TCONS_00006699 (transcript) - C. hemisphaerica

Overview
NameTCONS_00006699
Unique NameTCONS_00006699
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length146

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00006699 ID=TCONS_00006699|Name=TCONS_00006699|organism=Clytia hemisphaerica|type=transcript|length=146bp
CAGGTTCTTCAAGAAGCATGGGTCAAAGTACACAGtgacaaaaaatgtaa
aagattaTATGGTGCTAGCGAAATCACAGACCGAATGTTTTGCGCTAATC
GAGGCAAGAGGAAAGTTCGTGATACATGCCAAGGAGACTCAGGTAT
Run BLAST on NCBI

transcript from alignment at sc0000069:862..1007

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00006699 ID=TCONS_00006699|Name=TCONS_00006699|organism=Clytia hemisphaerica|type=transcript|length=146bp|location=Sequence derived from alignment at sc0000069:862..1007 (Clytia hemisphaerica)
ATACCTGAGTCTCCTTGGCATGTATCACGAACTTTCCTCTTGCCTCGATT
AGCGCAAAACATTCGGTCTGTGATTTCGCTAGCACCATAtaatcttttac
attttttgtcaCTGTGTACTTTGACCCATGCTTCTTGAAGAACCTG
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_003745XLOC_003745Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00006699-exon-sc0000069-1491911889:862..1007TCONS_00006699-exon-sc0000069-1491911889:862..1007Clytia hemisphaericaexon
TCONS_00006699-exon-sc0000069-1510915933:862..1007TCONS_00006699-exon-sc0000069-1510915933:862..1007Clytia hemisphaericaexon
TCONS_00006699-exon-sc0000069-1575043694:862..1007TCONS_00006699-exon-sc0000069-1575043694:862..1007Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000069supercontigsc0000069:862..1007 .
Expression
No biomaterial libraries express this feature.
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00006699 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
back to top