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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00006735 ID=TCONS_00006735|Name=TCONS_00006735|organism=Clytia hemisphaerica|type=transcript|length=1676bp
AGGTACTAATAAAAATGCTGCTACTAAGAAAAACATTAACAAATACCAAG
AAAATCGCCACTAACCAGTGTCAATATAACCAACATTTGAAAACATGGTT
ATTGAAAAGACAGATCCATTATGATGTGGTGATTGTTGGTGGTGGAGTGA
TGGGTTCATCTTCAGCATTCTTTCTCAAACATAAAGCACCTTCATTAAAC
GTTGCAGTTGTGGAAGGCGATCCCAAGTATTCAAAATCGTCCAGTTCTTT
ATCAGTGGGAGGCGTTCGCGAGCAATTCTCAACACCAGAGAATATACGTT
TGTCACAATGGAGCAGCCATTTCATGAAAAACATTGACCAATATTTATCC
ATCGATGGTGAAGAACCTTGTATATCCTTTTTCAAATCTTCCTACTTATT
CTTGGCTACAGAATCTGGTGTTGATATATTGAAATCCAATGCAGAAATTC
AAAAAAATTGTGGTGTGGACATCAAATCAGTAGGGTCAGACGAAATTCAT
AAATATTTTGAATGGGTTAATACCGATGGTATCGCTGCTGCTAATATTTA
CTCTGGAGAAAAGGAGGGCAGTTTTGATGGTTGGTGTTTATTGCAAGCTT
TCAAGAAGAAAGCAGAACAAATCGGTGTACATTATATCAAAGGAGATTGC
CAAAAGATTGATGTTGGTACCACTGTCAAGGGCATTACTGTAGATTGCGA
TGGTCAAGCGATGAATATAGAATGCGATTCTCTGGTGAATGCAGCTGGTC
CTTGGGCTGGTGAACTCATGTCCAAAATTAACCTCCATTTACCTGTTGTG
CCAAGAAAACGATATGTTTTTGCTTTCGATTGTCCAAAAGGTCCTGGAAG
GGCAGCTCCGCTTACTGTGGACCCGACCGGCGTTTATTTTAAACCGGACG
GACAGACTGGAACAAGATATCTTTGTGGATGCAGCCCAGAAGAGGATGAG
GAACCCGACATTTCCAACTTGGATGTCGATTACGAttactttgaaagttt
tttatggcCCATCCTTGCTGAACGATATCGTGGTATGGAAGAGTTGAAGG
TTTGTCATTCATGGGCAGGTTATTATGATTATAATACGTTGGATCAGAAC
TGTGTGATTGGTCCACACCCACACATCCAGAATCTGTATTTCATAAATGG
TTTCAGTGGACATGGTATACAACAATCTCCAGCGGCTGGAAATGCGATCA
GTGAATTAATATTGGAAGGGAAATATGTTGATATTGACTTAACTCGATTT
CAATATGAAAGGATTTTAAATGATAGGCCATTACCGGAGATAAATGTTGT
ATGAGATATGGTGTATGGGTTTTttaaagtggggggggggcatcCAATGG
TCTCTAAAATCTTGAAATCCCGTTACATTTTCGGAAGAATCCCGTAATCC
CGTTGATATTTTAACCAAATACCGCTTTTGTTTCGGCGAAATGTTTGTAT
TTTTTAGCAGTTTTGGGGTGTTCTTACACTTTGCTTTTTTGTACTTCTGG
CTAAAAATTACCATTTTTGAGAATGGAGTTTTGTATCTCAATATAAATAT
GTGCCCGGGTTTATAAGCTTGCCACCAATCTGGAATAATTATCTAGAATG
TCATTTTTCGGTTTTGAGTAACTTAAGAATATTTATAGGCAGATATTTAt
ataattgaaattattttgtattttat Run BLAST on NCBI protein sequence of TCONS_00006735-protein >TCONS_00006735-protein ID=TCONS_00006735-protein|Name=TCONS_00006735-protein|organism=Clytia hemisphaerica|type=polypeptide|length=433bp
VLIKMLLLRKTLTNTKKIATNQCQYNQHLKTWLLKRQIHYDVVIVGGGVM
GSSSAFFLKHKAPSLNVAVVEGDPKYSKSSSSLSVGGVREQFSTPENIRL
SQWSSHFMKNIDQYLSIDGEEPCISFFKSSYLFLATESGVDILKSNAEIQ
KNCGVDIKSVGSDEIHKYFEWVNTDGIAAANIYSGEKEGSFDGWCLLQAF
KKKAEQIGVHYIKGDCQKIDVGTTVKGITVDCDGQAMNIECDSLVNAAGP
WAGELMSKINLHLPVVPRKRYVFAFDCPKGPGRAAPLTVDPTGVYFKPDG
QTGTRYLCGCSPEEDEEPDISNLDVDYDYFESFLWPILAERYRGMEELKV
CHSWAGYYDYNTLDQNCVIGPHPHIQNLYFINGFSGHGIQQSPAAGNAIS
ELILEGKYVDIDLTRFQYERILNDRPLPEINVV Run BLAST on NCBI transcript from alignment at sc0000070:254462..260378+ Legend: exonfive_prime_UTRCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00006735 ID=TCONS_00006735|Name=TCONS_00006735|organism=Clytia hemisphaerica|type=transcript|length=5917bp|location=Sequence derived from alignment at sc0000070:254462..260378+ (Clytia hemisphaerica)
AGGTACTAATAAAAATGCTGCTACTAAGAAAAACATTAACAAATACCAAG
AAAATCGCCACTAACCAGTGTCAATATAACCAACATTTGAAAACATGGTT
ATTGAAAAGACAGATCCATTATGATGTGGTGATTGTTGGTGGTGGAGTGA
TGGGTTCATCTTCAGCATTCTTTCTCAAACATAAAGCACCTTCATTAAAC
GTTGCAGTTGTGGAAGGCGATCCCAAGGTATGACGGTGAAAACGCTTTTG
GGGTTCTCGTACCAAAAGCCATTTGCATCGCTTTTTAGTGCTATCAGAAT
GGAAAAGTAAACTAAGAGACTTTGGTCGAGTTCCTCGCTTTTATTGTAAA
AGCCTTATTCCAAAATTACGTTCTTATCCTTCTCCGTGAACTCTTTTAAT
GTTTCTGTTTTATATTCTTTATAGTATTTGAAAGCGTCCAGTTCTTTAAT
GGTATGCGTTGTTTGCAAGCCAAATGGTCGTGGGTCCCATGAATTAATTG
AACTAAAACTGAAGaagtactagtaatctcatggttacaagggaaattcg
ggataaatttctcGAGTGgaacgagggaaatttaaaacatttcgaaattt
gaccgagggttTAATTTActcagaatttcacgaaaacgtcaatcgaattt
caatcaaccatgagattctCAGCTTTATTTATCTTTCTTTCTAGTATTCA
AAATCGTCCAGTTCTTTATCAGTGGGAGGCGTTCGCGAGCAATTCTCAAC
ACCAGAGAATATACGTTTGTCACAATGGAGCAGCCATTTCATGAAAAACA
TTGACCAATATTTATCCATCGATGGTGAAGAACCTTGTATATCCTTTTTC
AAATCTTCCTACTTATTCTTGGCTACAGAATCTGGTGTTGATATATTGAA
ATCCAATGCAGAAATTCAAAAgtatgaaattgttttgtttttactgACTT
CTTAGTCGCAAAATATCTCCATGAGCTCTTTTTTGGGTCTTATTGAGGAC
TAGAGAAATAGCACTTGATTTCTGTATTTTCCAAAAGCCGACCAATCAAA
TAGAAGGATTAAGGATAAGTTAGGAAATGATTGACGTTCTATCCTATCTT
CTAGGCAAGGAAACTTTAGAATCGATTTTGACTGCAGGCGGAAAGTTTTT
CTCAGAATTCCAGTGATTTCAAATATGATCTTTTGTCTCTTTAGAAATTG
TGGTGTGGACATCAAATCAGTAGGGTCAGACGAAATTCATAAATATTTTG
AATGGGTTAATACCGATGGTATCGCTGCTGCTAATATTTGTAAGCCAATC
TTTTCACAGTAAATCACCTCTGTATCAGTGACTGACCTAGTTGCACTTCC
GCCCACTGGaatatttttagaattattttgtaCCCGAGGAAAAGAACACC
CTTTCAGCCCCACTTGAATATTGATTTTGTTCTCAAGTTCAAAGTTCAAC
GAGGAAAACTACACTGCACACTTTTGATAGACATTTTCATCCCCACATTT
TAAATGCGTTCTTTTTGGGTTCcgtaagtttttctttttcttaactTAAC
TTTAACTCCTACTGACCTTGCTAAATTACTCTTGTCTCCTGAATAgacgg
ggggtccgaataagcaggggggataggaaaatgttctaaattctaataag
cggggggggggNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNgtcatcaaaaatacggcgcatattttaag
gcttcaatttttcttgcctgagaaaggttagagattgacctctagccctt
cgggcttgaaactcaatggggggggatggaataagaggggggtaatttga
agacagaatttttttaattgatataaatttcagcaacaaaaaaagaaact
tttgcaaatgaacacgtaaagtAAGAACCAATACTTGCAAAAAGGAAATA
TCtacactgaaaaaaaatattgaattattcgaatttaattagcagggggg
ggtcttaataagagcggggggggttggatttttttttttttaaaaagggg
gggggggggggattttttttttttaaaaagggggggggggggggattttt
tttttttaaaaagggggggggggggggattttttttttttaaaaattggg
ggggggggggtcttaataagagccgggggggatggatttttttcttttaa
caattagcggggggggggcgtcTCTTCGGGAGACAGGAGTATTACATTGG
ACACAGTAGAAGATAAGTTTCTATTCATCGGATAGACATGCGTCGCAAAG
CATGTCTTTAAATTGCTAATATGGTACAGGTAATGATCGGTGATTCTTGC
TTGTTTAATgcgtttttcattttccatagACTCTGGAGAAAAGGAGGGCA
GTTTTGATGGTTGGTGTTTATTGCAAGCTTTCAAGAAGAAAGCAGAACAA
ATCGGTGTACATTATATCAAAGGAGATTGCCAAAAGATTGATGTTGGTAC
CACTGTCAAGGGCATTACTGTAAATACATTCGTACATAATTATATGAAAT
TACAGTTTTTACGCCGACTTTTAAAGACTAAATTGCAGACCTCTTAAACA
ACTGCAGAAAGTACAGGCTCTTAGAATCACGAAATGGTCAGAGGACGTAG
TTTTAATCATTGTGCCTGAAAATAATTAGAGCCATCGGTTCGTTTTTGAA
TCaatctaaccaatagaatggatTCAgttgtagactggagtcgttcatGA
TCCGTGTAAGACAGTAATATGCGTGTCATATTAATAATATGGTTATggtt
acgggataatatcagttaTGGTTACGAGATAATATCAGTTATTGTTACTT
ATTATTGGGCTGTTCTATATAAAACCATACAGGGGAGTGGACGGACCTTT
TAAAATGTGTGGATAACCCCTGGAAATGGCAAAGTTTGCAGAAATActct
tggaaaattttttttcataccttaaagcgagggtggacgaactaaaatca
gtcttttacaccctggaaattttagaataactttttacagcCCCCCCcct
tagaaaaatgaaaaaacgcGCCCTGTAATTTTTTCTCAGATAaacctctg
gaaatgttcgtccaccccctgtatggatgtCAGAACCACCACCCCCTATG
TCTGAATTAGCCCTCAGACTACTTCATTTGGTTTTGGTACGGAACCCAAT
CTTAATCGTGATCTTTTCTAGAATATCTCTTGGTTTATCAGGTAGATTGC
GATGGTCAAGCGATGAATATAGAATGCGATTCTCTGGTGAATGCAGCTGG
TCCTTGGGCTGGTGAACTCATGTCCAAAATTAACCTCCATTTACCTGTTG
TGCCAAGAAAACGATATGTTTTTGCTTTCGATTGTCCAAAAGGTCCTGGA
AGGGCAGCTCCGCTTACTGTGGACCCGACCGGCGTTTATTTTAAACCGGA
CGGACAGACTGGAACAAGATATCTTTGTGGATGCAGCCCAGAAGAGGTAT
GCAATGGTTATTTTTTCATAGAATGATTAAATAGGATGATTTATGCTTTA
ATCGATCGCTTGTAATACTCAGCACCGCAGCGAATCTtcaaatgggctat
tccagttatattctgtaccccctatgtcgAGGAAgagtgacgtccagggt
ggttttttgaatgataaaatccagggtggtcagtaaaatcgggttgaaaa
tccagggtggtccaaagaaATAGGAGGAAAAAGGGAgttctgaaaaattg
aaaaatccaggggggtcacatttaaaaaaaaagaacttctcaacataggg
ggtacaaatttttttttggaatagcccaatggAGCAAAATCAGAAATCTG
TAATTTACACAGTCATAAATAAGCTTTTGGTGAGATTTTCGGCGATACGT
CCTAGAATAGTTTTGCATAAGTACTTAATTTCACGAATTTGAAGATTTAA
GTGTATTTATatacaggttttttttttaagaaactgattttaccaagcag
cctcgatgtttcttaagaaatcatgtttctaaactttttaacaTAATCAA
TCTCAtgaaaggctggattggaaggttcttaaaaaaaccgaattaaaaaa
tattattttctcattctcagcctcagcatgtttattagatgtttcttagt
ttttaggcattatgagtctcatgtttcttaaaagtgtgtttcttaaaaaa
aacgtgtattcgtgCAGAAGTCTGATAACGATAGTttgtaggctgctggc
atcctcTAACGAATTCGTGCTTCTTATAgatactacctgcggttttgtag
aggtctgcgattcagtcTAGATAGTATGTTAACCAGCGTCAACCTGCACT
ACAAAGAAATGATTACTACCGATTTAAGTAAACTCTGTTTACTTTTTTCG
CAGGATGAGGAACCCGACATTTCCAACTTGGATGTCGATTACGAttactt
tgaaagttttttatggcCCATCCTTGCTGAACGATATCGTGGTATGGAAG
AGTTGAAGGTATGAATagattgcttataaaaatggtTTGGTCTTATCTTT
CCAAATATCAAAGATTATACTTAACTCGAacctcaaatgtctccttaact
cgaaaaagttttttcttcctttcagtTGACAAAAATGTGTTGTAAACGTC
TAAATCGAAATTCCCAtagctcgaacaaatttgtgttccccgtgcgtgtt
cgagttatggagactccataGATCTGTAATAGTTTATGTCACATGTATGG
AGAAAGTGGCCTTTCGCATTTCAGAGGGAGCTGATCTAAAGAATCCTTCC
TTTACAAAAAATAGACAGAAATAGCGACTTCGGAAAATTTTCCCCATCTA
CAACCCCGACCCGGTTAGTTCCTCCACCTCAAAGTTTtgattcctctttg
tttatttcaaagataaactacatatggttaaaataacgacaaattacgca
tgcatgttataatgcaggattctttacaGGAACAGACTGTTATGTATCAT
TGAATTGAGGGGAAAATGAATTCCTTTAGAGTTTTTAGAATTATAGCGAG
CTAGACTGCCCATCCTATTAAAGTTTCTACTAATTCGTTGAAAAGACCAT
TTCAACACCACTAAtgttgaatttaaacaataaagctagtgGTAAACACC
CAGGCTATTTTGAGTGTTCCTGTATAAATCATCACGTCACAAAATCGTGG
ATCAAAGGTTTATATAATTCTTGTGATTTCATCTTCATAGGTTTGTCATT
CATGGGCAGGTTATTATGATTATAATACGTTGGATCAGAACTGTGTGATT
GGTCCACACCCACACATCCAGAATCTGTATTTCATAAATGGTTTCAGTGG
ACATGGTATACAACAATCTCCAGCGGCTGGAAATGCGATCAGTGAATTAA
TATTGGAAGGGAAATATGTTGATATTGACTTAACTCGATTTCAATATGAA
AGGATTTTAAATGATAGGCCATTACCGGAGATAAATGTTGTATGAGATAT
GGTGTATGGGTTTTttaaagtggggggggggcatcCAATGGTCTCTAAAA
TCTTGAAATCCCGTTACATTTTCGGAAGAATCCCGTAATCCCGTTGATAT
TTTAACCAAATACCGCTTTTGTTTCGGCGAAATGTTTGTATTTTTTAGCA
GTTTTGGGGTGTTCTTACACTTTGCTTTTTTGTACTTCTGGCTAAAAATT
ACCATTTTTGAGAATGGAGTTTTGTATCTCAATATAAATATGTGCCCGGG
TTTATAAGCTTGCCACCAATCTGGAATAATTATCTAGAATGTCATTTTTC
GGTTTTGAGTAACTTAAGAATATTTATAGGCAGATATTTAtataattgaa
attattttgtattttat Coding sequence (CDS) from alignment at sc0000070:254462..260378+ >TCONS_00006735 ID=TCONS_00006735|Name=TCONS_00006735|organism=Clytia hemisphaerica|type=CDS|length=9114bp|location=Sequence derived from alignment at sc0000070:254462..260378+ (Clytia hemisphaerica)
GTACTAATAAAAATGCTGCTACTAAGAAAAACATTAACAAATACCAAGAA
AATCGCCACTAACCAGTGTCAATATAACCAACATTTGAAAACATGGTTAT
TGAAAAGACAGATCCATTATGATGTGGTGATTGTTGGTGGTGGAGTGATG
GGTTCATCTTCAGCATTCTTTCTCAAACATAAAGCACCTTCATTAAACGT
TGCAGTTGTGGAAGGCGATCCCAAGTATTCAAAATCGTCCAGTTCTTTAT
CAGTGGGAGGCGTTCGCGAGCAATTCTCAACACCAGAGAATATACGTTTG
TCACAATGGAGCAGCCATTTCATGAAAAACATTGACCAATATTTATCCAT
CGATGGTGAAGAACCTTGTATATCCTTTTTCAAATCTTCCTACTTATTCT
TGGCTACAGAATCTGGTGTTGATATATTGAAATCCAATGCAGAAATTCAA
AAAAATTGTGGTGTGGACATCAAATCAGTAGGGTCAGACGAAATTCATAA
ATATTTTGAATGGGTTAATACCGATGGTATCGCTGCTGCTAATATTTACT
CTGGAGAAAAGGAGGGCAGTTTTGATGGTTGGTGTTTATTGCAAGCTTTC
AAGAAGAAAGCAGAACAAATCGGTGTACATTATATCAAAGGAGATTGCCA
AAAGATTGATGTTGGTACCACTGTCAAGGGCATTACTGTAGATTGCGATG
GTCAAGCGATGAATATAGAATGCGATTCTCTGGTGAATGCAGCTGGTCCT
TGGGCTGGTGAACTCATGTCCAAAATTAACCTCCATTTACCTGTTGTGCC
AAGAAAACGATATGTTTTTGCTTTCGATTGTCCAAAAGGTCCTGGAAGGG
CAGCTCCGCTTACTGTGGACCCGACCGGCGTTTATTTTAAACCGGACGGA
CAGACTGGAACAAGATATCTTTGTGGATGCAGCCCAGAAGAGGATGAGGA
ACCCGACATTTCCAACTTGGATGTCGATTACGAttactttgaaagttttt
tatggcCCATCCTTGCTGAACGATATCGTGGTATGGAAGAGTTGAAGGTT
TGTCATTCATGGGCAGGTTATTATGATTATAATACGTTGGATCAGAACTG
TGTGATTGGTCCACACCCACACATCCAGAATCTGTATTTCATAAATGGTT
TCAGTGGACATGGTATACAACAATCTCCAGCGGCTGGAAATGCGATCAGT
GAATTAATATTGGAAGGGAAATATGTTGATATTGACTTAACTCGATTTCA
ATATGAAAGGATTTTAAATGATAGGCCATTACCGGAGATAAATGTTGTAT
GAGTACTAATAAAAATGCTGCTACTAAGAAAAACATTAACAAATACCAAG
AAAATCGCCACTAACCAGTGTCAATATAACCAACATTTGAAAACATGGTT
ATTGAAAAGACAGATCCATTATGATGTGGTGATTGTTGGTGGTGGAGTGA
TGGGTTCATCTTCAGCATTCTTTCTCAAACATAAAGCACCTTCATTAAAC
GTTGCAGTTGTGGAAGGCGATCCCAAGTATTCAAAATCGTCCAGTTCTTT
ATCAGTGGGAGGCGTTCGCGAGCAATTCTCAACACCAGAGAATATACGTT
TGTCACAATGGAGCAGCCATTTCATGAAAAACATTGACCAATATTTATCC
ATCGATGGTGAAGAACCTTGTATATCCTTTTTCAAATCTTCCTACTTATT
CTTGGCTACAGAATCTGGTGTTGATATATTGAAATCCAATGCAGAAATTC
AAAAAAATTGTGGTGTGGACATCAAATCAGTAGGGTCAGACGAAATTCAT
AAATATTTTGAATGGGTTAATACCGATGGTATCGCTGCTGCTAATATTTA
CTCTGGAGAAAAGGAGGGCAGTTTTGATGGTTGGTGTTTATTGCAAGCTT
TCAAGAAGAAAGCAGAACAAATCGGTGTACATTATATCAAAGGAGATTGC
CAAAAGATTGATGTTGGTACCACTGTCAAGGGCATTACTGTAGATTGCGA
TGGTCAAGCGATGAATATAGAATGCGATTCTCTGGTGAATGCAGCTGGTC
CTTGGGCTGGTGAACTCATGTCCAAAATTAACCTCCATTTACCTGTTGTG
CCAAGAAAACGATATGTTTTTGCTTTCGATTGTCCAAAAGGTCCTGGAAG
GGCAGCTCCGCTTACTGTGGACCCGACCGGCGTTTATTTTAAACCGGACG
GACAGACTGGAACAAGATATCTTTGTGGATGCAGCCCAGAAGAGGATGAG
GAACCCGACATTTCCAACTTGGATGTCGATTACGAttactttgaaagttt
tttatggcCCATCCTTGCTGAACGATATCGTGGTATGGAAGAGTTGAAGG
TTTGTCATTCATGGGCAGGTTATTATGATTATAATACGTTGGATCAGAAC
TGTGTGATTGGTCCACACCCACACATCCAGAATCTGTATTTCATAAATGG
TTTCAGTGGACATGGTATACAACAATCTCCAGCGGCTGGAAATGCGATCA
GTGAATTAATATTGGAAGGGAAATATGTTGATATTGACTTAACTCGATTT
CAATATGAAAGGATTTTAAATGATAGGCCATTACCGGAGATAAATGTTGT
ATGAGTACTAATAAAAATGCTGCTACTAAGAAAAACATTAACAAATACCA
AGAAAATCGCCACTAACCAGTGTCAATATAACCAACATTTGAAAACATGG
TTATTGAAAAGACAGATCCATTATGATGTGGTGATTGTTGGTGGTGGAGT
GATGGGTTCATCTTCAGCATTCTTTCTCAAACATAAAGCACCTTCATTAA
ACGTTGCAGTTGTGGAAGGCGATCCCAAGTATTCAAAATCGTCCAGTTCT
TTATCAGTGGGAGGCGTTCGCGAGCAATTCTCAACACCAGAGAATATACG
TTTGTCACAATGGAGCAGCCATTTCATGAAAAACATTGACCAATATTTAT
CCATCGATGGTGAAGAACCTTGTATATCCTTTTTCAAATCTTCCTACTTA
TTCTTGGCTACAGAATCTGGTGTTGATATATTGAAATCCAATGCAGAAAT
TCAAAAAAATTGTGGTGTGGACATCAAATCAGTAGGGTCAGACGAAATTC
ATAAATATTTTGAATGGGTTAATACCGATGGTATCGCTGCTGCTAATATT
TACTCTGGAGAAAAGGAGGGCAGTTTTGATGGTTGGTGTTTATTGCAAGC
TTTCAAGAAGAAAGCAGAACAAATCGGTGTACATTATATCAAAGGAGATT
GCCAAAAGATTGATGTTGGTACCACTGTCAAGGGCATTACTGTAGATTGC
GATGGTCAAGCGATGAATATAGAATGCGATTCTCTGGTGAATGCAGCTGG
TCCTTGGGCTGGTGAACTCATGTCCAAAATTAACCTCCATTTACCTGTTG
TGCCAAGAAAACGATATGTTTTTGCTTTCGATTGTCCAAAAGGTCCTGGA
AGGGCAGCTCCGCTTACTGTGGACCCGACCGGCGTTTATTTTAAACCGGA
CGGACAGACTGGAACAAGATATCTTTGTGGATGCAGCCCAGAAGAGGATG
AGGAACCCGACATTTCCAACTTGGATGTCGATTACGAttactttgaaagt
tttttatggcCCATCCTTGCTGAACGATATCGTGGTATGGAAGAGTTGAA
GGTTTGTCATTCATGGGCAGGTTATTATGATTATAATACGTTGGATCAGA
ACTGTGTGATTGGTCCACACCCACACATCCAGAATCTGTATTTCATAAAT
GGTTTCAGTGGACATGGTATACAACAATCTCCAGCGGCTGGAAATGCGAT
CAGTGAATTAATATTGGAAGGGAAATATGTTGATATTGACTTAACTCGAT
TTCAATATGAAAGGATTTTAAATGATAGGCCATTACCGGAGATAAATGTT
GTATGAGTACTAATAAAAATGCTGCTACTAAGAAAAACATTAACAAATAC
CAAGAAAATCGCCACTAACCAGTGTCAATATAACCAACATTTGAAAACAT
GGTTATTGAAAAGACAGATCCATTATGATGTGGTGATTGTTGGTGGTGGA
GTGATGGGTTCATCTTCAGCATTCTTTCTCAAACATAAAGCACCTTCATT
AAACGTTGCAGTTGTGGAAGGCGATCCCAAGTATTCAAAATCGTCCAGTT
CTTTATCAGTGGGAGGCGTTCGCGAGCAATTCTCAACACCAGAGAATATA
CGTTTGTCACAATGGAGCAGCCATTTCATGAAAAACATTGACCAATATTT
ATCCATCGATGGTGAAGAACCTTGTATATCCTTTTTCAAATCTTCCTACT
TATTCTTGGCTACAGAATCTGGTGTTGATATATTGAAATCCAATGCAGAA
ATTCAAAAAAATTGTGGTGTGGACATCAAATCAGTAGGGTCAGACGAAAT
TCATAAATATTTTGAATGGGTTAATACCGATGGTATCGCTGCTGCTAATA
TTTACTCTGGAGAAAAGGAGGGCAGTTTTGATGGTTGGTGTTTATTGCAA
GCTTTCAAGAAGAAAGCAGAACAAATCGGTGTACATTATATCAAAGGAGA
TTGCCAAAAGATTGATGTTGGTACCACTGTCAAGGGCATTACTGTAGATT
GCGATGGTCAAGCGATGAATATAGAATGCGATTCTCTGGTGAATGCAGCT
GGTCCTTGGGCTGGTGAACTCATGTCCAAAATTAACCTCCATTTACCTGT
TGTGCCAAGAAAACGATATGTTTTTGCTTTCGATTGTCCAAAAGGTCCTG
GAAGGGCAGCTCCGCTTACTGTGGACCCGACCGGCGTTTATTTTAAACCG
GACGGACAGACTGGAACAAGATATCTTTGTGGATGCAGCCCAGAAGAGGA
TGAGGAACCCGACATTTCCAACTTGGATGTCGATTACGAttactttgaaa
gttttttatggcCCATCCTTGCTGAACGATATCGTGGTATGGAAGAGTTG
AAGGTTTGTCATTCATGGGCAGGTTATTATGATTATAATACGTTGGATCA
GAACTGTGTGATTGGTCCACACCCACACATCCAGAATCTGTATTTCATAA
ATGGTTTCAGTGGACATGGTATACAACAATCTCCAGCGGCTGGAAATGCG
ATCAGTGAATTAATATTGGAAGGGAAATATGTTGATATTGACTTAACTCG
ATTTCAATATGAAAGGATTTTAAATGATAGGCCATTACCGGAGATAAATG
TTGTATGAGTACTAATAAAAATGCTGCTACTAAGAAAAACATTAACAAAT
ACCAAGAAAATCGCCACTAACCAGTGTCAATATAACCAACATTTGAAAAC
ATGGTTATTGAAAAGACAGATCCATTATGATGTGGTGATTGTTGGTGGTG
GAGTGATGGGTTCATCTTCAGCATTCTTTCTCAAACATAAAGCACCTTCA
TTAAACGTTGCAGTTGTGGAAGGCGATCCCAAGTATTCAAAATCGTCCAG
TTCTTTATCAGTGGGAGGCGTTCGCGAGCAATTCTCAACACCAGAGAATA
TACGTTTGTCACAATGGAGCAGCCATTTCATGAAAAACATTGACCAATAT
TTATCCATCGATGGTGAAGAACCTTGTATATCCTTTTTCAAATCTTCCTA
CTTATTCTTGGCTACAGAATCTGGTGTTGATATATTGAAATCCAATGCAG
AAATTCAAAAAAATTGTGGTGTGGACATCAAATCAGTAGGGTCAGACGAA
ATTCATAAATATTTTGAATGGGTTAATACCGATGGTATCGCTGCTGCTAA
TATTTACTCTGGAGAAAAGGAGGGCAGTTTTGATGGTTGGTGTTTATTGC
AAGCTTTCAAGAAGAAAGCAGAACAAATCGGTGTACATTATATCAAAGGA
GATTGCCAAAAGATTGATGTTGGTACCACTGTCAAGGGCATTACTGTAGA
TTGCGATGGTCAAGCGATGAATATAGAATGCGATTCTCTGGTGAATGCAG
CTGGTCCTTGGGCTGGTGAACTCATGTCCAAAATTAACCTCCATTTACCT
GTTGTGCCAAGAAAACGATATGTTTTTGCTTTCGATTGTCCAAAAGGTCC
TGGAAGGGCAGCTCCGCTTACTGTGGACCCGACCGGCGTTTATTTTAAAC
CGGACGGACAGACTGGAACAAGATATCTTTGTGGATGCAGCCCAGAAGAG
GATGAGGAACCCGACATTTCCAACTTGGATGTCGATTACGAttactttga
aagttttttatggcCCATCCTTGCTGAACGATATCGTGGTATGGAAGAGT
TGAAGGTTTGTCATTCATGGGCAGGTTATTATGATTATAATACGTTGGAT
CAGAACTGTGTGATTGGTCCACACCCACACATCCAGAATCTGTATTTCAT
AAATGGTTTCAGTGGACATGGTATACAACAATCTCCAGCGGCTGGAAATG
CGATCAGTGAATTAATATTGGAAGGGAAATATGTTGATATTGACTTAACT
CGATTTCAATATGAAAGGATTTTAAATGATAGGCCATTACCGGAGATAAA
TGTTGTATGAGTACTAATAAAAATGCTGCTACTAAGAAAAACATTAACAA
ATACCAAGAAAATCGCCACTAACCAGTGTCAATATAACCAACATTTGAAA
ACATGGTTATTGAAAAGACAGATCCATTATGATGTGGTGATTGTTGGTGG
TGGAGTGATGGGTTCATCTTCAGCATTCTTTCTCAAACATAAAGCACCTT
CATTAAACGTTGCAGTTGTGGAAGGCGATCCCAAGTATTCAAAATCGTCC
AGTTCTTTATCAGTGGGAGGCGTTCGCGAGCAATTCTCAACACCAGAGAA
TATACGTTTGTCACAATGGAGCAGCCATTTCATGAAAAACATTGACCAAT
ATTTATCCATCGATGGTGAAGAACCTTGTATATCCTTTTTCAAATCTTCC
TACTTATTCTTGGCTACAGAATCTGGTGTTGATATATTGAAATCCAATGC
AGAAATTCAAAAAAATTGTGGTGTGGACATCAAATCAGTAGGGTCAGACG
AAATTCATAAATATTTTGAATGGGTTAATACCGATGGTATCGCTGCTGCT
AATATTTACTCTGGAGAAAAGGAGGGCAGTTTTGATGGTTGGTGTTTATT
GCAAGCTTTCAAGAAGAAAGCAGAACAAATCGGTGTACATTATATCAAAG
GAGATTGCCAAAAGATTGATGTTGGTACCACTGTCAAGGGCATTACTGTA
GATTGCGATGGTCAAGCGATGAATATAGAATGCGATTCTCTGGTGAATGC
AGCTGGTCCTTGGGCTGGTGAACTCATGTCCAAAATTAACCTCCATTTAC
CTGTTGTGCCAAGAAAACGATATGTTTTTGCTTTCGATTGTCCAAAAGGT
CCTGGAAGGGCAGCTCCGCTTACTGTGGACCCGACCGGCGTTTATTTTAA
ACCGGACGGACAGACTGGAACAAGATATCTTTGTGGATGCAGCCCAGAAG
AGGATGAGGAACCCGACATTTCCAACTTGGATGTCGATTACGAttacttt
gaaagttttttatggcCCATCCTTGCTGAACGATATCGTGGTATGGAAGA
GTTGAAGGTTTGTCATTCATGGGCAGGTTATTATGATTATAATACGTTGG
ATCAGAACTGTGTGATTGGTCCACACCCACACATCCAGAATCTGTATTTC
ATAAATGGTTTCAGTGGACATGGTATACAACAATCTCCAGCGGCTGGAAA
TGCGATCAGTGAATTAATATTGGAAGGGAAATATGTTGATATTGACTTAA
CTCGATTTCAATATGAAAGGATTTTAAATGATAGGCCATTACCGGAGATA
AATGTTGTATGAGTACTAATAAAAATGCTGCTACTAAGAAAAACATTAAC
AAATACCAAGAAAATCGCCACTAACCAGTGTCAATATAACCAACATTTGA
AAACATGGTTATTGAAAAGACAGATCCATTATGATGTGGTGATTGTTGGT
GGTGGAGTGATGGGTTCATCTTCAGCATTCTTTCTCAAACATAAAGCACC
TTCATTAAACGTTGCAGTTGTGGAAGGCGATCCCAAGTATTCAAAATCGT
CCAGTTCTTTATCAGTGGGAGGCGTTCGCGAGCAATTCTCAACACCAGAG
AATATACGTTTGTCACAATGGAGCAGCCATTTCATGAAAAACATTGACCA
ATATTTATCCATCGATGGTGAAGAACCTTGTATATCCTTTTTCAAATCTT
CCTACTTATTCTTGGCTACAGAATCTGGTGTTGATATATTGAAATCCAAT
GCAGAAATTCAAAAAAATTGTGGTGTGGACATCAAATCAGTAGGGTCAGA
CGAAATTCATAAATATTTTGAATGGGTTAATACCGATGGTATCGCTGCTG
CTAATATTTACTCTGGAGAAAAGGAGGGCAGTTTTGATGGTTGGTGTTTA
TTGCAAGCTTTCAAGAAGAAAGCAGAACAAATCGGTGTACATTATATCAA
AGGAGATTGCCAAAAGATTGATGTTGGTACCACTGTCAAGGGCATTACTG
TAGATTGCGATGGTCAAGCGATGAATATAGAATGCGATTCTCTGGTGAAT
GCAGCTGGTCCTTGGGCTGGTGAACTCATGTCCAAAATTAACCTCCATTT
ACCTGTTGTGCCAAGAAAACGATATGTTTTTGCTTTCGATTGTCCAAAAG
GTCCTGGAAGGGCAGCTCCGCTTACTGTGGACCCGACCGGCGTTTATTTT
AAACCGGACGGACAGACTGGAACAAGATATCTTTGTGGATGCAGCCCAGA
AGAGGATGAGGAACCCGACATTTCCAACTTGGATGTCGATTACGAttact
ttgaaagttttttatggcCCATCCTTGCTGAACGATATCGTGGTATGGAA
GAGTTGAAGGTTTGTCATTCATGGGCAGGTTATTATGATTATAATACGTT
GGATCAGAACTGTGTGATTGGTCCACACCCACACATCCAGAATCTGTATT
TCATAAATGGTTTCAGTGGACATGGTATACAACAATCTCCAGCGGCTGGA
AATGCGATCAGTGAATTAATATTGGAAGGGAAATATGTTGATATTGACTT
AACTCGATTTCAATATGAAAGGATTTTAAATGATAGGCCATTACCGGAGA
TAAATGTTGTATGA
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this transcript:
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00006735-exon-sc0000070-1491911889:254462..254688 | TCONS_00006735-exon-sc0000070-1491911889:254462..254688 | Clytia hemisphaerica | exon |
| TCONS_00006735-exon-sc0000070-1510915933:254462..254688 | TCONS_00006735-exon-sc0000070-1510915933:254462..254688 | Clytia hemisphaerica | exon |
| TCONS_00006735-exon-sc0000070-1575043694:254462..254688 | TCONS_00006735-exon-sc0000070-1575043694:254462..254688 | Clytia hemisphaerica | exon |
| TCONS_00006735-exon-sc0000070-1491911889:255156..255382 | TCONS_00006735-exon-sc0000070-1491911889:255156..255382 | Clytia hemisphaerica | exon |
| TCONS_00006735-exon-sc0000070-1510915933:255156..255382 | TCONS_00006735-exon-sc0000070-1510915933:255156..255382 | Clytia hemisphaerica | exon |
| TCONS_00006735-exon-sc0000070-1575043694:255156..255382 | TCONS_00006735-exon-sc0000070-1575043694:255156..255382 | Clytia hemisphaerica | exon |
| TCONS_00006735-exon-sc0000070-1491911889:255656..255750 | TCONS_00006735-exon-sc0000070-1491911889:255656..255750 | Clytia hemisphaerica | exon |
| TCONS_00006735-exon-sc0000070-1510915933:255656..255750 | TCONS_00006735-exon-sc0000070-1510915933:255656..255750 | Clytia hemisphaerica | exon |
| TCONS_00006735-exon-sc0000070-1575043694:255656..255750 | TCONS_00006735-exon-sc0000070-1575043694:255656..255750 | Clytia hemisphaerica | exon |
| TCONS_00006735-exon-sc0000070-1491911889:256891..257030 | TCONS_00006735-exon-sc0000070-1491911889:256891..257030 | Clytia hemisphaerica | exon |
| TCONS_00006735-exon-sc0000070-1510915933:256891..257030 | TCONS_00006735-exon-sc0000070-1510915933:256891..257030 | Clytia hemisphaerica | exon |
| TCONS_00006735-exon-sc0000070-1575043694:256891..257030 | TCONS_00006735-exon-sc0000070-1575043694:256891..257030 | Clytia hemisphaerica | exon |
| TCONS_00006735-exon-sc0000070-1491911889:257753..258007 | TCONS_00006735-exon-sc0000070-1491911889:257753..258007 | Clytia hemisphaerica | exon |
| TCONS_00006735-exon-sc0000070-1510915933:257753..258007 | TCONS_00006735-exon-sc0000070-1510915933:257753..258007 | Clytia hemisphaerica | exon |
| TCONS_00006735-exon-sc0000070-1575043694:257753..258007 | TCONS_00006735-exon-sc0000070-1575043694:257753..258007 | Clytia hemisphaerica | exon |
| TCONS_00006735-exon-sc0000070-1491911889:258915..259019 | TCONS_00006735-exon-sc0000070-1491911889:258915..259019 | Clytia hemisphaerica | exon |
| TCONS_00006735-exon-sc0000070-1510915933:258915..259019 | TCONS_00006735-exon-sc0000070-1510915933:258915..259019 | Clytia hemisphaerica | exon |
| TCONS_00006735-exon-sc0000070-1575043694:258915..259019 | TCONS_00006735-exon-sc0000070-1575043694:258915..259019 | Clytia hemisphaerica | exon |
| TCONS_00006735-exon-sc0000070-1491911889:259752..260378 | TCONS_00006735-exon-sc0000070-1491911889:259752..260378 | Clytia hemisphaerica | exon |
| TCONS_00006735-exon-sc0000070-1510915933:259752..260378 | TCONS_00006735-exon-sc0000070-1510915933:259752..260378 | Clytia hemisphaerica | exon |
| TCONS_00006735-exon-sc0000070-1575043694:259752..260378 | TCONS_00006735-exon-sc0000070-1575043694:259752..260378 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000070 | supercontig | sc0000070:254462..260378 + |
Annotated Terms
The following terms have been associated with this transcript:
Vocabulary: INTERPRO
| Term | Definition |
|---|
| IPR006076 | FAD-dep_OxRdtase |
| IPR023753 | FAD/NAD-binding_dom |
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0016491 | oxidoreductase activity |
Vocabulary: Biological Process
| Term | Definition |
|---|
| GO:0055114 | oxidation-reduction process |
GO Annotation
GO Assignments
This transcript is annotated with the following GO terms.
| Category |
Term Accession |
Term Name |
| biological_process |
GO:0055114 |
oxidation-reduction process |
| molecular_function |
GO:0016491 |
oxidoreductase activity |
Blast
BLAST of TCONS_00006735 vs. Swiss-Prot (Human)
Match: FXRD1 (FAD-dependent oxidoreductase domain-containing protein 1 OS=Homo sapiens GN=FOXRED1 PE=1 SV=2) HSP 1 Score: 316.62 bits (810), Expect = 1.444e-100 Identity = 162/405 (40.00%), Postives = 247/405 (60.99%), Query Frame = 3
Query: 174 LKHKAPSLNVAVVEGDPKYXXXXXXXXVGGVREQFSTPENIRLSQWSSHFMKNIDQYLSIDGEEPC-ISFFKSSYLFLATESGVDILKSNAEIQKNCGVDIKSVGSDEIHKYFEWVNTDGIAAANIYSGEKEGSFDGWCLLQAFKKKAEQIGVHYIKGDCQKIDVGTTVKGITVDCDGQAMN-----------------IECDSLVNAAGPWAGELMSKINL-----------HLPVVPRKRYVFAFDCPKGPGRAAPLTVDPTGVYFKPDGQTGTRYLCGCSPEEDEEPDISNLDVDYDYFESFLWPILAERYRGMEELKVCHSWAGYYDYNTLDQNCVIGPHPHIQNLYFINGFSGHGIQQSPAAGNAISELILEGKYVDIDLTRFQYERILNDRPLPEINVV 1301
L+ + ++ V VVE D YS++S+ LSVGG+ +QFS PENI+LS +S+ F++NI++YL++ P + F S YL LA+E ++SN ++Q+ G + + D++ F W+NT+G+A A+ Y E EG FD WCLLQ ++K + +GV + +G+ + V ++ + +T D + +EC ++NAAG W+ ++ + + LPV PRKRYV+ + CP+GPG PL D +G YF+ +G G+ YL G SP E EEPD +NL+VD+D+F+ +WP LA R E LKV +WAGYYDYNT DQN V+GPHP + N+YF GFSGHG+QQ+P G A++E++L+G++ IDL+ F + R + E N++
Sbjct: 85 LESRRGAIRVLVVERDHTYSQASTGLSVGGICQQFSLPENIQLSLFSASFLRNINEYLAVVDAPPLDLRFNPSGYLLLASEKDAAAMESNVKVQRQEGAKVSLMSPDQLRNKFPWINTEGVALAS-YGMEDEGWFDPWCLLQGLRRKVQSLGVLFCQGEVTRF-VSSSQRMLTTDDKAVVLKRIHEVHVKMDRSLEYQPVECAIVINAAGAWSAQIAALAGVGEGPPGTLQGTKLPVEPRKRYVYVWHCPQGPGLETPLVADTSGAYFRREG-LGSNYLGGRSPTEQEEPDPANLEVDHDFFQDKVWPHLALRVPAFETLKVQSAWAGYYDYNTFDQNGVVGPHPLVVNMYFATGFSGHGLQQAPGIGRAVAEMVLKGRFQTIDLSPFLFTRFYLGEKIQENNII 486
The following BLAST results are available for this feature:
|
