TCONS_00006727 (transcript) - C. hemisphaerica

Overview
NameTCONS_00006727
Unique NameTCONS_00006727
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length1282

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00006727 ID=TCONS_00006727|Name=TCONS_00006727|organism=Clytia hemisphaerica|type=transcript|length=1282bp
AGAaaagagaaattcaaaaatgcaCTTATCTGTTATAAAGGTGCTTTAAA
AACAGCTGGTAAAGATTACGATTCTACAGCATCTGCGGCCAAAAATTACG
CAAAAGCTTCCAATGAGCTTTCCAAATTGCTGGAAGACAATGATATAGAG
AAACGGCAATGTCTTATAGATGTTATTTCACACTATCAACAAGCACTCGT
ATGTGGAAAAATCACAAAGTCAGCCTTATGGATCGATGATATAACATGCT
CTCTCGGGAAAGTACTGCAAGAGGCGTTGAATATATACGCTGATCTGCCA
GCTGaagaaaaaatcaatgtttaTGAGTCATTTGCCTGTAGTTTAACAAA
TGGGTTTTTCTCTGATGATTTGTATGTTGAAATTGCAAATCTCCTTCTCA
GCCAAGCAATCAATTCTcttcaattaaaaaattttaaagaaagtaaaatT
TGTCTGCAACGAATGAGCCGCCCAATTGAAGAACTTAAGCGGAGTAAAAC
GCCCGAGTTTACAGAACAAGCAGAGACGTTGAAATTGGATTTGAAATATA
ATTTGGCGTTCACAGAATCTCTACAAACTATCCGTATAGGAGATGAGCTT
TTGGAGAGCCATTTGAAAGACCAGGAAGACTTGAGCATGGATATGGTTTA
TACCGTAATTGACCGGTATCATGAAGCGATGGTGTTGGCTAGAGATATTG
AGGTTGAAGTTGAAGCTATCGCCTTGAGTCGTTTAGGATCGGTATACGCA
AAAGTGTTGAAAAGGAAAGACCGTGCTAcagaatgttttaaaaattccat
TGAATTGGCCATGTCTCTCACGCCACGTGTCATGAATGATACTCCATGGT
ATAAAGAAGCCAACGATACCTTGTTAAAGTACCAGCAAAAATCAATCTTG
GCACAAGACGCCAAAAGAGAAGCAGAGCGACAGAAACATCTTACAGAGCT
CTCAGAAGAATTATCAGATCTTTCAACAGCAGCTGAGAACCAAGAAACCA
AAGGATTGGTTTTACACATCTTTGATAAATATCCACCAAAATCAACGTCA
GCTAGGCTTAAAATCCCAACAAAGGAGGACCTGGATGGTTTAGAAGAACC
TAATTTGCGAAAATTCATCCAGAAGATGTTACTATATTATCACCCTGACA
AGGTTGATGAATCAGAGCATGGAAGCAAGTGGAAAGTGTTATGTAATGAA
ATCACCAAAATATTAACATCAAAACTTGAAGTTTTAGAGTGCAAATAGGG
ATAGAAATCGAGAGAATCGTCAATGAAACTTN
Run BLAST on NCBI

protein sequence of TCONS_00006727-protein

>TCONS_00006727-protein ID=TCONS_00006727-protein|Name=TCONS_00006727-protein|organism=Clytia hemisphaerica|type=polypeptide|length=415bp
RKEKFKNALICYKGALKTAGKDYDSTASAAKNYAKASNELSKLLEDNDIE
KRQCLIDVISHYQQALVCGKITKSALWIDDITCSLGKVLQEALNIYADLP
AEEKINVYESFACSLTNGFFSDDLYVEIANLLLSQAINSLQLKNFKESKI
CLQRMSRPIEELKRSKTPEFTEQAETLKLDLKYNLAFTESLQTIRIGDEL
LESHLKDQEDLSMDMVYTVIDRYHEAMVLARDIEVEVEAIALSRLGSVYA
KVLKRKDRATECFKNSIELAMSLTPRVMNDTPWYKEANDTLLKYQQKSIL
AQDAKREAERQKHLTELSEELSDLSTAAENQETKGLVLHIFDKYPPKSTS
ARLKIPTKEDLDGLEEPNLRKFIQKMLLYYHPDKVDESEHGSKWKVLCNE
ITKILTSKLEVLECK
Run BLAST on NCBI

transcript from alignment at sc0000070:170399..174998+

Legend: exonCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00006727 ID=TCONS_00006727|Name=TCONS_00006727|organism=Clytia hemisphaerica|type=transcript|length=4600bp|location=Sequence derived from alignment at sc0000070:170399..174998+ (Clytia hemisphaerica)
AGAaaagagaaattcaaaaatgcaCTTATCTGTTATAAAGGTGCTTTAAA AACAGCTGGTAAAGATTACGATTCTACAGCATCTGCGGCCAAAAATTACG CAAAAGCTTCCAATGAGCTTTCCAAATTGCTGGAAGACAATGATATAGAG AAACGGCAATGTCTTATAGATGTTATTTCACACTATCAACAAGCACTCGT ATGTGGAAAAATCACAAAGTCAGCCTTATGGATCGATGATATAACATGCT CTCTCGGGAAAGTACTGCAAGAGGCGTTGAATATATACGCTGATCTGCCA GCTGaagaaaaaatcaatgtttaTGAGTCATTTGCCTGTAGTTTAACAAA TGGGTTTTTCTCTGATGATTTGTATGTTGAAATTGCAAATCTCCTTCTCA GCCAAGCAATCAATTCTcttcaattaaaaaattttaaagaaagtaaaatT TGTCTGCAACGAATGAGCCGCCCAATTGAAGAACTTAAGCGGAGTAAAAC GCCCGAGTTTACAGAACAAGCAGAGACGTTGAAATTGGATTTGAAATATA ATTTGGCGTTCACAGAATCTCTACAAACTATCCGTATAGGTAATTTTTAG GAGTTTTAACGctcttttaaaatttctaaatacaATTAAAGTGGTTTCAG TGGTCTACGTTAAGGGAATTTCCGTTCGAAAGAAATTTGGTGGATTTGAC GCTTTTAGCGAAAATTGTTTTTCTATCATCTGACATATTAAACTCTCGCC AAAATTCGATTTTTCCAGCCATCTGCAAATTTAAGTTACCCTTTAAAATT CCTTCCTTTAAGCTACAATGAAAAACTTAAAAGCTTTTTTGCACATTTGG GGTTTTAGGAGATGAGCTTTTGGAGAGCCATTTGAAAGACCAGGAAGACT TGAGCATGGATATGGTTTATACCGTAATTGACCGGTATCATGAAGCGATG GTGTTGGCTAGAGATATTGAGGTACGTACAAATTAATTTGCTACTTAACA GTTACAGTAGCAAAGATTTATAGTTCAAACCACGAACCATTTTTTTAGGA TACGAGATGCTTTTGCATTTAAATTTGAACAATCAGAACCCGAATTCTCA GTTTAACCTTTAGTCCGCGAGGGACGCGTATACGCGTTCAGATGAATGTT AAAGTGATAATAGGGGCGATATATGATATCATTAACGCTGGTTATGAGCA GAATACTTTCTACAATAGACTTTTGAAATAGTCATTGAAATGTGTCCCTT TACAGTCCCTAAAAATCATGCTCGAAAGAATAATTTAATTCTTTCTCAAT CCTAACCTAATTCTTCTTCAGTGTGGTGTAATTTGGATGACCTGAAAACT ACAGTGTAAACGCGCCCATTGTTTTACCATCAACACAAAATCATGTTTTT TTCTGgttaataagagacaaagatcGTGCAATTCTTTGTTCCAATATTTT CAAGCAACAGTGAGAATACACCCTTATTCTATTTCAGGTTGAAGTTGAAG CTATCGCCTTGAGTCGTTTAGGATCGGTATACGCAAAAGTGTTGAAAAGG AAAGACCGTGCTAcagaatgttttaaaaattccatTGAATTGGCCATGTC TCTCACGCCACGTGTCATGAATGATACTCGTAagtttttttgtaaacaaa cttgTACCCAGTCCCTCGTCGCTTTCATCTGTTCAAGTTCATCAGTAGAA CCCAAAAGCAATATTAGTTGCTCTTAGTAAGGTAGCACTTGTTATATACC AAGAGAAAATGTGATATAAATCGCACTGGACTAAGGTTCAAGTTCAATAT GCTCCATGATTTTGAATCTAAGGAAGGATCCGCATGGACCCCTTCCCTTT TTGCGgactaaaaagtcaaaaaccttAAAAACCTGTTTTGATCACCGTGA AAATTCATCAGAGCGAAAAATTTTCGAATGATAGCGTAGTAGTAGTTCGA ATAATctcttactcttgtctcccgaatagacgtccccccgctaattgtta aaagcaaaaaaaatcNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNttgctacggcactgtaacagcagttaaaaaaattatgtcttCAAATCA ACCCACCACCTCTTATTCAATCCACCCCActtattagaatttaaaaaatt ttcctacccccctgcttattcggaccccgtctattcgggagacaagagta agggTCCATTGTCACGTTGTTTCACCACAATGATGTTACATTTTGAATTA CATTAGCATGGTATAAAGAAGCCAACGATACCTTGTTAAAGTACCAGCAA AAATCAATCTTGGCACAAGACGCCAAAAGAGAAGCAGAGCGACAGAAACA TCTTACAGTGAGTAATACATAGAAATATCTGAAGGATAAATTGAAAACTA TAGAATGTCAATAAGGGCTACTGTGCCGATACGTATATCTGTTGCACTGA CATCATTGTGATAGCAAACTACTAAACTTCACGAATTTACATTACTTGTG GCCTCTCATACTACACGTGGTTACTGGATTGATCGAGTCTAAAACATGAC ACTGTTCCCGGATCTGTATGTGTGGGGACTATATAGCTCAGTGGGTAGAG AAGTTGCACTAGTAATGCGAAAGTCGTGAGTTCAATCCTCACTTCAGCCT TCAGTTTAGTATTAGTAGTTCGCTATCTAACTGAGGTCAATGCGCAGATA TTCATGCAAATCTTTGAATATCATAAAACGACTTCTTCgatttttctatt gtaaacttgGTCAAGCCTTTGCAGGTGGTATCAGGAAAACATTCCAGGAA AAAAGGTGTTTGATAGTTGTTAAACAGGCTTTATGACATGTTGTATTTCA TTATTTCATTCAGGAGCTCTCAGAAGAATTATCAGATCTTTCAACAGCAG CTGAGAACCAAGAAACCAAAGGATTGGTTTTACACATCTTTGATAAATAT CCACCAAAATCAACGTCAGCTAGGCTTAAAATCCCAACAAAGGAGGACCT GGATGGTTTAGAAGAACCTAATTTGCGAAAATTCATCCAGAAGATGTTAC TATATTATCACCCTGACAAGGTTGATGAATCAGAGCATGGAAGCAAGTGG AAAGTGTTATGTAATGAAATCACCAAAATATTAACATCAAAACTTGAAGT TTTAGAGTGCAAATAGGGATAGAAATCGAGAGAATCGTCAATGAAACTTN

Coding sequence (CDS) from alignment at sc0000070:170399..174998+

>TCONS_00006727 ID=TCONS_00006727|Name=TCONS_00006727|organism=Clytia hemisphaerica|type=CDS|length=6240bp|location=Sequence derived from alignment at sc0000070:170399..174998+ (Clytia hemisphaerica)
AGAaaagagaaattcaaaaatgcaCTTATCTGTTATAAAGGTGCTTTAAA
AACAGCTGGTAAAGATTACGATTCTACAGCATCTGCGGCCAAAAATTACG
CAAAAGCTTCCAATGAGCTTTCCAAATTGCTGGAAGACAATGATATAGAG
AAACGGCAATGTCTTATAGATGTTATTTCACACTATCAACAAGCACTCGT
ATGTGGAAAAATCACAAAGTCAGCCTTATGGATCGATGATATAACATGCT
CTCTCGGGAAAGTACTGCAAGAGGCGTTGAATATATACGCTGATCTGCCA
GCTGaagaaaaaatcaatgtttaTGAGTCATTTGCCTGTAGTTTAACAAA
TGGGTTTTTCTCTGATGATTTGTATGTTGAAATTGCAAATCTCCTTCTCA
GCCAAGCAATCAATTCTcttcaattaaaaaattttaaagaaagtaaaatT
TGTCTGCAACGAATGAGCCGCCCAATTGAAGAACTTAAGCGGAGTAAAAC
GCCCGAGTTTACAGAACAAGCAGAGACGTTGAAATTGGATTTGAAATATA
ATTTGGCGTTCACAGAATCTCTACAAACTATCCGTATAGGAGATGAGCTT
TTGGAGAGCCATTTGAAAGACCAGGAAGACTTGAGCATGGATATGGTTTA
TACCGTAATTGACCGGTATCATGAAGCGATGGTGTTGGCTAGAGATATTG
AGGTTGAAGTTGAAGCTATCGCCTTGAGTCGTTTAGGATCGGTATACGCA
AAAGTGTTGAAAAGGAAAGACCGTGCTAcagaatgttttaaaaattccat
TGAATTGGCCATGTCTCTCACGCCACGTGTCATGAATGATACTCCATGGT
ATAAAGAAGCCAACGATACCTTGTTAAAGTACCAGCAAAAATCAATCTTG
GCACAAGACGCCAAAAGAGAAGCAGAGCGACAGAAACATCTTACAGAGCT
CTCAGAAGAATTATCAGATCTTTCAACAGCAGCTGAGAACCAAGAAACCA
AAGGATTGGTTTTACACATCTTTGATAAATATCCACCAAAATCAACGTCA
GCTAGGCTTAAAATCCCAACAAAGGAGGACCTGGATGGTTTAGAAGAACC
TAATTTGCGAAAATTCATCCAGAAGATGTTACTATATTATCACCCTGACA
AGGTTGATGAATCAGAGCATGGAAGCAAGTGGAAAGTGTTATGTAATGAA
ATCACCAAAATATTAACATCAAAACTTGAAGTTTTAGAGTGCAAATAGAG
AaaagagaaattcaaaaatgcaCTTATCTGTTATAAAGGTGCTTTAAAAA
CAGCTGGTAAAGATTACGATTCTACAGCATCTGCGGCCAAAAATTACGCA
AAAGCTTCCAATGAGCTTTCCAAATTGCTGGAAGACAATGATATAGAGAA
ACGGCAATGTCTTATAGATGTTATTTCACACTATCAACAAGCACTCGTAT
GTGGAAAAATCACAAAGTCAGCCTTATGGATCGATGATATAACATGCTCT
CTCGGGAAAGTACTGCAAGAGGCGTTGAATATATACGCTGATCTGCCAGC
TGaagaaaaaatcaatgtttaTGAGTCATTTGCCTGTAGTTTAACAAATG
GGTTTTTCTCTGATGATTTGTATGTTGAAATTGCAAATCTCCTTCTCAGC
CAAGCAATCAATTCTcttcaattaaaaaattttaaagaaagtaaaatTTG
TCTGCAACGAATGAGCCGCCCAATTGAAGAACTTAAGCGGAGTAAAACGC
CCGAGTTTACAGAACAAGCAGAGACGTTGAAATTGGATTTGAAATATAAT
TTGGCGTTCACAGAATCTCTACAAACTATCCGTATAGGAGATGAGCTTTT
GGAGAGCCATTTGAAAGACCAGGAAGACTTGAGCATGGATATGGTTTATA
CCGTAATTGACCGGTATCATGAAGCGATGGTGTTGGCTAGAGATATTGAG
GTTGAAGTTGAAGCTATCGCCTTGAGTCGTTTAGGATCGGTATACGCAAA
AGTGTTGAAAAGGAAAGACCGTGCTAcagaatgttttaaaaattccatTG
AATTGGCCATGTCTCTCACGCCACGTGTCATGAATGATACTCCATGGTAT
AAAGAAGCCAACGATACCTTGTTAAAGTACCAGCAAAAATCAATCTTGGC
ACAAGACGCCAAAAGAGAAGCAGAGCGACAGAAACATCTTACAGAGCTCT
CAGAAGAATTATCAGATCTTTCAACAGCAGCTGAGAACCAAGAAACCAAA
GGATTGGTTTTACACATCTTTGATAAATATCCACCAAAATCAACGTCAGC
TAGGCTTAAAATCCCAACAAAGGAGGACCTGGATGGTTTAGAAGAACCTA
ATTTGCGAAAATTCATCCAGAAGATGTTACTATATTATCACCCTGACAAG
GTTGATGAATCAGAGCATGGAAGCAAGTGGAAAGTGTTATGTAATGAAAT
CACCAAAATATTAACATCAAAACTTGAAGTTTTAGAGTGCAAATAGAGAa
aagagaaattcaaaaatgcaCTTATCTGTTATAAAGGTGCTTTAAAAACA
GCTGGTAAAGATTACGATTCTACAGCATCTGCGGCCAAAAATTACGCAAA
AGCTTCCAATGAGCTTTCCAAATTGCTGGAAGACAATGATATAGAGAAAC
GGCAATGTCTTATAGATGTTATTTCACACTATCAACAAGCACTCGTATGT
GGAAAAATCACAAAGTCAGCCTTATGGATCGATGATATAACATGCTCTCT
CGGGAAAGTACTGCAAGAGGCGTTGAATATATACGCTGATCTGCCAGCTG
aagaaaaaatcaatgtttaTGAGTCATTTGCCTGTAGTTTAACAAATGGG
TTTTTCTCTGATGATTTGTATGTTGAAATTGCAAATCTCCTTCTCAGCCA
AGCAATCAATTCTcttcaattaaaaaattttaaagaaagtaaaatTTGTC
TGCAACGAATGAGCCGCCCAATTGAAGAACTTAAGCGGAGTAAAACGCCC
GAGTTTACAGAACAAGCAGAGACGTTGAAATTGGATTTGAAATATAATTT
GGCGTTCACAGAATCTCTACAAACTATCCGTATAGGAGATGAGCTTTTGG
AGAGCCATTTGAAAGACCAGGAAGACTTGAGCATGGATATGGTTTATACC
GTAATTGACCGGTATCATGAAGCGATGGTGTTGGCTAGAGATATTGAGGT
TGAAGTTGAAGCTATCGCCTTGAGTCGTTTAGGATCGGTATACGCAAAAG
TGTTGAAAAGGAAAGACCGTGCTAcagaatgttttaaaaattccatTGAA
TTGGCCATGTCTCTCACGCCACGTGTCATGAATGATACTCCATGGTATAA
AGAAGCCAACGATACCTTGTTAAAGTACCAGCAAAAATCAATCTTGGCAC
AAGACGCCAAAAGAGAAGCAGAGCGACAGAAACATCTTACAGAGCTCTCA
GAAGAATTATCAGATCTTTCAACAGCAGCTGAGAACCAAGAAACCAAAGG
ATTGGTTTTACACATCTTTGATAAATATCCACCAAAATCAACGTCAGCTA
GGCTTAAAATCCCAACAAAGGAGGACCTGGATGGTTTAGAAGAACCTAAT
TTGCGAAAATTCATCCAGAAGATGTTACTATATTATCACCCTGACAAGGT
TGATGAATCAGAGCATGGAAGCAAGTGGAAAGTGTTATGTAATGAAATCA
CCAAAATATTAACATCAAAACTTGAAGTTTTAGAGTGCAAATAGAGAaaa
gagaaattcaaaaatgcaCTTATCTGTTATAAAGGTGCTTTAAAAACAGC
TGGTAAAGATTACGATTCTACAGCATCTGCGGCCAAAAATTACGCAAAAG
CTTCCAATGAGCTTTCCAAATTGCTGGAAGACAATGATATAGAGAAACGG
CAATGTCTTATAGATGTTATTTCACACTATCAACAAGCACTCGTATGTGG
AAAAATCACAAAGTCAGCCTTATGGATCGATGATATAACATGCTCTCTCG
GGAAAGTACTGCAAGAGGCGTTGAATATATACGCTGATCTGCCAGCTGaa
gaaaaaatcaatgtttaTGAGTCATTTGCCTGTAGTTTAACAAATGGGTT
TTTCTCTGATGATTTGTATGTTGAAATTGCAAATCTCCTTCTCAGCCAAG
CAATCAATTCTcttcaattaaaaaattttaaagaaagtaaaatTTGTCTG
CAACGAATGAGCCGCCCAATTGAAGAACTTAAGCGGAGTAAAACGCCCGA
GTTTACAGAACAAGCAGAGACGTTGAAATTGGATTTGAAATATAATTTGG
CGTTCACAGAATCTCTACAAACTATCCGTATAGGAGATGAGCTTTTGGAG
AGCCATTTGAAAGACCAGGAAGACTTGAGCATGGATATGGTTTATACCGT
AATTGACCGGTATCATGAAGCGATGGTGTTGGCTAGAGATATTGAGGTTG
AAGTTGAAGCTATCGCCTTGAGTCGTTTAGGATCGGTATACGCAAAAGTG
TTGAAAAGGAAAGACCGTGCTAcagaatgttttaaaaattccatTGAATT
GGCCATGTCTCTCACGCCACGTGTCATGAATGATACTCCATGGTATAAAG
AAGCCAACGATACCTTGTTAAAGTACCAGCAAAAATCAATCTTGGCACAA
GACGCCAAAAGAGAAGCAGAGCGACAGAAACATCTTACAGAGCTCTCAGA
AGAATTATCAGATCTTTCAACAGCAGCTGAGAACCAAGAAACCAAAGGAT
TGGTTTTACACATCTTTGATAAATATCCACCAAAATCAACGTCAGCTAGG
CTTAAAATCCCAACAAAGGAGGACCTGGATGGTTTAGAAGAACCTAATTT
GCGAAAATTCATCCAGAAGATGTTACTATATTATCACCCTGACAAGGTTG
ATGAATCAGAGCATGGAAGCAAGTGGAAAGTGTTATGTAATGAAATCACC
AAAATATTAACATCAAAACTTGAAGTTTTAGAGTGCAAATAGAGAaaaga
gaaattcaaaaatgcaCTTATCTGTTATAAAGGTGCTTTAAAAACAGCTG
GTAAAGATTACGATTCTACAGCATCTGCGGCCAAAAATTACGCAAAAGCT
TCCAATGAGCTTTCCAAATTGCTGGAAGACAATGATATAGAGAAACGGCA
ATGTCTTATAGATGTTATTTCACACTATCAACAAGCACTCGTATGTGGAA
AAATCACAAAGTCAGCCTTATGGATCGATGATATAACATGCTCTCTCGGG
AAAGTACTGCAAGAGGCGTTGAATATATACGCTGATCTGCCAGCTGaaga
aaaaatcaatgtttaTGAGTCATTTGCCTGTAGTTTAACAAATGGGTTTT
TCTCTGATGATTTGTATGTTGAAATTGCAAATCTCCTTCTCAGCCAAGCA
ATCAATTCTcttcaattaaaaaattttaaagaaagtaaaatTTGTCTGCA
ACGAATGAGCCGCCCAATTGAAGAACTTAAGCGGAGTAAAACGCCCGAGT
TTACAGAACAAGCAGAGACGTTGAAATTGGATTTGAAATATAATTTGGCG
TTCACAGAATCTCTACAAACTATCCGTATAGGAGATGAGCTTTTGGAGAG
CCATTTGAAAGACCAGGAAGACTTGAGCATGGATATGGTTTATACCGTAA
TTGACCGGTATCATGAAGCGATGGTGTTGGCTAGAGATATTGAGGTTGAA
GTTGAAGCTATCGCCTTGAGTCGTTTAGGATCGGTATACGCAAAAGTGTT
GAAAAGGAAAGACCGTGCTAcagaatgttttaaaaattccatTGAATTGG
CCATGTCTCTCACGCCACGTGTCATGAATGATACTCCATGGTATAAAGAA
GCCAACGATACCTTGTTAAAGTACCAGCAAAAATCAATCTTGGCACAAGA
CGCCAAAAGAGAAGCAGAGCGACAGAAACATCTTACAGAGCTCTCAGAAG
AATTATCAGATCTTTCAACAGCAGCTGAGAACCAAGAAACCAAAGGATTG
GTTTTACACATCTTTGATAAATATCCACCAAAATCAACGTCAGCTAGGCT
TAAAATCCCAACAAAGGAGGACCTGGATGGTTTAGAAGAACCTAATTTGC
GAAAATTCATCCAGAAGATGTTACTATATTATCACCCTGACAAGGTTGAT
GAATCAGAGCATGGAAGCAAGTGGAAAGTGTTATGTAATGAAATCACCAA
AATATTAACATCAAAACTTGAAGTTTTAGAGTGCAAATAG
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_003771XLOC_003771Clytia hemisphaericagene
The following polypeptide feature(s) derives from this transcript:
Feature NameUnique NameSpeciesType
TCONS_00006727-proteinTCONS_00006727-proteinClytia hemisphaericapolypeptide
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00006727-exon-sc0000070-1491911889:170399..170987TCONS_00006727-exon-sc0000070-1491911889:170399..170987Clytia hemisphaericaexon
TCONS_00006727-exon-sc0000070-1510915933:170399..170987TCONS_00006727-exon-sc0000070-1510915933:170399..170987Clytia hemisphaericaexon
TCONS_00006727-exon-sc0000070-1575043694:170399..170987TCONS_00006727-exon-sc0000070-1575043694:170399..170987Clytia hemisphaericaexon
TCONS_00006727-exon-sc0000070-1491911889:171257..171369TCONS_00006727-exon-sc0000070-1491911889:171257..171369Clytia hemisphaericaexon
TCONS_00006727-exon-sc0000070-1510915933:171257..171369TCONS_00006727-exon-sc0000070-1510915933:171257..171369Clytia hemisphaericaexon
TCONS_00006727-exon-sc0000070-1575043694:171257..171369TCONS_00006727-exon-sc0000070-1575043694:171257..171369Clytia hemisphaericaexon
TCONS_00006727-exon-sc0000070-1491911889:171886..172027TCONS_00006727-exon-sc0000070-1491911889:171886..172027Clytia hemisphaericaexon
TCONS_00006727-exon-sc0000070-1510915933:171886..172027TCONS_00006727-exon-sc0000070-1510915933:171886..172027Clytia hemisphaericaexon
TCONS_00006727-exon-sc0000070-1575043694:171886..172027TCONS_00006727-exon-sc0000070-1575043694:171886..172027Clytia hemisphaericaexon
TCONS_00006727-exon-sc0000070-1491911889:174055..174155TCONS_00006727-exon-sc0000070-1491911889:174055..174155Clytia hemisphaericaexon
TCONS_00006727-exon-sc0000070-1510915933:174055..174155TCONS_00006727-exon-sc0000070-1510915933:174055..174155Clytia hemisphaericaexon
TCONS_00006727-exon-sc0000070-1575043694:174055..174155TCONS_00006727-exon-sc0000070-1575043694:174055..174155Clytia hemisphaericaexon
TCONS_00006727-exon-sc0000070-1491911889:174662..174998TCONS_00006727-exon-sc0000070-1491911889:174662..174998Clytia hemisphaericaexon
TCONS_00006727-exon-sc0000070-1510915933:174662..174998TCONS_00006727-exon-sc0000070-1510915933:174662..174998Clytia hemisphaericaexon
TCONS_00006727-exon-sc0000070-1575043694:174662..174998TCONS_00006727-exon-sc0000070-1575043694:174662..174998Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000070supercontigsc0000070:170399..174998 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0 0 0 0 0 0 0 0 0.00849767 0.27605 0.121843 0.264246 1.67988 1.82694 0 0 0.361126 0.483375 1.589 0.936448 0.0721217 0.170148 0 0.501455 0.887486 1.37395 0 0 0 0
Annotated Terms
The following terms have been associated with this transcript:
Vocabulary: INTERPRO
TermDefinition
IPR011990TPR-like_helical_dom
Vocabulary: Molecular Function
TermDefinition
GO:0005515protein binding
GO Annotation
GO Assignments
This transcript is annotated with the following GO terms.
Category Term Accession Term Name
molecular_function GO:0005515 protein binding
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00006727 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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