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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00006530 ID=TCONS_00006530|Name=TCONS_00006530|organism=Clytia hemisphaerica|type=transcript|length=1559bp
TTTACATTATGTAAGAACAATACaggattttgaagatttttggtttttat
taaatgttttttgtttatttttcgtttGTTTTAACTTTTACCATTCGCCA
TCGTCATATGGTAAAGGAGCGTCTTGAGCTTCCATCATTAGTTCTTTGTA
GAAGTTGATACGCTCTAGACTCACTTCGGTTGGTCGTTCTTGCATTGGTG
GAATGGCGTTAGGTGGAAGTAAACCGCATTCTTTCAGCTGATTGAACTTC
TTTGAGGAGACGGTTAATTCCACGCCATTCTTATCCGTGAAGGTGATCAA
CTGTTGGCTTGTAGCTTGCCTTTTCAAAGGTGAAGCCACTTCGGTTGGTC
GTTCTTGCGTTGGTGCAATGGCGTTGGGTGGAATCAAACCGCATTCTTTC
AGCTGATTGAACTTCTTTGAAGTGACGGTTAATTCCACGCCATTCTTGTC
TGTGAAGGTGATCAACTGTTGGCTTTTAGCTTGCCTTTTCAAAGGTGAAG
CNattaaatgttttttgtttatttttcgtttGTTTTAACTTTTACCATTC
GCCATCGTCATATGGTAAAGGAGCGTCTTGAGCTTCCATCATTAGTTCTT
TGTAGAAGTTGATACGCTCTAGACTCACTTCGGTTGGTCGTTCTTGCATT
GGTGGAATGGCGTTAGGTGGAAGTAAACCGCATTCTTTCAGCTGATTGAA
CTTCTTTGAGGAGACGGTTAATTCCACGCCATTCTTATCCGTGAAGGTGA
TCAACTGTTGGCTTGTAGCTTGCCTTTTCAAAGGTGAAGCCACTTCGGTT
GGTCGTTCTTGCGTTGGTGCAATGGCGTTGGGTGGAATCAAACCGCTGGC
TTTCAGCTGATTGAACTTCTTTGAAGTGACGGTTAATCCCATGCCATTCT
TGTCCGTGAAGGTGATCAACTGTTGGCTCGTAGCTTGCCTTTTCAAAGGT
GAAGTCACTTCGGTTGGTGGTTCTTGCGTTGGTGCAATGGCGTTGGGTGG
AATCAAACCGCTGGCTTTCAGCTGATTGAACTTCTTTGAAGTGACGGTTA
ATTCCATGCCATTCTTGTCCGTGAAGGTGATCAACTGTTGGCTTGTAGCT
TGCCTTTTCAAAGGTGAAGTCATTTCGGTTGGTCGTTCTTGCGTTGGTGC
AATGGCGTTGGGTGGAATCAAACCGCATTCTTTCAGCTGATTGAATTTCT
TGGAAGAGACGGTTAATTCCACGCCATTCTTATCCGTGAAGGTGATCAAT
GAAGTTGGTTGTCCACAGCTTGCTTTCGTGTTATGAAGTCGAGTTATTCT
CCCCTTGGTATAATTGATTTCTTTACAGAAGTCTTTTTTGGAGGAAGAGT
ATTTTTGTTTCTTGCGtgattttacaattttggttGTTCGTTCCAGAACA
ACTGTTTTAAGCCACTTTTCCTCTTGTTGTCTGCCACATCGGTCTGTTTT
CAATGTTGACAGCATTTTCAAACTTATTATTTCACTTTATAAATACGATA
TAAAATTTTCACGATAATATTATCAGGATCAGTGTCAATTCGGCGTTACG
CTGAAATGG Run BLAST on NCBI transcript from alignment at sc0000067:552542..554100- Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00006530 ID=TCONS_00006530|Name=TCONS_00006530|organism=Clytia hemisphaerica|type=transcript|length=1559bp|location=Sequence derived from alignment at sc0000067:552542..554100- (Clytia hemisphaerica)
TTTACATTATGTAAGAACAATACAGGATTTTGAAGATTTTTGGTTTTTAT
TAAATGTTTTTTGTTTATTTTTCGTTTGTTTTAACTTTTACCATTCGCCA
TCGTCATATGGTAAAGGAGCGTCTTGAGCTTCCATCATTAGTTCTTTGTA
GAAGTTGATACGCTCTAGACTCACTTCGGTTGGTCGTTCTTGCATTGGTG
GAATGGCGTTAGGTGGAAGTAAACCGCATTCTTTCAGCTGATTGAACTTC
TTTGAGGAGACGGTTAATTCCACGCCATTCTTATCCGTGAAGGTGATCAA
CTGTTGGCTTGTAGCTTGCCTTTTCAAAGGTGAAGCCACTTCGGTTGGTC
GTTCTTGCGTTGGTGCAATGGCGTTGGGTGGAATCAAACCGCATTCTTTC
AGCTGATTGAACTTCTTTGAAGTGACGGTTAATTCCACGCCATTCTTGTC
TGTGAAGGTGATCAACTGTTGGCTTTTAGCTTGCCTTTTCAAAGGTGAAG
CNATTAAATGTTTTTTGTTTATTTTTCGTTTGTTTTAACTTTTACCATTC
GCCATCGTCATATGGTAAAGGAGCGTCTTGAGCTTCCATCATTAGTTCTT
TGTAGAAGTTGATACGCTCTAGACTCACTTCGGTTGGTCGTTCTTGCATT
GGTGGAATGGCGTTAGGTGGAAGTAAACCGCATTCTTTCAGCTGATTGAA
CTTCTTTGAGGAGACGGTTAATTCCACGCCATTCTTATCCGTGAAGGTGA
TCAACTGTTGGCTTGTAGCTTGCCTTTTCAAAGGTGAAGCCACTTCGGTT
GGTCGTTCTTGCGTTGGTGCAATGGCGTTGGGTGGAATCAAACCGCTGGC
TTTCAGCTGATTGAACTTCTTTGAAGTGACGGTTAATCCCATGCCATTCT
TGTCCGTGAAGGTGATCAACTGTTGGCTCGTAGCTTGCCTTTTCAAAGGT
GAAGTCACTTCGGTTGGTGGTTCTTGCGTTGGTGCAATGGCGTTGGGTGG
AATCAAACCGCTGGCTTTCAGCTGATTGAACTTCTTTGAAGTGACGGTTA
ATTCCATGCCATTCTTGTCCGTGAAGGTGATCAACTGTTGGCTTGTAGCT
TGCCTTTTCAAAGGTGAAGTCATTTCGGTTGGTCGTTCTTGCGTTGGTGC
AATGGCGTTGGGTGGAATCAAACCGCATTCTTTCAGCTGATTGAATTTCT
TGGAAGAGACGGTTAATTCCACGCCATTCTTATCCGTGAAGGTGATCAAT
GAAGTTGGTTGTCCACAGCTTGCTTTCGTGTTATGAAGTCGAGTTATTCT
CCCCTTGGTATAATTGATTTCTTTACAGAAGTCTTTTTTGGAGGAAGAGT
ATTTTTGTTTCTTGCGTGATTTTACAATTTTGGTTGTTCGTTCCAGAACA
ACTGTTTTAAGCCACTTTTCCTCTTGTTGTCTGCCACATCGGTCTGTTTT
CAATGTTGACAGCATTTTCAAACTTATTATTTCACTTTATAAATACGATA
TAAAATTTTCACGATAATATTATCAGGATCAGTGTCAATTCGGCGTTACG
CTGAAATGG
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00006530-exon-sc0000067-1575043694:552542..554100 | TCONS_00006530-exon-sc0000067-1575043694:552542..554100 | Clytia hemisphaerica | exon |
| TCONS_00006530-exon-sc0000067-1510915933:552542..554100 | TCONS_00006530-exon-sc0000067-1510915933:552542..554100 | Clytia hemisphaerica | exon |
| TCONS_00006530-exon-sc0000067-1491911889:552542..554100 | TCONS_00006530-exon-sc0000067-1491911889:552542..554100 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000067 | supercontig | sc0000067:552542..554100 - |
Blast
The following BLAST results are available for this feature:
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