TCONS_00006612 (transcript) - C. hemisphaerica

Overview
NameTCONS_00006612
Unique NameTCONS_00006612
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length4652

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00006612 ID=TCONS_00006612|Name=TCONS_00006612|organism=Clytia hemisphaerica|type=transcript|length=4652bp
GGACGAACACAAGGCCAATCACCCATCTTATGTTGACCACTCAGGTCACG
TGATTAAGCTCCATGGAAACGGCAAACAAAAACATGACAGTCACAAAGAT
GAACATGTTTTTCATAACAATTTAGCAGAGGATCTAGATATGGCAATGTC
TGAACCTAAATGGGAATTTAAAGACCGTGATTTCAGTGTGTCCAATGATC
ACGATATGAAGTTCAACCATCCACATCACCAAGCACACCATGGTCACACT
GAGTCTCATGCAAAATCCAACGCTGGACAAACAAACATGTATGAAGTTTT
GACGTCCAAATCGaaagGCAAACACAGTAAACGTCACAAATCCACCTCAA
CGAAGGATAACACACTCCCAAAGAAATGCATCAATGGGGAAGGGTGTACC
AAACGTCAATTCGAATCTCCACCATTTTTTAATGCACTCCACCACAATGA
TGTTCCATTCGATTTAAAACCTTATTACGAAAATTTACATCACAGCGATG
GAGCGTTAACACACCACCACGGAGGTCTACACACTCCAGGTTTAGGAGGT
CATGGAACATACAGAGGACCGCAGTATCCTCCCAATGAGCATCTTGATTT
ATATCCTTCAGATATTCATCATTCTCCACCAATGGAAATCGACCATACTG
ATTACTATGATGACGTTGAGCTACCTCACGTGACACCTATAGATCACATG
ACTCAACAATCTCACGAAGTTTTGACGAGCTCACAATATCACCCTTATAC
TGATTCAGTAGAAAGTACTTATGGCGGCTGGGCGGATTCTCAGGGTGGTG
CACAGTATGGTAGTTCAGTAACAAGTCCCTATGGAGGCTCAAACCATCCT
GTCGATCATCTACCCCATCGTTATCCTTCAACGCCACATGGAGAAAGTAT
TCCACATTTGATTGACCGTTTGACCACGACGCGAAGATGTGAGGGCACGG
ATTGTAAAGATAAGGTGACGTCATTGGGAACCAATCAAAAGTCACCGTCA
GATTTAATTGGCCATCAAACTGAAAATACACGGATCTTAAACCATGTTGT
TAAATTAGCCAATCACGAGGCATCTTTGAGTGAAGAATTGACCAATCCGA
AGCAAGGAAAATCTAAAGAAACTAATGAAAATTACTTAGGCGGTCACGTG
ATTGAAAGCTTGAAACTGGGAGcgcaaattaaaagaaagaatgATACGTT
GAAACATTTGCAGGAAATTTTGCAGCCAGAGAATAAAGAAACTGTCAGGC
TCAGCGGACATAATGAAATGACTCACCATTtgaaagaaacaaagaaaatg
caGAAAAGCAGCCAATCGAAAAATCGTCCGAAAATCAATCCTACAAGCCC
AAATGTTGTTGTTATGAAGAAACCGAAGGGTCAAGATGCACCGCAAGGTT
TGAACAAAGCTGAAGAACTGAAATTAAGACAACAAAGCAAACCGAAACCC
AGCAAAGAAACCGATATCAAGAAAATGGATTCCAAAATACCCGATACTAA
AAAACCGGATAATGTCAAAAAGCCCGATACTAAAAAACCGGATAATGTCA
AAAAGCCGGTAGCGAAAAAAACAaatggaaagaaaaagaaacaaaaacaa
aaagtttatttgGAATCGGCTCTCGGCAAAGAAGGCAAGAAAGTCGACAG
TTCAAAAGTCCAAAGTACAGCAAAAGTCCAAAGTCAATCGAAAGGTCAAA
GTTCGCTACAGTCTCCAAAGAAACCGGAGACAAATTCAAAGAAACCGAGC
AACAAACTTTCCGAATCGGGGAAATCGGGTAAACATAAGAAACCTAAACA
ACCAGCGAAAATCGCGAAACAATCTTCCTCGAACTCAgaaaaaacacctt
tgaaaacgaaagtgaaagcgaAAGCCACCAGATTCGGCGATAATAACCGT
GATGCAAACAAAGGAACTCAAGCAGTATCAGAAACTGTTTCAAACACTCA
GACAGCCGTATCAACCAGCACTGCTAGTCAACAGCAAGCTCAACAAACAA
CCTCCAGTGGTTATAACCAGGACCAAACCCATCAGCCAACGCCCAATGAA
CAACAAACCCAACCTCAAGACACACAATACAACAATAACCAGAATCAACC
AACACCGCCAAACGCCAATAACGCCGCCGTCACACCTCAAATCCCTTCAA
TGAAACCCAAGAAACTCTTAAACAAAGCtttattgacaaaattgaaaagt
GCCTCTTTAAGCcagatgaaatattttacagcgatgacgtcattgttatT
ACATCACATCAATAAGAACGTCAATAAAACACGTCAAATCGCCGTCAATA
ACCCGTTACTAGGACAACAACCATCGGTGAGTGGGGACCAGCAAATCCAA
GACTCTTCTCTCAGCGCGATGACTGGTCAAGGACAGGCTTCAACCACAAA
CACCCAACCAGGCCAAGACACTTCAACAAATACTAATACTTTACAGAACC
AAGGAACTCCGGTTAATACACTTCCAGAACAGGGGAATCCTGCACATGGC
TTATCGAGTCAAGGGCAATCTGTCAACACAATGCAAGGTCAGAATCAAAA
TCAAGACACATCTGCGTTTCCACAGCAACAACAGAACCAACCAATCCAAC
AACAGCATTCTCAACCATTATCCCAGAATGCACCACTACCAGCCAATCAA
AATCCAATCCCCTTCACTCCTCAATCCACTAGATGCGGAAAAAAAACATG
CACATCCAGTGAACTTGGTTTGACAAAGGAGGATTTCTCTTCGACAAACA
ATGGAAAAGAATCTGGTTTTGTCAAAactcatgaaaatattttgccaaca
tTCTTTAAACCAAGGATTGAACCCAAGAAGAGACCAGCTACATTAAAAGT
GAACAAGCCAAAAGAATTGTTCATCGTGCTCGGTGTATCGCACTCCATGT
ACTCAAGACTCCATTTCTCTGATCTTTTCAATTATGCACTGGATTTGTTT
GGACAGTCTCTTGATTACTATGGTTACCAGAGGGCCGCTTTCTTGACTTT
CGGAGGGCCGTCTTATTATTATGTACCATTAACCAATCGAAGTGAATTCT
CAGTGAACagAACTTTGAAAGGTTACAGAAATCTGACGTCAgcattaaat
tttgttgttcAAACAATGGAGCCCCTTAGCAACGGTCGTCGTCAACTAGT
CACCATCCTCCCTGATCGTTTCAAAAAGACGGACAATCAAGAAGTCgaga
aagtgaaagaaaatttacaaaaacatgGTTTCGAAATGTATTGTGTTGGT
GTTGGTAAAAGTTTCGACAAAGACAAAACCTCCATCAAAATGCTGGCATC
TAAACCGATCCATGACCACACGATCAAAGCCTCATATAATTCACTTAATA
AAACAATGCCATTGTTGTTCAAGAAATTGTCACTTGACCGCTTATACACG
AAGACACAAGATAAACACAAACTCAAAGACCAAGCGAAGCAAATCGGAAA
GTTTCGTCATTTCATACCGAATCAATTTCAAGCatcaaataacaataatt
tcgTTCGTTCCTATCTACCAAACGGAGAAGAGTTAAATTTGCGGAATAAA
CATTTTATAGAGAACAATAGTTTCGTTCGTTCCCATCTATCAAATGGAGG
TGAGGGAAATTTACAGAATGAACATTTAATAGAAAGCACTGTACATGCTC
CTGATGACGTGGTTAGTGTGACGTCATCATTCGGCGAAAGTAGTAACAAC
AATAATGGCANGACGTGGTTAGTGTGACGTCATCATTCGGCGAAAGTAGT
AATAACAATAATGGCGAACTCAGAGGGTCACCTGAATCAAATTTACtgct
ttaaaactttattaCTTTCATTCCTCGAAAGTTAAATTCTAGATAATATT
TAGCTTTTTCTTAATTTAGGAATatatttattaattttatttatttttgt
agaTATCTTTTGGAAATTGTATTTATTAATAAcgtaaaacaaattttaaa
attattagtTATTGAAAACTTTCAACTGGTTTCTTACTTATTATGACAAG
GACAATTAACTAAGACcatgtttcggaaccgtttcgttttggaacggaac
ggaaccgtgacatctgaacatggtctaaacgTTCAAGACAGTTCCGACTA
GAGCTAATGAATACTTTTGGAAGGTtggtttcattttgaatatcaCGTTG
TTAGCCTACAAAATTAGCTTGTAAAAGTTATACTACtgtaaaaaaactta
aaattcttttaaaaaaataaccaCTATATAcagattaaaaaaacaaaaaa
ttaagactAACttatagacgatatcggcttcacatgaaaactttgaaaac
tcagatttgacccccgagaattccccacaatgctttgtacGGAgaaaatt
tcaccgtgaactttttttccgcgcaaagcattgtggacaattttcggagg
tcaaatatgagttttcacgttaagccgatatcatCTATTATTCCACAAAA
CTTGGGATAATATATTGATACATGTGTTTATCTTGGCTGATGATAAATAA
ACATTTAGAGATATCATAGATTGAAATATTACAGCCGTCCAAAAGTTGAA
AGCTCGAACTTTATAAATTATACATATTCAAAGCATTTGGTCTTTGGCAT
TCGGTCAGAAACACCTTTCCAAAATCAGAtttaatataaatttttgattg
aG
Run BLAST on NCBI

transcript from alignment at sc0000069:336040..345522-

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00006612 ID=TCONS_00006612|Name=TCONS_00006612|organism=Clytia hemisphaerica|type=transcript|length=9483bp|location=Sequence derived from alignment at sc0000069:336040..345522- (Clytia hemisphaerica)
GGACGAACACAAGGCCAATCACCCATCTTATGTTGACCACTCAGGTCACG
TGATTAAGCTCCATGGAAACGGCAAACAAAAACATGACAGTCACAAAGAT
GAACATGTTTTTCATAACAATTTAGCAGAGGATCTAGATATGGCAATGTC
TGAACCTAAATGGGAATTTAAAGACCGTGATTTCAGTGTGTCCAATGATC
ACGATATGAAGTTCAACCATCCACATCACCAAGCACACCATGGTCACACT
GAGTCTCATGCAAAATCCAACGCTGGACAAACAAACATGTATGAAGTTTT
GACGTCCAAATCGAAAGGTATTTTTTTTCTTTCGTTCGCATTGGGCTCTT
CCAGAAAATTATCGTATATGGGGTGGAGGATATATTGGATATTTTGTCCG
GGGATAGTGAAAAATCTGCAAAATTTGCCCTGTTTGGGGGGGGGGGCAAA
CTTGCTCTGTTTAGGGGTAATTAAAACTTTCCAGGGATCAGCTGATGCTT
GTCCGGGGTTGCTTGTATGTTGTCCGAGGGGTCAAAAGTCACAATGTCCG
GGGGTAAATTTCCTAAAAGTGTTATATCCTCCACCCCCCATATTTGATTT
TTTTTTCTGGAAGAGCCCATTCTCCTCTTTTTCATCATTCCATTCCAATT
CTTTTAATTTGCTTTTCATTTCCTTCTCTCTCTTATGAAGAATACTATCT
AAAATTTAAATCTCCAATGACGCTTTCTTAGGCAATGGACACGTTATTGT
TGAAATAGATTTTTGTCATATTCCCTTTTATACAATTGGATTTTTGCTAA
TTTGAGCTCGAATGTTAAATTTATTTTTTCGAATTAGAGAAAGATTCATA
TATTTGCAGTTCGAAATAGCGAGAGTCCCAGTCTTCGTTATTTTTCAACA
CACAGAAATTTTAGATACTTTTGTACACAGATATATCAAACACTAGATAG
AGCATCTCGCCAGGTTAAACAAATAATGCATTTTGCTAAAAATAGACCAC
AGTGAGTAGAAACCTTGATTTACACTGTTAAAGTATTTTGACACTGCTAC
GACTCTCAAATTGCAAGGCTCAAGCAAAAGATGTGACGTCATTCTATTAA
AGATGGCGCTTAATTTTGCTTAAATTCAGGACTTAAAGCTCCATCAAGTG
TTCTACATAAGATATCGGTGTTTAATACATAGGCAAACACAGTAAACGTC
ACAAATCCACCTCAACGAAGGATAACACACTCCCAAAGAAATGCATCAAT
GGGGAAGGGTGTACCAAACGTCAATTCGAATCTCCACCATTTTTTAATGC
ACTCCACCACAATGATGTTCCATTCGATTTAAAACCTTATTACGAAAATT
TACATCACAGCGATGGAGCGTTAACACACCACCACGGAGGTCTACACACT
CCAGGTTTAGGAGGTCATGGAACATACAGAGGACCGCAGTATCCTCCCAA
TGAGCATCTTGATTTATATCCTTCAGGTATGATGATGAACTCGTTTCGTA
TTTGGACATCTCTTCAGCAAAGTAAATCTTCATCATAATTCTTAAAGTCA
ACTTTCTCTAATTCGAATCTTTCTATAATTCGAACTAAAATACTGGTCCT
CTCAGCGGACCAGTCGTTATATAACACCCTCCCTAAATCGAAATTTTCTC
TGATTCGAAGAACATTTTTGGTCCCATTAAGATCAAATTAGAGAAAGTCA
ACTGTAATTACAAGCGTCAATTGACGATGGAAGAAGAATCTCTCGAAACA
TAGCCAAACGTAAATTTCGTGATCCAAACCACGATAAACTTCCAATATGA
ATATCATCTTCGATAAACTCAAACTTAAGATTCAATTTCAATGAAATTTC
AATAAAATCTCAATTTTCAATCGAGCATCCTTAACTCGAAAAAGTTTGTA
TTCTCCGTAGTGGGTTCGAGTTATGGAGACTCCACTGCATCTCAAATTTT
CTTTCAGCTATGTTAGATAGTCAAAATAATATTGTATGTACGGGAACAAG
TAGGATAGCGCTGGAAATCATAACTCAACTATTCTGTTCTTCTTCTAGAT
ATTCATCATTCTCCACCAATGGAAATCGACCATACTGATTACTATGATGA
CGTTGAGCTACCTCACGTGACACCTATAGATCACATGACTCAACAATCTC
ACGAAGTTTTGACGAGCTCACAATATCACCCTTATACTGATTCAGTAGAA
AGTACTTATGGCGGCTGGGCGGATTCTCAGGGTGGTGCACAGTATGGTAG
TTCAGTAACAAGTCCCTATGGAGGCTCAAACCATCCTGTCGATCATCTAC
CCCATCGTTATCCTTCAACGCCACATGGAGAAAGTATTCCACATTTGATT
GACCGTTTGACCACGACGCGAAGATGTGAGGGCACGGATTGTAAAGATAA
GGTGACGTCATTGGGAACCAATCAAAAGTCACCGTCAGATTTAATTGGCC
ATCAAACTGAAAATACACGGATCTTAAACCATGTTGTTAAATTAGCCAAT
CACGAGGCATCTTTGAGTGAAGAATTGACCAATCCGAAGCAAGGAAAATC
TAAAGAAACTAATGAAAATTACTTAGGCGGTCACGTGATTGAAAGCTTGA
AACTGGGAGCGCAAATTAAAAGAAAGAATGATACGTTGAAACATTTGCAG
GAAATTTTGCAGCCAGAGAATAAAGAAACTGTCAGGCTCAGCGGACATAA
TGAAATGACTCACCATTTGAAAGAAACAAAGAAAATGCAGAAAAGCAGCC
AATCGAAAAATCGTCCGAAAATCAATCCTACAAGCCCAAATGTTGTTGTT
ATGAAGAAACCGAAGGGTCAAGATGCACCGCAAGGTTTGAACAAAGCTGA
AGAACTGAAATTAAGACAACAAAGCAAACCGAAACCCAGCAAAGAAACCG
ATATCAAGAAAATGGATTCCAAAATACCCGATACTAAAAAACCGGATAAT
GTCAAAAAGCCCGATACTAAAAAACCGGATAATGTCAAAAAGCCGGTAGC
GAAAAAAACAAATGGAAAGAAAAAGAAACAAAAACAAAAAGTTTATTTGG
AATCGGCTCTCGGCAAAGAAGGCAAGAAAGTCGACAGTTCAAAAGTCCAA
AGTACAGCAAAAGTCCAAAGTCAATCGAAAGGTCAAAGTTCGCTACAGTC
TCCAAAGAAACCGGAGACAAATTCAAAGAAACCGAGCAACAAACTTTCCG
AATCGGGGAAATCGGGTAAACATAAGAAACCTAAACAACCAGCGAAAATC
GCGAAACAATCTTCCTCGAACTCAGAAAAAACACCTTTGAAAACGAAAGT
GAAAGCGAAAGCCACCAGATTCGGCGATAATAACCGTGATGCAAACAAAG
GAACTCAAGCAGTATCAGAAACTGTTTCAAACACTCAGACAGCCGTATCA
ACCAGCACTGCTAGTCAACAGCAAGCTCAACAAACAACCTCCAGTGGTTA
TAACCAGGACCAAACCCATCAGCCAACGCCCAATGAACAACAAACCCAAC
CTCAAGACACACAATACAACAATAACCAGAATCAACCAACACCGCCAAAC
GCCAATAACGCCGCCGTCACACCTCAAATCCCTTCAATGAAACCCAAGAA
ACTCTTAAACAAAGCTTTATTGACAAAATTGAAAAGTGCCTCTTTAAGCC
AGATGAAATATTTTACAGCGATGACGTCATTGTTATTACATCACATCAAT
AAGAACGTCAATAAAACACGTCAAATCGCCGTCAATAACCCGTTACTAGG
ACAACAACCATCGGTGAGTGGGGACCAGCAAATCCAAGACTCTTCTCTCA
GCGCGATGACTGGTCAAGGACAGGCTTCAACCACAAACACCCAACCAGGC
CAAGACACTTCAACAAATACTAATACTTTACAGAACCAAGGAACTCCGGT
TAATACACTTCCAGAACAGGGGAATCCTGCACATGGCTTATCGAGTCAAG
GGCAATCTGTCAACACAATGCAAGGTCAGAATCAAAATCAAGACACATCT
GCGTTTCCACAGCAACAACAGAACCAACCAATCCAACAACAGCATTCTCA
ACCATTATCCCAGAATGCACCACTACCAGCCAATCAAAATCCAATCCCCT
TCACTCCTCAATCCACTAGATGCGGAAAAAAAACATGCACATCCAGTGAA
CTTGGTTTGACAAAGGAGGATTTCTCTTCGACAAACAATGGAAAAGAATC
TGGTTTTGTCAAAACTCATGAAAATATTTTGCCAACATTCTTTAAACCAA
GGATTGAACCCAAGAAGAGACCAGCTACATTAAAAGGTAAACTTTATTAA
AGAAGGTTTTTGTACATTAGGCAAACCTCTGATTCACGATATGCACCATT
GCAATTGCGTATTGATGGATTTTACATCACTTTCAACCAATCAGCTGTTG
GGTCCGTGGAAGACATTGTCCGTGGAAGACATCTAAGTATCTTGCCAAGT
ACTTACATAACATCTTGCTTGCTAGTTCTTTTCAAGATCTTATCAAGAAT
TTTGACCAGTCTGCTTCTTTTCATTGAGATTTTAGAAACGGCTTTTTATT
TTCAGTGAACAAGCCAAAAGAATTGTTCATCGTGCTCGGTGTATCGCACT
CCATGTACTCAAGACTCCATTTCTCTGATCTTTTCAATTATGCACTGGAT
TTGTTTGGACAGTCTCTTGATTACTATGGTTACCAGAGGGCCGCTTTCTT
GACTTTCGGAGGGCCGTCTTATTATTATGTACCATTAACCAATCGAAGTG
AATTCTCAGTGAACAGGTAAAGAAAAAATTTTTACTTGTGTTTTTTTTTT
AATAACCTGTATAATTGCAATGACTTCACAAAACCCTTTTCCTTTTTAAT
GCAGAAAGTATAGTGCTAGGTGCCTGTCTCTCAAATCTTTTGCTAAATAA
TTTACATCAATTACACCTTCTCACAACAGGATCCGATCCCACTGGAGAAA
TTGGCAAAAATATCGTCCTCAGTGGGAAATTATACTCCAATTTTTGTCCC
CACTGAAAATAATCAAATACTGACAAACATTCACTCTAAAATATTATGCT
ATTTTCCCATCCCCAATGAATTTTCTGACTTAAAAACAAAAGAATTTTAA
CCCGCAGCCATAAGAAATAATGGAAAACGGTCCCTATCGAGTTTCCGGTA
TTTCTACCCCCACTGGCTAAAAAAATCCTACTTGGTCTTTGAGAAGGGGG
TGTTCAATTTTAGAGAATAAAGAATTTGGTAATAAAAGATTTTCTTTTTA
TCAACAGAACTTTGAAAGGTTACAGAAATCTGACGTCAGCATTAAATTTT
GTTGTTCAAACAATGGAGCCCCTTAGCAACGGTCGTCGTCAACTAGTCAC
CATCCTCCCTGATCGTTTCAAAAAGACGGACAATCAAGAAGTCGAGAAAG
TGAAAGAAAATTTACAAAAACATGGTAATTTATTTCTTTATATTTAAATG
ATAAAATCCCACTCACAATTGTCTTTTCAACGAGCATAAAAATTGCAATC
TTATTTAAGACTTTTTGGAAAGTTATTCACTTTTGTAATTTTACTAACAG
CTTATTAGTAGCATGCTAAATAACTAATTAGGATATAGTAAAAAATAAAG
AAAAAATGGAAAAGATAAATTCGTCGTTTACATGACTAAAGGTTAAATTT
CAAAATTATTACCTCACAAATTTAGTTTTATTGTGGTTGTCATCTTTGAG
ATTGAGATTGCCCTTTTTTCATGTAGAGGAATACTGTAGTCAATGTTTTC
ATATGACAAAAAGGCCAATCTCAAAGGTAGAACAGAATTGTAAGATTTCC
AATTTTCCAAGACACTGATTTTGAGATTGAACCTTTTAGCCATGTGGACG
ACGAATTGTAGTTTATATACAAACTGATATTATCCCGTAACAATTATTCC
ATTATCATATAACACTCTTATTGCCGACCCAAAAAAATATCAGCGTTTTG
ATTGGTCGAGAGCATCGAGATATTTGCGATATTTCATATTTCTTTAGTCT
GGAAATATGACCGCGTTGACTTTTGGGGGACTGGGTAAGCGGCGGGAGAA
AAATCAAAACAAAACAGCCGAAAAGAACTGACCTGCGGAGAAACTGACTT
GGGAATCAAAAGGTGGAAACGCAACAAAAATATGTTCAGATTAATTTTTA
CTTTGGAGTTCTTCCATAAAAGACACTAAAATCAAATCTGATGANNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNTCGCCTAAAGGCTCGGAAAAATATTACG
GAAAAATCTCGGAACTCGTAAAATATTTCTCGTATTGCACTCGAAGTCAT
GCGATAACTAGTACATATTACTACAATACACGGATAATAAACGCCTCTAG
TCTAGCAGCTAATAATATGACAAAAGACATTGATTAATATATTTGGTCTT
ATACACATTTTTAGGTTTCGAAATGTATTGTGTTGGTGTTGGTAAAAGTT
TCGACAAAGACAAAACCTCCATCAAAATGCTGGCATCTAAACCGATCCAT
GACCACACGATCAAAGCCTCATATAATTCACTTAATAAAACAATGCCATT
GTTGTTCAAGAAATTGTCACTTGGTAAGTGTAGAAAACTGTTGAAAATTA
TTTTCTATGTTCTGTATTCTAGTAACTTCCTACACATTTTCATACAAAAA
TGAAAATACAAAAAATTTTCAAATGAAATACAGCTCAATATGACAATAAT
TTAAAATCGAATATTTTTCTTATCTTACTGTGGCCCATTTGATATACTAC
TACAGTAAACTCTCGCTTATTCGAACTTCTATTATTCGAATCTTTCTATA
ATTCGAACTTATTCCAAGAAGAAACAGTCGTAATATACTTTCTATGTTTC
GAATCTCTCTGTAATTCGAGCAAATAAGATTCGAAGTTCGAGTTCGAATT
AGCGAGAGTCATCTACATTCAAAGAATAATTACCTATTACAAAATTTGTG
CATTTTTCAACTCATAGACCGCTTATACACGAAGACACAAGATAAACACA
AACTCAAAGACCAAGCGAAGCAAATCGGAAAGTTTCGTCATTTCATACCG
AATCAATTTCAAGCATCAAATAACAATAATTTCGTTCGTTCCTATCTACC
AAACGGAGAAGAGTTAAATTTGCGGAATAAACATTTTATAGAGAACAATA
GTTTCGTTCGTTCCCATCTATCAAATGGAGGTGAGGGAAATTTACAGAAT
GAACATTTAATAGAAAGCACTGTACATGCTCCTGATGACGTGGTTAGTGT
GACGTCATCATTCGGCGAAAGTAGTAACAACAATAATGGCANGACGTGGT
TAGTGTGACGTCATCATTCGGCGAAAGTAGTAATAACAATAATGGCGAAC
TCAGAGGGTCACCTGAATCAAATTTACTGCTTTAAAACTTTATTACTTTC
ATTCCTCGAAAGTTAAATTCTAGATAATATTTAGCTTTTTCTTAATTTAG
GAATATATTTATTAATTTTATTTATTTTTGTAGATATCTTTTGGAAATTG
TATTTATTAATAACGTAAAACAAATTTTAAAATTATTAGTTATTGAAAAC
TTTCAACTGGTTTCTTACTTATTATGACAAGGACAATTAACTAAGACCAT
GTTTCGGAACCGTTTCGTTTTGGAACGGAACGGAACCGTGACATCTGAAC
ATGGTCTAAACGTTCAAGACAGTTCCGACTAGAGCTAATGAATACTTTTG
GAAGGTTGGTTTCATTTTGAATATCACGTTGTTAGCCTACAAAATTAGCT
TGTAAAAGTTATACTACTGTAAAAAAACTTAAAATTCTTTTAAAAAAATA
ACCACTATATACAGATTAAAAAAACAAAAAATTAAGACTAACTTATAGAC
GATATCGGCTTCACATGAAAACTTTGAAAACTCAGATTTGACCCCCGAGA
ATTCCCCACAATGCTTTGTACGGAGAAAATTTCACCGTGAACTTTTTTTC
CGCGCAAAGCATTGTGGACAATTTTCGGAGGTCAAATATGAGTTTTCACG
TTAAGCCGATATCATCTATTATTCCACAAAACTTGGGATAATATATTGAT
ACATGTGTTTATCTTGGCTGATGATAAATAAACATTTAGAGATATCATAG
ATTGAAATATTACAGCCGTCCAAAAGTTGAAAGCTCGAACTTTATAAATT
ATACATATTCAAAGCATTTGGTCTTTGGCATTCGGTCAGAAACACCTTTC
CAAAATCAGATTTAATATAAATTTTTGATTGAG
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_003735XLOC_003735Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00006612-exon-sc0000069-1575043694:345206..345522TCONS_00006612-exon-sc0000069-1575043694:345206..345522Clytia hemisphaericaexon
TCONS_00006612-exon-sc0000069-1575043694:344047..344340TCONS_00006612-exon-sc0000069-1575043694:344047..344340Clytia hemisphaericaexon
TCONS_00006612-exon-sc0000069-1575043694:341237..343474TCONS_00006612-exon-sc0000069-1575043694:341237..343474Clytia hemisphaericaexon
TCONS_00006612-exon-sc0000069-1575043694:340757..340967TCONS_00006612-exon-sc0000069-1575043694:340757..340967Clytia hemisphaericaexon
TCONS_00006612-exon-sc0000069-1575043694:340099..340265TCONS_00006612-exon-sc0000069-1575043694:340099..340265Clytia hemisphaericaexon
TCONS_00006612-exon-sc0000069-1575043694:337700..337858TCONS_00006612-exon-sc0000069-1575043694:337700..337858Clytia hemisphaericaexon
TCONS_00006612-exon-sc0000069-1575043694:336040..337305TCONS_00006612-exon-sc0000069-1575043694:336040..337305Clytia hemisphaericaexon
TCONS_00006612-exon-sc0000069-1510915933:345206..345522TCONS_00006612-exon-sc0000069-1510915933:345206..345522Clytia hemisphaericaexon
TCONS_00006612-exon-sc0000069-1510915933:344047..344340TCONS_00006612-exon-sc0000069-1510915933:344047..344340Clytia hemisphaericaexon
TCONS_00006612-exon-sc0000069-1510915933:341237..343474TCONS_00006612-exon-sc0000069-1510915933:341237..343474Clytia hemisphaericaexon
TCONS_00006612-exon-sc0000069-1510915933:340757..340967TCONS_00006612-exon-sc0000069-1510915933:340757..340967Clytia hemisphaericaexon
TCONS_00006612-exon-sc0000069-1510915933:340099..340265TCONS_00006612-exon-sc0000069-1510915933:340099..340265Clytia hemisphaericaexon
TCONS_00006612-exon-sc0000069-1510915933:337700..337858TCONS_00006612-exon-sc0000069-1510915933:337700..337858Clytia hemisphaericaexon
TCONS_00006612-exon-sc0000069-1510915933:336040..337305TCONS_00006612-exon-sc0000069-1510915933:336040..337305Clytia hemisphaericaexon
TCONS_00006612-exon-sc0000069-1491911889:345206..345522TCONS_00006612-exon-sc0000069-1491911889:345206..345522Clytia hemisphaericaexon
TCONS_00006612-exon-sc0000069-1491911889:344047..344340TCONS_00006612-exon-sc0000069-1491911889:344047..344340Clytia hemisphaericaexon
TCONS_00006612-exon-sc0000069-1491911889:341237..343474TCONS_00006612-exon-sc0000069-1491911889:341237..343474Clytia hemisphaericaexon
TCONS_00006612-exon-sc0000069-1491911889:340757..340967TCONS_00006612-exon-sc0000069-1491911889:340757..340967Clytia hemisphaericaexon
TCONS_00006612-exon-sc0000069-1491911889:340099..340265TCONS_00006612-exon-sc0000069-1491911889:340099..340265Clytia hemisphaericaexon
TCONS_00006612-exon-sc0000069-1491911889:337700..337858TCONS_00006612-exon-sc0000069-1491911889:337700..337858Clytia hemisphaericaexon
TCONS_00006612-exon-sc0000069-1491911889:336040..337305TCONS_00006612-exon-sc0000069-1491911889:336040..337305Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000069supercontigsc0000069:336040..345522 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
2.25548	2.05765	0.940193	0.530887	0.261785	0.239557	1.02984	0.981245	0.320971	0.609795	1.36844	0.599666	1.88315	1.55047	1.67876	3.47373	1.78652	1.52878	0.155678	0.139361	2.05352	1.63505	1.82652	1.58463	1.39103	1.85138	0.529327	0.364903	0.52776	0.285309
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00006612 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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