TCONS_00006500 (transcript) - C. hemisphaerica

Overview
NameTCONS_00006500
Unique NameTCONS_00006500
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length855

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00006500 ID=TCONS_00006500|Name=TCONS_00006500|organism=Clytia hemisphaerica|type=transcript|length=855bp
CCATAaatcactttcacttttcaaGCTTTTCctttgaagcctaaaaacag
aTGATAGATAGACTCCCCTCCACGCCCACAATCACCACTAGCAGCACCAA
CATTACAACCCCACATGAAAAGACAGGAGGAAGACACAGTCAAAAGAAAT
AGAGTTACATTCTGTAATGTGAAGTTCCTAAACAAGCTTCAAAATGGCAT
CTGGGTTTAATTGGAGGTCTGAAGATTTCTCGGAACCTTTTGACCCCAAT
AATTTTGTTGAAAGAATATCTGCAAACATAGATGGTGGAGGTACCAAAGG
AGGTCAGGAAGGTTTCGATCCTGTCAAGCTGAAGAATCATTTCCTAGAAA
CCATCAAGAGTTTGCAGCAACTCAGTGAGAAGACTGATGCACAGATTGTA
AAGCTAGAACAAGTATGCAAAGACCAAgaacaaaaacacaaagaaaatac
TTTGGAAGTTGAAAAACAATACAAGACTGCCATGACTCAGTTCCATGACT
TGGATGACAGAATCAATTCAGTAGCCACAAAAGTGGTTCATTTGGGTGAC
CAATTAGAAAACATTAGTATCCCTCGTCAAAGGGTTCAAGAAACGACACA
AGTCATGAAATATTTCGAGGAATTTCACCCAGGGAAAGAACTATCTCCAA
TATTTAATGACAAAAGCaagCTCCATGAGGCAGCAAATCTGATTTGTCAA
TTGTTGATGGTGGCAGATGAACTCCCCAAAGATCAATTCGAAAGAGTATA
TCGAAAGATTTTAGAGAAATACTCGACAATCGAAAGTGATTTGCAACGTG
AGTTTGTCCACGCATACAAAGATGGTAACTTAGAAGTGATGGCCAAATGC
GCTAA
Run BLAST on NCBI

transcript from alignment at sc0000067:342557..359249-

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00006500 ID=TCONS_00006500|Name=TCONS_00006500|organism=Clytia hemisphaerica|type=transcript|length=16693bp|location=Sequence derived from alignment at sc0000067:342557..359249- (Clytia hemisphaerica)
CCATAAATCACTTTCACTTTTCAAGCTTTTCCTTTGAAGCCTAAAAACAG
ATGATAGATAGACTCCCCTCCACGCCCACAATCACCACTAGCAGCACCAA
CATTACAACCCCACATGAAAAGACAGGAGGAAGACACAGTCAAAAGAAAT
AGAGGTATTCTTTTTCTCTCTTTTAGCTGGTAGCTATTGGCTATAAACTA
TAAGTAAGTAAGTTTGTGTGACACCTCGCTCAGTCAGTTAGGAAAACCAT
CCAGGATCCTGCCATTCTATGAGCCAGCAAAAACTAAATGACACTTGTAA
ACTTAAGTTTCTTACCATTTTCCATCGAAAACAACCAAAAACATTGCTAC
TTCCCAAAGCCGGAGATCAAAACAAATTATCTTCCAAGATTATGGCGCCC
TTTTGGATCTATTGTTAAGGCCATCTAAAATGGTGGAAAGAGTTGCGGAA
AGACAAAGGCGCTCGCTGCGCGTCGAGGGTGGTAAAGCCAAAACGCCCAA
TATGATCTTCCAACAGAAGGCAAGTTAGTTGCCGCGCGAGTTACGTCATG
CACTCCACCGCAGCGCATAACGAAGCGTGTTTAAATGAATATCATTAATT
ATAAGAATAACTTATGTGCTTACTTTCAGTAAACTTTGAGTTCTTCATTG
AAGATGAAGAAGGTAAGAAGATAAAAAATGCACTGGATAATTTTCATTGT
AACAGTTTGATCNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNATACTTACTATGTTTGCTACATCGTCTAGGC
TAAAAAAAGTGCGAAAAGACACGAACGCCATTTTTTATTGAGTGACGTTA
TGATTTTTTTTATTGCGGCTGCGTACAGGAACTCGCCAAATGTTCCTAAC
TGTCAGTGCCATGGCCCCTCCACTTTTTTGCAAAGCAAAATAAAAAATTT
CTCTTCACCTAATGATCTTTTTCTTTTCTGTGCGCGTGCCAATAAAAACG
TTAGAACCTTATGAGGGACGACCCTGCCTATGCCCCGGACAGTCCGGGTT
TTTTTTGATGCGTGTCCGGGGTCCGTATTACCGTGAGAGGTCCTAAAGCC
GACAGCCCAGCNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNTTAATTGACATCTTGACATTACAGCTATCTTGTTAG
ATGTTTTGTTTCGAGAGTTCTAGCAATAGTTTATCGTTCAACTTGGAGAG
GGAATGTTTGTAAACATGGAATTTTTTTTCATAACAGTTATTTGGGGGGT
CGGAATTAGGCTGGGCTGTCGGCTTTAGGACCTCTCACGGTACTTGTTTT
TGAGAGACTACCCCGGACGCCCCAGACAGCCTGCGCGGTCGCTTTTTATA
GAATCGCTGACCGCGCGGGCTTTTTTCGGGGTAAATTTATGGCGCAAAAA
TTGGAGCCCCGGACGTAGGTCCGGGGAAAAAGTTATTTTTTTCAGACCCC
AGACATTTGCCCCGGACTGTCCGGGGCATAGGCAGGGTCGTTATGAGGGG
GGGTTCGGCTCATAATGCATAGCTGTCAACTCTCCCGCATGTCAACGATT
TCTCCCGCGTGAAGAAAATTCTGCCAAATCTCCCGCAATTTTGGGATTTT
CTCCCGCATCTCCCGCATTTCCAAAAATTTTCNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNCCCGATTTCCCGAT
TTTCCGATTTTGAAAAATCGGATTATCGGGGAAAATTTTTCCGACTTGGA
GCTCTCCCGCATTTTTGTGAGGCGAAGTTGACAGCTATGCATAATGCCGG
TCCGGACTAGTCGTTGTGGGTCAGGTCGGCCGCCGACTTTCGAAGGTTGT
CGTGGGGTCGGGGCGGCGCCCTTCGAAAGTCGTCGTGGGTCGGGGCGGCG
CCCTTCGAAAGTCGTCGTGGGTCGGAGCGGCGCCCTTCGAGAGTTGTCGT
CCGACCAGGGAGTCGTTGGGAGGGACATTGTGGGAGCCTCTCTTTCATTT
TATTCGTCCTCAATTTAATCTAATTAATTAGATCTAGTCTTTAAAATATC
TGTCATATTTTTCTCGAGAGTCGTCGTTGGGCCGCCGTCCCTCGAGAGTC
GTCGTTGGTCCGCCGTCCTTCGAGAGTCGTCGTTGGTCCGTCGTCCCTCG
AGAGTCGTCGTTGGTCCGCCGTCCTTCGAGAGTCGTCGTTGGTCCGCCGT
CCTTCGAGAGTCGTCGTTGGTCCGCCGTCCTTCAAGAGTCGTCGTTGGTC
CGCCGTCCCTCGAGAGTCGTCGTTGGTCCGCCGTCCCTCGAGAGTCGTCG
TTGATCCGCCGTTCAAGCCTCCATCAATCTGATGCAAATATTTATAGTTT
AATCAGAAGTTTGAGATTACTAAGTATTTCCAAATTAAATTGGCTAATTT
TTCCTAAAACCTTGTGCCATTTTCTCGTGTTTGATAAAGAATTAGGAAAA
CCTGAAAAAAACCTACAGCTAGCTATAAGCAAAAAGCTTGTACCCAAAAA
TTTTTTAAATGTCAAAAAATGAAGGTCTTCAAATCTCTCTAAAACCTATT
TTTATGGGAAGCTATGGTATTTTGTAGCAAAAAGCAAAAAAAATAGAGCT
TAACCTTGCTTTAGAAATTTTTTATTGCATTTTTTAGGTTTTTGTAAAAC
CGCAGGCCAAAATAGGAGAAAAAATCATCAAGTTTTGCATTTTCTTCTCA
TTGACTTCATTTTTAACCCCTACTTTTAACCATTTTTGAAATCTACATAA
AATTTCCGACAATTTGATATATAACATGCACATGTTCCCGAAAAATCAAC
ATAATAGGCTAAATTNAATGGGTCATTTTTTAGGCCGAAATCCAAAAATA
CCGGAATATTAATTTGAAAATAACCCTATCATGTTATATATCAGTGGAAG
CGGAATTTAGAGTAGATTTTGAATATCCAAGTTTCATGTCCTGAAAAAGA
ACTCAACTCAAATTATTATGCTTTAACAGCTAAAAATAGACATGGGTACA
AGCTTTTTGCTTATGGCTAGCTTCCTATAGTGTAGACTACGATGAGTCAG
TTCAATCACTGCAAAATAAGTTTACCAAAATTGGACANATGATTTGAGGC
TTTCAAATCCATTTTTTCACTGACTAGTACTAGGTCAGAGTTTTTGTCAC
GCCGTGACGGAAAATTTTCAATAGCCTGTAAAAATCTATGATAGTGAAAT
CAGGTCTTAATTTACTCCATGAAACATCAACCATATAGTGTTAATCAGAA
ACCTAAAAAAGAAATTCAAAAATCAACTCACAAGATTTTCTCNAGAATTT
CAATCTCTTCACAATTTGGATGGGTGGGTGGTCCATCAACTCTAATGACG
TGTGATTCACTGATCGCCTTAGTGATAATAAACACTGCGTAAATTATAAG
GCTTGCTTCACTTTTCTTGTCTGAGAAAGGCTAAAAATTCAATTCTAGCC
CTTCGGGCTTATACTTAATTGGTTTTAACAACAACTCTCGAAGGTCGCCG
CACTGTTCGCCGCTCCCAACCACGACTCTCGAAGGTCGCCGCACTGTTCG
CTGTCTCCAACAACGACTCTCGAAGGTCGCCACACTGTTCGCTGTCCCCA
ACCACGACTCTCGAAGGTCGCCGGACTGTTCGCCGTCCCCAACCACAACT
CTCGAAGGTCACCGGGCATTCGCCGTCCCCAACCACAACTCTCACTCTCG
AAGATCGCCGGACTGTTCGCCGTCTCCAACCACGACTCTCGAAGGTCGCC
ACACTGTTCGCTGTCCCCAACCACGACTCTCGAAGGTCGCCGGACTGTTC
GCCGTCCCCAACCACAACTCTCACTCTCGAAGGTCGCCGGACTGTTCGCC
GTCCCCAACCACGACTCTCGAAGGTCGCCGCCCTGTTCGCCGCCCCCAAC
CACGCCTCTCGAAGGTCGCCGGACTGTTCGCCGTCCCCAACCACAACTCT
CGAAGGTCACCGGGCATTCGCCGTCCCCAACCACAACTCTCACTCTCGAA
GGTCGCCGGACTGTTCGCCGTCTCCAACCACGACTCTCGAAGGTCGCCAC
ACTGTTTGCTGTCCCCAACCACGACTCTCGAAGGTCGCCGGGCATTCGCC
GTCCCCAACCACAACTCTCACTCTCGAAGGTCGCCGGACTTTTCGCCGTC
CCCAACCACGACTCTCGAAGGTCGCCGCACTGTTCGGTGGCTCTCGAAGG
GCGGCGTGGGTATAATTAAGTGATATTTTAAGGACCAGCTAGAAAATATT
GAGAAATAGAAGACCAGAAAAAATTGAAAGAGAGGCTCCCACGACGTCCT
GTCCCACGACCACCTGTCCCACGACGACCTTCGAAGGACGCCGCTCCCAC
CCACGACGACTCTCGAGAGTCAGCGCCCCCAACCACGACATCTTTCGACA
GAAAATCAGAACAAAAAGGAAGCTGTTTTAGCCAAATAAGACAGGTCAAA
ATCGAAAATTTTCTGGCCCGTCGGCGCAAACCGGTTGCACCTCCTTAGTC
ACTATATTTTTGTTGGCCCCCTCACTTTCAAAAATTGTGGCGCGGGCCCT
GATTTTTATTCTATCCGAACTAATGTTAAAAAAGACCAAAGAGGTCCTGA
CTGAGTAACGGCTTGTCACTGTGCCGGGTGCATACTCGGCGCCTTGGGGC
CGTAGGGTTGCTAGTAACGGCTCGAATTTCAGTCAGGTTAAAGAAGGTGC
AATTTTACTCATATTATAATAACGTTACCCCCGTCTTTTTTGTCATTCAA
TAAGTATTTCCAAATTTTGTATTCTGCTGTGTGAGTGTGGCTCAACAGAT
AGCACGCTGGGTTTCTGATCAGAAGCTCTTTCATTTGGTGGGTTCGAACC
CCGGTTGGGTCGATAATTCAAGGTCAGTTAATCATTTCCAACTTCAACAG
AATTTATTCAGCTTTCTTTTGCAAAAGAAATTATCAATGATGATAGAATG
TAAAGAGATGGAAAAACAGCTTTTCTGATTACTCAAAGTTCAACGATCAC
TTCTATTGAAAACTCTATTGTAAAAACGTTGATTATTACATTAAATGAAA
GTCCAGAAAAGACGGCTCTCCATACAAATCAGACAGTTTCTACATGATTT
GATGATAAAAATGAAAATTTGTTTTTCCTTTTTTGCCGATTACTAGTTCA
ATTTTTAAGAATAAGGAGCAATATTTTTACCAATGTATATAATATAGCAA
AAGAAATTCTTAACGCAATGATATTAAATTGATCCTTGACTGTCAGAAGT
CGAGTAAAATCAAGATGAAGTTATAATTTTCTCGAGCTGTAGCTTTCCAT
ATTATGGTGCGGTCATGATTCGGTTATATCAGTAGAATCGCTAGGAAATT
CTGAGCAAGAAGATATAGGTACCTTTTCGTATATGAGAGGTGTACCCAAA
ATATAAGCCCTAAAAGTTAGCGCATAATCAGGCTTGAAACAAAAGAATTT
TGTCACAACACGCTAATCATGCAGATTTTTTAAAGCGACAACAAAAGAAA
CCTATTTACTCAACATAAACTCCCTTAAGGGCAAGATAGTAAGTCGCACT
AGGAAATTTAGCTTTCAGAAAAAACAACATCAGTCATCTACAGGATGTAA
TTGTAACAACAAGGATAAGAGTTACCTGAATCAAGTTCGCAAGACAATTA
ATTAAAATTTGAAAGTTTGAAACAAAATAAAACGTGCAGCAACCAAAATC
AACCAACCAAAATTTGTCATTCAATTCCCGAGACAACGCTTCGATTTTTA
AGGCCTAGTTTATACGCTAAAGTAAAAACAATTCCGCACATGTAAATGGG
TCAGTGTTTGAGGTCCGACAAAATTTCTGGGAAATAGCCTATCCGGCAGT
GCGCGGATCTTGGTGAGTTCCGTCTCCTCCGTAGATCTTTTCCTTGGGAA
GTTGATCTTCAAATTAGTTCTCAAGGTTGGCTTGGCTCAAATTATTTCAT
CTGGGTAAAGGCCACATTTTTGGTACACCTGTCCCTTCCGTTACGCTAAA
AAAATTTCATCCTCAAAATTGCTTAAAACCTATTTATTTGGATGTGTATA
TACCTCTATGATGATAATCAAGTATGTGCTCCTCTATATTACCTTTTTGC
AGAACTGTAGGACCCTAGAAGTTGTCGTGGTTGATTTTTTTCTCACTTTC
AACCAATAACTAAAAACTTGTTATTTCTACAAAAAAAGAGACACTTATAA
GACTAAACTTACTCTTAAAATGTTTCTACAAAGTGTTTTAACCAATTCCT
AATCGTTTTTCATGAATTTACATTTTCGGGTTGGAGGGGTAGCCTAATTT
GCGTAACGGAAGGGACAACTTTCAAATTTTTAATTAACATCTTTACTAGA
AAAAAACTTGTTTCAAAAGATAGTTTGAATTTTAATAGTCAAATATGATC
TTTTAACCTAAAATGATAGAACTAACCAAAACTAACTATATAAACTTACA
AATACTCCTAAAAATTGTAAATATTAGTTATAGAATAAGCGTAACGGAAG
GGTCAAAATTTGAAAATAGCTCTGTTTTGGGCCATCCAAGCCTCATCCCA
AGTTTTAGATGATTCCTAAAATTTAGGTGACCCACTGTAGGTGACCCCTG
AAACCGAAAATGTGACTTGCATTTCAGTTTTTCTTTAAAATTTTATATTG
AGCATTCAAAAAAGAAGACNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTTCAAAAAGCATTG
GGTTTATTCCCCTTTAAATCAAGTCCTAGGGAGCTGAGACCCAAGCTTTG
GGACTTGGTATTTTGGCTGTTTCAGGACGCGAAAACACCTCCTATGGAGC
CTAAGGGTTAATGAGACCCCTGGTAAAGATTTTTTTATGGTCAATTAACA
ACTTTGAATAACTCCTAATTGTCATTTTCAGGTATTTTGAGCAGTTTGGA
GTCTTCAAAAATAATCAAAAATTTTTTGGTTAACCCTTTGAGTGCGCCGT
AGTTTTGAAAATTTCAATGATTTTTTTTGAAATTTGAAATTTCAAAATGG
CGTAAAAGCTTGTAGCTTTTGTTTCAGACACTTGTTTTGGTACCAACCAT
TGGAAAGGTAATTTTATACTCTTTCAAAAACATTTGGTTTCTTTGCCTTT
AAATAAAGTCCTAGGGAGATAGGAACCCAGCTTTAGGACCTGGTATTTTG
GCTGTTTCAGGACGCGAAAACGCGTCCTATGGAGCCTAAGGTTTAAGAGA
TAAAAAGAAGTCATTGTAGTGTAGCAAATGTGAGAACAGTCTACAATAGG
TTTTTCAACAATGCAATAACTTCACATATCTTGGCTTTGAAGAAAGAAAC
ACTATAATGAACATCCAAGTCCCTGTAACACTCCCTTTAAAAAAAGGCGT
AACGGAAGGGACAAAACCAAGGCACATTTCCAATGGGAAGGACTGTCAAT
GAAAAAACATGTCAAAAATAGAGGATAATGGTTTGCAAATTGAATTTGGA
GTAATCCCAATGGTAACTTGTGAGAATTTAACATAAACTATAGCTATTTG
ATAAAGATTTTTTTGAAAATGAATTTGCGTAACGGAAGGGACAAGATCAG
AGTCGCAAAACATGCTTTTTAGAAAAATGCAAAACCTGAGCAACAGTGAA
AAAAGTATTTACTTAAAATATTGTGAAAACTCGCTCTATCAATATTAGGT
GGACTGAAAAAAAATTGAAAGTGAATATTTTATCCCAGTTGAAGAAAAAT
AAATTTTGAATCTTATTTTTTTTGCATTTTCGTAGAAAAATGTGAAATTT
AGACTTCTGCAGGGTCTGTAAGAGGAAAGACTGTCCTATTGCTGGCCAAA
CTCTGATTGTAAGGGCACTTTCTACCCCTGATCAATAATCAATTGGAAGT
TTTGCAAGTTTAATGCTAGTTTTCAAGATATGAGCAGTAAAAGTCAAAAG
CGTAACGGAAGGGACAGGTGTACCAAAAATGTGGCCTTTACCCATCTATG
GCTCAAATTTTAGGCAATTTCTCATAGTTTTTGAGAACGTTAATTTCATT
TAAAAGTGCCGGGTTATTTTTCCATGAATCCCTTTAGAAGTTTTGCGGCG
CATTTTTTGCTTGAGAGTCAGGTAAACAATATAGCGCTTTCGCAGCATTA
ATCTTTGATATGCATTTTGGCGGGACGCTAGTGTGACTAACTGCGNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNACAACAAA
TTTGTTTTGATAACTCCACCAAGTTTATCAATCATACTTTCTGTCATAAC
ATGTCACGATAACTTTCACTGATAGCGCGCCCTTTTTAACTTTTTACTTT
CATTAAAAATGACCGGACGCCGATTGGAGAATTAGAGAACCCCTGCCGCC
TAACCGCCTATCGCCCGACAGGATTAATAAATAACGAGTGTGTAACTTGA
CGCGCAAGTGACATCAAACGCTCCATCGTTTTGCCACTAATTTGGTCTTC
TTCGTTCCAGACATGCGCGTGTGTTCGACTACAGATTTTTTTCATATATT
TCAATTTAAAAGCCTACTCGGTGCGAAAGAGAAATCATGTATTTTTTAAT
ACGCCGTTCATTGACCCAAATCAAATGACTTTGGAGGTTCGGTGAAATGG
TGGGAAGGCTCGAAATAACAATTTCAAGTGGGTCGGGCAAAATGTCCGAT
CAGGGTTGCTTTAGCTTGAAAATTATGATTTTTGGGTCGGACATGAAGCC
ATTTGGGTCGGACAATGTCCGATGTCCGACCGTTATTTCGAGCCCTATGG
TGGCCGTCCCATGTTTTGTCAGATAGTCCCAAGTTAGAGCAGTTGACAAT
ACCATTTTCACAGGAGTGATTCTTCAATCTTTGACCATCATCNGTTAGAG
CAGTTGACAATACCATTTTCACAGGAGTGATTCTTCGATCTTTGACCATC
ATCACTGTGAAAAACTTTTTCAAAGATATTCATTCAATCAAAAGATATCA
AACAAAGTTTGTTATTGGTTGTTTGACAAAAGGCTGTTTTTTTGTCGTTT
TTTACTACTTTATAGAGTTCAACCAGCAATAAATTTTGTTTGATATGTTT
TGATTGAATGAATATTTTTGAAAATTTTTTTCACAGTGATGATGATCTAA
GATTGAAGAACCACTCCTGTGAAAATGGTAATCTTAGCACATTTCCACAA
GAAGTTAATTTTTTTTTTCTTCATTTTTCATTTTCACTTTTCATATTTTT
CCAATTTTATTTTGCTTGATAATATTCCACTCACAAATATCTTTTCATAA
CTTTTCGTAACTTGATTTGAATTCTATCAAAAGATACAGCCATTTTTATC
TCAGCTGCAAATTATTTTGAGACAGACTTTAGTGTTTTTTCAAACAACGT
ATTGGAGATAATCAAAGTTTGTCAAAAAATACTGGGTGCTCCATACTCCG
AGGTCCACTTAAAGCTATTTTATAGACTGGATGTTGCAATTTTAAGTGGC
CTGGTAGTATATGGTAATATGCTTTTGCCAGATTTTAGTTGTTCTTGAAA
GGTAAAAATAGAATTGAGAATAAGGGATTGCAAATCTGTTGTTGATGTTT
GTTTCACATTTTTGATTATATTTTTCAACACAACAATTAGCTTTTTTGTT
ATTAGGGTTTTTAACATTTTCTTTCTTTTTTTGTTGAAATGATGCTTTTA
TTCATCAATAGAGTGCTTAACCAACCGCAATCAGAAGCGTGTTATGATAG
TAAAGCAGTGTATCAATACTGACAGTGACAAAAATTTCAACTGAGGATTG
TTTGAATAAGACATGAAACTGTCAGTATTGATCAATTGATTGATACAATA
ATTTTCACTGCTTCAACTATCTTATTACATTTTCTTTCAAAATGGCAACA
TTGTCAAATGCTCCTATTCTACTTGTTCACTGGACTCAGCGCCATTAAAA
ATTATCAATAAACAATGTTTAGCCATCTTGAAGTAGACTTTTGAATACAA
TTTTCTCAAACTCCAGAAGAACTCAGTCAGGAGTAGAAAAAGGTTTCTCT
GATTCAATTTTGCATTGTTATTATTTTAGTTACATTCTGTAATGTGAAGT
TCCTAAACAAGCTTCAAAATGGCATCTGGGTTTAATTGGAGGTCCGAAGA
TTTCTCGGTAAGTCTGAAAATTAACAATTTGAATTTTTTGAAATTCTTAA
AACATTTTTCTAAAGGTGAGAAGGCTTCATAAAGGCCATTTTGCCTTTTT
CTACTGGTATTGGATAAAACAAGATAAACTATAAACTATAAAAAAGTTTA
AGCTGCATGGAAATAGGGCAATTTATTGGATTTTATGGCATTTTGNTTGG
AGGTCTGAAGATTTCTCGGTAAGTCTGAAAATTAACAATTTGAATTTTTT
GAAATTCTTAAAACATTTTTCTAAAGGTGAGAAGGCTTCATAGAGGCCAT
TTTGCCTTTTTCTACTGGTATTGGATAAAACAAGATAAACTATAAACTAT
AAAAAAGTTTAAGCTGCATGGAAATGGGCAATTTATTGGATTTTATGGCT
TATGAAACATTTTCTTAATTGTTATATTGTAGGAACCTTTTGACCCCAAT
AATTTTGTTGAAAGAATATCTGCAAACATAGATGGTGGAGGTACCAAAGG
AGGTCAGGAAGGTTTCGATCCTGTCAAGCTGAAGAATCATTTCCTAGAAA
CCATCAAGAGTTTGCAGCAACTCAGTGAGAAGACTGATGCACAGATTGTA
AAGCTAGAACAAGTATGCAAAGACCAAGAACAAAAACACAAAGAAAATAC
TTTGGAAGTTGAAAAACAATACAAGGTGAGAGAGATATGCTTTCTCATCA
ACCTATATATATTTTGACTTGTTTTTTATTTTGACAATTTTTTTTTTCAC
TCCGAGCCACTAAATCATGATTCAAACAAATAAACAACACCAAAATTTTG
ATTTTATTAAACAAAGCTTTTCGAGTCTTTACTAACTCATTATTAGGTTT
AAAAAAAAATTAACCTGATGATGAGTTAGTAAGACTTGAAAAGCTTTGTT
TTTTTTTAATAAAATCAAAGTTTTAGTGTTGTTTATTTGTTTGAATCTAC
ACAAAGAAACTCAGAAGGAGCAATTGATATTCATAAAACACGACCACTAT
CAGTATTGTCTGAAGGAGTACTTTGTTGACCTGAAATCTTAATTTTTTAC
CATTTCAGACTGCCATGACTCAGTTCCATGACTTGGATGACAGAATCAAT
TCAGTAGCCACAAAAGTGGTTCATTTGGGTGACCAATTAGAAAACATTAG
TATCCCTCGTCAAAGGGTTCAAGAAACGACACAAGTCATGAAATATTTCG
AGGAATTTCACCCAGGGAAAGAACTATCTCCAATATTTAATGACAAAAGC
AAGGTATTTTGATTTTTTTCTGAACAATTCTTGAAGGGTATGAATTATTC
AATATGTACTAGTTATCGCATGACTTCGAGTGCAATACGAGAAATATTTT
ACGAGTTCCGAGATTTTTCCGTAATATTTTTCCGAGCCTTTAGGCGAGGA
AAAATATCGGTAAAATCTCGGAACGAGTAAATTATTNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTCTTTGTTCATCAGATT
TGATTTTAGTGTCTTTTATGGAAGAACTCCAAAGTAAAAGTTAATCTGAA
CATATTTTTGTTGCGTTTTTCCCTTTGATTCCCAGCAGTTCCCAGCCAAG
TCCTGTATTGTTTTGATTTTTCTCCCGCCGCTTACCCAGTCCCCCAAAGT
CAACGCGGTCATATTTCCAGACTAAAGAAATATGAAATATCGCAAATATC
TCGATGCTCTCGACCAATCAAAAAGCTGATATTTTTTTGGGTCGGCAATA
ATAGTTTTTATGAGAAGCAGGTCTTTTTACCATGAAAGTTAAAAGCTCAA
ACCCACAACCTTCTGCTAAGGCAAATTATTTTATCTCAATAAAGCTATCA
ACCCTTAGTGAGGTGGTCCTCTTTTTTGGGGACTGGTAATAAATTTACAT
TTTTAGATCAATTTCTAATTTCCTAATTTCTATAGTGCAAACTATTTTTA
GCATTTGAATAAGTTTAAAAGTATATCGACATTACTCAATACTTTATTGC
TTCAATGCAAGGGTATGTTACAATTTTCACAAGAGCACTTCTATACTTGT
GTTTTGGATGCTGTCGTCGAAAAGAATTTTCCTTGCTTTTTCGTTACCAG
TCTCCTCAAAAGATAGTTGTATTCAATGTTAATACCTAGCTAGCACAAGA
TATGATTATTTTAGCGCAATATTGCCCTAGGGATACTACATAAGTCAATT
GTATTTGAAAGAAGGAAATCTATTTTGTCTTTAGCTCCATGAGGCAGCAA
ATCTGATTTGTCAATTGTTGATGGTGGCAGATGAACTCCCCAAAGATCAG
TAAGTCCGTTAATCACCGGCTTTATACCCTTTATACCCTTATACAAGGAT
TTATACCCCGTTTATACCTATGTGTCAGGAATAATGCTTTCTGTTTTACA
ATAAGATTGACTCCTGTTGCAGTCGCTTATAATTCCAGTTACTTTCATTT
ATTTTCATTTTGTCTCTTTTTTATAGATTCGAAAGAGTATATCGAAAGAT
TTTAGGTAGGTACAGGGTCACCTGGAAAGAAATATGAAATGTGCCGATGT
GTTTACACCCTCTAAAAAATGAACTGCGGCTTGTTTTTTTGAATATCAAA
ACTCTAAAGTACATCAAATATCTTTGTGTTTCAACCAGATGGTTGGTGTT
ATATGCTACTAAGATGATAATTATTTAGGAAAGGGTAAAGGGTAGTCAAG
TCGATAATGTATGAACTATATACTTAGTCCTTTACTTTTCCTTACCTACC
CTAATAAATTTAGCCGTGTAGCATGCTAGTTTATCACTTATTTTTATTGT
GCTTACAAACTAGTTTTCATTTTGTAGGGTTTGATTATTGTCATTGGGCT
TAAACTAATCTATTTTTGGAAGTTTTATGACCAATCCATCCCTGATATTG
ATAGGGAAAAGATTGCATCAGATTATCGTTATTGCTCTTCTTTTCTCTTC
AGAGAAATACTCGACAATCGAAAGTGATTTGCAACGTGAGTTTGTCCACG
CATACAAAGATGGTAACTTAGAAGTGATGGCCAAATGCGCTAA
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_003687XLOC_003687Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00006500-exon-sc0000067-1575043694:359096..359249TCONS_00006500-exon-sc0000067-1575043694:359096..359249Clytia hemisphaericaexon
TCONS_00006500-exon-sc0000067-1575043694:345859..345920TCONS_00006500-exon-sc0000067-1575043694:345859..345920Clytia hemisphaericaexon
TCONS_00006500-exon-sc0000067-1575043694:345632..345647TCONS_00006500-exon-sc0000067-1575043694:345632..345647Clytia hemisphaericaexon
TCONS_00006500-exon-sc0000067-1575043694:345175..345417TCONS_00006500-exon-sc0000067-1575043694:345175..345417Clytia hemisphaericaexon
TCONS_00006500-exon-sc0000067-1575043694:344597..344791TCONS_00006500-exon-sc0000067-1575043694:344597..344791Clytia hemisphaericaexon
TCONS_00006500-exon-sc0000067-1575043694:343301..343365TCONS_00006500-exon-sc0000067-1575043694:343301..343365Clytia hemisphaericaexon
TCONS_00006500-exon-sc0000067-1575043694:343095..343123TCONS_00006500-exon-sc0000067-1575043694:343095..343123Clytia hemisphaericaexon
TCONS_00006500-exon-sc0000067-1575043694:342557..342647TCONS_00006500-exon-sc0000067-1575043694:342557..342647Clytia hemisphaericaexon
TCONS_00006500-exon-sc0000067-1510915933:359096..359249TCONS_00006500-exon-sc0000067-1510915933:359096..359249Clytia hemisphaericaexon
TCONS_00006500-exon-sc0000067-1510915933:345859..345920TCONS_00006500-exon-sc0000067-1510915933:345859..345920Clytia hemisphaericaexon
TCONS_00006500-exon-sc0000067-1510915933:345632..345647TCONS_00006500-exon-sc0000067-1510915933:345632..345647Clytia hemisphaericaexon
TCONS_00006500-exon-sc0000067-1510915933:345175..345417TCONS_00006500-exon-sc0000067-1510915933:345175..345417Clytia hemisphaericaexon
TCONS_00006500-exon-sc0000067-1510915933:344597..344791TCONS_00006500-exon-sc0000067-1510915933:344597..344791Clytia hemisphaericaexon
TCONS_00006500-exon-sc0000067-1510915933:343301..343365TCONS_00006500-exon-sc0000067-1510915933:343301..343365Clytia hemisphaericaexon
TCONS_00006500-exon-sc0000067-1510915933:343095..343123TCONS_00006500-exon-sc0000067-1510915933:343095..343123Clytia hemisphaericaexon
TCONS_00006500-exon-sc0000067-1510915933:342557..342647TCONS_00006500-exon-sc0000067-1510915933:342557..342647Clytia hemisphaericaexon
TCONS_00006500-exon-sc0000067-1491911889:359096..359249TCONS_00006500-exon-sc0000067-1491911889:359096..359249Clytia hemisphaericaexon
TCONS_00006500-exon-sc0000067-1491911889:345859..345920TCONS_00006500-exon-sc0000067-1491911889:345859..345920Clytia hemisphaericaexon
TCONS_00006500-exon-sc0000067-1491911889:345632..345647TCONS_00006500-exon-sc0000067-1491911889:345632..345647Clytia hemisphaericaexon
TCONS_00006500-exon-sc0000067-1491911889:345175..345417TCONS_00006500-exon-sc0000067-1491911889:345175..345417Clytia hemisphaericaexon
TCONS_00006500-exon-sc0000067-1491911889:344597..344791TCONS_00006500-exon-sc0000067-1491911889:344597..344791Clytia hemisphaericaexon
TCONS_00006500-exon-sc0000067-1491911889:343301..343365TCONS_00006500-exon-sc0000067-1491911889:343301..343365Clytia hemisphaericaexon
TCONS_00006500-exon-sc0000067-1491911889:343095..343123TCONS_00006500-exon-sc0000067-1491911889:343095..343123Clytia hemisphaericaexon
TCONS_00006500-exon-sc0000067-1491911889:342557..342647TCONS_00006500-exon-sc0000067-1491911889:342557..342647Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000067supercontigsc0000067:342557..359249 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
Sort Descending | Sort Ascending | Only Non-Zero Values | Tile/Chart | Reset | Show/Hide Values

Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
15.1864	14.5644	11.96	8.67984	23.3191	25.7651	16.9175	21.0162	0	9.43118	7.12625	3.60581	5.658	7.78997	6.36843	6.90227	14.5647	7.09526	8.74356	5.10906	14.6929	10.6137	12.9784	16.0876	11.3601	11.5886	15.3055	16.73	13.6616	10.574
Blast
[Close]
BLAST of TCONS_00006500 vs. Swiss-Prot (Human)
Match: EXOC5 (Exocyst complex component 5 OS=Homo sapiens GN=EXOC5 PE=1 SV=1)

HSP 1 Score: 164.466 bits (415), Expect = 9.062e-46
Identity = 85/212 (40.09%), Postives = 129/212 (60.85%), Query Frame = 2 
Query:  218 SEDFSEPFDPNNFVERISANIDGGGTKGGQEGFDPVKLKNHFLETIKSLQQLSEKTDAQIVKLEQVCKDQEQKHKENTLEVEKQYKTAMTQFHDLDDRINSVATKVVHLGDQLENISIPRQRVQETTQVMKYFEEFHPGKELSPIFNDKSKLHEAANLICQLLMVADELPKDQFERVYRKILEKYSTIESDLQREFVHAYKDGNLEVMAKCA 853
            +E F EPF  + ++ER+     GGG++GG E FDP +L   F+  I+ LQ + E+   ++ KLEQ C+ + ++  +   E++K  + A   F +LD+ I+ VATKV HLGDQLE ++ PRQR  E  ++MKYF EF  G+  S +F +  K+ EAA++I +L ++A ELP D+F  V  KI  KY  +E  L +EF  A + G +  M + A
Sbjct:    5 AELFEEPFVADEYIERLVWRTPGGGSRGGPEAFDPKRLLEEFVNHIQELQIMDERIQRKVEKLEQQCQKEAKEFAKKVQELQKSNQVAFQHFQELDEHISYVATKVCHLGDQLEGVNTPRQRAVEAQKLMKYFNEFLDGELKSDVFTNSEKIKEAADIIQKLHLIAQELPFDRFSEVKSKIASKYHDLECQLIQEFTSAQRRGEISRMREVA 216
The following BLAST results are available for this feature:
BLAST of TCONS_00006500 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
EXOC59.062e-4640.09Exocyst complex component 5 OS=Homo sapiens GN=EXO... [more]
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