaacctcaatttttcccattttg
atgacgtcttACTATTATAAAGGAAATCTTGAATAACTTGAAGAAGGAAA
aaacttttcgatttttcgATTTCGCAGCAAGTTGGACAGTCTGACCGTGC
TCCATCTCATTTTCTATATCGAAACGCTtcgaaaaaacttgaaaaacatT
AACTAGTTTGAGTAAACAAAACGAActaagttaatttcatactcaaagtt
tcatgccacCCAGGATGGCAATCCTCAGTGAAATAAATGTTCTATAAAAA
TCAATAATTTGATGTCTTCAAGAAATTTTCTGACgtcaattcaaaattca
aaattatttgaaagTCTCGAGGAGAAATAATTTCCGTCTGCGACGGCATT
TGGCGATGATTCCAGTTTGCTTAATTCACAAGTTCTGACCCGGAAAGGGG
GCAATCTCCTGCAATTTCTCCTGTAAGCATAATAAACAGTTGTTTGTTTC
TGGGGTATAAGCTCTTTTGTGGCACACTATTTTTCAGCTAAATGTCAGGT
TTCCATTTTCTTTCATGTTCCAGAAGTCTGTTGAAAGGGTGTTATTGAAG
TTCTTGTTAGTCCGGGGTTAGCTTGTGTGTacagaaatgtttttttaaaa
aagtataaCCGTACAATCCGATATATTTCTTTTCGGTGTTGTTCTTCTTG
CTTTGCAGTTCTGGTCAAGCGGCTTTGGGTTTGTGATTTTCTTGTTGTGC
TTATTGAGAACCGACTTCACTTTGGGCATACAGAACTCACTTTCAATGTT
GAGGATCTTGTAGTATTTATGCCCACGCAGAAAGTGCTTCTGGATTAAGT
TTAAGAAAAACTTCCCGATATTTGTTGACAAGTTTGCATTATATATACGG
TGGATTGAACCAAATTATCTTTCTCTTCCGATTTtttttgttctgttgtt
gatgTTACGTGTTGGTTTATATTCAAAAGTATGGTTATAACCCGACCTTT
GTAGTGCTTCTTGGTAATGCGGTGTTGCTTGGTGGAATATCTCTTCACTC
TATGAGATTGGATAAGTGTTTTTGAATTGAAAGTGGAATCTGCTTGATGA
TGTTGGGAGGGTGGTTTGACGTTATTTGGCTTGTGGTCGATATGTACTAT
TTGTTATAGTAAAACGTTACATCAAGGTAGTAATTCACTGCCGTCATGTT
ACATTGTATGACGATGTTTAGAATAATCGAAAGCATAAAGCAACCCACGA
GCTCACACACCTTGGCATCGTCCTATGCACATTTACGTTAAGGGGTGGAA
CCTTGTGCGGCCGATATGGGGAGTGCCTTAGGTACCCCGAGTCTTAAGCT
TAAGAATCGTGAATTTCCCTCTAGCTCttctgtttttatttcaaaattat
gtAAAGAGAACTTTCACAAGTCgtcaaaatgaaatattttccgACTGGCC
TCTAACATCGAGGGTCGGCTGAtggcaaaccaacatttttaagtccagcc
taatGAAAACTTTTCTACCTTGAGATTTCCTGTATTTTAGGATCAGCAAT
TACCAACAGATGGTTCTCAAAAGTTTTGGCCCTTTGTTAGAATCTCAAAC
AACTGAAGAAGAAAGCGAAGAAAAGAGTGATGGTGGACAATGAAATGTCT
GAATGTAAAACCCTATAGTGCCTTATACTGTTTATCAATCTTGACTGCCG
TCAGggaggtcagggttcgattcccactggATGCTAttattcacttggca
agtgaatgtgaAGGGGAATAgggtagacagaaactcaatAAGCCTGTTTA
TTACTGGGCTAGGTATTGATTCCATAATACGCCATGGCCTTTTTCTCTAG
TGGTTCACACTGGATTAACGCACTTAATTCAAAAACTGTGTGTCAATGTC
TGGTAAGCTGGCAGGCAGTAACACTAAAGCGTAAGACGGTTCTAATCTTC
TAACGAGAAGACTCCTAATATGTAATGTATCGCTTTTTTAGTTATTTTAT
ATGATTTGTAAAAATACcatatttttatgtaatttgtACAGGACACGTTC
ACACACATCAATAAattaaaatactattttttcactagttttatttatta
ttattcgttttgttattatttctatttatttttaagtaagtaagtaagtc
tgcgactgcaatcggaggcgacccgaaggctcctcattcgatagctatct
acccgaaggtaggggagggcgccacgcTTTCTTCCTGGAttactccactt
acccttgatcattctcttaattgctgaacatcaagcagagaggcatcaag
taccattttggaaatctttgatATGACCCGACTGGGGTTTGAAccaacaa
ccttgcgcaccatagccggatgctctacacTATGGTCGCTAGTGTAGGGA
TATAAACGCTGTTTACTCatttattattactattatttatGAAGCCAAGA
TATTCCCGTCACGGTTGCCATATATTGTCATTAAGTTTTGGGAATCTCTC
TAATCACAGTTTTTGCCTTAGAAAGAAGTCATTATCCTATTGCATGCAGC
TACTGAGGATGTTTTCACTCAATGTATCAAAATGTTGAtccattaaacct
tttgtttaatttctctttttacatagaaaaaacactaaaaattataAATG
AAAACCTCTAGTTGTAAAAGCTGAAAGTACGATTTATTTTGGTTTCAAAT
CTTCAAATTGGGTTAAAAAGTGTAAGTGTTTATCTCATTGTTTTCCGAGG
TTTTTTCCTTGTATGCCTAAAAATATGATTAGAAAATTTAGTGTCGATTC
AATACAAAACTTTTCGTGTGACTTTCTACCATACTTCCATGAAAGCTAAA
TTTAAAGGGGGGTGCAATATTTATAATGCTTGATAAGTTTCAAACATATT
CAAACATTTGCAATATAACATTATGAgcatataatattttttagtattGA
GTTATCATGAGCCAAGCAGCCATTCTCAAACAAAACTCATATACCAACTC
TACAAATTTCATTGATGTTGAAAAATATGTCAATCTTCTTTTGGGTTTTG
GGGAAGCCCACTTGGAACATCTACTTGCATACTTACAACGCTACAATAAA
TCTACGGGACAACTAAAATCCATTGATGTATTCATTCGAAAAATGGATCG
TTTGGTTTGCACTTTTAACTATAAATTCCGTACAGTACTTGATATCGATG
GACTTTCAATTATTGTGTCTTATTTCGAGGATGTTCTATATTATGTTGGC
GAAATACTTTTTGCTGCTGAAAGAAAGCATGAgtttgaaaaagatttgaa
gTTTTGCAACGAGGCATTGCaattgtttgaaaaagtagttgacaggtaaa
gaaatttttttcaactgcgtttagaaaatatcaagaaattgCATTATGAA
ATAAATGTTGTGTTTTGCCTCTGTGAGGGAAacattccacccccccccct
tctccCTAGCCTGATAACAGCtagtcataattttcttacgggcatggtaa
acctctgaaggcccttgaaaattagccatctgaggaaaatagtcctctcG
TGGAAAATTCTACAATAAGAATCTttttgtgcgccggaaagtaaaaaact
aaaatttcctGATACGATGCCCTATTCCTAAACAcgatcacgcaactttg
ttgtcatttcCAGTCCTTTTAGATGAGCGCGGTTcttacgattttgagat
agcGTATTCGTCAAATAGAGCTTTAGTGTGGTGGgtagaaaacaatcaca
atctgatctcagggcCTCATCCTTACCCTCATTATTCTGCAAGTATAACA
ACTGTTTTCTaacgctttttttattttacagatATTCTGCTGATTCCAAG
AGGGTGATTCATTTTCCAACTGGAAATTCCAATAAGTCAAGAGGCTTTGA
AATAGGGGAAATGACACTTTATCTGTTCTATCTACTTGAAGTTGGGTCAG
CTGATATGCATAATGTAAAATATGCCATTGAGAGAAAAGGAAATGATGAC
CCATTTGTTTATGAAGAAGGAAAAGAATATAGACAGGCAATGGAGAAACT
AATGGGGTTTATATCAGCtgatgaaattaaaaataatttcttaatACAAA
TcaatataaatttcaaatccATGCTGAATCAAGCAGCTCAACCCTATTCT
ACAAATGATTTGTCAACCATAACAAACATACTTCATTGGTCAAAGCAATT
GCTTTCTTTATTGAAGGATGTTCACAAAGATAAATTGAGGTACAGATATG
TTAATTAAATTCAATTCATTGCAATGTGTCTTGAGCATTGAGTTCAAAGC
CCATCTTGGATGTGAAAGGATGTCACTTATTTCTTATTGAAAATGTTAGA
CCCGCATGGTTTTCGGTCAAACTCTGAATTGAGAGAAAAATCCATTGCAT
CACCCCAAAATATGGCATAAATCTctaagtttcatttttctttgctttgg
acTTGTTGAACATTCCTCTCTCTCTTTTGTATTTAACTCAATGGTCTTGA
AACTAacagaatttttccaaaaattattctTGTTCTCAATAATCATAAAG
ATATTAgcattttttattgaatttccATCTACTGTTTTTCATATGTCCCT
GAGCAGaattaaacattttcttttccaATGGGCATAAATTCATCTAAcat
ccttaaattttatttaagtatttatttttaacattttaacagTTGATATG
AATTTGTCTTTCAGGAAATGTGAGAAAAGGAAAGAACCAGAGAAGAAGAA
GCAGCCAGAACAGGAACAAAAGTTGGAAACTGCTACAGCACAAGATATCA
AGAACAGTGTTCGTACAGTGACCATGGAGAACAGTTCAAAAGATTTAATC
GAAACATTAAGAGGGAAACATGAGCAACTACAGTCTGAATTGAATCGTGA
GCGCAAAAAGTTAGCAGATAACATCtataaaaaatcctaaataaATCAAT
AATTTGCTGTGTGTATATCTTTTTTGTGAAGTGATCTCTGATTTAGGTTA
GGGCTTATTCCCACTAGGAAAGGAGTATGTCTTGTCTTGTCTTATATCTT
TTAAGAGAACTGTTTTTTGAAAAGGTTCAAATCTTCCTGATTTTGACATA
TATAGTTAAGTTACTGAATAAAACATAAAATGCCAAAGATTTtgtgaagc
aaaaatttaagaaataaaactctttttgttttttgttttcaggaaTTGTG
ATCTTCATGAAGCTAATCGCATTGCTGAAAAAGAGTAAGGATGGTGACCT
CAACCTCCATAAAAAAAGAGAAGGTTTATACTTAAAACCTCAAAAATGTC
TTTTTGAtcaaaaatcgtgatttttatttattgaatatttttgtttaaca
CTTGTTGAATCACGAGCGAAGCCAGAACCCCCCCTTCTCAGGTTGTGAAA
TGTTAACGACTTTGGTTACGTGAGCTATTATGTAACAACAGGAAACCCAT
GTCCCATTTTTACGAGTCTCATCAGTGTNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNttttttttgttaatattaACTTTAATTGACTTAGAAATCTCAAGCA
AATGATTTCTCAATGCCTCTatcaattttttatcgaattatAGATATAAT
TGATCTACTCCTCTTATTTGAAACCGGATTTAATAAATCAGATATTGAAC
TTGAACTTGCCTTAATTAACCTTGACGTAGCCCCTGATGTAGGCGATGTA
AATTTTACTAATTAAAGAGAAATCccctttgaagaaaaaattagctaatt
gaagaaagaaaccctttttattttgaaaatttgtacatGTAGAAGTCAAA
ACATGTAACGAAAATATTTTGcggagaaaagaaaagaaaactccAGCGAT
TTGACAGAGTATCCCATTAAATTTTGAGACAGATAGCCAAAGGACTAAGG
GAGCCTTTGAAGGTATACGGAAGCTAAAAGGGAGCTTCTATGGTATtcca
aagaataaaaagaaattctttgacGGTGGTTAGCCAAAGACTAAATGGGA
GTCTTTGATGAAGtacttaaaagaaaaaaatttgaccgGTCCGCCTAGAG
GCGAATCCTCTATGGCACAAATCCCCTTTGACCCAAATTATGTAATTATG
TCAACCCACGACAACTTAAAAGTACCACGACGCCACGCACTGGGTGCAAT
CAGAATGCATCTAGGACAAGAGTGGGATTCAACGGGAGAGAAGACTCATG
ACGCAAGGACTGACTCTGTTGACCAAGAATCACGGGAAGAGATGTACAAG
AATATCCAATATCGAATCCAAATCGCCAAGCAAAGTATCAGCGAGTTGTC
TAATGGCCAAAGACAATACGTCAATACCTTGAAGGATATCACCTGAACAT
TGGAACAGAAGATTGAACAAGGTCACGGACAACCAGAAGAGCCAGGAACA
CCTTCGATCCCATCGATTGAATCCCTACAACACAAAGGATCACAACAAGA
AGAAGCCCTATCCAAAGAAGTCAACAGGATCCTTCAAGAACTAAAGAACT
TACAAGAAGAAGTGCAATTTGATAGCACACCCCCGTCCCTAAAATTGAGA
GACGAGCTTGAAGAAGCTTTCGAATCTCTTAAGAAGTCCCACCAAATCTT
AGAACGATTCGTTGAAAAAACCAAcaaaaaccatgaaaatctCCTAGAAA
GATTACGACTGGAAACAAATGACCCAGTCAATCGTGGAGAACCCTTCTCG
TCCAAAACCCCATTCCCTATTGACATTTCTACCCCTGCTATTCGCGGGCT
TAGAAGTGACAGTCAAAAACCCAACCCTAATAACACAATGAAAATTGTGA
AAGAGTCGAATCCAATGTCAGACACAGTTTTACTTACCTCCCTACTTGCC
AATAGAGTGGACATTGCTTCCCTCCCAAAATTTGGTGCCCAATCAGATGA
AGACATAGTTGAGTTTTTGACCAAACTTGATTTGTCATTGTCATTTTACC
AATTAAACGATCAGCAGAAAGCAAGAGTAATACCTCTATTATTAAAGAAT
AGAGCGTACACGTTCTTTTTGACCCTAACTAATAACTCGAAAGAAGACTA
TAAGAAGTTATCTGATTGTCTTCGAAAAGAATTTGACGCTCCAGAATTGA
AATATCGGAAACGCCAAGAGCTACACGGCATTCAACAAANNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNGAACCTTTTAATCA
CCTTAAAATGACCTTCCTCTATGTTTTCCTGTTCAGCCTTCCTTATGaca
atttttatgattttgttattttgaaatatgaaagttAACCCCATTAACCC
CCACTAGGATTATATAATCAAGtaattaagttttatttttaggagTAGGG
ACCTAGTATATATAGaggtcaatttttcttttataaggagGTTAGTGAAG
TCAAATATTAGAGCTTCAACGATTAATTTCATAATGTAAGTGTAACTTTT
CTTTTGTAACTTTAGGAGCTGGTTATGTCaaagattatttttataggGAA
CTGACTTTGTCTAAGTTCATTCTGTACTCGTCTccccttttgttttgttt
actcTATCTGTTCATGAAATTAAGTAAGTTCAGATGGNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNCcttgagtttgaatttcttaa
aataatgttttcaaGATTATTTCGACCAATTTATCTAAAACCCCTTTTCG
GATTTTCTCTGTTCTGATGCAAATTAGATTTTATAAAGGTAGGACAGGTA
GGGCCTCGAcacactcaaaacaaaaattccattttcaaaTAAGAGAAATA
ATTTTGAGTTTGTACATGACAGAAGTTTAAATCACACGAGATTCAAATTA
GAATTATCCTGAACAAGTTTGGTACCAATAATCATCGATCTCAACAACTT
TTTATAGGGCATCACAAGCCAGGAAGATTATTGAAGAAAAACAAGATGAG
ATAGTGAGCTTGcgtaaagaaaatgaagattgcaGGAAtaggtaaaaata
aaaacttctccATTTTCATGCATTGACTTTCATTGATTTCTTCAGTTGTC
GTCTAGaacttacattttattttttaaccattttttagGATCAGTTCTAT
GATGATGTCTCAAGAGGTTGGCACaacatcttcaaaaaatttattgGACA
TTAACCGATTATTCAGATTACTCTATGTCAACGAGTACAAGTTTCTGTGA
CCAGAAACACAAAAAAGGAGTTCCTTTTGGAGATGatcttaaaatttgaa
atttttctgtaTAGACTTTTTACATGAAAAAGTCTAGCTAAAATGTCAAT
GTAGTGAATTTATGTTTATGCAggtatattttttgactttatatttttta
ctaaaatatataactactagccggtacccggcgtcgcacgccggttaagc
tgtagctgaacgcactaaaagtcctttggatatTAGTATATAATTATAAT
GTTTAATAAGCATATTCAGGGTTCGATTTATAAATTTTAAGGAGCTTTGC
TGTTTTTCAAGTGAAGCAAGCTTAAAAAAATGGAGCTCAGGCATattttt
ttcactgtttgcgaagtatttttagtattttgcgatGTAGTTTGGAAGAA
AATGTGACAGTATCTTCAATGCACCAAATTATCTTTCTCTTcctattttt
tgttgttgtcgATGTTACGTGTTGGTTTATATTCAAAAGCATTGTTATAA
CCGGACCTTTGTTGCGCTTTTGGTAATGCAGCGTTGCTCGGTGGAATATC
TTTTCACTCGATGAAAGATTGGATAAGTGTGTCTGAATTGAAAGTGGGAT
CTGCTTAATGATGTTGGGAGGGTTGTTTGACTGCACGTGAACGTAATTGG
TTTCGTTATTTGGCTTGTGGTACGGTCGATATGTACTAATTGCTATTGTC
AAACGTTACATCAAGGTAGTAATTCACTGTCGTCATGTTACATTGTATGA
CAATGTCTAGAATAATCGAAGGCATAAAGCAACCCACGAGCTCGCACACC
TTGGCATAGCCCTATGCACATTTACGTTAAGGGATGGAACCTTGTGCGGC
CGTTATGGGGAGTGCCTTAGGTACCCCGAGTCTTAAGCTTAAGAATCGTG
AATTCCCCTCTAGctctttatgtttttatttgaaaattgtgTAAAGAGAA
CTTTCACANTAAGCTTAAGAATCGTGAATTTCCCTCTAGCTCttctgttt
ttatttcaaaattatgtAAAGAGAACTTTCACAAGTCgtcaaaatgaaat
attttccgACTGGCCTCTAACATCGAGGGTCGGCTGAtggcaaaccaaca
tttttaagtccagcctaatGAAAAATTTTCTACCTTTATTATTCACTTTG
CAAGTGAATGTGCCTTCACACAGCCCATGTAAGGGGAATAGGGTTGACAG
AAACTCAATAAGCCTGTTTATAACTGGGCTAGGTATTGATTCCATAATAC
GCCATGTCCTTGTTCTCTAGTGGTTCACGCTGAATTAACGCACTTAATTC
AAAAACTGTGTGTCAATGTCTGGTAAGCTGGCAGGCAGTAAAACTAAAGC
ATAAGACGGTTCTAATCTTCTAACGAGAAGACTCCTAATATGTAATGTAT
CGCTTTTTTAGTTATTTTATATGATTTGTAAAAATACcatatttttatgt
aatttgtACACGTTCACACACATCAATAAattaaaatactattttttcac
taattttatttattattatttgttttgtttatttatttcaatttattttt
aagtaagtaagtaagtctgcgactgcAGTGGGAGGCTACCCGAAGGTTCC
Tcattcgatagctatctacccgaaggtaggggagggcgccactctttctc
cctggattactCCCCTTACCTTTGATCCTTGTCTTAATTGCtgaacatca
agcagagaggcatcgagTACCATTTTGAagatctttggtatgacccgact
gggggttgaacccacaaccttgcgcaccatagctggatgctctaccacta
caCTATGGTCGCTAGTGTAGGGATATAAATGCTGTTTACCCatttattat
tactattatttatGAAGCCAAGATATTCCTGTCACGGTTGCCATATATTG
TCATTCAGTTTTAGGAATCTCTCTAATCACAGTTTTTGCTTTAGAAAGAA
GTCATTATCCTATTGCATGCAGCTACTGAGTATGTTTTCACTCAATGTAT
CAAAATGTTGAtccattaaaccttttgtttaatttctctttttagataga
aaaaaaatatgaaaaattatgAATGAAAACCTCTAGTTGTAAAAGCTGAA
AGTACGATTTATTTTGGTTTCAAATCTTCAAATTGGGTTAAAAAGTGTAA
GTGTTTATCTCATTTTTTTCTGAGATATTTTTCCTTGTATGCTTAAAAAC
ATGATTAAGTGGTTACaatacaaaagtttttttttttgactttctaCCAT
ACTTCCATGAAAGCTAAATTTAAAGGGGGGTGCAACATTTGAAATGCTTA
ACATATTCAGAGCCTGAACCattcatgtttttaaaaacaccttGCTTACC
TTGTTTGCAGAAAACACTTTCAAGCATGAAAGgttcaattttaaaaacac
cATAAACACTAAATGTCCTGTCGAAGGCGACTGCTATAAAACAAGTCCCG
ACTGGCTGAAACGGTATCGAAAAGTCCCATTTCCCCgtttttttttccga
ttttctagCCCGATTTTTAACCcgatttttatctgattggttCAGTCAGG
AcactgcaagagcttcaaaatcgTCTTGAAAAATACCAGGAACACCAGGA
AAAAGACTGAATGGTTCACAAAATGGTGGTGTTTCTgggaaatggcattt
ttgcctGAGTTTCGTGGGGAAAATTGAGAGTTGATTTATGGAAATACCAG
GAACACAGGAAATGCTGGAAACACACCACCTCGATAGGTAAGGTGTTTCT
GGTAAAatgtttttgccaaaaacacccAGAAAACcatgaaaggttcagaa
aaGGTGTTTCAGGTAAaagtgttttcagtgttttcgggacttttttgaca
tgaaaggttcaggctctCAAACCCATGTGCCATATAACATTATGAGCATA
TATTATTTTATAGTATTGGGTTATGATGAACCAAGCAGCTGCCTTTCTCA
AATCAAACTTATATACCAACCCTACAAATTTCATTGATGTTGAAAAATAT
GTCAGTCTTCTTTTGGGTTTTGGGGAAACCCACTTGGAACATCTACTTGC
ATACTTACAACGCTACAATAAATCTATGGGACAAATAAAATCCATTGATG
TATTCATCCGAAAATTGGATCGTTTGGTTTGCACTTTTAACTATAAATTC
CGTACAGCACTTGATATCGATGGACTTTCAATTATTGTGTCTTATTTCGA
GGATGTTCTATATTATGTTGGCGAAATACTTGTTGCTGCTAAAAGAAAGC
ATGAGTTTGAAAAAGATTTGGAGTTTTGCAACGAGGCATTGCAATTGTTC
GCAAAAGTAGTTGGCAggtatagaattttttttcaactacTGTTAGAAAA
TACCTTAATGCCCTTAATTTTTGTGCGCCTTTTATTTTCGAgccctttaa
ttttcgcgcctttaattttcgcgcacccTTTAAAAATTACCTTTTGCGCA
CccctattattatcaattttcgCACATCCTAAAGTTTGTTTctctttaca
tatttttttctggCCATTTTCCAGTCAAATCCTCATGAAAAAGTctccaa
aaggcggacactctaattagcggacactaatcTGTTCCAACCTATTTTCT
TCTTTCTATACTCTTATTTTTGGTGAGGGGCGAGAGCAAAGAGAAGAGGC
TATCCTTAGAAAAGCTATAAGTGActtaaaattctttatttgctaaTTCG
CCCACATTTGAATTTTCGCGCAGCCTATTGCGCAAAAATAGGCCTTTTCG
CACACCCTTTAATTTCCGCGCAGTGGTAGTGCGCGAAAATTAAGGGCATT
CAGGTATCAAGAAATTGAATTATGactaaaataatgttttttgcCTCTGT
GAGGGAAACAATTGTACAATTCACGAATCTTTTTGTGCTGGaaagtcaaa
aacaaaattttcctgATACAGCGCCcaattcataaacacaatcacgcaac
tttgttgtcattcccagtccttttagacgagcGCGGTCCTTATGATTTTG
AGATAGCATATTCgtaaattgtttttgttttcaaccatccctttagagct
tcagcgtggtgggtagaaaacaatcacaatctgatctcaggacCTCATCC
TCACCCTCATTATTCTGCAAGCATAACAAATATTTTCTAACGCTTTTTTT
ACTTTACAGATATTCTTCTGATTCGAAGAATGAGATTCATTTTCAAATTG
GGAATTCCAAGAAGACAAGAGGGTTTGAAATAGGGGAAATGACACTTTAC
ATGTACTATCTTCTTGATGTTGGGTCAGCCGATATGCAGTATGTAAAATA
TGCCATTGAGAGAAAAGGATATGATGACCTATTTTATAAAGAAGGAAAAG
AATGTAGACAGGCAATGGAAAAACTAAAGGGATTTATATCCGCtgatgaa
attaaaaataatttcttgataCAAATCAATATGAATTTCAAATTCATGCT
GAATCAAGCAGCTCAGTCCTACTCTACAAATGATTTGTCATTCATAGCAA
AGATACTTCATTGGTCAAAACAATTGCTTTCTTTATTGAAGGATGTTCAC
AAAGACAAATTGAGGTACAGATATGTATTAATGTATTAATTCAATTCATT
GCAATGTGTCTTGAGCATTGAGTTCAAAGCCCATCTTGGATGTGAAATTA
GGCCACTTATTTCtcattgaaaatgtttgacccGCTTGGTTTCGGCCAAA
CTCTGAATTGAGAGAAAAATCCATTGCATCACCCCAAAATGTGGCATAAA
TCTctaagtttcatttttctttgctttggaattgttgaagattcctctct
ctcccttttgtatttaaaatcaatggtcctgaacctaaCAGAACAGAGTT
ATTCTTCCAAAAATTATTCTTGTTATCAATAATCATAAAGATATAAAgca
ttttttattgaattttcatCTACTGTTTTTCACATGTCCCTGAGCAGAAT
TAAACATTTCTATTCCAAGAGGCGTAAAAATTCATCTAACATCCTTAAAT
TCtgttttaacaattattttgaatttgtcttTCAGGAAATTGGAGAATAG
GAAAGAACCAGAGAAGAAGAAGCAGCCAGAACAGGAACAAAAGCTGGAAA
CTACTACAGCACAAGATATCAAANAGAAGAAGAAGCAGCCAGAACAGGAA
CAAAAGTTGGAAACTGCTACAGCACAAGATATCAAGAACAGTGTTCGTAC
AGTGACCATGGAGAACAGTTCAAAAGATTTAATCGAAACATTAAGAGGGA
AACATGAGCAACTACAGTCTGAATTGAATCGTGAGCGCAAAAAGTTAGTA
GATAACATCTATAAAAAATCCCAAATAAATCAATAATTTGCTGTGTGTAT
ATCTTTTTTGGAAGTGATCTCTGATTTAGGTTAGGGCTTATTCCCACTAG
GAAAGGAGTGTTTCTTGTCTTGTCTTATATCTTTTAAGAGAACTGTTTTT
TGAAAAGGTTCAAATCTTCCTGATTTTGACATATATATTTAAGTTACTGA
ATAAAACATAAAATGccaaagattttttgaagcaaaaatttaagaaataa
aactattttttattgttttcaggAATTGTGATCTTCATGAAGCTAATCGC
ATTGCTGAAACCGAGTAAGAGGGGTGACCTCAACCTCCATAAAAAAAGAG
AATGTTTATActtaaaacctaaaaaatatGTATTACATGTCTTTTTGATC
AAAAATCGTGAtgctaatttttatttattgaatatttttgtttaacactc
aaaacaaaaattccattttcaaataagaaaaagaattttgagTTTGTACA
TGACAGAAGTTTAAATCACACGAGATTCAAATTAGAATTATCCTGAACAA
GTTTGGTACCAATAATCATCGATCTCAACAACTTTTTATAGGGCATCACA
AGCCAGGAAGATTATTGAAGAAAAACAAGATGAGATAGTGAGCTTGcgta
aagaaaatgaagattgtaGGAAtaggtaaaaataaaaacttcttcatttt
catgcATTGACTGATTACTCTATTAGACGATTTCTTCAGTTGTCGTCTAG
aacttacattttatttttaaccattttttagGATCAGTTCTATGATGATG
TCTCAAGAGGTTGGCACAACATCTTCACAAAATTTGTTGGACATTAACCG
CCCAAGTATCGTCAAAGATAAATTCAGATTACTCTACGTCAACGAGTACA
ATGATGTTTTGAGCGCATGGGATCAATTGTCTGAAAAAGAATGTTCTGAT
TATCTCCTGGAGATTTTGTTTGTAAGGATCGGGTTCTAATTTTTTGTAGC
TTTGAAAAGTGAATACTACTAAGTACAAATAATAATACCATTTTATGTGG
CatatatttttgagtttttaggtATTCAATGACAATTGTTGAATTAGATT
TGTTTAATGTTTCATTTTAGGATGCAAACGATTTATGCAACCAATATGCT
AATAAATTCACCGGAGATGTCACAAACTCGCTTGAGTGTATTTTCAAgaa
ggttgaaatttctttgtatttataAGTTTGATTATTTGACCCATCTTTGT
TCGGTGAAAGTGATATTATGTGCAACTAAATTgcttattattttatttac
cTGACAAAACCTTTTCAAGATTTACTACAATTGTTGCTGCCGATGTAGGA
ATACATCTATGATAGACCGACTGCTGTTGAAGGCTGTCCAGGCTGTCGTA
TCTTGTATACATCCTTTAGCTCATTGGCAAACACAGCTATTTTAACATCT
TAACAAGtggactttttttaaaagaacaaactagATTGCGCCTTCCAAAA
AACAGCAGacagaacaacagcaacaaaatttaatttggcaattCAATTTG
CTTTTAGATGCCATTTTCTGCTAATAATACCTACAAAGGGAACAAACACA
TTTTGGAATTTATTCACGAAAATTTGAAGAACATGCCTCATGAAAGTATT
CAAGAAGAATTCTGCAAC
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_003776XLOC_003776Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00006748-exon-sc0000070-1491911889:322777..322808TCONS_00006748-exon-sc0000070-1491911889:322777..322808Clytia hemisphaericaexon
TCONS_00006748-exon-sc0000070-1510915933:322777..322808TCONS_00006748-exon-sc0000070-1510915933:322777..322808Clytia hemisphaericaexon
TCONS_00006748-exon-sc0000070-1575043694:322777..322808TCONS_00006748-exon-sc0000070-1575043694:322777..322808Clytia hemisphaericaexon
TCONS_00006748-exon-sc0000070-1491911889:327946..327965TCONS_00006748-exon-sc0000070-1491911889:327946..327965Clytia hemisphaericaexon
TCONS_00006748-exon-sc0000070-1510915933:327946..327965TCONS_00006748-exon-sc0000070-1510915933:327946..327965Clytia hemisphaericaexon
TCONS_00006748-exon-sc0000070-1575043694:327946..327965TCONS_00006748-exon-sc0000070-1575043694:327946..327965Clytia hemisphaericaexon
TCONS_00006748-exon-sc0000070-1491911889:328441..328635TCONS_00006748-exon-sc0000070-1491911889:328441..328635Clytia hemisphaericaexon
TCONS_00006748-exon-sc0000070-1510915933:328441..328635TCONS_00006748-exon-sc0000070-1510915933:328441..328635Clytia hemisphaericaexon
TCONS_00006748-exon-sc0000070-1575043694:328441..328635TCONS_00006748-exon-sc0000070-1575043694:328441..328635Clytia hemisphaericaexon
TCONS_00006748-exon-sc0000070-1491911889:328919..328960TCONS_00006748-exon-sc0000070-1491911889:328919..328960Clytia hemisphaericaexon
TCONS_00006748-exon-sc0000070-1510915933:328919..328960TCONS_00006748-exon-sc0000070-1510915933:328919..328960Clytia hemisphaericaexon
TCONS_00006748-exon-sc0000070-1575043694:328919..328960TCONS_00006748-exon-sc0000070-1575043694:328919..328960Clytia hemisphaericaexon
TCONS_00006748-exon-sc0000070-1491911889:332984..333067TCONS_00006748-exon-sc0000070-1491911889:332984..333067Clytia hemisphaericaexon
TCONS_00006748-exon-sc0000070-1510915933:332984..333067TCONS_00006748-exon-sc0000070-1510915933:332984..333067Clytia hemisphaericaexon
TCONS_00006748-exon-sc0000070-1575043694:332984..333067TCONS_00006748-exon-sc0000070-1575043694:332984..333067Clytia hemisphaericaexon
TCONS_00006748-exon-sc0000070-1491911889:339358..339547TCONS_00006748-exon-sc0000070-1491911889:339358..339547Clytia hemisphaericaexon
TCONS_00006748-exon-sc0000070-1510915933:339358..339547TCONS_00006748-exon-sc0000070-1510915933:339358..339547Clytia hemisphaericaexon
TCONS_00006748-exon-sc0000070-1575043694:339358..339547TCONS_00006748-exon-sc0000070-1575043694:339358..339547Clytia hemisphaericaexon
TCONS_00006748-exon-sc0000070-1491911889:339697..339777TCONS_00006748-exon-sc0000070-1491911889:339697..339777Clytia hemisphaericaexon
TCONS_00006748-exon-sc0000070-1510915933:339697..339777TCONS_00006748-exon-sc0000070-1510915933:339697..339777Clytia hemisphaericaexon
TCONS_00006748-exon-sc0000070-1575043694:339697..339777TCONS_00006748-exon-sc0000070-1575043694:339697..339777Clytia hemisphaericaexon
TCONS_00006748-exon-sc0000070-1491911889:340134..340244TCONS_00006748-exon-sc0000070-1491911889:340134..340244Clytia hemisphaericaexon
TCONS_00006748-exon-sc0000070-1510915933:340134..340244TCONS_00006748-exon-sc0000070-1510915933:340134..340244Clytia hemisphaericaexon
TCONS_00006748-exon-sc0000070-1575043694:340134..340244TCONS_00006748-exon-sc0000070-1575043694:340134..340244Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000070supercontigsc0000070:322777..340244 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
Sort Descending | Sort Ascending | Only Non-Zero Values | Tile/Chart | Reset | Show/Hide Values

Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
8.7704	11.0123	2.25516	2.27057	0	1.09479e-09	0.463276	1.32048e-06	2.15085	3.17186	0.00123668	0.780317	7.17383	0	10.0574	9.54741	5.79126	8.56724	9.66797	15.1548	5.40222	5.02201	6.32826	8.85564	0	0	8.00385	6.52933	5.90549	5.45078
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00006748 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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